-
1
-
-
84938746255
-
Efficient virus-mediated genome editing in plants using the CRISPR/Cas9 system
-
Ali, Z., Abul-Faraj, A., Li, L., Ghosh, N., Piatek, M., Mahjoub, A., Aouida, M., Piatek, A., Baltes, N.J., Voytas, D.F., et al. Efficient virus-mediated genome editing in plants using the CRISPR/Cas9 system. Mol. Plant 8 (2015), 1288–1291.
-
(2015)
Mol. Plant
, vol.8
, pp. 1288-1291
-
-
Ali, Z.1
Abul-Faraj, A.2
Li, L.3
Ghosh, N.4
Piatek, M.5
Mahjoub, A.6
Aouida, M.7
Piatek, A.8
Baltes, N.J.9
Voytas, D.F.10
-
2
-
-
84946745735
-
CRISPR/Cas9-mediated viral interference in plants
-
Ali, Z., Abulfaraj, A., Idris, A., Ali, S., Tashkandi, M., Mahfouz, M.M., CRISPR/Cas9-mediated viral interference in plants. Genome Biol., 16, 2015, 238.
-
(2015)
Genome Biol.
, vol.16
, pp. 238
-
-
Ali, Z.1
Abulfaraj, A.2
Idris, A.3
Ali, S.4
Tashkandi, M.5
Mahfouz, M.M.6
-
3
-
-
85009919974
-
Conferring resistance to geminiviruses with the CRISPR-Cas prokaryotic immune system
-
Baltes, N.J., Hummel, A.W., Konecna, E., Cegan, R., Bruns, A.N., Bisaro, D.M., Voytas, D.F., Conferring resistance to geminiviruses with the CRISPR-Cas prokaryotic immune system. Nat. Plants, 1, 2015, 15145.
-
(2015)
Nat. Plants
, vol.1
, pp. 15145
-
-
Baltes, N.J.1
Hummel, A.W.2
Konecna, E.3
Cegan, R.4
Bruns, A.N.5
Bisaro, D.M.6
Voytas, D.F.7
-
4
-
-
0033119713
-
Fast forward genetics based on virus-induced gene silencing
-
Baulcombe, D.C., Fast forward genetics based on virus-induced gene silencing. Curr. Opin. Plant Biol. 2 (1999), 109–113.
-
(1999)
Curr. Opin. Plant Biol.
, vol.2
, pp. 109-113
-
-
Baulcombe, D.C.1
-
5
-
-
84931846154
-
Editing plant genomes with CRISPR/Cas9
-
Belhaj, K., Chaparro-Garcia, A., Kamoun, S., Patron, N.J., Nekrasov, V., Editing plant genomes with CRISPR/Cas9. Curr. Opin. Biotechnol. 32 (2015), 76–84.
-
(2015)
Curr. Opin. Biotechnol.
, vol.32
, pp. 76-84
-
-
Belhaj, K.1
Chaparro-Garcia, A.2
Kamoun, S.3
Patron, N.J.4
Nekrasov, V.5
-
6
-
-
0036021389
-
Targeted chromosomal cleavage and mutagenesis in Drosophila using zinc-finger nucleases
-
Bibikova, M., Golic, M., Golic, K.G., Carroll, D., Targeted chromosomal cleavage and mutagenesis in Drosophila using zinc-finger nucleases. Genetics 161 (2002), 1169–1175.
-
(2002)
Genetics
, vol.161
, pp. 1169-1175
-
-
Bibikova, M.1
Golic, M.2
Golic, K.G.3
Carroll, D.4
-
7
-
-
77956126894
-
Xanthomonas AvrBs3 family-type III effectors: discovery and function
-
Boch, J., Bonas, U., Xanthomonas AvrBs3 family-type III effectors: discovery and function. Annu. Rev. Phytopathol. 48 (2010), 419–436.
-
(2010)
Annu. Rev. Phytopathol.
, vol.48
, pp. 419-436
-
-
Boch, J.1
Bonas, U.2
-
8
-
-
72149110399
-
Breaking the code of DNA binding specificity of TAL-type III effectors
-
Boch, J., Scholze, H., Schornack, S., Landgraf, A., Hahn, S., Kay, S., Lahaye, T., Nickstadt, A., Bonas, U., Breaking the code of DNA binding specificity of TAL-type III effectors. Science 326 (2009), 1509–1512.
-
(2009)
Science
, vol.326
, pp. 1509-1512
-
-
Boch, J.1
Scholze, H.2
Schornack, S.3
Landgraf, A.4
Hahn, S.5
Kay, S.6
Lahaye, T.7
Nickstadt, A.8
Bonas, U.9
-
9
-
-
84920262090
-
The CRISPR/Cas9 system for plant genome editing and beyond
-
Bortesi, L., Fischer, R., The CRISPR/Cas9 system for plant genome editing and beyond. Biotechnol. Adv. 33 (2015), 41–52.
-
(2015)
Biotechnol. Adv.
, vol.33
, pp. 41-52
-
-
Bortesi, L.1
Fischer, R.2
-
10
-
-
84908584019
-
Efficient gene editing in tomato in the first generation using the clustered regularly interspaced short palindromic repeats/CRISPR-associated9 system
-
Brooks, C., Nekrasov, V., Lippman, Z.B., Van Eck, J., Efficient gene editing in tomato in the first generation using the clustered regularly interspaced short palindromic repeats/CRISPR-associated9 system. Plant Physiol. 166 (2014), 1292–1297.
-
(2014)
Plant Physiol.
, vol.166
, pp. 1292-1297
-
-
Brooks, C.1
Nekrasov, V.2
Lippman, Z.B.3
Van Eck, J.4
-
11
-
-
84946416320
-
High-frequency, precise modification of the tomato genome
-
Cermak, T., Baltes, N.J., Cegan, R., Zhang, Y., Voytas, D.F., High-frequency, precise modification of the tomato genome. Genome Biol., 16, 2015, 232.
-
(2015)
Genome Biol.
, vol.16
, pp. 232
-
-
Cermak, T.1
Baltes, N.J.2
Cegan, R.3
Zhang, Y.4
Voytas, D.F.5
-
12
-
-
84947776272
-
Boosting plant immunity with CRISPR/Cas
-
Chaparro-Garcia, A., Kamoun, S., Nekrasov, V., Boosting plant immunity with CRISPR/Cas. Genome Biol., 16, 2015, 254.
-
(2015)
Genome Biol.
, vol.16
, pp. 254
-
-
Chaparro-Garcia, A.1
Kamoun, S.2
Nekrasov, V.3
-
13
-
-
84894063115
-
Dynamic imaging of genomic loci in living human cells by an optimized CRISPR/Cas system
-
Chen, B., Gilbert, L.A., Cimini, B.A., Schnitzbauer, J., Zhang, W., Li, G.W., Park, J., Blackburn, E.H., Weissman, J.S., Qi, L.S., et al. Dynamic imaging of genomic loci in living human cells by an optimized CRISPR/Cas system. Cell 155 (2013), 1479–1491.
-
(2013)
Cell
, vol.155
, pp. 1479-1491
-
-
Chen, B.1
Gilbert, L.A.2
Cimini, B.A.3
Schnitzbauer, J.4
Zhang, W.5
Li, G.W.6
Park, J.7
Blackburn, E.H.8
Weissman, J.S.9
Qi, L.S.10
-
14
-
-
78951479577
-
Targeting DNA double-strand breaks with TAL effector nucleases
-
Christian, M., Cermak, T., Doyle, E.L., Schmidt, C., Zhang, F., Hummel, A., Bogdanove, A.J., Voytas, D.F., Targeting DNA double-strand breaks with TAL effector nucleases. Genetics 186 (2010), 757–761.
-
(2010)
Genetics
, vol.186
, pp. 757-761
-
-
Christian, M.1
Cermak, T.2
Doyle, E.L.3
Schmidt, C.4
Zhang, F.5
Hummel, A.6
Bogdanove, A.J.7
Voytas, D.F.8
-
15
-
-
84873729095
-
Multiplex genome engineering using CRISPR/Cas systems
-
Cong, L., Ran, F.A., Cox, D., Lin, S., Barretto, R., Habib, N., Hsu, P.D., Wu, X., Jiang, W., Marraffini, L.A., et al. Multiplex genome engineering using CRISPR/Cas systems. Science 339 (2013), 819–823.
-
(2013)
Science
, vol.339
, pp. 819-823
-
-
Cong, L.1
Ran, F.A.2
Cox, D.3
Lin, S.4
Barretto, R.5
Habib, N.6
Hsu, P.D.7
Wu, X.8
Jiang, W.9
Marraffini, L.A.10
-
16
-
-
84866156176
-
Simple methods for generating and detecting locus-specific mutations induced with TALENs in the zebrafish genome
-
Dahlem, T.J., Hoshijima, K., Jurynec, M.J., Gunther, D., Starker, C.G., Locke, A.S., Weis, A.M., Voytas, D.F., Grunwald, D.J., Simple methods for generating and detecting locus-specific mutations induced with TALENs in the zebrafish genome. PLoS Genet., 8, 2012, e1002861.
-
(2012)
PLoS Genet.
