메뉴 건너뛰기




Volumn 1, Issue 2, 2014, Pages 190-204

Non-coding RNA: A new frontier in regulatory biology

Author keywords

Biological functions; Experimental approaches; Functional genomics; Non coding RNA; Regulatory mechanisms; The RNA world

Indexed keywords


EID: 84924233980     PISSN: 20955138     EISSN: 2053714X     Source Type: Journal    
DOI: 10.1093/nsr/nwu008     Document Type: Review
Times cited : (183)

References (173)
  • 1
    • 2042437650 scopus 로고    scopus 로고
    • Initial sequencing and analysis of the human genome
    • Lander, ES, Linton, LM and Birren, B et al. Initial sequencing and analysis of the human genome. Nature 2001; 409: 860-921.
    • (2001) Nature , vol.409 , pp. 860-921
    • Lander, E.S.1    Linton, L.M.2    Birren, B.3
  • 2
    • 84865790047 scopus 로고    scopus 로고
    • An integrated encyclopedia of DNA elements in the human genome
    • Bernstein, BE, Birney, E and Dunham, I et al. An integrated encyclopedia of DNA elements in the human genome. Nature 2012; 489: 57-74.
    • (2012) Nature , vol.489 , pp. 57-74
    • Bernstein, B.E.1    Birney, E.2    Dunham, I.3
  • 3
    • 0035656688 scopus 로고    scopus 로고
    • Non-coding RNA genes and the modern RNA world
    • Eddy, SR. Non-coding RNA genes and the modern RNA world. Nat Rev Genet 2001; 2: 919-29.
    • (2001) Nat Rev Genet , vol.2 , pp. 919-929
    • Eddy, S.R.1
  • 4
    • 84879969127 scopus 로고    scopus 로고
    • Ribosome profiling provides evidence that large noncoding RNAs do not encode proteins
    • Guttman, M, Russell, P and Ingolia, NT et al., Ribosome profiling provides evidence that large noncoding RNAs do not encode proteins. Cell 2013; 154: 240-51.
    • (2013) Cell , vol.154 , pp. 240-251
    • Guttman, M.1    Russell, P.2    Ingolia, N.T.3
  • 5
    • 84865839598 scopus 로고    scopus 로고
    • Long noncoding RNAs are rarely translated in two human cell lines
    • Bánfai, B, Jia, H and Khatun, J et al. Long noncoding RNAs are rarely translated in two human cell lines. Genome Res 2012; 22: 1646-57.
    • (2012) Genome Res , vol.22 , pp. 1646-1657
    • Bánfai, B.1    Jia, H.2    Khatun, J.3
  • 6
    • 84856998951 scopus 로고    scopus 로고
    • The long arm of long noncoding RNAs: roles as sensors regulating gene transcriptional programs
    • Wang, X, Song, X and Glass, CK et al. The long arm of long noncoding RNAs: roles as sensors regulating gene transcriptional programs. Cold Spring Harb Perspect Biol 2011; 3: a003756.
    • (2011) Cold Spring Harb Perspect Biol , vol.3
    • Wang, X.1    Song, X.2    Glass, C.K.3
  • 7
    • 84861904178 scopus 로고    scopus 로고
    • Genome regulation by long noncoding RNAs
    • Rinn, JL and Chang, HY. Genome regulation by long noncoding RNAs. Annu Rev Biochem 2012; 81: 145-66.
    • (2012) Annu Rev Biochem , vol.81 , pp. 145-166
    • Rinn, J.L.1    Chang, H.Y.2
  • 8
    • 84890860436 scopus 로고    scopus 로고
    • Long noncoding RNAs: fresh perspectives into the RNA world
    • Yang, L, Froberg, JE and Lee, JT. Long noncoding RNAs: fresh perspectives into the RNA world. Trends Biochem Sci 2014; 39: 35-43.
    • (2014) Trends Biochem Sci , vol.39 , pp. 35-43
    • Yang, L.1    Froberg, J.E.2    Lee, J.T.3
  • 9
    • 81355142141 scopus 로고    scopus 로고
    • Non-coding RNAs in human disease
    • Esteller, M. Non-coding RNAs in human disease. Nat Rev Genet 2011; 12: 861-74.
    • (2011) Nat Rev Genet , vol.12 , pp. 861-874
    • Esteller, M.1
  • 10
    • 84875200257 scopus 로고    scopus 로고
    • Long noncoding RNAs: cellular address codes in development and disease
    • Batista, PJ and Chang, HY. Long noncoding RNAs: cellular address codes in development and disease. Cell 2013; 152: 1298-307.
    • (2013) Cell , vol.152 , pp. 1298-1307
    • Batista, P.J.1    Chang, H.Y.2
  • 11
    • 84890559595 scopus 로고    scopus 로고
    • Long non-coding RNAs: new players in cell differentiation and development
    • Fatica, A and Bozzoni, I. Long non-coding RNAs: new players in cell differentiation and development. Nat Rev Genet 2014; 15: 7-21.
    • (2014) Nat Rev Genet , vol.15 , pp. 7-21
    • Fatica, A.1    Bozzoni, I.2
  • 12
    • 84872912456 scopus 로고    scopus 로고
    • Finding the end: recruitment of telomerase to telomeres
    • Nandakumar, J and Cech, TR. Finding the end: recruitment of telomerase to telomeres. Nat Rev Mol Cell Biol 2013; 14: 69-82.
    • (2013) Nat Rev Mol Cell Biol , vol.14 , pp. 69-82
    • Nandakumar, J.1    Cech, T.R.2
  • 13
    • 60149098474 scopus 로고    scopus 로고
    • Small RNAs as guardians of the genome
    • Malone, CD and Hannon, GJ. Small RNAs as guardians of the genome. Cell 2009; 136: 656-68.
    • (2009) Cell , vol.136 , pp. 656-668
    • Malone, C.D.1    Hannon, G.J.2
  • 14
    • 77953629046 scopus 로고    scopus 로고
    • Regulation of mRNA translation and stability by microRNAs
    • Fabian, MR, Sonenberg, N and Filipowicz, W. Regulation of mRNA translation and stability by microRNAs. Annu Rev Biochem 2010; 79: 351-79.
    • (2010) Annu Rev Biochem , vol.79 , pp. 351-379
    • Fabian, M.R.1    Sonenberg, N.2    Filipowicz, W.3
  • 15
    • 70350238350 scopus 로고    scopus 로고
    • The biogenesis and function of PIWI proteins and piRNAs: progress and prospect
    • Thomson, T and Lin, H. The biogenesis and function of PIWI proteins and piRNAs: progress and prospect. Annu Rev Cell Dev Biol 2009; 25: 355-76.
    • (2009) Annu Rev Cell Dev Biol , vol.25 , pp. 355-376
    • Thomson, T.1    Lin, H.2
  • 16
    • 84877929407 scopus 로고    scopus 로고
    • Beyond transposons: the epigenetic and somatic functions of the Piwi-piRNA mechanism
    • Peng, JC and Lin, H. Beyond transposons: the epigenetic and somatic functions of the Piwi-piRNA mechanism. Curr Opin Cell Biol 2013; 25: 190-4.
    • (2013) Curr Opin Cell Biol , vol.25 , pp. 190-194
    • Peng, J.C.1    Lin, H.2
  • 17
    • 84858446579 scopus 로고    scopus 로고
    • MicroRNAs and their targets: recognition, regulation and an emerging reciprocal relationship
    • Pasquinelli, AE. MicroRNAs and their targets: recognition, regulation and an emerging reciprocal relationship. Nat Rev Genet 2012; 13: 271-82.
    • (2012) Nat Rev Genet , vol.13 , pp. 271-282
    • Pasquinelli, A.E.1
  • 18
    • 84865727393 scopus 로고    scopus 로고
    • The GENCODE v7 catalog of human long noncoding RNAs: analysis of their gene structure, evolution, and expression
    • Derrien, T, Johnson, R and Bussotti, G et al. The GENCODE v7 catalog of human long noncoding RNAs: analysis of their gene structure, evolution, and expression. Genome Res 2012; 22: 1775-89.
    • (2012) Genome Res , vol.22 , pp. 1775-1789
    • Derrien, T.1    Johnson, R.2    Bussotti, G.3
  • 19
    • 84874266637 scopus 로고    scopus 로고
    • Rfam 11.0: 10 years of RNA families
    • Burge, SW, Daub, J and Eberhardt, R et al. Rfam 11.0: 10 years of RNA families. Nucleic Acids Res 2013; 41: D226-32.
    • (2013) Nucleic Acids Res , vol.41 , pp. D226-D232
    • Burge, S.W.1    Daub, J.2    Eberhardt, R.3
  • 20
    • 84879694221 scopus 로고    scopus 로고
    • Rev-Erbs repress macrophage gene expression by inhibiting enhancer-directed transcription
    • Lam, MT, Cho, H and Lesch, HP et al. Rev-Erbs repress macrophage gene expression by inhibiting enhancer-directed transcription. Nature 2013; 498: 511-5.
    • (2013) Nature , vol.498 , pp. 511-515
    • Lam, M.T.1    Cho, H.2    Lesch, H.P.3
  • 21
    • 62249133709 scopus 로고    scopus 로고
    • Chromatin signature reveals over a thousand highly conserved large non-coding RNAs in mammals
    • Guttman, M, Amit, I and Garber, M et al. Chromatin signature reveals over a thousand highly conserved large non-coding RNAs in mammals. Nature 2009; 458: 223-7.
    • (2009) Nature , vol.458 , pp. 223-227
    • Guttman, M.1    Amit, I.2    Garber, M.3
  • 22
    • 33846984935 scopus 로고    scopus 로고
    • Transcriptional noise and the fidelity of initiation by RNA polymerase II
    • Struhl, K. Transcriptional noise and the fidelity of initiation by RNA polymerase II. Nat Struct Mol Biol 2007; 14: 103-5.
