Coupled binding-bending-folding: The complex conformational dynamics of protein-DNA binding studied by atomistic molecular dynamics simulations

Biochimica et Biophysica Acta - General Subjects

Volumn 1850, Issue 5, 2015, Pages 1091-1098

  Van Der Vaart, Arjan ^a  

^a UNIVERSITY OF SOUTH FLORIDA   (United States)

Author keywords

DNA bending; Molecular dynamics; Protein folding; Protein DNA; Simulation

Indexed keywords

BINDING PROTEIN; DNA; DNA BINDING PROTEIN; PROTEIN BINDING;

DNA BINDING; DNA CONFORMATION; DNA METHYLATION; DNA STRAND; DNA STRUCTURE; MOLECULAR DYNAMICS; PRIORITY JOURNAL; PROTEIN CONFORMATION; PROTEIN DNA BINDING; PROTEIN FOLDING; REVIEW; BINDING SITE; CHEMISTRY; CONFORMATION; KINETICS; METABOLISM; STRUCTURE ACTIVITY RELATION; THERMODYNAMICS;

BINDING SITES; DNA; DNA-BINDING PROTEINS; KINETICS; MOLECULAR DYNAMICS SIMULATION; NUCLEIC ACID CONFORMATION; PROTEIN BINDING; PROTEIN CONFORMATION; PROTEIN FOLDING; STRUCTURE-ACTIVITY RELATIONSHIP; THERMODYNAMICS;

EID: 84923182763     PISSN: 03044165     EISSN: 18728006     Source Type: Journal    
DOI: 10.1016/j.bbagen.2014.08.009     Document Type: Review

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