, vol.8
, pp. e1002861
-
-
Dahlem, T.J.1
Hoshijima, K.2
Jurynec, M.J.3
Gunther, D.4
Starker, C.G.5
Locke, A.S.6
Weis, A.M.7
Voytas, D.F.8
Grunwald, D.J.9
-
17
-
-
84952636633
-
Optimizing sgRNA structure to improve CRISPR-Cas9 knockout efficiency
-
Dang, Y., Jia, G., Choi, J., Ma, H., Anaya, E., Ye, C., Shankar, P., Wu, H., Optimizing sgRNA structure to improve CRISPR-Cas9 knockout efficiency. Genome Biol., 16, 2015, 280.
-
(2015)
Genome Biol.
, vol.16
, pp. 280
-
-
Dang, Y.1
Jia, G.2
Choi, J.3
Ma, H.4
Anaya, E.5
Ye, C.6
Shankar, P.7
Wu, H.8
-
18
-
-
0033941146
-
Female reproductive tissues are the primary target of Agrobacterium-mediated transformation by the Arabidopsis floral-dip method
-
Desfeux, C., Clough, S.J., Bent, A.F., Female reproductive tissues are the primary target of Agrobacterium-mediated transformation by the Arabidopsis floral-dip method. Plant Physiol. 123 (2000), 895–904.
-
(2000)
Plant Physiol.
, vol.123
, pp. 895-904
-
-
Desfeux, C.1
Clough, S.J.2
Bent, A.F.3
-
19
-
-
84913594397
-
Genome editing. The new frontier of genome engineering with CRISPR-Cas9
-
Doudna, J.A., Charpentier, E., Genome editing. The new frontier of genome engineering with CRISPR-Cas9. Science, 346, 2014, 1258096.
-
(2014)
Science
, vol.346
, pp. 1258096
-
-
Doudna, J.A.1
Charpentier, E.2
-
20
-
-
84956760665
-
Biallelic gene targeting in rice
-
Endo, M., Mikami, M., Toki, S., Biallelic gene targeting in rice. Plant Physiol. 170 (2016), 667–677.
-
(2016)
Plant Physiol.
, vol.170
, pp. 667-677
-
-
Endo, M.1
Mikami, M.2
Toki, S.3
-
21
-
-
56649114274
-
A one pot, one step, precision cloning method with high throughput capability
-
Engler, C., Kandzia, R., Marillonnet, S., A one pot, one step, precision cloning method with high throughput capability. PLoS One, 3, 2008, e3647.
-
(2008)
PLoS One
, vol.3
, pp. e3647
-
-
Engler, C.1
Kandzia, R.2
Marillonnet, S.3
-
22
-
-
84937702694
-
Efficient CRISPR/Cas9-mediated targeted mutagenesis in Populus in the first generation
-
Fan, D., Liu, T., Li, C., Jiao, B., Li, S., Hou, Y., Luo, K., Efficient CRISPR/Cas9-mediated targeted mutagenesis in Populus in the first generation. Sci. Rep., 5, 2015, 12217.
-
(2015)
Sci. Rep.
, vol.5
, pp. 12217
-
-
Fan, D.1
Liu, T.2
Li, C.3
Jiao, B.4
Li, S.5
Hou, Y.6
Luo, K.7
-
23
-
-
84904068340
-
Both CRISPR/Cas-based nucleases and nickases can be used efficiently for genome engineering in Arabidopsis thaliana
-
Fauser, F., Schiml, S., Puchta, H., Both CRISPR/Cas-based nucleases and nickases can be used efficiently for genome engineering in Arabidopsis thaliana. Plant J. 79 (2014), 348–359.
-
(2014)
Plant J.
, vol.79
, pp. 348-359
-
-
Fauser, F.1
Schiml, S.2
Puchta, H.3
-
24
-
-
84896924524
-
Multigeneration analysis reveals the inheritance, specificity, and patterns of CRISPR/Cas-induced gene modifications in Arabidopsis
-
Feng, Z., Mao, Y., Xu, N., Zhang, B., Wei, P., Yang, D.L., Wang, Z., Zhang, Z., Zheng, R., Yang, L., et al. Multigeneration analysis reveals the inheritance, specificity, and patterns of CRISPR/Cas-induced gene modifications in Arabidopsis. Proc. Natl. Acad. Sci. USA 111 (2014), 4632–4637.
-
(2014)
Proc. Natl. Acad. Sci. USA
, vol.111
, pp. 4632-4637
-
-
Feng, Z.1
Mao, Y.2
Xu, N.3
Zhang, B.4
Wei, P.5
Yang, D.L.6
Wang, Z.7
Zhang, Z.8
Zheng, R.9
Yang, L.10
-
25
-
-
84880570576
-
High-frequency off-target mutagenesis induced by CRISPR-Cas nucleases in human cells
-
Fu, Y., Foden, J.A., Khayter, C., Maeder, M.L., Reyon, D., Joung, J.K., Sander, J.D., High-frequency off-target mutagenesis induced by CRISPR-Cas nucleases in human cells. Nat. Biotechnol. 31 (2013), 822–826.
-
(2013)
Nat. Biotechnol.
, vol.31
, pp. 822-826
-
-
Fu, Y.1
Foden, J.A.2
Khayter, C.3
Maeder, M.L.4
Reyon, D.5
Joung, J.K.6
Sander, J.D.7
-
26
-
-
84897546295
-
Self-processing of ribozyme-flanked RNAs into guide RNAs in vitro and in vivo for CRISPR-mediated genome editing
-
Gao, Y., Zhao, Y., Self-processing of ribozyme-flanked RNAs into guide RNAs in vitro and in vivo for CRISPR-mediated genome editing. J. Integr. Plant Biol. 56 (2014), 343–349.
-
(2014)
J. Integr. Plant Biol.
, vol.56
, pp. 343-349
-
-
Gao, Y.1
Zhao, Y.2
-
27
-
-
84919838986
-
CRISPR/Cas9-mediated targeted mutagenesis in Nicotiana tabacum
-
Gao, J., Wang, G., Ma, S., Xie, X., Wu, X., Zhang, X., Wu, Y., Zhao, P., Xia, Q., CRISPR/Cas9-mediated targeted mutagenesis in Nicotiana tabacum. Plant Mol. Biol. 87 (2015), 99–110.
-
(2015)
Plant Mol. Biol.
, vol.87
, pp. 99-110
-
-
Gao, J.1
Wang, G.2
Ma, S.3
Xie, X.4
Wu, X.5
Zhang, X.6
Wu, Y.7
Zhao, P.8
Xia, Q.9
-
28
-
-
84923164523
-
Auxin binding protein 1 (ABP1) is not required for either auxin signaling or Arabidopsis development
-
Gao, Y., Zhang, Y., Zhang, D., Dai, X., Estelle, M., Zhao, Y., Auxin binding protein 1 (ABP1) is not required for either auxin signaling or Arabidopsis development. Proc. Natl. Acad. Sci. USA 112 (2015), 2275–2280.
-
(2015)
Proc. Natl. Acad. Sci. USA
, vol.112
, pp. 2275-2280
-
-
Gao, Y.1
Zhang, Y.2
Zhang, D.3
Dai, X.4
Estelle, M.5
Zhao, Y.6
-
29
-
-
67349270900
-
Enzymatic assembly of DNA molecules up to several hundred kilobases
-
Gibson, D.G., Young, L., Chuang, R.Y., Venter, J.C., Hutchison, C.A. 3rd, Smith, H.O., Enzymatic assembly of DNA molecules up to several hundred kilobases. Nat. Methods 6 (2009), 343–345.
-
(2009)
Nat. Methods
, vol.6
, pp. 343-345
-
-
Gibson, D.G.1
Young, L.2
Chuang, R.Y.3
Venter, J.C.4
Hutchison, C.A.5
Smith, H.O.6
-
30
-
-
84880571335
-
CRISPR-mediated modular RNA-guided regulation of transcription in eukaryotes
-
Gilbert, L.A., Larson, M.H., Morsut, L., Liu, Z., Brar, G.A., Torres, S.E., Stern-Ginossar, N., Brandman, O., Whitehead, E.H., Doudna, J.A., et al. CRISPR-mediated modular RNA-guided regulation of transcription in eukaryotes. Cell 154 (2013), 442–451.
-
(2013)
Cell
, vol.154
, pp. 442-451
-
-
Gilbert, L.A.1
Larson, M.H.2
Morsut, L.3
Liu, Z.4
Brar, G.A.5
Torres, S.E.6
Stern-Ginossar, N.7
Brandman, O.8
Whitehead, E.H.9
Doudna, J.A.10
-
31
-
-
77957754251
-
A rapid and general assay for monitoring endogenous gene modification
-
Guschin, D.Y., Waite, A.J., Katibah, G.E., Miller, J.C., Holmes, M.C., Rebar, E.J., A rapid and general assay for monitoring endogenous gene modification. Methods Mol. Biol. 649 (2010), 247–256.
-
(2010)
Methods Mol. Biol.
, vol.649
, pp. 247-256
-
-
Guschin, D.Y.1
Waite, A.J.2
Katibah, G.E.3
Miller, J.C.4
Holmes, M.C.5
Rebar, E.J.6
-
32
-
-
43149106949
-
Agrobacterium-mediated transformation of rice using immature embryos or calli induced from mature seed
-
Hiei, Y., Komari, T., Agrobacterium-mediated transformation of rice using immature embryos or calli induced from mature seed. Nat. Protoc. 3 (2008), 824–834.