    • (2007) Nat Struct Mol Biol , vol.14 , pp. 103-105
    • Struhl, K.1
  • 23
    • 0024476917 scopus 로고
    • RNA evolution and the origins of life
    • Joyce, GF. RNA evolution and the origins of life. Nature 1989; 338: 217-24.
    • (1989) Nature , vol.338 , pp. 217-224
    • Joyce, G.F.1
  • 24
    • 84901848680 scopus 로고
    • The RNA world
    • Gibert, W. The RNA world. Nature 1986; 319: 618.
    • (1986) Nature , vol.319 , pp. 618
    • Gibert, W.1
  • 25
    • 33745166320 scopus 로고    scopus 로고
    • RNase P: interface of the RNA and protein worlds
    • Evans, D, Marquez, SM and Pace, NR. RNase P: interface of the RNA and protein worlds. Trends Biochem Sci 2006; 31: 333-41.
    • (2006) Trends Biochem Sci , vol.31 , pp. 333-341
    • Evans, D.1    Marquez, S.M.2    Pace, N.R.3
  • 26
    • 0037062949 scopus 로고    scopus 로고
    • The chemical repertoire of natural ribozymes
    • Doudna, JA and Cech, TR. The chemical repertoire of natural ribozymes. Nature 2002; 418: 222-8.
    • (2002) Nature , vol.418 , pp. 222-228
    • Doudna, J.A.1    Cech, T.R.2
  • 27
    • 0030901131 scopus 로고    scopus 로고
    • Continuous in vitro evolution of catalytic function
    • Wright, MC and Joyce, GF. Continuous in vitro evolution of catalytic function. Science 1997; 276: 614-7.
    • (1997) Science , vol.276 , pp. 614-617
    • Wright, M.C.1    Joyce, G.F.2
  • 28
    • 0035906978 scopus 로고    scopus 로고
    • RNA-catalyzed RNA polymerization: accurate and general RNA-templated primer extension
    • Johnston, WK, Unrau, PJ and Lawrence, MS et al. RNA-catalyzed RNA polymerization: accurate and general RNA-templated primer extension. Science 2001; 292: 1319-25.
    • (2001) Science , vol.292 , pp. 1319-1325
    • Johnston, W.K.1    Unrau, P.J.2    Lawrence, M.S.3
  • 29
    • 0037062958 scopus 로고    scopus 로고
    • The involvement of RNA in ribosome function
    • Moore, PB and Steitz, TA. The involvement of RNA in ribosome function. Nature 2002; 418: 229-35.
    • (2002) Nature , vol.418 , pp. 229-235
    • Moore, P.B.1    Steitz, T.A.2
  • 30
    • 84873629024 scopus 로고    scopus 로고
    • Crystal structure of Prp8 reveals active site cavity of the spliceosome
    • Galej, WP, Oubridge, C and Newman, AJ et al. Crystal structure of Prp8 reveals active site cavity of the spliceosome. Nature 2013; 493: 638-43.
    • (2013) Nature , vol.493 , pp. 638-643
    • Galej, W.P.1    Oubridge, C.2    Newman, A.J.3
  • 31
    • 78650306521 scopus 로고    scopus 로고
    • Small RNA sorting: matchmaking for Argonautes
    • Czech, B and Hannon, GJ. Small RNA sorting: matchmaking for Argonautes. Nat Rev Genet 2011; 12: 19-31.
    • (2011) Nat Rev Genet , vol.12 , pp. 19-31
    • Czech, B.1    Hannon, G.J.2
  • 32
    • 84876935138 scopus 로고    scopus 로고
    • Mapping the human miRNA interactome by CLASH reveals frequent noncanonical binding
    • Helwak, A, Kudla, G and Dudnakova, T et al. Mapping the human miRNA interactome by CLASH reveals frequent noncanonical binding. Cell 2013; 153: 654-65.
    • (2013) Cell , vol.153 , pp. 654-665
    • Helwak, A.1    Kudla, G.2    Dudnakova, T.3
  • 33
    • 84875445608 scopus 로고    scopus 로고
    • CDD: conserved domains and protein three-dimensional structure
    • Marchler-Bauer, A, Zheng, C and Chitsaz, F et al. CDD: conserved domains and protein three-dimensional structure. Nucleic Acids Res 2013; 41: D348-52.
    • (2013) Nucleic Acids Res , vol.41 , pp. D348-D352
    • Marchler-Bauer, A.1    Zheng, C.2    Chitsaz, F.3
  • 34
    • 84858077472 scopus 로고    scopus 로고
    • The Pfam protein families database
    • Punta, M, Penny, CC and Ruth, YE et al. The Pfam protein families database. Nucleic Acids Res 2012; 40: D290-301.
    • (2012) Nucleic Acids Res , vol.40 , pp. D290-D301
    • Punta, M.1    Penny, C.C.2    Ruth, Y.E.3
  • 36
    • 30644478471 scopus 로고    scopus 로고
    • Regulation of polymerase II transcription by 7SK snRNA: two distinct RNA elements direct P-TEFb and HEXIM1 binding
    • Egloff, S, Van Herreweghe, E and Kiss, T. Regulation of polymerase II transcription by 7SK snRNA: two distinct RNA elements direct P-TEFb and HEXIM1 binding. Mol Cell Biol 2006; 26: 630-42.
    • (2006) Mol Cell Biol , vol.26 , pp. 630-642
    • Egloff, S.1    Van Herreweghe, E.2    Kiss, T.3
  • 37
    • 77954572735 scopus 로고    scopus 로고
    • Long noncoding RNA asmodular scaffold of histone modification complexes
    • Tsai, MC, Manor, O and Wan, Y et al. Long noncoding RNA asmodular scaffold of histone modification complexes. Science 2010; 329: 689-93.
    • (2010) Science , vol.329 , pp. 689-693
    • Tsai, M.C.1    Manor, O.2    Wan, Y.3
  • 38
    • 77958576363 scopus 로고    scopus 로고
    • Interaction of noncoding RNA with the rDNA promoter mediates recruitment of DNMT3b and silencing of rRNA genes
    • Schmitz, KM, Mayer, C and Postepska, A et al. Interaction of noncoding RNA with the rDNA promoter mediates recruitment of DNMT3b and silencing of rRNA genes. Gene Dev 2010; 24: 2264-9.
    • (2010) Gene Dev , vol.24 , pp. 2264-2269
    • Schmitz, K.M.1    Mayer, C.2    Postepska, A.3
  • 39
    • 0033515637 scopus 로고    scopus 로고
    • A steroid receptor coactivator, SRA, functions as an RNA and is present in an SRC-1 complex
    • Lanz, RB, McKenna, NJ and Onate, SA et al. A steroid receptor coactivator, SRA, functions as an RNA and is present in an SRC-1 complex. Cell 1999; 97: 17-27.
    • (1999) Cell , vol.97 , pp. 17-27
    • Lanz, R.B.1    McKenna, N.J.2    Onate, S.A.3
  • 40
    • 77957243921 scopus 로고    scopus 로고
    • Long noncoding RNAs with enhancer-like function in human cells
    • Ørom, UA, Derrien, T and Beringer, M et al. Long noncoding RNAs with enhancer-like function in human cells. Cell 2010; 143: 46-58.
    • (2010) Cell , vol.143 , pp. 46-58
    • Ørom, U.A.1    Derrien, T.2    Beringer, M.3
  • 41
    • 33750814968 scopus 로고    scopus 로고
    • Antisense transcription controls cell fate in Saccharomyces cerevisiae
    • Hongay, CF, Grisafi, PL and Galitski, T et al. Antisense transcription controls cell fate in Saccharomyces cerevisiae. Cell 2006; 127: 735-45.
    • (2006) Cell , vol.127 , pp. 735-745
    • Hongay, C.F.1    Grisafi, P.L.2    Galitski, T.3
  • 42
    • 34250743796 scopus 로고    scopus 로고
    • Transcriptional interferences in cis natural antisense transcripts of humans and mice
    • Osato, N, Suzuki, Y and Ikeo, K et al. Transcriptional interferences in cis natural antisense transcripts of humans and mice. 2007; Genetics 176: 1299-306.
    • (2007) Genetics , vol.176 , pp. 1299-1306
    • Osato, N.1    Suzuki, Y.2    Ikeo, K.3
  • 43
    • 84864327800 scopus 로고    scopus 로고
    • Bedrock displacements in Greenland manifest ice mass variations, climate cycles and climate change
    • Bevis, M, Wahr, J and Khan, SA et al. Bedrock displacements in Greenland manifest ice mass variations, climate cycles and climate change. Proc Natl Acad Sci USA 2012; 109: 11944-8.
    • (2012) Proc Natl Acad Sci USA , vol.109 , pp. 11944-11948
    • Bevis, M.1    Wahr, J.2    Khan, S.A.3
  • 44
    • 39549103642 scopus 로고    scopus 로고
    • Human Alu RNA is a modular transacting repressor ofmRNA transcription during heat shock
    • Mariner, PD, Walters, RD and Espinoza, CA et al. Human Alu RNA is a modular transacting repressor ofmRNA transcription during heat shock. Mol Cell 2008; 29: 499-509.
    • (2008) Mol Cell , vol.29 , pp. 499-509
    • Mariner, P.D.1    Walters, R.D.2    Espinoza, C.A.3
  • 45
    • 79959756263 scopus 로고    scopus 로고
    • Extensive and coordinated transcription of noncoding RNAs within cell-cycle promoters
    • Hung, T, Wang, Y and Lin, MF et al. Extensive and coordinated transcription of noncoding RNAs within cell-cycle promoters. Nat Genet 2011; 43: 621-9.
    • (2011) Nat Genet , vol.43 , pp. 621-629
    • Hung, T.1    Wang, Y.2    Lin, M.F.3
  • 46
    • 84879695128 scopus 로고    scopus 로고
    • Functional roles of enhancer RNAs for oestrogen-dependent transcriptional activation
    • Li, W, Notani, D and Ma, Q et al. Functional roles of enhancer RNAs for oestrogen-dependent transcriptional activation. Nature 2013; 498: 516-20.