-
(2008)
Nat. Protoc.
, vol.3
, pp. 824-834
-
-
Hiei, Y.1
Komari, T.2
-
33
-
-
84929135130
-
Epigenome editing by a CRISPR-Cas9-based acetyltransferase activates genes from promoters and enhancers
-
Hilton, I.B., D'Ippolito, A.M., Vockley, C.M., Thakore, P.I., Crawford, G.E., Reddy, T.E., Gersbach, C.A., Epigenome editing by a CRISPR-Cas9-based acetyltransferase activates genes from promoters and enhancers. Nat. Biotechnol. 33 (2015), 510–517.
-
(2015)
Nat. Biotechnol.
, vol.33
, pp. 510-517
-
-
Hilton, I.B.1
D'Ippolito, A.M.2
Vockley, C.M.3
Thakore, P.I.4
Crawford, G.E.5
Reddy, T.E.6
Gersbach, C.A.7
-
34
-
-
84884165315
-
DNA targeting specificity of RNA-guided Cas9 nucleases
-
Hsu, P.D., Scott, D.A., Weinstein, J.A., Ran, F.A., Konermann, S., Agarwala, V., Li, Y., Fine, E.J., Wu, X., Shalem, O., et al. DNA targeting specificity of RNA-guided Cas9 nucleases. Nat. Biotechnol. 31 (2013), 827–832.
-
(2013)
Nat. Biotechnol.
, vol.31
, pp. 827-832
-
-
Hsu, P.D.1
Scott, D.A.2
Weinstein, J.A.3
Ran, F.A.4
Konermann, S.5
Agarwala, V.6
Li, Y.7
Fine, E.J.8
Wu, X.9
Shalem, O.10
-
35
-
-
84965006411
-
Expanding the range of CRISPR/Cas9 genome editing in rice
-
Hu, X., Wang, C., Fu, Y., Liu, Q., Jiao, X., Wang, K., Expanding the range of CRISPR/Cas9 genome editing in rice. Mol. Plant, 2016, 10.1016/j.molp.2016.03.003.
-
(2016)
Mol. Plant
-
-
Hu, X.1
Wang, C.2
Fu, Y.3
Liu, Q.4
Jiao, X.5
Wang, K.6
-
36
-
-
84920435758
-
Site-directed mutagenesis in Arabidopsis thaliana using dividing tissue-targeted RGEN of the CRISPR/Cas system to generate heritable null alleles
-
Hyun, Y., Kim, J., Cho, S.W., Choi, Y., Kim, J.S., Coupland, G., Site-directed mutagenesis in Arabidopsis thaliana using dividing tissue-targeted RGEN of the CRISPR/Cas system to generate heritable null alleles. Planta 241 (2015), 271–284.
-
(2015)
Planta
, vol.241
, pp. 271-284
-
-
Hyun, Y.1
Kim, J.2
Cho, S.W.3
Choi, Y.4
Kim, J.S.5
Coupland, G.6
-
37
-
-
84947775797
-
Establishing a CRISPR-Cas-like immune system conferring DNA virus resistance in plants
-
Ji, X., Zhang, H.W., Zhang, Y., Wang, Y.P., Gao, C.X., Establishing a CRISPR-Cas-like immune system conferring DNA virus resistance in plants. Nat. Plants, 1, 2015, 15144.
-
(2015)
Nat. Plants
, vol.1
, pp. 15144
-
-
Ji, X.1
Zhang, H.W.2
Zhang, Y.3
Wang, Y.P.4
Gao, C.X.5
-
38
-
-
84886926151
-
Demonstration of CRISPR/Cas9/sgRNA-mediated targeted gene modification in Arabidopsis, tobacco, sorghum and rice
-
Jiang, W., Zhou, H., Bi, H., Fromm, M., Yang, B., Weeks, D.P., Demonstration of CRISPR/Cas9/sgRNA-mediated targeted gene modification in Arabidopsis, tobacco, sorghum and rice. Nucleic Acids Res., 41, 2013, e188.
-
(2013)
Nucleic Acids Res.
, vol.41
, pp. e188
-
-
Jiang, W.1
Zhou, H.2
Bi, H.3
Fromm, M.4
Yang, B.5
Weeks, D.P.6
-
39
-
-
84903398817
-
Efficient CRISPR/Cas9-mediated gene editing in Arabidopsis thaliana and inheritance of modified genes in the T2 and T3 generations
-
Jiang, W., Yang, B., Weeks, D.P., Efficient CRISPR/Cas9-mediated gene editing in Arabidopsis thaliana and inheritance of modified genes in the T2 and T3 generations. PLoS One, 9, 2014, e99225.
-
(2014)
PLoS One
, vol.9
, pp. e99225
-
-
Jiang, W.1
Yang, B.2
Weeks, D.P.3
-
40
-
-
84933574487
-
STRUCTURAL BIOLOGY. A Cas9-guide RNA complex preorganized for target DNA recognition
-
Jiang, F., Zhou, K., Ma, L., Gressel, S., Doudna, J.A., STRUCTURAL BIOLOGY. A Cas9-guide RNA complex preorganized for target DNA recognition. Science 348 (2015), 1477–1481.
-
(2015)
Science
, vol.348
, pp. 1477-1481
-
-
Jiang, F.1
Zhou, K.2
Ma, L.3
Gressel, S.4
Doudna, J.A.5
-
41
-
-
84865070369
-
A programmable dual-RNA-guided DNA endonuclease in adaptive bacterial immunity
-
Jinek, M., Chylinski, K., Fonfara, I., Hauer, M., Doudna, J.A., Charpentier, E., A programmable dual-RNA-guided DNA endonuclease in adaptive bacterial immunity. Science 337 (2012), 816–821.
-
(2012)
Science
, vol.337
, pp. 816-821
-
-
Jinek, M.1
Chylinski, K.2
Fonfara, I.3
Hauer, M.4
Doudna, J.A.5
Charpentier, E.6
-
42
-
-
84876567971
-
RNA-programmed genome editing in human cells
-
Jinek, M., East, A., Cheng, A., Lin, S., Ma, E., Doudna, J., RNA-programmed genome editing in human cells. Elife, 2, 2013, e00471.
-
(2013)
Elife
, vol.2
, pp. e00471
-
-
Jinek, M.1
East, A.2
Cheng, A.3
Lin, S.4
Ma, E.5
Doudna, J.6
-
43
-
-
84928924333
-
Functional annotation of native enhancers with a Cas9-histone demethylase fusion
-
Kearns, N.A., Pham, H., Tabak, B., Genga, R.M., Silverstein, N.J., Garber, M., Maehr, R., Functional annotation of native enhancers with a Cas9-histone demethylase fusion. Nat. Methods 12 (2015), 401–403.
-
(2015)
Nat. Methods
, vol.12
, pp. 401-403
-
-
Kearns, N.A.1
Pham, H.2
Tabak, B.3
Genga, R.M.4
Silverstein, N.J.5
Garber, M.6
Maehr, R.7
-
44
-
-
84949791988
-
Broadening the targeting range of Staphylococcus aureus CRISPR-Cas9 by modifying PAM recognition
-
Kleinstiver, B.P., Prew, M.S., Tsai, S.Q., Nguyen, N.T., Topkar, V.V., Zheng, Z., Joung, J.K., Broadening the targeting range of Staphylococcus aureus CRISPR-Cas9 by modifying PAM recognition. Nat. Biotechnol. 33 (2015), 1293–1298.
-
(2015)
Nat. Biotechnol.
, vol.33
, pp. 1293-1298
-
-
Kleinstiver, B.P.1
Prew, M.S.2
Tsai, S.Q.3
Nguyen, N.T.4
Topkar, V.V.5
Zheng, Z.6
Joung, J.K.7
-
45
-
-
84937908208
-
Engineered CRISPR-Cas9 nucleases with altered PAM specificities
-
Kleinstiver, B.P., Prew, M.S., Tsai, S.Q., Topkar, V.V., Nguyen, N.T., Zheng, Z., Gonzales, A.P., Li, Z., Peterson, R.T., Yeh, J.R., et al. Engineered CRISPR-Cas9 nucleases with altered PAM specificities. Nature 523 (2015), 481–485.
-
(2015)
Nature
, vol.523
, pp. 481-485
-
-
Kleinstiver, B.P.1
Prew, M.S.2
Tsai, S.Q.3
Topkar, V.V.4
Nguyen, N.T.5
Zheng, Z.6
Gonzales, A.P.7
Li, Z.8
Peterson, R.T.9
Yeh, J.R.10
-
46
-
-
84963941043
-
High-fidelity CRISPR-Cas9 nucleases with no detectable genome-wide off-target effects
-
Kleinstiver, B.P., Pattanayak, V., Prew, M.S., Tsai, S.Q., Nguyen, N.T., Zheng, Z., Joung, J.K., High-fidelity CRISPR-Cas9 nucleases with no detectable genome-wide off-target effects. Nature 529 (2016), 490–495.
-
(2016)
Nature
, vol.529
, pp. 490-495
-
-
Kleinstiver, B.P.1
Pattanayak, V.2
Prew, M.S.3
Tsai, S.Q.4
Nguyen, N.T.5
Zheng, Z.6
Joung, J.K.7
-
47
-
-
84922522034
-
The CRISPR-Cas system for plant genome editing: advances and opportunities
-
Kumar, V., Jain, M., The CRISPR-Cas system for plant genome editing: advances and opportunities. J. Exp. Bot. 66 (2015), 47–57.