    • (2013) Nature , vol.498 , pp. 516-520
    • Li, W.1    Notani, D.2    Ma, Q.3
  • 47
    • 84883132550 scopus 로고    scopus 로고
    • lncRNA-dependent mechanisms of androgenreceptor-regulated gene activation programs
    • Yang, L, Lin, C and Jin, C et al. lncRNA-dependent mechanisms of androgenreceptor-regulated gene activation programs. Nature 2013; 500: 598-602.
    • (2013) Nature , vol.500 , pp. 598-602
    • Yang, L.1    Lin, C.2    Jin, C.3
  • 48
    • 0020218702 scopus 로고
    • Mechanism of protein translocation across the endoplasmic reticulum
    • Walter, P and Blobel, G. Mechanism of protein translocation across the endoplasmic reticulum. Biochem Soc Symp 1982; 47: 183-91.
    • (1982) Biochem Soc Symp , vol.47 , pp. 183-191
    • Walter, P.1    Blobel, G.2
  • 49
    • 33846930357 scopus 로고    scopus 로고
    • Repression of the human dihydrofolate reductase gene by a non-coding interfering transcript
    • Martianov, I, Ramadass, A and Serra Barros, A et al. Repression of the human dihydrofolate reductase gene by a non-coding interfering transcript. Nature 2007; 445: 666-70.
    • (2007) Nature , vol.445 , pp. 666-670
    • Martianov, I.1    Ramadass, A.2    Serra Barros, A.3
  • 50
    • 46649093597 scopus 로고    scopus 로고
    • Induced ncRNAs allosterically modify RNAbinding proteins in cis to inhibit transcription
    • Wang, X, Arai, S and Song, X et al. Induced ncRNAs allosterically modify RNAbinding proteins in cis to inhibit transcription. Nature 2008; 454: 126-30.
    • (2008) Nature , vol.454 , pp. 126-130
    • Wang, X.1    Arai, S.2    Song, X.3
  • 51
    • 79953748673 scopus 로고    scopus 로고
    • A long noncoding RNA maintains active chromatin to coordinate homeotic gene expression
    • Wang, KC, Yang, YW and Liu, B et al. A long noncoding RNA maintains active chromatin to coordinate homeotic gene expression. Nature 2011; 472: 120-4.
    • (2011) Nature , vol.472 , pp. 120-124
    • Wang, K.C.1    Yang, Y.W.2    Liu, B.3
  • 52
    • 80052869283 scopus 로고    scopus 로고
    • lincRNAs act in the circuitry controlling pluripotency and differentiation
    • Guttman, M, Donaghey, J and Carey, BW et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011; 477: 295-300.
    • (2011) Nature , vol.477 , pp. 295-300
    • Guttman, M.1    Donaghey, J.2    Carey, B.W.3
  • 53
    • 79959198166 scopus 로고    scopus 로고
    • Reprogramming transcription by distinct classes of enhancers functionally defined by eRNA
    • Wang, D, Garcia-Bassets, I and Benner, C et al. Reprogramming transcription by distinct classes of enhancers functionally defined by eRNA. Nature 2011; 474: 390-4.
    • (2011) Nature , vol.474 , pp. 390-394
    • Wang, D.1    Garcia-Bassets, I.2    Benner, C.3
  • 54
    • 77952367798 scopus 로고    scopus 로고
    • Widespread transcription at neuronal activity-regulated enhancers
    • Kim, TK, Hemberg, M and Gray, JM et al. Widespread transcription at neuronal activity-regulated enhancers. Nature 2010; 465: 182-7.
    • (2010) Nature , vol.465 , pp. 182-187
    • Kim, T.K.1    Hemberg, M.2    Gray, J.M.3
  • 55
    • 84873456575 scopus 로고    scopus 로고
    • eRNAs are required for p53-dependent enhancer activity and gene transcription
    • Melo, CA, Drost, J and Wijchers, PJ et al. eRNAs are required for p53-dependent enhancer activity and gene transcription. Mol Cell 2013; 49: 524-35.
    • (2013) Mol Cell , vol.49 , pp. 524-535
    • Melo, C.A.1    Drost, J.2    Wijchers, P.J.3
  • 56
    • 84874368349 scopus 로고    scopus 로고
    • Activating RNAs associate with Mediator to enhance chromatin architecture and transcription
    • Lai, F, Orom, UA and Cesaroni, M et al. Activating RNAs associate with Mediator to enhance chromatin architecture and transcription. Nature 2013; 494: 497-501.
    • (2013) Nature , vol.494 , pp. 497-501
    • Lai, F.1    Orom, U.A.2    Cesaroni, M.3
  • 57
    • 33644514069 scopus 로고    scopus 로고
    • Noncoding RNAs of trithorax response elements recruit Drosophila Ash1 to Ultrabithorax
    • Sanchez-Elsner, T, Gou, D and Kremmer, E et al. Noncoding RNAs of trithorax response elements recruit Drosophila Ash1 to Ultrabithorax. Science 2006; 311: 1118-23.
    • (2006) Science , vol.311 , pp. 1118-1123
    • Sanchez-Elsner, T.1    Gou, D.2    Kremmer, E.3
  • 58
    • 57849140661 scopus 로고    scopus 로고
    • Divergent transcription from active promoters
    • Seila, AC, Calabrese, JM and Levine, SS et al. Divergent transcription from active promoters. Science 2008; 322: 1849-51.
    • (2008) Science , vol.322 , pp. 1849-1851
    • Seila, A.C.1    Calabrese, J.M.2    Levine, S.S.3
  • 59
    • 57849109058 scopus 로고    scopus 로고
    • Nascent RNA sequencing reveals widespread pausing and divergent initiation at human promoters
    • Core, LJ, Waterfall, JJ and Lis, JT. Nascent RNA sequencing reveals widespread pausing and divergent initiation at human promoters. Science 2008; 322: 1845-8.
    • (2008) Science , vol.322 , pp. 1845-1848
    • Core, L.J.1    Waterfall, J.J.2    Lis, J.T.3
  • 60
    • 84880510553 scopus 로고    scopus 로고
    • Promoter directionality is controlled by U1 snRNP and polyadenylation signals
    • Almada, AE, Wu, X and Kriz, AJ et al. Promoter directionality is controlled by U1 snRNP and polyadenylation signals. Nature 2013; 499: 360-3.
    • (2013) Nature , vol.499 , pp. 360-363
    • Almada, A.E.1    Wu, X.2    Kriz, A.J.3
  • 61
    • 78649847070 scopus 로고    scopus 로고
    • U1 snRNP protects pre-mRNAs from premature cleavage and polyadenylation
    • Kaida, D, Berg, MG and Younis, I et al. U1 snRNP protects pre-mRNAs from premature cleavage and polyadenylation. Nature 2010; 468: 664-8.
    • (2010) Nature , vol.468 , pp. 664-668
    • Kaida, D.1    Berg, M.G.2    Younis, I.3
  • 62
    • 84871699564 scopus 로고    scopus 로고
    • Promoter-proximal pausing of RNA polymerase II: emerging roles in metazoans
    • Adelman, K and Lis, JT. Promoter-proximal pausing of RNA polymerase II: emerging roles in metazoans. Nat Rev Genet 2012; 13: 720-31.
    • (2012) Nat Rev Genet , vol.13 , pp. 720-731
    • Adelman, K.1    Lis, J.T.2
  • 63
    • 84861857476 scopus 로고    scopus 로고
    • RNA polymerase II elongation control
    • Zhou, Q, Li, T and Price, DH. RNA polymerase II elongation control. Annu Rev Biochem 2012; 81: 119-43.
    • (2012) Annu Rev Biochem , vol.81 , pp. 119-143
    • Zhou, Q.1    Li, T.2    Price, D.H.3
  • 64
    • 84877721757 scopus 로고    scopus 로고
    • SR proteins collaborate with 7SK and promoter-associated nascent RNA to release paused polymerase
    • Ji, X, Zhou, Y and Pandit, S et al. SR proteins collaborate with 7SK and promoter-associated nascent RNA to release paused polymerase. Cell 2013; 153: 855-68.
    • (2013) Cell , vol.153 , pp. 855-868
    • Ji, X.1    Zhou, Y.2    Pandit, S.3
  • 65
    • 84887460647 scopus 로고    scopus 로고
    • PRC2 binds active promoters and contacts nascent RNAs in embryonic stem cells
    • Kaneko, S, Son, J and Shen, SS et al. PRC2 binds active promoters and contacts nascent RNAs in embryonic stem cells. Nat Struct Mol Biol 2013; 20: 1258-64.
    • (2013) Nat Struct Mol Biol , vol.20 , pp. 1258-1264
    • Kaneko, S.1    Son, J.2    Shen, S.S.3
  • 66
    • 79961170994 scopus 로고    scopus 로고
    • A ceRNA hypothesis: the Rosetta Stone of a hidden RNA language?
    • Salmena, L, Poliseno, L and Tay, Y et al. A ceRNA hypothesis: the Rosetta Stone of a hidden RNA language? Cell 2011; 146: 353-8.
    • (2011) Cell , vol.146 , pp. 353-358
    • Salmena, L.1    Poliseno, L.2    Tay, Y.3
  • 67
    • 77953957633 scopus 로고    scopus 로고
    • A coding-independent function of gene and pseudogene mRNAs regulates tumour biology
    • Poliseno, L, Salmena, L and Zhang, J et al. A coding-independent function of gene and pseudogene mRNAs regulates tumour biology. Nature 2010; 465: 1033-8.
    • (2010) Nature , vol.465 , pp. 1033-1038
    • Poliseno, L.1    Salmena, L.2    Zhang, J.3
  • 68
    • 84879987789 scopus 로고    scopus 로고
    • lincRNAs: genomics, evolution, and mechanisms
    • Ulitsky, I and Bartel, DP. lincRNAs: genomics, evolution, and mechanisms. Cell 2013; 154: 26-46.
    • (2013) Cell , vol.154 , pp. 26-46
    • Ulitsky, I.1    Bartel, D.P.2
  • 69
    • 84885374473 scopus 로고    scopus 로고
    • The imprinted H19 lncRNA antagonizes let-7 microRNAs
    • Kallen, AN, Zhou, XB and Xu, J et al. The imprinted H19 lncRNA antagonizes let-7 microRNAs. Mol Cell 2013; 52: 101-12.
    • (2013) Mol Cell , vol.52 , pp. 101-112
    • Kallen, A.N.1    Zhou, X.B.2    Xu, J.3
  • 70
    • 77951638287 scopus 로고    scopus 로고
    • Noncoding RNA gas5 is a growth arrestand starvation-associated repressor of the glucocorticoid receptor
    • Kino, T, Hurt, DE and Ichijo, T et al. Noncoding RNA gas5 is a growth arrestand starvation-associated repressor of the glucocorticoid receptor. Sci Signal 2010; 3: ra8.
    • (2010) Sci Signal , vol.3
    • Kino, T.1    Hurt, D.E.2    Ichijo, T.3
  • 71
    • 84869151299 scopus 로고    scopus 로고
    • Stable intronic sequence RNA (sisRNA), a new class of noncoding RNA from the oocyte nucleus of Xenopus tropicalis
    • Gardner, EJ, Nizami, ZF and Talbot, CC, Jr et al. Stable intronic sequence RNA (sisRNA), a new class of noncoding RNA from the oocyte nucleus of Xenopus tropicalis. Gene Dev 2012; 26: 2550-9.
    • (2012) Gene Dev , vol.26 , pp. 2550-2559
    • Gardner, E.J.1    Nizami, Z.F.2    Talbot, C.C.3
  • 72
    • 84875372911 scopus 로고    scopus 로고
    • Natural RNA circles function as efficient microRNA sponges
    • Hansen, TB, Jensen, TI and Clausen, BH et al. Natural RNA circles function as efficient microRNA sponges. Nature 2013; 495: 384-8.
    • (2013) Nature , vol.495 , pp. 384-388
    • Hansen, T.B.1    Jensen, T.I.2    Clausen, B.H.3
  • 73
    • 84875369248 scopus 로고    scopus 로고
    • Circular RNAs are a large class of animal RNAs with regulatory potency
    • Memczak, S, Jens, M and Elefsinioti, A et al. Circular RNAs are a large class of animal RNAs with regulatory potency. Nature 2013; 495: 333-8.
    • (2013) Nature , vol.495 , pp. 333-338
    • Memczak, S.1    Jens, M.2    Elefsinioti, A.3
  • 74
    • 84884566546 scopus 로고    scopus 로고
    • Circular intronic long noncoding RNAs
    • Zhang, Y, Zhang, XO and Chen, T et al. Circular intronic long noncoding RNAs. Mol Cell 2013; 51: 792-806.
    • (2013) Mol Cell , vol.51 , pp. 792-806
    • Zhang, Y.1    Zhang, X.O.2    Chen, T.3
  • 75
    • 84868152631 scopus 로고    scopus 로고
    • Long noncoding RNAs with snoRNA ends
    • Yin, QF, Yang, L and Zhang, Y et al. Long noncoding RNAs with snoRNA ends. Mol Cell 2012; 48: 219-30.
    • (2012) Mol Cell , vol.48 , pp. 219-230
    • Yin, Q.F.1    Yang, L.2    Zhang, Y.3
  • 76
    • 84869846717 scopus 로고    scopus 로고
    • Formation of triple-helical structures by the 3'-end sequences of MALAT1 and MENßnoncoding RNAs
    • Brown, JA, Valenstein, ML and Yario, TA et al. Formation of triple-helical structures by the 3'-end sequences of MALAT1 and MENßnoncoding RNAs. Proc Natl Acad Sci USA 2012; 109: 19202-7.
    • (2012) Proc Natl Acad Sci USA , vol.109 , pp. 19202-19207
    • Brown, J.A.1    Valenstein, M.L.2    Yario, T.A.3
  • 77
    • 84868519473 scopus 로고    scopus 로고
    • A triple helix stabilizes the 3' ends of long noncoding RNAs that lack poly(A) tails
    • Wilusz, JE, JnBaptiste, CK and Lu, LY et al. A triple helix stabilizes the 3' ends of long noncoding RNAs that lack poly(A) tails. Gene Dev 2012; 26: 2392-407.
    • (2012) Gene Dev , vol.26 , pp. 2392-2407
    • Wilusz, J.E.1    JnBaptiste, C.K.2    Lu, L.Y.3
  • 78
    • 78649422018 scopus 로고    scopus 로고
    • Poly(A) tail recognition by a viral RNA element through assembly of a triple helix
    • Mitton-Fry, RM, DeGregorio, SJ and Wang, J et al. Poly(A) tail recognition by a viral RNA element through assembly of a triple helix. Science 2010; 330: 1244-7.
    • (2010) Science , vol.330 , pp. 1244-1247
    • Mitton-Fry, R.M.1    DeGregorio, S.J.2    Wang, J.3
  • 79
    • 84861577379 scopus 로고    scopus 로고
    • An unconventional role for miRNA: let-7 activates Toll-like receptor 7 and causes neurodegeneration
    • Lehmann, SM, Krüger, C and Park, B et al. An unconventional role for miRNA: let-7 activates Toll-like receptor 7 and causes neurodegeneration. Nat Neurosci 2012; 15: 827-35.
    • (2012) Nat Neurosci , vol.15 , pp. 827-835
    • Lehmann, S.M.1    Krüger, C.2    Park, B.3
  • 80
    • 84872385444 scopus 로고    scopus 로고
    • piRNA-triggered MIWI ubiquitination and removal by APC/C in late spermatogenesis
    • Zhao, S, Gou, LT and Zhang, M et al. piRNA-triggered MIWI ubiquitination and removal by APC/C in late spermatogenesis. Dev Cell 2013; 24: 13-25.
    • (2013) Dev Cell , vol.24 , pp. 13-25
    • Zhao, S.1    Gou, L.T.2    Zhang, M.3
  • 81
    • 69949132008 scopus 로고    scopus 로고
    • Paraspeckles: nuclear bodies built on long noncoding RNA
    • Bond, CS and Fox, AH. Paraspeckles: nuclear bodies built on long noncoding RNA. J Cell Biol 2009; 186: 637-44.
    • (2009) J Cell Biol , vol.186 , pp. 637-644
    • Bond, C.S.1    Fox, A.H.2
  • 82
    • 0037039475 scopus 로고    scopus 로고
    • Paraspeckles: a novel nuclear domain
    • Fox, AH, Lam, YW and Leung, AK et al. Paraspeckles: a novel nuclear domain. Curr Biol 2002; 12: 13-25.
    • (2002) Curr Biol , vol.12 , pp. 13-25
    • Fox, A.H.1    Lam, Y.W.2    Leung, A.K.3
  • 83
    • 84893452948 scopus 로고    scopus 로고
    • Long noncoding RNA NEAT1-dependent SFPQ relocation from promoter region to paraspeckle mediates IL8 expression upon immune stimuli
    • Imamura, K, Imamachi, N and Akizuki, G et al. Long noncoding RNA NEAT1-dependent SFPQ relocation from promoter region to paraspeckle mediates IL8 expression upon immune stimuli. Mol Cell 2014; 53: 393-406.
    • (2014) Mol Cell , vol.53 , pp. 393-406
    • Imamura, K.1    Imamachi, N.2    Akizuki, G.3
  • 84
    • 84867575580 scopus 로고    scopus 로고
    • Alternative 3'-end processing of long noncoding RNA initiates construction of nuclear paraspeckles
    • Naganuma, T, Nakagawa, S and Tanigawa, A et al. Alternative 3'-end processing of long noncoding RNA initiates construction of nuclear paraspeckles. EMBO J 2012; 31: 4020-34.
    • (2012) EMBO J , vol.31 , pp. 4020-4034
    • Naganuma, T.1    Nakagawa, S.2    Tanigawa, A.3
  • 85
    • 26844440157 scopus 로고    scopus 로고
    • Regulating gene expression through RNA nuclear retention
    • Prasanth, KV, Prasanth, SG and Xuan, Z et al. Regulating gene expression through RNA nuclear retention. Cell 2005; 123: 249-63.
    • (2005) Cell , vol.123 , pp. 249-263
    • Prasanth, K.V.1    Prasanth, S.G.2    Xuan, Z.3
  • 86
    • 84862833549 scopus 로고    scopus 로고
    • Long noncoding RNAs in mammalian cells: what, where, and why?
    • Chen, LL and Carmichael, GG. Long noncoding RNAs in mammalian cells: what, where, and why? Wiley Interdiscip Rev RNA 2010; 1: 2-21.
    • (2010) Wiley Interdiscip Rev RNA , vol.1 , pp. 2-21
    • Chen, L.L.1    Carmichael, G.G.2
  • 87
    • 68949212914 scopus 로고    scopus 로고
    • Altered nuclear retention of mRNAs containing inverted repeats in human embryonic stem cells: functional role of a nuclear noncoding RNA
    • Chen, LL and Carmichael, GG. Altered nuclear retention of mRNAs containing inverted repeats in human embryonic stem cells: functional role of a nuclear noncoding RNA. Mol Cell 2009; 35: 467-78.
    • (2009) Mol Cell , vol.35 , pp. 467-478
    • Chen, L.L.1    Carmichael, G.G.2
  • 88
    • 62549117314 scopus 로고    scopus 로고
    • An architectural role for a nuclear noncoding RNA: NEAT1 RNA is essential for the structure of paraspeckles
    • Clemson, CM, Hutchinson, JN and Sara, SA et al. An architectural role for a nuclear noncoding RNA: NEAT1 RNA is essential for the structure of paraspeckles. Mol Cell 2009; 33: 717-26.