-
(2015)
J. Exp. Bot.
, vol.66
, pp. 47-57
-
-
Kumar, V.1
Jain, M.2
-
48
-
-
84929305646
-
A modular gene targeting system for sequential transgene stacking in plants
-
Kumar, S., AlAbed, D., Worden, A., Novak, S., Wu, H., Ausmus, C., Beck, M., Robinson, H., Minicks, T., Hemingway, D., et al. A modular gene targeting system for sequential transgene stacking in plants. J. Biotechnol. 207 (2015), 12–20.
-
(2015)
J. Biotechnol.
, vol.207
, pp. 12-20
-
-
Kumar, S.1
AlAbed, D.2
Worden, A.3
Novak, S.4
Wu, H.5
Ausmus, C.6
Beck, M.7
Robinson, H.8
Minicks, T.9
Hemingway, D.10
-
49
-
-
33746567801
-
A trial of phenome analysis using 4000 Ds-insertional mutants in gene-coding regions of Arabidopsis
-
Kuromori, T., Wada, T., Kamiya, A., Yuguchi, M., Yokouchi, T., Imura, Y., Takabe, H., Sakurai, T., Akiyama, K., Hirayama, T., et al. A trial of phenome analysis using 4000 Ds-insertional mutants in gene-coding regions of Arabidopsis. Plant J. 47 (2006), 640–651.
-
(2006)
Plant J.
, vol.47
, pp. 640-651
-
-
Kuromori, T.1
Wada, T.2
Kamiya, A.3
Yuguchi, M.4
Yokouchi, T.5
Imura, Y.6
Takabe, H.7
Sakurai, T.8
Akiyama, K.9
Hirayama, T.10
-
50
-
-
84948761978
-
Induction of targeted, heritable mutations in barley and Brassica oleracea using RNA-guided Cas9 nuclease
-
Lawrenson, T., Shorinola, O., Stacey, N., Li, C., Ostergaard, L., Patron, N., Uauy, C., Harwood, W., Induction of targeted, heritable mutations in barley and Brassica oleracea using RNA-guided Cas9 nuclease. Genome Biol., 16, 2015, 258.
-
(2015)
Genome Biol.
, vol.16
, pp. 258
-
-
Lawrenson, T.1
Shorinola, O.2
Stacey, N.3
Li, C.4
Ostergaard, L.5
Patron, N.6
Uauy, C.7
Harwood, W.8
-
51
-
-
84922596582
-
CRISPR-P: a web tool for synthetic single-guide RNA design of CRISPR-system in plants
-
Lei, Y., Lu, L., Liu, H.Y., Li, S., Xing, F., Chen, L.L., CRISPR-P: a web tool for synthetic single-guide RNA design of CRISPR-system in plants. Mol. Plant 7 (2014), 1494–1496.
-
(2014)
Mol. Plant
, vol.7
, pp. 1494-1496
-
-
Lei, Y.1
Lu, L.2
Liu, H.Y.3
Li, S.4
Xing, F.5
Chen, L.L.6
-
52
-
-
78651270582
-
TAL nucleases (TALNs): hybrid proteins composed of TAL effectors and FokI DNA-cleavage domain
-
Li, T., Huang, S., Jiang, W.Z., Wright, D., Spalding, M.H., Weeks, D.P., Yang, B., TAL nucleases (TALNs): hybrid proteins composed of TAL effectors and FokI DNA-cleavage domain. Nucleic Acids Res. 39 (2011), 359–372.
-
(2011)
Nucleic Acids Res.
, vol.39
, pp. 359-372
-
-
Li, T.1
Huang, S.2
Jiang, W.Z.3
Wright, D.4
Spalding, M.H.5
Weeks, D.P.6
Yang, B.7
-
53
-
-
84883785822
-
Multiplex and homologous recombination-mediated genome editing in Arabidopsis and Nicotiana benthamiana using guide RNA and Cas9
-
Li, J.F., Norville, J.E., Aach, J., McCormack, M., Zhang, D., Bush, J., Church, G.M., Sheen, J., Multiplex and homologous recombination-mediated genome editing in Arabidopsis and Nicotiana benthamiana using guide RNA and Cas9. Nat. Biotechnol. 31 (2013), 688–691.
-
(2013)
Nat. Biotechnol.
, vol.31
, pp. 688-691
-
-
Li, J.F.1
Norville, J.E.2
Aach, J.3
McCormack, M.4
Zhang, D.5
Bush, J.6
Church, G.M.7
Sheen, J.8
-
54
-
-
84942908491
-
Cas9-Guide RNA directed genome editing in soybean
-
Li, Z., Liu, Z.B., Xing, A., Moon, B.P., Koellhoffer, J.P., Huang, L., Ward, R.T., Clifton, E., Falco, S.C., Cigan, A.M., Cas9-Guide RNA directed genome editing in soybean. Plant Physiol. 169 (2015), 960–970.
-
(2015)
Plant Physiol.
, vol.169
, pp. 960-970
-
-
Li, Z.1
Liu, Z.B.2
Xing, A.3
Moon, B.P.4
Koellhoffer, J.P.5
Huang, L.6
Ward, R.T.7
Clifton, E.8
Falco, S.C.9
Cigan, A.M.10
-
55
-
-
84894321885
-
Targeted mutagenesis in Zea mays using TALENs and the CRISPR/Cas system
-
Liang, Z., Zhang, K., Chen, K., Gao, C., Targeted mutagenesis in Zea mays using TALENs and the CRISPR/Cas system. J. Genet. Genomics 41 (2014), 63–68.
-
(2014)
J. Genet. Genomics
, vol.41
, pp. 63-68
-
-
Liang, Z.1
Zhang, K.2
Chen, K.3
Gao, C.4
-
56
-
-
84863690355
-
The rice ERF transcription factor OsERF922 negatively regulates resistance to Magnaporthe oryzae and salt tolerance
-
Liu, D., Chen, X., Liu, J., Ye, J., Guo, Z., The rice ERF transcription factor OsERF922 negatively regulates resistance to Magnaporthe oryzae and salt tolerance. J. Exp. Bot. 63 (2012), 3899–3911.
-
(2012)
J. Exp. Bot.
, vol.63
, pp. 3899-3911
-
-
Liu, D.1
Chen, X.2
Liu, J.3
Ye, J.4
Guo, Z.5
-
57
-
-
84941188088
-
DSDecode: a web-based tool for decoding of sequencing chromatograms for genotyping of targeted mutations
-
Liu, W., Xie, X., Ma, X., Li, J., Chen, J., Liu, Y.G., DSDecode: a web-based tool for decoding of sequencing chromatograms for genotyping of targeted mutations. Mol. Plant 8 (2015), 1431–1433.
-
(2015)
Mol. Plant
, vol.8
, pp. 1431-1433
-
-
Liu, W.1
Xie, X.2
Ma, X.3
Li, J.4
Chen, J.5
Liu, Y.G.6
-
58
-
-
13844319542
-
Targeted mutagenesis using zinc-finger nucleases in Arabidopsis
-
Lloyd, A., Plaisier, C.L., Carroll, D., Drews, G.N., Targeted mutagenesis using zinc-finger nucleases in Arabidopsis. Proc. Natl. Acad. Sci. USA 102 (2005), 2232–2237.
-
(2005)
Proc. Natl. Acad. Sci. USA
, vol.102
, pp. 2232-2237
-
-
Lloyd, A.1
Plaisier, C.L.2
Carroll, D.3
Drews, G.N.4
-
59
-
-
84942931752
-
A CRISPR/Cas9 toolbox for multiplexed plant genome editing and transcriptional regulation
-
Lowder, L.G., Zhang, D., Baltes, N.J., Paul, J.W., Tang, X., Zheng, X., Voytas, D.F., Hsieh, T.F., Zhang, Y., Qi, Y., A CRISPR/Cas9 toolbox for multiplexed plant genome editing and transcriptional regulation. Plant Physiol. 169 (2015), 971–985.
-
(2015)
Plant Physiol.
, vol.169
, pp. 971-985
-
-
Lowder, L.G.1
Zhang, D.2
Baltes, N.J.3
Paul, J.W.4
Tang, X.5
Zheng, X.6
Voytas, D.F.7
Hsieh, T.F.8
Zhang, Y.9
Qi, Y.10
-
60
-
-
84973410860
-
CRISPR/Cas9-based genome editing systems and analysis of targeted genome mutations in plants
-
Ma, X., Liu, Y.G., CRISPR/Cas9-based genome editing systems and analysis of targeted genome mutations in plants. Hereditas (Beijing) 38 (2016), 118–125.
-
(2016)
Hereditas (Beijing)
, vol.38
, pp. 118-125
-
-
Ma, X.1
Liu, Y.G.2
-
61
-
-
84938739101
-
Rapid decoding of sequence-specific nuclease-induced heterozygous and biallelic mutations by direct sequencing of PCR Products
-
Ma, X., Chen, L., Zhu, Q., Chen, Y., Liu, Y.G., Rapid decoding of sequence-specific nuclease-induced heterozygous and biallelic mutations by direct sequencing of PCR Products. Mol. Plant 8 (2015), 1285–1287.