    • (2009) Mol Cell , vol.33 , pp. 717-726
    • Clemson, C.M.1    Hutchinson, J.N.2    Sara, S.A.3
  • 89
    • 78650511795 scopus 로고    scopus 로고
    • Direct visualization of the cotranscriptional assembly of a nuclear body by noncoding RNAs
    • Mao, YS, Sunwoo, H and Zhang, B et al. Direct visualization of the cotranscriptional assembly of a nuclear body by noncoding RNAs. Nat Cell Biol 2011; 13: 95-101.
    • (2011) Nat Cell Biol , vol.13 , pp. 95-101
    • Mao, Y.S.1    Sunwoo, H.2    Zhang, B.3
  • 90
    • 0025115231 scopus 로고
    • Factor required for mammalian spliceosome assembly is localized to discrete regions in the nucleus
    • Fu, XD and Maniatis, T. Factor required for mammalian spliceosome assembly is localized to discrete regions in the nucleus. Nature 1990; 343: 437-41.
    • (1990) Nature , vol.343 , pp. 437-441
    • Fu, X.D.1    Maniatis, T.2
  • 93
    • 67649671966 scopus 로고    scopus 로고
    • SR proteins in vertical integration of gene expression from transcription to RNA processing to translation
    • Zhong, XY, Wang, P and Han, J et al. SR proteins in vertical integration of gene expression from transcription to RNA processing to translation. Mol Cell 2009; 35: 1-10.
    • (2009) Mol Cell , vol.35 , pp. 1-10
    • Zhong, X.Y.1    Wang, P.2    Han, J.3
  • 94
    • 56349113455 scopus 로고    scopus 로고
    • 3' end processing of a long nuclearretained noncoding RNA yields a tRNA-like cytoplasmic RNA
    • Wilusz, JE, Freier, SM and Spector, DL. 3' end processing of a long nuclearretained noncoding RNA yields a tRNA-like cytoplasmic RNA. Cell 2008; 135: 919-32.
    • (2008) Cell , vol.135 , pp. 919-932
    • Wilusz, J.E.1    Freier, S.M.2    Spector, D.L.3
  • 95
    • 84864315112 scopus 로고    scopus 로고
    • The lncRNA Malat1 is dispensable for mouse development but its transcription plays a cis-regulatory role in the adult
    • Zhang, B, Arun, G and Mao, YS et al. The lncRNA Malat1 is dispensable for mouse development but its transcription plays a cis-regulatory role in the adult. Cell Rep 2012; 2: 111-23.
    • (2012) Cell Rep , vol.2 , pp. 111-123
    • Zhang, B.1    Arun, G.2    Mao, Y.S.3
  • 96
    • 77956927823 scopus 로고    scopus 로고
    • The nuclear-retained noncoding RNA MALAT1 regulates alternative splicing by modulating SR splicing factor phosphorylation
    • Tripathi, V, Ellis, JD and Shen, Z et al. The nuclear-retained noncoding RNA MALAT1 regulates alternative splicing by modulating SR splicing factor phosphorylation. Mol Cell 2010; 39: 925-38.
    • (2010) Mol Cell , vol.39 , pp. 925-938
    • Tripathi, V.1    Ellis, J.D.2    Shen, Z.3
  • 97
    • 33847185603 scopus 로고    scopus 로고
    • A screen for nuclear transcripts identifies two linked noncoding RNAs associated with SC35 splicing domains
    • Hutchinson, JN, Ensminger, AW and Clemson, CM et al. A screen for nuclear transcripts identifies two linked noncoding RNAs associated with SC35 splicing domains. BMC Genomics 2007; 8: 39.
    • (2007) BMC Genomics , vol.8 , pp. 39
    • Hutchinson, J.N.1    Ensminger, A.W.2    Clemson, C.M.3
  • 98
    • 84873451950 scopus 로고    scopus 로고
    • The noncoding RNA MALAT1 is a critical regulator of the metastasis phenotype of lung cancer cells
    • Gutschner, T, Hämmerle, M and Eissmann, M et al. The noncoding RNA MALAT1 is a critical regulator of the metastasis phenotype of lung cancer cells. Cancer Res 2013; 73: 1180-9.
    • (2013) Cancer Res , vol.73 , pp. 1180-1189
    • Gutschner, T.1    Hämmerle, M.2    Eissmann, M.3
  • 99
    • 79955506825 scopus 로고    scopus 로고
    • Paraspeckles are subpopulation-specific nuclear bodies that are not essential in mice
    • Nakagawa, S, Naganuma, T and Shioi, G et al. Paraspeckles are subpopulation-specific nuclear bodies that are not essential in mice. J Cell Biol 2011; 193: 31-9.
    • (2011) J Cell Biol , vol.193 , pp. 31-39
    • Nakagawa, S.1    Naganuma, T.2    Shioi, G.3
  • 100
    • 67650921949 scopus 로고    scopus 로고
    • Many human large intergenic noncoding RNAs associate with chromatin-modifying complexes and affect gene expression
    • Khalil, AM, Guttman, M and Huarte, M et al. Many human large intergenic noncoding RNAs associate with chromatin-modifying complexes and affect gene expression. Proc Natl Acad Sci USA 2009; 106: 11667-72.
    • (2009) Proc Natl Acad Sci USA , vol.106 , pp. 11667-11672
    • Khalil, A.M.1    Guttman, M.2    Huarte, M.3
  • 101
    • 81055140863 scopus 로고    scopus 로고
    • ncRNA-and Pc2 methylation-dependent gene relocation between nuclear structures mediates gene activation programs
    • Yang, L, Lin, C and Liu, W et al. ncRNA-and Pc2 methylation-dependent gene relocation between nuclear structures mediates gene activation programs. Cell 2011; 147: 773-88.
    • (2011) Cell , vol.147 , pp. 773-788
    • Yang, L.1    Lin, C.2    Liu, W.3
  • 102
    • 84896840947 scopus 로고    scopus 로고
    • Stable C0T-1 repeat RNA is abundant and is associated with euchromatic interphase chromosomes
    • Hall, LL, Carone, DM and Gomez, AV et al. Stable C0T-1 repeat RNA is abundant and is associated with euchromatic interphase chromosomes. Cell 2014; 156: 907-19.
    • (2014) Cell , vol.156 , pp. 907-919
    • Hall, L.L.1    Carone, D.M.2    Gomez, A.V.3
  • 103
    • 77954257796 scopus 로고    scopus 로고
    • Secreted monocytic miR-150 enhances targeted endothelial cell migration
    • Zhang, Y, Liu, D and Chen, X et al. Secreted monocytic miR-150 enhances targeted endothelial cell migration. Mol Cell 2010; 39: 133-44.
    • (2010) Mol Cell , vol.39 , pp. 133-144
    • Zhang, Y.1    Liu, D.2    Chen, X.3
  • 104
    • 84886040203 scopus 로고    scopus 로고
    • Trash or Treasure: extracellular microRNAs and cell-to-cell communication
    • Kosaka, N, Yoshioka, Y and Hagiwara, K et al. Trash or Treasure: extracellular microRNAs and cell-to-cell communication. Front Genet 2013; 4: 173.
    • (2013) Front Genet , vol.4 , pp. 173
    • Kosaka, N.1    Yoshioka, Y.2    Hagiwara, K.3
  • 105
    • 79953301730 scopus 로고    scopus 로고
    • MicroRNAs are transported in plasma and delivered to recipient cells by high-density lipoproteins
    • Vickers, KC, Palmisano, BT and Shoucri, BMet al. MicroRNAs are transported in plasma and delivered to recipient cells by high-density lipoproteins. Nat Cell Biol 2011; 13: 423-33.
    • (2011) Nat Cell Biol , vol.13 , pp. 423-433
    • Vickers, K.C.1    Palmisano, B.T.2    Shoucri, B.M.3
  • 106
    • 84881245624 scopus 로고    scopus 로고
    • Circulating microRNAs as biomarkers for disease staging in multiple sclerosis
    • Gandhi, R, Healy, B and Gholipour, T et al. Circulating microRNAs as biomarkers for disease staging in multiple sclerosis. Ann Neurol 2013; 73: 729-40.
    • (2013) Ann Neurol , vol.73 , pp. 729-740
    • Gandhi, R.1    Healy, B.2    Gholipour, T.3
  • 107
    • 84855813448 scopus 로고    scopus 로고
    • A microRNA regulon that mediates endothelial recruitment and metastasis by cancer cells
    • Png, KJ, Halberg, N and Yoshida, M et al. A microRNA regulon that mediates endothelial recruitment and metastasis by cancer cells. Nature 2012; 481: 190-4.
    • (2012) Nature , vol.481 , pp. 190-194
    • Png, K.J.1    Halberg, N.2    Yoshida, M.3
  • 108
    • 84864503916 scopus 로고    scopus 로고
    • MicroRNAs bind to Toll-like receptors to induce prometastatic inflammatory response
    • Fabbri, M, Paone, A and Calore, F et al. MicroRNAs bind to Toll-like receptors to induce prometastatic inflammatory response. Proc Natl Acad Sci USA 2012; 109: E2110-6.
    • (2012) Proc Natl Acad Sci USA , vol.109 , pp. E2110-E2116
    • Fabbri, M.1    Paone, A.2    Calore, F.3
  • 109
    • 84855502918 scopus 로고    scopus 로고
    • Exogenous plant MIR168a specifically targets mammalian LDLRAP1: evidence of cross-kingdom regulation by microRNA
    • Zhang, L, Hou, D and Chen, X et al. Exogenous plant MIR168a specifically targets mammalian LDLRAP1: evidence of cross-kingdom regulation by microRNA. Cell Res 2012; 22: 107-26.
    • (2012) Cell Res , vol.22 , pp. 107-126
    • Zhang, L.1    Hou, D.2    Chen, X.3
  • 110
    • 84887497048 scopus 로고    scopus 로고
    • Lack of detectable oral bioavailability of plant microRNAs after feeding in mice
    • Dickinson, B, Zhang, Y and Petrick, JS et al. Lack of detectable oral bioavailability of plant microRNAs after feeding in mice. Nat Biotechnol 2013; 31: 965-7.
    • (2013) Nat Biotechnol , vol.31 , pp. 965-967
    • Dickinson, B.1    Zhang, Y.2    Petrick, J.S.3
  • 111
    • 0025961771 scopus 로고
    • A gene from the region of the human X inactivation centre is expressed exclusively from the inactive X chromosome
    • Brown, CJ, Ballabio, A and Rupert, JL et al. A gene from the region of the human X inactivation centre is expressed exclusively from the inactive X chromosome. Nature 1991; 349: 38-44.
    • (1991) Nature , vol.349 , pp. 38-44
    • Brown, C.J.1    Ballabio, A.2    Rupert, J.L.3
  • 112
    • 84875177348 scopus 로고    scopus 로고
    • X-inactivation, imprinting, and long noncoding RNAs in health and disease
    • Lee, JT and Bartolomei, MS. X-inactivation, imprinting, and long noncoding RNAs in health and disease. Cell 2013; 152: 1308-23.
    • (2013) Cell , vol.152 , pp. 1308-1323
    • Lee, J.T.1    Bartolomei, M.S.2
  • 113
    • 84894265711 scopus 로고    scopus 로고
    • Control of Cdc28 CDK1 by a stressinduced lncRNA
    • Nadal-Ribelles, M, Solé, C and Xu, Z et al. Control of Cdc28 CDK1 by a stressinduced lncRNA. Mol Cell 2014; 53: 549-61.
    • (2014) Mol Cell , vol.53 , pp. 549-561
    • Nadal-Ribelles, M.1    Solé, C.2    Xu, Z.3
  • 114
    • 78649467088 scopus 로고    scopus 로고
    • Large intergenic non-coding RNA-RoR modulates reprogramming of human induced pluripotent stem cells
    • Loewer, S, Cabili, MN and Guttman, M et al. Large intergenic non-coding RNA-RoR modulates reprogramming of human induced pluripotent stem cells. Nat Genet 2010; 42: 1113-7.
    • (2010) Nat Genet , vol.42 , pp. 1113-1117
    • Loewer, S.1    Cabili, M.N.2    Guttman, M.3
  • 115
    • 50649118350 scopus 로고    scopus 로고
    • Long noncoding RNAs in mouse embryonic stem cell pluripotency and differentiation
    • Dinger, ME, Amaral, PP and Mercer, TR et al. Long noncoding RNAs in mouse embryonic stem cell pluripotency and differentiation. Genome Res 2008; 18: 1433-45.
    • (2008) Genome Res , vol.18 , pp. 1433-1445
    • Dinger, M.E.1    Amaral, P.P.2    Mercer, T.R.3
  • 116
    • 84872135457 scopus 로고    scopus 로고
    • Control of somatic tissue differentiation by the long non-coding RNA TINCR
    • Kretz, M, Siprashvili, Z and Chu, C et al. Control of somatic tissue differentiation by the long non-coding RNA TINCR. Nature 2013; 493: 231-5.
    • (2013) Nature , vol.493 , pp. 231-235
    • Kretz, M.1    Siprashvili, Z.2    Chu, C.3
  • 117
    • 84873829893 scopus 로고    scopus 로고
    • The tissue-specific lncRNA Fendrr is an essential regulator of heart and body wall development in the mouse
    • Grote, P, Wittler, L and Hendrix, D et al. The tissue-specific lncRNA Fendrr is an essential regulator of heart and body wall development in the mouse. Dev Cell 2013; 24: 206-14.
    • (2013) Dev Cell , vol.24 , pp. 206-214
    • Grote, P.1    Wittler, L.2    Hendrix, D.3
  • 118
    • 84873300214 scopus 로고    scopus 로고
    • Braveheart, a long noncoding RNA required for cardiovascular lineage commitment
    • Klattenhoff, CA, Scheuermann, JC and Surface, LE et al. Braveheart, a long noncoding RNA required for cardiovascular lineage commitment. Cell 2013; 152: 570-83.
    • (2013) Cell , vol.152 , pp. 570-583
    • Klattenhoff, C.A.1    Scheuermann, J.C.2    Surface, L.E.3
  • 119
    • 77951118936 scopus 로고    scopus 로고
    • Long non-coding RNA HOTAIR reprograms chromatin state to promote cancer metastasis
    • Gupta, RA, Shah, N and Wang, KC et al. Long non-coding RNA HOTAIR reprograms chromatin state to promote cancer metastasis. Nature 2010; 464: 1071-6.
    • (2010) Nature , vol.464 , pp. 1071-1076
    • Gupta, R.A.1    Shah, N.2    Wang, K.C.3
  • 120
    • 84874053510 scopus 로고    scopus 로고
    • Xist RNA is a potent suppressor of hematologic cancer in mice
    • Yildirim, E, Kirby, JE and Brown, DE et al. Xist RNA is a potent suppressor of hematologic cancer in mice. Cell 2013; 152: 727-42.
    • (2013) Cell , vol.152 , pp. 727-742
    • Yildirim, E.1    Kirby, J.E.2    Brown, D.E.3
  • 121
    • 46249106990 scopus 로고    scopus 로고
    • Mapping and quantifying mammalian transcriptomes by RNA-Seq
    • Mortazavi, A, Williams, BA and McCue, K et al. Mapping and quantifying mammalian transcriptomes by RNA-Seq. Nat Methods 2008; 5: 621-8.
    • (2008) Nat Methods , vol.5 , pp. 621-628
    • Mortazavi, A.1    Williams, B.A.2    McCue, K.3
  • 122
    • 84908375479 scopus 로고    scopus 로고
    • Multiplex analysis of polyA-linked sequences (MAPS): an RNA-seq strategy to profile poly(A+) RNA
    • Zhou, Y, Li, HR and Huang, J et al. Multiplex analysis of polyA-linked sequences (MAPS): an RNA-seq strategy to profile poly(A+) RNA. Methods Mol Biol 2014; 1125: 169-78.
    • (2014) Methods Mol Biol , vol.1125 , pp. 169-178
    • Zhou, Y.1    Li, H.R.2    Huang, J.3
  • 123
    • 41349094797 scopus 로고    scopus 로고
    • Transcription regulation through promoter-proximal pausing of RNA polymerase II
    • Core, LJ and Lis, JT. Transcription regulation through promoter-proximal pausing of RNA polymerase II. Science 2008; 319: 1791-2.
    • (2008) Science , vol.319 , pp. 1791-1792
    • Core, L.J.1    Lis, J.T.2
  • 124
    • 84873426026 scopus 로고    scopus 로고
    • Coordinated regulation of synthesis and stability of RNA during the acute TNF-induced proinflammatory response
    • Paulsen, MT, Veloso, A and Prasad, J et al. Coordinated regulation of synthesis and stability of RNA during the acute TNF-induced proinflammatory response. Proc Natl Acad Sci USA 2013; 110: 2240-5.
    • (2013) Proc Natl Acad Sci USA , vol.110 , pp. 2240-2245
    • Paulsen, M.T.1    Veloso, A.2    Prasad, J.3
  • 125
    • 75149163987 scopus 로고    scopus 로고
    • Conserved long noncoding RNAs transcriptionally regulated by Oct4 and Nanog modulate pluripotency in mouse embryonic stem cells
    • Sheik Mohamed, J, Gaughwin, PM and Lim, B et al. Conserved long noncoding RNAs transcriptionally regulated by Oct4 and Nanog modulate pluripotency in mouse embryonic stem cells. RNA 2010; 16: 324-37.
    • (2010) RNA , vol.16 , pp. 324-337
    • Sheik Mohamed, J.1    Gaughwin, P.M.2    Lim, B.3
  • 126
    • 84878871969 scopus 로고    scopus 로고
    • linc-HOXA1 is a noncoding RNA that represses Hoxa1 transcription in cis
    • Maamar, H, Cabili, MN and Rinn, J et al. linc-HOXA1 is a noncoding RNA that represses Hoxa1 transcription in cis. Gene Dev 2013; 27: 1260-71.
    • (2013) Gene Dev , vol.27 , pp. 1260-1271
    • Maamar, H.1    Cabili, M.N.2    Rinn, J.3
  • 127
    • 34848918150 scopus 로고    scopus 로고
    • Global analysis of mRNA localization reveals a prominent role in organizing cellular architecture and function
    • Lecuyer, E, Yoshida, H and Parthasarathy, N et al. Global analysis of mRNA localization reveals a prominent role in organizing cellular architecture and function. Cell 2007; 131: 174-87.
    • (2007) Cell , vol.131 , pp. 174-187
    • Lecuyer, E.1    Yoshida, H.2    Parthasarathy, N.3
  • 129
    • 84890549512 scopus 로고    scopus 로고
    • High-resolution Xist binding maps reveal two-step spreading during X-chromosome inactivation
    • Simon, MD, Pinter, SF and Fang, R et al. High-resolution Xist binding maps reveal two-step spreading during X-chromosome inactivation. Nature 2013; 504: 465-9.
    • (2013) Nature , vol.504 , pp. 465-469
    • Simon, M.D.1    Pinter, S.F.2    Fang, R.3
  • 130
    • 80054756754 scopus 로고    scopus 로고
    • Genomic maps of long noncoding RNA occupancy reveal principles of RNA-chromatin interactions
    • Chu, C, Qu, K and Zhong, FL et al. Genomic maps of long noncoding RNA occupancy reveal principles of RNA-chromatin interactions. Mol Cell 2011; 44: 667-78.
    • (2011) Mol Cell , vol.44 , pp. 667-678
    • Chu, C.1    Qu, K.2    Zhong, F.L.3
  • 131
    • 84894579192 scopus 로고    scopus 로고
    • Brd4 and JMJD6-associated anti-pause enhancers in regulation of transcriptional pause release
    • Liu, W, Ma, Q and Wong, K et al. Brd4 and JMJD6-associated anti-pause enhancers in regulation of transcriptional pause release. Cell 2013; 155: 1581-95.