-
(2015)
Mol. Plant
, vol.8
, pp. 1285-1287
-
-
Ma, X.1
Chen, L.2
Zhu, Q.3
Chen, Y.4
Liu, Y.G.5
-
62
-
-
84938748218
-
A robust CRISPR/Cas9 system for convenient, high-efficiency multiplex genome editing in monocot and dicot plants
-
Ma, X., Zhang, Q., Zhu, Q., Liu, W., Chen, Y., Qiu, R., Wang, B., Yang, Z., Li, H., Lin, Y., et al. A robust CRISPR/Cas9 system for convenient, high-efficiency multiplex genome editing in monocot and dicot plants. Mol. Plant 8 (2015), 1274–1284.
-
(2015)
Mol. Plant
, vol.8
, pp. 1274-1284
-
-
Ma, X.1
Zhang, Q.2
Zhu, Q.3
Liu, W.4
Chen, Y.5
Qiu, R.6
Wang, B.7
Yang, Z.8
Li, H.9
Lin, Y.10
-
63
-
-
84873734105
-
RNA-guided human genome engineering via Cas9
-
Mali, P., Yang, L., Esvelt, K.M., Aach, J., Guell, M., DiCarlo, J.E., Norville, J.E., Church, G.M., RNA-guided human genome engineering via Cas9. Science 339 (2013), 823–826.
-
(2013)
Science
, vol.339
, pp. 823-826
-
-
Mali, P.1
Yang, L.2
Esvelt, K.M.3
Aach, J.4
Guell, M.5
DiCarlo, J.E.6
Norville, J.E.7
Church, G.M.8
-
64
-
-
84891932593
-
Application of the CRISPR-Cas system for efficient genome engineering in plants
-
Mao, Y., Zhang, H., Xu, N., Zhang, B., Gou, F., Zhu, J.K., Application of the CRISPR-Cas system for efficient genome engineering in plants. Mol. Plant 6 (2013), 2008–2011.
-
(2013)
Mol. Plant
, vol.6
, pp. 2008-2011
-
-
Mao, Y.1
Zhang, H.2
Xu, N.3
Zhang, B.4
Gou, F.5
Zhu, J.K.6
-
65
-
-
84941312953
-
Development of germ-line-specific CRISPR-Cas9 systems to improve the production of heritable gene modifications in Arabidopsis
-
Mao, Y., Zhang, Z., Feng, Z., Wei, P., Zhang, H., Botella, J.R., Zhu, J.K., Development of germ-line-specific CRISPR-Cas9 systems to improve the production of heritable gene modifications in Arabidopsis. Plant Biotechnol. J. 14 (2016), 519–532.
-
(2016)
Plant Biotechnol. J.
, vol.14
, pp. 519-532
-
-
Mao, Y.1
Zhang, Z.2
Feng, Z.3
Wei, P.4
Zhang, H.5
Botella, J.R.6
Zhu, J.K.7
-
66
-
-
0034089040
-
Targeted screening for induced mutations
-
McCallum, C.M., Comai, L., Greene, E.A., Henikoff, S., Targeted screening for induced mutations. Nat. Biotechnol. 18 (2000), 455–457.
-
(2000)
Nat. Biotechnol.
, vol.18
, pp. 455-457
-
-
McCallum, C.M.1
Comai, L.2
Greene, E.A.3
Henikoff, S.4
-
67
-
-
84885180177
-
Targeted mutagenesis in rice using CRISPR-Cas system
-
Miao, J., Guo, D., Zhang, J., Huang, Q., Qin, G., Zhang, X., Wan, J., Gu, H., Qu, L.J., Targeted mutagenesis in rice using CRISPR-Cas system. Cell Res. 23 (2013), 1233–1236.
-
(2013)
Cell Res.
, vol.23
, pp. 1233-1236
-
-
Miao, J.1
Guo, D.2
Zhang, J.3
Huang, Q.4
Qin, G.5
Zhang, X.6
Wan, J.7
Gu, H.8
Qu, L.J.9
-
68
-
-
0025331421
-
Regulation of plant gene expression by antisense RNA
-
Mol, J.N., van der Krol, A.R., van Tunen, A.J., van Blokland, R., de Lange, P., Stuitje, A.R., Regulation of plant gene expression by antisense RNA. FEBS Lett. 268 (1990), 427–430.
-
(1990)
FEBS Lett.
, vol.268
, pp. 427-430
-
-
Mol, J.N.1
van der Krol, A.R.2
van Tunen, A.J.3
van Blokland, R.4
de Lange, P.5
Stuitje, A.R.6
-
69
-
-
72149090954
-
A simple cipher governs DNA recognition by TAL effectors
-
Moscou, M.J., Bogdanove, A.J., A simple cipher governs DNA recognition by TAL effectors. Science, 326, 2009, 1501.
-
(2009)
Science
, vol.326
, pp. 1501
-
-
Moscou, M.J.1
Bogdanove, A.J.2
-
70
-
-
84883828590
-
Targeted mutagenesis in the model plant Nicotiana benthamiana using Cas9 RNA-guided endonuclease
-
Nekrasov, V., Staskawicz, B., Weigel, D., Jones, J.D.G., Kamoun, S., Targeted mutagenesis in the model plant Nicotiana benthamiana using Cas9 RNA-guided endonuclease. Nat. Biotechnol. 31 (2013), 691–693.
-
(2013)
Nat. Biotechnol.
, vol.31
, pp. 691-693
-
-
Nekrasov, V.1
Staskawicz, B.2
Weigel, D.3
Jones, J.D.G.4
Kamoun, S.5
-
71
-
-
84896733529
-
Crystal structure of Cas9 in complex with guide RNA and target DNA
-
Nishimasu, H., Ran, F.A., Hsu, P.D., Konermann, S., Shehata, S.I., Dohmae, N., Ishitani, R., Zhang, F., Nureki, O., Crystal structure of Cas9 in complex with guide RNA and target DNA. Cell 156 (2014), 935–949.
-
(2014)
Cell
, vol.156
, pp. 935-949
-
-
Nishimasu, H.1
Ran, F.A.2
Hsu, P.D.3
Konermann, S.4
Shehata, S.I.5
Dohmae, N.6
Ishitani, R.7
Zhang, F.8
Nureki, O.9
-
72
-
-
84956831321
-
A Defect in DNA Ligase4 Enhances the frequency of TALEN-mediated targeted mutagenesis in rice
-
Nishizawa-Yokoi, A., Cermak, T., Hoshino, T., Sugimoto, K., Saika, H., Mori, A., Osakabe, K., Hamada, M., Katayose, Y., Starker, C., et al. A Defect in DNA Ligase4 Enhances the frequency of TALEN-mediated targeted mutagenesis in rice. Plant Physiol. 170 (2016), 653–666.
-
(2016)
Plant Physiol.
, vol.170
, pp. 653-666
-
-
Nishizawa-Yokoi, A.1
Cermak, T.2
Hoshino, T.3
Sugimoto, K.4
Saika, H.5
Mori, A.6
Osakabe, K.7
Hamada, M.8
Katayose, Y.9
Starker, C.10
-
73
-
-
84913568580
-
Programmable RNA recognition and cleavage by CRISPR/Cas9
-
O'Connell, M.R., Oakes, B.L., Sternberg, S.H., East-Seletsky, A., Kaplan, M., Doudna, J.A., Programmable RNA recognition and cleavage by CRISPR/Cas9. Nature 516 (2014), 263–266.
-
(2014)
Nature
, vol.516
, pp. 263-266
-
-
O'Connell, M.R.1
Oakes, B.L.2
Sternberg, S.H.3
East-Seletsky, A.4
Kaplan, M.5
Doudna, J.A.6
-
74
-
-
84938521400
-
Genome editing with engineered nucleases in plants
-
Osakabe, Y., Osakabe, K., Genome editing with engineered nucleases in plants. Plant Cell Physiol. 56 (2015), 389–400.
-
(2015)
Plant Cell Physiol.
, vol.56
, pp. 389-400
-
-
Osakabe, Y.1
Osakabe, K.2
-
75
-
-
84921863093
-
Genome editing in plants via designed zinc finger nucleases
-
Petolino, J.F., Genome editing in plants via designed zinc finger nucleases. In Vitro Cell Dev. Biol. Plant 51 (2015), 1–8.
-
(2015)
In Vitro Cell Dev. Biol. Plant
, vol.51
, pp. 1-8
-
-
Petolino, J.F.1
-
76
-
-
84901386271
-
Synthetic nucleases for genome engineering in plants: prospects for a bright future
-
Puchta, H., Fauser, F., Synthetic nucleases for genome engineering in plants: prospects for a bright future. Plant J. 78 (2014), 727–741.
-
(2014)
Plant J.
, vol.78
, pp. 727-741
-
-
Puchta, H.1
Fauser, F.2
-
77
-
-
42949083192
-
Unexpected failure rates for modular assembly of engineered zinc fingers
-
Ramirez, C.L., Foley, J.E., Wright, D.A., Muller-Lerch, F., Rahman, S.H., Cornu, T.I., Winfrey, R.J., Sander, J.D., Fu, F., Townsend, J.A., et al. Unexpected failure rates for modular assembly of engineered zinc fingers. Nat. Methods 5 (2008), 374–375.