    • (2013) Cell , vol.155 , pp. 1581-1595
    • Liu, W.1    Ma, Q.2    Wong, K.3
  • 133
    • 84893358533 scopus 로고    scopus 로고
    • Landscape and variation of RNA secondary structure across the human transcriptome
    • Wan, Y, Qu, K and Zhang, QC et al. Landscape and variation of RNA secondary structure across the human transcriptome. Nature 2014; 505: 706-9.
    • (2014) Nature , vol.505 , pp. 706-709
    • Wan, Y.1    Qu, K.2    Zhang, Q.C.3
  • 134
    • 84893427735 scopus 로고    scopus 로고
    • In vivo genome-wide profiling of RNA secondary structure reveals novel regulatory features
    • Ding, Y, Tang, Y and Kwok, CK et al. In vivo genome-wide profiling of RNA secondary structure reveals novel regulatory features. Nature 2014; 505: 696-700.
    • (2014) Nature , vol.505 , pp. 696-700
    • Ding, Y.1    Tang, Y.2    Kwok, C.K.3
  • 135
    • 84893351549 scopus 로고    scopus 로고
    • Genome-wide probing of RNA structure reveals active unfolding of mRNA structures in vivo
    • Rouskin, S, Zubradt, M and Washietl, S et al. Genome-wide probing of RNA structure reveals active unfolding of mRNA structures in vivo. Nature 2014; 505: 701-5.
    • (2014) Nature , vol.505 , pp. 701-705
    • Rouskin, S.1    Zubradt, M.2    Washietl, S.3
  • 136
    • 84869988685 scopus 로고    scopus 로고
    • MS2-TRAP (MS2-tagged RNA affinity purification): tagging RNA to identify associated miRNAs
    • Yoon, JH, Srikantan, S and Gorospe, M. MS2-TRAP (MS2-tagged RNA affinity purification): tagging RNA to identify associated miRNAs. Methods 2012; 58: 81-7.
    • (2012) Methods , vol.58 , pp. 81-87
    • Yoon, J.H.1    Srikantan, S.2    Gorospe, M.3
  • 137
    • 34249053165 scopus 로고    scopus 로고
    • RNA-based affinity purification reveals 7SK RNPs with distinct composition and regulation
    • Hogg, JR and Collins, K. RNA-based affinity purification reveals 7SK RNPs with distinct composition and regulation. RNA 2007; 13: 868-80.
    • (2007) RNA , vol.13 , pp. 868-880
    • Hogg, J.R.1    Collins, K.2
  • 138
    • 84884856342 scopus 로고    scopus 로고
    • Cas9 as a versatile tool for engineering biology
    • Mali, P, Esvelt, KM and Church, GM. Cas9 as a versatile tool for engineering biology. Nat Methods 2013; 10: 957-63.
    • (2013) Nat Methods , vol.10 , pp. 957-963
    • Mali, P.1    Esvelt, K.M.2    Church, G.M.3
  • 139
    • 84861969926 scopus 로고    scopus 로고
    • Insights into RNA biology from an atlas of mammalian mRNA-binding proteins
    • Castello, A, Fischer, B and Eichelbaum, K et al. Insights into RNA biology from an atlas of mammalian mRNA-binding proteins. Cell 2012; 149: 1393-406.
    • (2012) Cell , vol.149 , pp. 1393-1406
    • Castello, A.1    Fischer, B.2    Eichelbaum, K.3
  • 140
    • 34249316905 scopus 로고    scopus 로고
    • RNA-binding proteins: modular design for efficient function
    • Lunde, BM, Moore, C and Varani, G. RNA-binding proteins: modular design for efficient function. Nat Rev Mol Cell Biol 2007; 8: 479-90.
    • (2007) Nat Rev Mol Cell Biol , vol.8 , pp. 479-490
    • Lunde, B.M.1    Moore, C.2    Varani, G.3
  • 141
    • 84887419464 scopus 로고    scopus 로고
    • Promiscuous RNA binding by Polycomb repressive complex 2
    • Davidovich, C, Zheng, L and Goodrich, KJ et al. Promiscuous RNA binding by Polycomb repressive complex 2. Nat Struct Mol Biol 2013; 20: 1250-7.
    • (2013) Nat Struct Mol Biol , vol.20 , pp. 1250-1257
    • Davidovich, C.1    Zheng, L.2    Goodrich, K.J.3
  • 142
    • 84855916545 scopus 로고    scopus 로고
    • Protein-RNA interactions: new genomic technologies and perspectives
    • Konig, J, Zarnack, K and Luscombe, NM et al. Protein-RNA interactions: new genomic technologies and perspectives. Nat Rev Genet 2011; 13: 77-83.
    • (2011) Nat Rev Genet , vol.13 , pp. 77-83
    • Konig, J.1    Zarnack, K.2    Luscombe, N.M.3
  • 143
    • 84861705421 scopus 로고    scopus 로고
    • Cooperativity in RNA-protein interactions: global analysis of RNA binding specificity
    • Campbell, ZT, Bhimsaria, D and Valley, CT et al. Cooperativity in RNA-protein interactions: global analysis of RNA binding specificity. Cell Rep 2012; 1: 570-81.
    • (2012) Cell Rep , vol.1 , pp. 570-581
    • Campbell, Z.T.1    Bhimsaria, D.2    Valley, C.T.3
  • 144
    • 67650484984 scopus 로고    scopus 로고
    • Rapid and systematic analysis of the RNA recognition specificities of RNA-binding proteins
    • Ray, D, Kazan, H and Chan, ET et al. Rapid and systematic analysis of the RNA recognition specificities of RNA-binding proteins. Nat Biotechnol 2009; 27: 667-70.
    • (2009) Nat Biotechnol , vol.27 , pp. 667-670
    • Ray, D.1    Kazan, H.2    Chan, E.T.3
  • 145
    • 84862807502 scopus 로고    scopus 로고
    • Nuclear matrix factor hnRNP U/SAF-A exerts a global control of alternative splicing by regulating U2 snRNP maturation
    • Xiao, R, Tang, P and Yang, B et al. Nuclear matrix factor hnRNP U/SAF-A exerts a global control of alternative splicing by regulating U2 snRNP maturation. Mol Cell 2012; 45: 656-68.
    • (2012) Mol Cell , vol.45 , pp. 656-668
    • Xiao, R.1    Tang, P.2    Yang, B.3
  • 146
    • 84891818924 scopus 로고    scopus 로고
    • StarBase v2.0: decoding miRNA-ceRNA, miRNA-ncRNA and protein-RNA interaction networks from large-scale CLIPSeq data
    • Li, JH, Liu, S and Zhou, H et al. StarBase v2.0: decoding miRNA-ceRNA, miRNA-ncRNA and protein-RNA interaction networks from large-scale CLIPSeq data. Nucleic Acids Res 2014; 42: D92-7.
    • (2014) Nucleic Acids Res , vol.42 , pp. D92-D97
    • Li, J.H.1    Liu, S.2    Zhou, H.3
  • 147
    • 77955323879 scopus 로고    scopus 로고
    • A large intergenic noncoding RNA induced by p53 mediates global gene repression in the p53 response
    • Huarte, M, Guttman, M and Feldser, D et al. A large intergenic noncoding RNA induced by p53 mediates global gene repression in the p53 response. Cell 2010; 142: 409-19.
    • (2010) Cell , vol.142 , pp. 409-419
    • Huarte, M.1    Guttman, M.2    Feldser, D.3
  • 148
    • 33748582906 scopus 로고    scopus 로고
    • Crystal structure of a 70S ribosome-tRNA complex reveals functional interactions and rearrangements
    • Korostelev, A, Trakhanov, S and Laurberg, M et al. Crystal structure of a 70S ribosome-tRNA complex reveals functional interactions and rearrangements. Cell 2006; 126: 1065-77.
    • (2006) Cell , vol.126 , pp. 1065-1077
    • Korostelev, A.1    Trakhanov, S.2    Laurberg, M.3
  • 149
    • 33749354360 scopus 로고    scopus 로고
    • Structure of the 70S ribosome complexed with mRNA and tRNA
    • Selmer, M, Dunham, CM and Murphy, FV et al. Structure of the 70S ribosome complexed with mRNA and tRNA. Science 2006; 313: 1935-42.
    • (2006) Science , vol.313 , pp. 1935-1942
    • Selmer, M.1    Dunham, C.M.2    Murphy, F.V.3
  • 150
    • 70349961432 scopus 로고    scopus 로고
    • Nucleation, propagation and cleavage of target RNAs in Ago silencing complexes
    • Wang, Y, Juranek, S and Li, H et al. Nucleation, propagation and cleavage of target RNAs in Ago silencing complexes. Nature 2009; 461: 754-61.
    • (2009) Nature , vol.461 , pp. 754-761
    • Wang, Y.1    Juranek, S.2    Li, H.3
  • 151
    • 57749206034 scopus 로고    scopus 로고
    • Structure of an argonaute silencing complex with a seed-containing guide DNA and target RNA duplex
    • Wang, Y, Juranek, S and Li, H et al. Structure of an argonaute silencing complex with a seed-containing guide DNA and target RNA duplex. Nature 2008; 456: 921-6.
    • (2008) Nature , vol.456 , pp. 921-926
    • Wang, Y.1    Juranek, S.2    Li, H.3
  • 152
    • 56249145105 scopus 로고    scopus 로고
    • Structure of the guide-strandcontaining argonaute silencing complex
    • Wang, Y, Sheng, G and Juranek, S et al. Structure of the guide-strandcontaining argonaute silencing complex. Nature 2008; 456: 209-13.
    • (2008) Nature , vol.456 , pp. 209-213
    • Wang, Y.1    Sheng, G.2    Juranek, S.3
  • 153
    • 33748947672 scopus 로고    scopus 로고
    • Crystal structure of an H/ACA box ribonucleoprotein particle
    • Li, L and Ye, K. Crystal structure of an H/ACA box ribonucleoprotein particle. Nature 2006; 443: 302-7.