-
(2008)
Nat. Methods
, vol.5
, pp. 374-375
-
-
Ramirez, C.L.1
Foley, J.E.2
Wright, D.A.3
Muller-Lerch, F.4
Rahman, S.H.5
Cornu, T.I.6
Winfrey, R.J.7
Sander, J.D.8
Fu, F.9
Townsend, J.A.10
-
78
-
-
84884288934
-
Double nicking by RNA-guided CRISPR Cas9 for enhanced genome editing specificity
-
Ran, F.A., Hsu, P.D., Lin, C.Y., Gootenberg, J.S., Konermann, S., Trevino, A.E., Scott, D.A., Inoue, A., Matoba, S., Zhang, Y., et al. Double nicking by RNA-guided CRISPR Cas9 for enhanced genome editing specificity. Cell 154 (2013), 1380–1389.
-
(2013)
Cell
, vol.154
, pp. 1380-1389
-
-
Ran, F.A.1
Hsu, P.D.2
Lin, C.Y.3
Gootenberg, J.S.4
Konermann, S.5
Trevino, A.E.6
Scott, D.A.7
Inoue, A.8
Matoba, S.9
Zhang, Y.10
-
79
-
-
84927514894
-
In vivo genome editing using Staphylococcus aureus Cas9
-
Ran, F.A., Cong, L., Yan, W.X., Scott, D.A., Gootenberg, J.S., Kriz, A.J., Zetsche, B., Shalem, O., Wu, X.B., Makarova, K.S., et al. In vivo genome editing using Staphylococcus aureus Cas9. Nature 520 (2015), 186–U198.
-
(2015)
Nature
, vol.520
, pp. 186-U198
-
-
Ran, F.A.1
Cong, L.2
Yan, W.X.3
Scott, D.A.4
Gootenberg, J.S.5
Kriz, A.J.6
Zetsche, B.7
Shalem, O.8
Wu, X.B.9
Makarova, K.S.10
-
80
-
-
84861170955
-
A transcription activator-like effector toolbox for genome engineering
-
Sanjana, N.E., Cong, L., Zhou, Y., Cunniff, M.M., Feng, G., Zhang, F., A transcription activator-like effector toolbox for genome engineering. Nat. Protoc. 7 (2012), 171–192.
-
(2012)
Nat. Protoc.
, vol.7
, pp. 171-192
-
-
Sanjana, N.E.1
Cong, L.2
Zhou, Y.3
Cunniff, M.M.4
Feng, G.5
Zhang, F.6
-
81
-
-
84916624400
-
The CRISPR/Cas system can be used as nuclease for in planta gene targeting and as paired nickases for directed mutagenesis in Arabidopsis resulting in heritable progeny
-
Schiml, S., Fauser, F., Puchta, H., The CRISPR/Cas system can be used as nuclease for in planta gene targeting and as paired nickases for directed mutagenesis in Arabidopsis resulting in heritable progeny. Plant J. 80 (2014), 1139–1150.
-
(2014)
Plant J.
, vol.80
, pp. 1139-1150
-
-
Schiml, S.1
Fauser, F.2
Puchta, H.3
-
82
-
-
84953342539
-
Research progress of genome editing and derivative technologies in plants
-
Shan, Q., Gao, C., Research progress of genome editing and derivative technologies in plants. Hereditas (Beijing) 37 (2015), 953–973.
-
(2015)
Hereditas (Beijing)
, vol.37
, pp. 953-973
-
-
Shan, Q.1
Gao, C.2
-
83
-
-
85042815594
-
Targeted genome modification of crop plants using a CRISPR-Cas system
-
Shan, Q.W., Wang, Y.P., Li, J., Zhang, Y., Chen, K.L., Liang, Z., Zhang, K., Liu, J.X., Xi, J.J., Qiu, J.L., et al. Targeted genome modification of crop plants using a CRISPR-Cas system. Nat. Biotechnol. 31 (2013), 686–688.
-
(2013)
Nat. Biotechnol.
, vol.31
, pp. 686-688
-
-
Shan, Q.W.1
Wang, Y.P.2
Li, J.3
Zhang, Y.4
Chen, K.L.5
Liang, Z.6
Zhang, K.7
Liu, J.X.8
Xi, J.J.9
Qiu, J.L.10
-
84
-
-
0036016441
-
Efficient repair of genomic double-strand breaks by homologous recombination between directly repeated sequences in the plant genome
-
Siebert, R., Puchta, H., Efficient repair of genomic double-strand breaks by homologous recombination between directly repeated sequences in the plant genome. Plant Cell 14 (2002), 1121–1131.
-
(2002)
Plant Cell
, vol.14
, pp. 1121-1131
-
-
Siebert, R.1
Puchta, H.2
-
85
-
-
84952943845
-
Rationally engineered Cas9 nucleases with improved specificity
-
Slaymaker, I.M., Gao, L., Zetsche, B., Scott, D.A., Yan, W.X., Zhang, F., Rationally engineered Cas9 nucleases with improved specificity. Science 351 (2016), 84–88.
-
(2016)
Science
, vol.351
, pp. 84-88
-
-
Slaymaker, I.M.1
Gao, L.2
Zetsche, B.3
Scott, D.A.4
Yan, W.X.5
Zhang, F.6
-
86
-
-
0034283804
-
Requirements for double-strand cleavage by chimeric restriction enzymes with zinc finger DNA-recognition domains
-
Smith, J., Bibikova, M., Whitby, F.G., Reddy, A.R., Chandrasegaran, S., Carroll, D., Requirements for double-strand cleavage by chimeric restriction enzymes with zinc finger DNA-recognition domains. Nucleic Acids Res. 28 (2000), 3361–3369.
-
(2000)
Nucleic Acids Res.
, vol.28
, pp. 3361-3369
-
-
Smith, J.1
Bibikova, M.2
Whitby, F.G.3
Reddy, A.R.4
Chandrasegaran, S.5
Carroll, D.6
-
87
-
-
0034699247
-
Total silencing by intron-spliced hairpin RNAs
-
Smith, N.A., Singh, S.P., Wang, M.B., Stoutjesdijk, P.A., Green, A.G., Waterhouse, P.M., Total silencing by intron-spliced hairpin RNAs. Nature 407 (2000), 319–320.
-
(2000)
Nature
, vol.407
, pp. 319-320
-
-
Smith, N.A.1
Singh, S.P.2
Wang, M.B.3
Stoutjesdijk, P.A.4
Green, A.G.5
Waterhouse, P.M.6
-
88
-
-
84961350912
-
Highly efficient heritable plant genome engineering using Cas9 orthologues from Streptococcus thermophilus and Staphylococcus aureus
-
Steinert, J., Schiml, S., Fauser, F., Puchta, H., Highly efficient heritable plant genome engineering using Cas9 orthologues from Streptococcus thermophilus and Staphylococcus aureus. Plant J. 84 (2015), 1295–1305.
-
(2015)
Plant J.
, vol.84
, pp. 1295-1305
-
-
Steinert, J.1
Schiml, S.2
Fauser, F.3
Puchta, H.4
-
89
-
-
84895871173
-
DNA interrogation by the CRISPR RNA-guided endonuclease Cas9
-
Sternberg, S.H., Redding, S., Jinek, M., Greene, E.C., Doudna, J.A., DNA interrogation by the CRISPR RNA-guided endonuclease Cas9. Nature 507 (2014), 62–67.
-
(2014)
Nature
, vol.507
, pp. 62-67
-
-
Sternberg, S.H.1
Redding, S.2
Jinek, M.3
Greene, E.C.4
Doudna, J.A.5
-
90
-
-
84962407106
-
Engineering herbicide-resistant rice plants through CRISPR/Cas9-mediated homologous recombination of acetolactate synthase
-
Sun, Y., Zhang, X., Wu, C., He, Y., Ma, Y., Hou, H., Guo, X., Du, W., Zhao, Y., Xia, L., Engineering herbicide-resistant rice plants through CRISPR/Cas9-mediated homologous recombination of acetolactate synthase. Mol. Plant 9 (2016), 628–631.
-
(2016)
Mol. Plant
, vol.9
, pp. 628-631
-
-
Sun, Y.1
Zhang, X.2
Wu, C.3
He, Y.4
Ma, Y.5
Hou, H.6
Guo, X.7
Du, W.8
Zhao, Y.9
Xia, L.10
-
91
-
-
84942901283
-
Targeted mutagenesis, precise gene editing, and site-specific gene insertion in maize using Cas9 and guide RNA
-
Svitashev, S., Young, J.K., Schwartz, C., Gao, H.R., Falco, S.C., Cigan, A.M., Targeted mutagenesis, precise gene editing, and site-specific gene insertion in maize using Cas9 and guide RNA. Plant Physiol. 169 (2015), 931–945.
-
(2015)
Plant Physiol.
, vol.169
, pp. 931-945
-
-
Svitashev, S.1
Young, J.K.2
Schwartz, C.3
Gao, H.R.4
Falco, S.C.5
Cigan, A.M.6
-
92
-
-
80755187806
-
Double-strand break end resection and repair pathway choice
-
Symington, L.S., Gautier, J., Double-strand break end resection and repair pathway choice. Annu. Rev. Genet. 45 (2011), 247–271.
-
(2011)
Annu. Rev. Genet.
, vol.45
, pp. 247-271
-
-
Symington, L.S.1
Gautier, J.2
-
93
-
-
85015865463
-
CRISPRing into the woods
-
Tsai, C.J., Xue, L.J., CRISPRing into the woods. GM Crops Food 6 (2015), 206–215.
-
(2015)
GM Crops Food
, vol.6
, pp. 206-215
-
-
Tsai, C.J.1
Xue, L.J.2
-
94
-
-
84874627868
-
Plant genome engineering with sequence-specific nucleases
-
Voytas, D.F., Plant genome engineering with sequence-specific nucleases. Annu. Rev. Plant Biol. 64 (2013), 327–350.
-
(2013)
Annu. Rev. Plant Biol.
, vol.64
, pp. 327-350
-
-
Voytas, D.F.1
-
95
-
-
84921934205
-
Simultaneous editing of three homoeoalleles in hexaploid bread wheat confers heritable resistance to powdery mildew
-
Wang, Y., Cheng, X., Shan, Q., Zhang, Y., Liu, J., Gao, C., Qiu, J.L., Simultaneous editing of three homoeoalleles in hexaploid bread wheat confers heritable resistance to powdery mildew. Nat. Biotechnol. 32 (2014), 947–951.
-
(2014)
Nat. Biotechnol.
, vol.32
, pp. 947-951
-
-
Wang, Y.1
Cheng, X.2
Shan, Q.3
Zhang, Y.4
Liu, J.5
Gao, C.6
Qiu, J.L.7
-
96
-
-
84938988571
-
Efficient targeted mutagenesis in potato by the CRISPR/Cas9 system
-
Wang, S., Zhang, S., Wang, W., Xiong, X., Meng, F., Cui, X., Efficient targeted mutagenesis in potato by the CRISPR/Cas9 system. Plant Cell Rep. 34 (2015), 1473–1476.
-
(2015)
Plant Cell Rep.
, vol.34
, pp. 1473-1476
-
-
Wang, S.1
Zhang, S.2
Wang, W.3
Xiong, X.4
Meng, F.5
Cui, X.6
-
97
-
-
84937568562
-
Egg cell-specific promoter-controlled CRISPR/Cas9 efficiently generates homozygous mutants for multiple target genes in Arabidopsis in a single generation
-
Wang, Z.P., Xing, H.L., Dong, L., Zhang, H.Y., Han, C.Y., Wang, X.C., Chen, Q.J., Egg cell-specific promoter-controlled CRISPR/Cas9 efficiently generates homozygous mutants for multiple target genes in Arabidopsis in a single generation. Genome Biol., 16, 2015, 144.
-
(2015)
Genome Biol.
, vol.16
, pp. 144
-
-
Wang, Z.P.1
Xing, H.L.2
Dong, L.3
Zhang, H.Y.4
Han, C.Y.5
Wang, X.C.6
Chen, Q.J.7
-
98
-
-
84977500985
-
Enhanced rice blast resistance by CRISPR/Cas9-targeted mutagenesis of the ERF transcription factor gene OsERF922
-
Wang, F., Wang, C., Liu, P., Lei, C., Hao, W., Gao, Y., Liu, Y.-G., Zhao, K., Enhanced rice blast resistance by CRISPR/Cas9-targeted mutagenesis of the ERF transcription factor gene OsERF922. PLoS One, 11, 2016, e0154027.
-
(2016)
PLoS One
, vol.11
, pp. e0154027
-
-
Wang, F.1
Wang, C.2
Liu, P.3
Lei, C.4
Hao, W.5
Gao, Y.6
Liu, Y.-G.7
Zhao, K.8
-
99
-
-
0037227689
-
Exploring plant genomes by RNA-induced gene silencing
-
Waterhouse, P.M., Helliwell, C.A., Exploring plant genomes by RNA-induced gene silencing. Nat. Rev. Genet. 4 (2003), 29–38.
-
(2003)
Nat. Rev. Genet.
, vol.4
, pp. 29-38
-
-
Waterhouse, P.M.1
Helliwell, C.A.2
-
100
-
-
84939191325
-
Use of designer nucleases for targeted gene and genome editing in plants
-
Weeks, D.P., Spalding, M.H., Yang, B., Use of designer nucleases for targeted gene and genome editing in plants. Plant Biotechnol. J. 14 (2015), 483–495.
-
(2015)
Plant Biotechnol. J.
, vol.14
, pp. 483-495
-
-
Weeks, D.P.1
Spalding, M.H.2
Yang, B.3
-
101
-
-
0036078076
-
Compositional gradients in Gramineae genes
-
Wong, G.K., Wang, J., Tao, L., Tan, J., Zhang, J., Passey, D.A., Yu, J., Compositional gradients in Gramineae genes. Genome Res. 12 (2002), 851–856.
-
(2002)
Genome Res.
, vol.12
, pp. 851-856
-
-
Wong, G.K.1
Wang, J.2
Tao, L.3
Tan, J.4
Zhang, J.5
Passey, D.A.6
Yu, J.7
-
102
-
-
84947255513
-
DNA-free genome editing in plants with preassembled CRISPR-Cas9 ribonucleoproteins
-
Woo, J.W., Kim, J., Kwon, S.I., Corvalan, C., Cho, S.W., Kim, H., Kim, S.G., Kim, S.T., Choe, S., Kim, J.S., DNA-free genome editing in plants with preassembled CRISPR-Cas9 ribonucleoproteins. Nat. Biotechnol. 33 (2015), 1162–1164.
-
(2015)
Nat. Biotechnol.
, vol.33
, pp. 1162-1164
-
-
Woo, J.W.1
Kim, J.2
Kwon, S.I.3
Corvalan, C.4
Cho, S.W.5
Kim, H.6
Kim, S.G.7
Kim, S.T.8
Choe, S.9
Kim, J.S.10
-
103
-
-
12444307483
-
Development of enhancer trap lines for functional analysis of the rice genome
-
Wu, C., Li, X., Yuan, W., Chen, G., Kilian, A., Li, J., Xu, C., Li, X., Zhou, D.X., Wang, S., et al. Development of enhancer trap lines for functional analysis of the rice genome. Plant J. 35 (2003), 418–427.
-
(2003)
Plant J.
, vol.35
, pp. 418-427
-
-
Wu, C.1
Li, X.2
Yuan, W.3
Chen, G.4
Kilian, A.5
Li, J.6
Xu, C.7
Li, X.8
Zhou, D.X.9
Wang, S.10
-
104
-
-
84884962826
-
RNA-guided genome editing in plants using a CRISPR-Cas system
-
Xie, K., Yang, Y., RNA-guided genome editing in plants using a CRISPR-Cas system. Mol. Plant 6 (2013), 1975–1983.
-
(2013)
Mol. Plant
, vol.6
, pp. 1975-1983
-
-
Xie, K.1
Yang, Y.2
-
105
-
-
84899895901
-
Genome-wide prediction of highly specific guide RNA spacers for CRISPR-Cas9-mediated genome editing in model plants and major crops
-
Xie, K., Zhang, J., Yang, Y., Genome-wide prediction of highly specific guide RNA spacers for CRISPR-Cas9-mediated genome editing in model plants and major crops. Mol. Plant 7 (2014), 923–926.
-
(2014)
Mol. Plant
, vol.7
, pp. 923-926
-
-
Xie, K.1
Zhang, J.2
Yang, Y.3
-
106
-
-
84925262435
-
Boosting CRISPR/Cas9 multiplex editing capability with the endogenous tRNA-processing system
-
Xie, K., Minkenberg, B., Yang, Y., Boosting CRISPR/Cas9 multiplex editing capability with the endogenous tRNA-processing system. Proc. Natl. Acad. Sci. USA 112 (2015), 3570–3575.
-
(2015)
Proc. Natl. Acad. Sci. USA
, vol.112
, pp. 3570-3575
-
-
Xie, K.1
Minkenberg, B.2
Yang, Y.3
-
107
-
-
84964313841
-
A CRISPR/Cas9 toolkit for multiplex genome editing in plants
-
Xing, H.L., Dong, L., Wang, Z.P., Zhang, H.Y., Han, C.Y., Liu, B., Wang, X.C., Chen, Q.J., A CRISPR/Cas9 toolkit for multiplex genome editing in plants. BMC Plant Biol., 14, 2014, 327.
-
(2014)
BMC Plant Biol.
, vol.14
, pp. 327
-
-
Xing, H.L.1
Dong, L.2
Wang, Z.P.3
Zhang, H.Y.4
Han, C.Y.5
Liu, B.6
Wang, X.C.7
Chen, Q.J.8
-
108
-
-
84938551842
-
Gene targeting using the Agrobacterium tumefaciens-mediated CRISPR-Cas system in rice
-
Xu, R., Li, H., Qin, R., Wang, L., Li, L., Wei, P., Yang, J., Gene targeting using the Agrobacterium tumefaciens-mediated CRISPR-Cas system in rice. Rice (N Y), 7, 2014, 5.
-
(2014)
Rice (N Y)
, vol.7
, pp. 5
-
-
Xu, R.1
Li, H.2
Qin, R.3
Wang, L.4
Li, L.5
Wei, P.6
Yang, J.7
-
109
-
-
84947723842
-
High efficiency genome editing in Arabidopsis using Yao promoter-driven CRISPR/Cas9 system
-
Yan, L., Wei, S., Wu, Y., Hu, R., Li, H., Yang, W., Xie, Q., High efficiency genome editing in Arabidopsis using Yao promoter-driven CRISPR/Cas9 system. Mol. Plant 8 (2015), 1820–1823.