    • (2006) Nature , vol.443 , pp. 302-307
    • Li, L.1    Ye, K.2
  • 154
    • 84858800333 scopus 로고    scopus 로고
    • Structure and assembly of the SF3a splicing factor complex of U2 snRNP
    • Lin, PC and Xu, RM. Structure and assembly of the SF3a splicing factor complex of U2 snRNP. EMBO J 2012; 31: 1579-90.
    • (2012) EMBO J , vol.31 , pp. 1579-1590
    • Lin, P.C.1    Xu, R.M.2
  • 155
    • 84891757415 scopus 로고    scopus 로고
    • Multiple knockout mouse models reveal lincRNAs are required for life and brain development
    • Sauvageau, M, Goff, LA and Lodato, S et al. Multiple knockout mouse models reveal lincRNAs are required for life and brain development. Elife 2013; 2: e01749.
    • (2013) Elife , vol.2
    • Sauvageau, M.1    Goff, L.A.2    Lodato, S.3
  • 156
    • 84879410743 scopus 로고    scopus 로고
    • TALEN or Cas9-rapid, efficient and specific choices for genome modifications
    • Wei, C, Liu, J and Yu, Z et al. TALEN or Cas9-rapid, efficient and specific choices for genome modifications. J Genet Genomics 2013; 40: 281-9.
    • (2013) J Genet Genomics , vol.40 , pp. 281-289
    • Wei, C.1    Liu, J.2    Yu, Z.3
  • 157
    • 84875832964 scopus 로고    scopus 로고
    • RNA-protein analysis using a conditional CRISPR nuclease
    • Lee, HY, Haurwitz, RE and Apffel, A et al. RNA-protein analysis using a conditional CRISPR nuclease. Proc Natl Acad Sci USA 2013; 110: 5416-21.
    • (2013) Proc Natl Acad Sci USA , vol.110 , pp. 5416-5421
    • Lee, H.Y.1    Haurwitz, R.E.2    Apffel, A.3
  • 158
    • 84874687019 scopus 로고    scopus 로고
    • Repurposing CRISPR as an RNAguided platform for sequence-specific control of gene expression
    • Qi, LS, Larson, MH and Gilbert, LA et al. Repurposing CRISPR as an RNAguided platform for sequence-specific control of gene expression. Cell 2013; 152: 1173-83.
    • (2013) Cell , vol.152 , pp. 1173-1183
    • Qi, L.S.1    Larson, M.H.2    Gilbert, L.A.3
  • 159
    • 84886993480 scopus 로고    scopus 로고
    • CRISPR interference (CRISPRi) for sequence-specific control of gene expression
    • Larson, MH, Gilbert, LA and Wang, X et al. CRISPR interference (CRISPRi) for sequence-specific control of gene expression. Nat Protoc 2013; 8: 2180-96.
    • (2013) Nat Protoc , vol.8 , pp. 2180-2196
    • Larson, M.H.1    Gilbert, L.A.2    Wang, X.3
  • 160
    • 84880571335 scopus 로고    scopus 로고
    • CRISPR-mediated modular RNAguided regulation of transcription in eukaryotes
    • Gilbert, LA, Larson, MH and Morsut, L et al. CRISPR-mediated modular RNAguided regulation of transcription in eukaryotes. Cell 2013; 154: 442-51.
    • (2013) Cell , vol.154 , pp. 442-451
    • Gilbert, L.A.1    Larson, M.H.2    Morsut, L.3
  • 161
    • 84894063115 scopus 로고    scopus 로고
    • Dynamic imaging of genomic loci in living human cells by an optimized CRISPR/Cas system
    • Chen, B, Gilbert, LA and Cimini, BA et al. Dynamic imaging of genomic loci in living human cells by an optimized CRISPR/Cas system. Cell 2013; 155: 1479-91.
    • (2013) Cell , vol.155 , pp. 1479-1491
    • Chen, B.1    Gilbert, L.A.2    Cimini, B.A.3
  • 162
    • 46749083733 scopus 로고    scopus 로고
    • Expression of a noncoding RNA is elevated in Alzheimer's disease and drives rapid feed-forward regulation of beta-secretase
    • Faghihi, MA, Modarresi, F and Khalil, AM et al. Expression of a noncoding RNA is elevated in Alzheimer's disease and drives rapid feed-forward regulation of beta-secretase. Nat Med 2008; 14: 723-30.
    • (2008) Nat Med , vol.14 , pp. 723-730
    • Faghihi, M.A.1    Modarresi, F.2    Khalil, A.M.3
  • 163
    • 79951495822 scopus 로고    scopus 로고
    • lncRNAs transactivate STAU1-mediated mRNA decay by duplexing with 3' UTRs via Alu elements
    • Gong, C and Maquat, LE. lncRNAs transactivate STAU1-mediated mRNA decay by duplexing with 3' UTRs via Alu elements. Nature 2011; 470: 284-8.
    • (2011) Nature , vol.470 , pp. 284-288
    • Gong, C.1    Maquat, L.E.2
  • 164
    • 84888617099 scopus 로고    scopus 로고
    • Organizing principles of mammalian nonsensemediated mRNA decay
    • Popp, MW and Maquat, LE. Organizing principles of mammalian nonsensemediated mRNA decay. Annu Rev Genet 2013; 47: 139-65.
    • (2013) Annu Rev Genet , vol.47 , pp. 139-165
    • Popp, M.W.1    Maquat, L.E.2
  • 165
    • 84878865619 scopus 로고    scopus 로고
    • Ribosome profiling reveals resemblance between long non-coding RNAs and 5'' leaders of coding RNAs
    • Chew, GL, Pauli, A and Rinn, JL et al. Ribosome profiling reveals resemblance between long non-coding RNAs and 5'' leaders of coding RNAs. Development 2013; 140: 2828-34.
    • (2013) Development , vol.140 , pp. 2828-2834
    • Chew, G.L.1    Pauli, A.2    Rinn, J.L.3
  • 166
    • 84901437738 scopus 로고    scopus 로고
    • The dharma of nonsense-mediated mRNA decay in Mammalian cells
    • Popp, MW and Maquat, LE. The dharma of nonsense-mediated mRNA decay in Mammalian cells. Mol Cells 2014; 37: 1-8.
    • (2014) Mol Cells , vol.37 , pp. 1-8
    • Popp, M.W.1    Maquat, L.E.2
  • 167
    • 84881477715 scopus 로고    scopus 로고
    • Translation-dependent displacement of UPF1 from coding sequences causes its enrichment in 3' UTRs
    • Zund, D, Gruber, AR and Zavolan, M et al. Translation-dependent displacement of UPF1 from coding sequences causes its enrichment in 3' UTRs. Nat Struct Mol Biol 2013; 20: 936-43.
    • (2013) Nat Struct Mol Biol , vol.20 , pp. 936-943
    • Zund, D.1    Gruber, A.R.2    Zavolan, M.3
  • 168
    • 84892529760 scopus 로고    scopus 로고
    • Regulation of the apolipoprotein gene cluster by a long noncoding RNA
    • Halley, P, Kadakkuzha, BM and Faghihi, MA et al. Regulation of the apolipoprotein gene cluster by a long noncoding RNA. Cell Rep 2014; 6: 222-30.
    • (2014) Cell Rep , vol.6 , pp. 222-230
    • Halley, P.1    Kadakkuzha, B.M.2    Faghihi, M.A.3
  • 169
    • 84879642373 scopus 로고    scopus 로고
    • The Xist lncRNA exploits three-dimensional genome architecture to spread across the X chromosome
    • Engreitz, JM, Pandya-Jones, A and McDonel, P et al. The Xist lncRNA exploits three-dimensional genome architecture to spread across the X chromosome. Science 2013; 341: 1237973.
    • (2013) Science , vol.341
    • Engreitz, J.M.1    Pandya-Jones, A.2    McDonel, P.3
  • 170
    • 58049208232 scopus 로고    scopus 로고
    • Enhancing nuclear receptor-induced transcription requires nuclear motor and LSD1-dependent gene networking in interchromatin granules
    • Hu, Q, Kwon, YS and Nunez, E et al. Enhancing nuclear receptor-induced transcription requires nuclear motor and LSD1-dependent gene networking in interchromatin granules. Proc Natl Acad Sci USA 2008; 105: 19199-204.
    • (2008) Proc Natl Acad Sci USA , vol.105 , pp. 19199-19204
    • Hu, Q.1    Kwon, Y.S.2    Nunez, E.3
  • 171
    • 71849119231 scopus 로고    scopus 로고
    • Nuclear organization in the 3D space of the nucleus-cause or consequence?
    • Nunez, E, Fu, XD and Rosenfeld, MG. Nuclear organization in the 3D space of the nucleus-cause or consequence? Curr Opin Genet Dev 2009; 19: 424-36.
    • (2009) Curr Opin Genet Dev , vol.19 , pp. 424-436
    • Nunez, E.1    Fu, X.D.2    Rosenfeld, M.G.3
  • 172
    • 84865739425 scopus 로고    scopus 로고
    • Architecture of the human regulatory network derived from ENCODE data
    • Gerstein, MB, Kundaje, A and Hariharan, M et al. Architecture of the human regulatory network derived from ENCODE data. Nature 2012; 489: 91-100.
    • (2012) Nature , vol.489 , pp. 91-100
    • Gerstein, M.B.1    Kundaje, A.2    Hariharan, M.3
  • 173
    • 84860742355 scopus 로고    scopus 로고
    • NONCODE v3.0: integrative annotation of long noncoding RNAs
    • Bu, D, Yu, K and Sun, S et al. NONCODE v3.0: integrative annotation of long noncoding RNAs. Nucleic Acids Res 2012; 40: D210-15.
    • (2012) Nucleic Acids Res , vol.40 , pp. D210-D215
    • Bu, D.1    Yu, K.2    Sun, S.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.