-
(2015)
Mol. Plant
, vol.8
, pp. 1820-1823
-
-
Yan, L.1
Wei, S.2
Wu, Y.3
Hu, R.4
Li, H.5
Yang, W.6
Xie, Q.7
-
110
-
-
84878533787
-
Genomic resources for functional analyses of the rice genome
-
Yang, Y., Li, Y., Wu, C., Genomic resources for functional analyses of the rice genome. Curr. Opin. Plant Biol. 16 (2013), 157–163.
-
(2013)
Curr. Opin. Plant Biol.
, vol.16
, pp. 157-163
-
-
Yang, Y.1
Li, Y.2
Wu, C.3
-
111
-
-
84943602335
-
A geminivirus-based guide RNA delivery system for CRISPR/Cas9 mediated plant genome editing
-
Yin, K., Han, T., Liu, G., Chen, T., Wang, Y., Yu, A.Y., Liu, Y., A geminivirus-based guide RNA delivery system for CRISPR/Cas9 mediated plant genome editing. Sci. Rep., 5, 2015, 14926.
-
(2015)
Sci. Rep.
, vol.5
, pp. 14926
-
-
Yin, K.1
Han, T.2
Liu, G.3
Chen, T.4
Wang, Y.5
Yu, A.Y.6
Liu, Y.7
-
112
-
-
84975678715
-
Cpf1 is a single RNA-guided endonuclease of a Class 2 CRISPR-Cas system
-
Zetsche, B., Gootenberg, J.S., Abudayyeh, O.O., Slaymaker, I.M., Makarova, K.S., Essletzbichler, P., Volz, S.E., Joung, J., Oost, J.V.D., Regev, A., Cpf1 is a single RNA-guided endonuclease of a Class 2 CRISPR-Cas system. Cell 163 (2015), 759–771.
-
(2015)
Cell
, vol.163
, pp. 759-771
-
-
Zetsche, B.1
Gootenberg, J.S.2
Abudayyeh, O.O.3
Slaymaker, I.M.4
Makarova, K.S.5
Essletzbichler, P.6
Volz, S.E.7
Joung, J.8
Oost, J.V.D.9
Regev, A.10
-
113
-
-
79953783824
-
Targeted mutagenesis in Arabidopsis using zinc-finger nucleases
-
Zhang, F., Voytas, D.F., Targeted mutagenesis in Arabidopsis using zinc-finger nucleases. Methods Mol. Biol. 701 (2011), 167–177.
-
(2011)
Methods Mol. Biol.
, vol.701
, pp. 167-177
-
-
Zhang, F.1
Voytas, D.F.2
-
114
-
-
77955395799
-
High frequency targeted mutagenesis in Arabidopsis thaliana using zinc finger nucleases
-
Zhang, F., Maeder, M.L., Unger-Wallace, E., Hoshaw, J.P., Reyon, D., Christian, M., Li, X.H., Pierick, C.J., Dobbs, D., Peterson, T., et al. High frequency targeted mutagenesis in Arabidopsis thaliana using zinc finger nucleases. Proc. Natl. Acad. Sci. USA 107 (2010), 12028–12033.
-
(2010)
Proc. Natl. Acad. Sci. USA
, vol.107
, pp. 12028-12033
-
-
Zhang, F.1
Maeder, M.L.2
Unger-Wallace, E.3
Hoshaw, J.P.4
Reyon, D.5
Christian, M.6
Li, X.H.7
Pierick, C.J.8
Dobbs, D.9
Peterson, T.10
-
115
-
-
84904639258
-
The CRISPR/Cas9 system produces specific and homozygous targeted gene editing in rice in one generation
-
Zhang, H., Zhang, J., Wei, P., Zhang, B., Gou, F., Feng, Z., Mao, Y., Yang, L., Zhang, H., Xu, N., et al. The CRISPR/Cas9 system produces specific and homozygous targeted gene editing in rice in one generation. Plant Biotechnol. J. 12 (2014), 797–807.
-
(2014)
Plant Biotechnol. J.
, vol.12
, pp. 797-807
-
-
Zhang, H.1
Zhang, J.2
Wei, P.3
Zhang, B.4
Gou, F.5
Feng, Z.6
Mao, Y.7
Yang, L.8
Zhang, H.9
Xu, N.10
-
116
-
-
84949557262
-
A multiplex CRISPR/Cas9 platform for fast and efficient editing of multiple genes in Arabidopsis
-
Zhang, Z., Mao, Y., Ha, S., Liu, W., Botella, J.R., Zhu, J.K., A multiplex CRISPR/Cas9 platform for fast and efficient editing of multiple genes in Arabidopsis. Plant Cell Rep., 2015, 10.1007/s00299-015-1900-z.
-
(2015)
Plant Cell Rep.
-
-
Zhang, Z.1
Mao, Y.2
Ha, S.3
Liu, W.4
Botella, J.R.5
Zhu, J.K.6
-
117
-
-
84962909415
-
An alternative strategy for targeted gene replacement in plants using a dual-sgRNA/Cas9 design
-
Zhao, Y., Zhang, C., Liu, W., Gao, W., Liu, C., Song, G., Li, W.X., Mao, L., Chen, B., Xu, Y., et al. An alternative strategy for targeted gene replacement in plants using a dual-sgRNA/Cas9 design. Sci. Rep., 6, 2016, 23890.
-
(2016)
Sci. Rep.
, vol.6
, pp. 23890
-
-
Zhao, Y.1
Zhang, C.2
Liu, W.3
Gao, W.4
Liu, C.5
Song, G.6
Li, W.X.7
Mao, L.8
Chen, B.9
Xu, Y.10
-
118
-
-
84961774687
-
Effective screen of CRISPR/Cas9-induced mutants in rice by single-strand conformation polymorphism
-
Zheng, X., Yang, S., Zhang, D., Zhong, Z., Tang, X., Deng, K., Zhou, J., Qi, Y., Zhang, Y., Effective screen of CRISPR/Cas9-induced mutants in rice by single-strand conformation polymorphism. Plant Cell Rep., 2016, 10.1007/s00299-016-1967-1.
-
(2016)
Plant Cell Rep.
-
-
Zheng, X.1
Yang, S.2
Zhang, D.3
Zhong, Z.4
Tang, X.5
Deng, K.6
Zhou, J.7
Qi, Y.8
Zhang, Y.9
-
119
-
-
84921549293
-
Large chromosomal deletions and heritable small genetic changes induced by CRISPR/Cas9 in rice
-
Zhou, H., Liu, B., Weeks, D.P., Spalding, M.H., Yang, B., Large chromosomal deletions and heritable small genetic changes induced by CRISPR/Cas9 in rice. Nucleic Acids Res. 42 (2014), 10903–10914.
-
(2014)
Nucleic Acids Res.
, vol.42
, pp. 10903-10914
-
-
Zhou, H.1
Liu, B.2
Weeks, D.P.3
Spalding, M.H.4
Yang, B.5
-
120
-
-
84919347989
-
RNase Z(S1) processes UbL40 mRNAs and controls thermosensitive genic male sterility in rice
-
Zhou, H., Zhou, M., Yang, Y., Li, J., Zhu, L., Jiang, D., Dong, J., Liu, Q., Gu, L., Zhou, L., et al. RNase Z(S1) processes UbL40 mRNAs and controls thermosensitive genic male sterility in rice. Nat. Commun., 5, 2014, 4884.
-
(2014)
Nat. Commun.
, vol.5
, pp. 4884
-
-
Zhou, H.1
Zhou, M.2
Yang, Y.3
Li, J.4
Zhu, L.5
Jiang, D.6
Dong, J.7
Liu, Q.8
Gu, L.9
Zhou, L.10
-
121
-
-
84942827085
-
Exploiting SNPs for biallelic CRISPR mutations in the outcrossing woody perennial Populus reveals 4-coumarate:CoA ligase specificity and redundancy
-
Zhou, X., Jacobs, T.B., Xue, L.J., Harding, S.A., Tsai, C.J., Exploiting SNPs for biallelic CRISPR mutations in the outcrossing woody perennial Populus reveals 4-coumarate:CoA ligase specificity and redundancy. New Phytol. 208 (2015), 298–301.
-
(2015)
New Phytol.
, vol.208
, pp. 298-301
-
-
Zhou, X.1
Jacobs, T.B.2
Xue, L.J.3
Harding, S.A.4
Tsai, C.J.5
-
122
-
-
84923229919
-
An efficient genotyping method for genome-modified animals and human cells generated with CRISPR/Cas9 system
-
Zhu, X., Xu, Y., Yu, S., Lu, L., Ding, M., Cheng, J., Song, G., Gao, X., Yao, L., Fan, D., et al. An efficient genotyping method for genome-modified animals and human cells generated with CRISPR/Cas9 system. Sci. Rep., 4, 2014, 6420.
-
(2014)
Sci. Rep.
, vol.4
, pp. 6420
-
-
Zhu, X.1
Xu, Y.2
Yu, S.3
Lu, L.4
Ding, M.5
Cheng, J.6
Song, G.7
Gao, X.8
Yao, L.9
Fan, D.10
|