-
1
-
-
0019879016
-
-
Langridge, R.; Ferrin, T. E.; Kuntz, I. D.; Connolly, M. L. Science 1981, 211, 661.
-
(1981)
Science
, vol.211
, pp. 661
-
-
Langridge, R.1
Ferrin, T.E.2
Kuntz, I.D.3
Connolly, M.L.4
-
2
-
-
0000577528
-
-
Huang, C. C.; Couch, G. S.; Pettersen, E. F.; Ferrin, T. E. Pac Symp Biocomput 1996, 1, 724.
-
(1996)
Pac Symp Biocomput
, vol.1
, pp. 724
-
-
Huang, C.C.1
Couch, G.S.2
Pettersen, E.F.3
Ferrin, T.E.4
-
3
-
-
0023977089
-
-
Ferrin, T. E.; Huang, C. C.; Jarvis, L. E.; Langridge, R. J Mol Graph 1988, 6, 13.
-
(1988)
J Mol Graph
, vol.6
, pp. 13
-
-
Ferrin, T.E.1
Huang, C.C.2
Jarvis, L.E.3
Langridge, R.4
-
4
-
-
0033954256
-
-
Berman, H. M.; Westbrook, J.; Feng, Z.; Gilliland, G.; Bhat, T. N.; Weissig, H.; Shindyalov, I. N.; Bourne, P. E. Nucleic Acids Res 2000, 28, 235.
-
(2000)
Nucleic Acids Res
, vol.28
, pp. 235
-
-
Berman, H.M.1
Westbrook, J.2
Feng, Z.3
Gilliland, G.4
Bhat, T.N.5
Weissig, H.6
Shindyalov, I.N.7
Bourne, P.E.8
-
5
-
-
0029080808
-
-
Couch, G. S.; Pettersen, E. F.; Huang, C. C.; Ferrin, T. E. J Mol Graph 1995, 13, 153, 193.
-
(1995)
J Mol Graph
, vol.13
, pp. 153
-
-
Couch, G.S.1
Pettersen, E.F.2
Huang, C.C.3
Ferrin, T.E.4
-
7
-
-
0026333329
-
-
Huang, C. C.; Pettersen, E. F.; Klein, T. E.; Ferrin, T. E.; Langridge, R. J Mol Graph 1991, 9, 230, 242.
-
(1991)
J Mol Graph
, vol.9
, pp. 230
-
-
Huang, C.C.1
Pettersen, E.F.2
Klein, T.E.3
Ferrin, T.E.4
Langridge, R.5
-
9
-
-
84862419712
-
-
Python; http://www.python.org/.
-
-
-
-
11
-
-
84862407531
-
-
Tkinter; http://www.python.org/topics/tkinter/.
-
Tkinter
-
-
-
14
-
-
0030040323
-
-
Sanner, M. F.; Olson, A. J.; Spehner, J. C. Biopolymers 1996, 38, 305.
-
(1996)
Biopolymers
, vol.38
, pp. 305
-
-
Sanner, M.F.1
Olson, A.J.2
Spehner, J.C.3
-
15
-
-
84862419487
-
-
OpenGL; http://www.opengl.org/.
-
-
-
-
16
-
-
0032189765
-
-
Grimes, J. M.; Burroughs, J. N.; Gouet, P.; Diprose, J. M.; Malby, R.; Zientara, S.; Mertens, P. P.; Stuart, D. I. Nature 1998, 395, 470.
-
(1998)
Nature
, vol.395
, pp. 470
-
-
Grimes, J.M.1
Burroughs, J.N.2
Gouet, P.3
Diprose, J.M.4
Malby, R.5
Zientara, S.6
Mertens, P.P.7
Stuart, D.I.8
-
17
-
-
0036721377
-
-
Diprose, J. M.; Grimes, J. M.; Sutton, G. C.; Burroughs, J. N.; Meyer, A.; Maan, S.; Mertens, P. P.; Stuart, D. I. J Virol 2002, 76, 9533.
-
(2002)
J Virol
, vol.76
, pp. 9533
-
-
Diprose, J.M.1
Grimes, J.M.2
Sutton, G.C.3
Burroughs, J.N.4
Meyer, A.5
Maan, S.6
Mertens, P.P.7
Stuart, D.I.8
-
18
-
-
0042121237
-
-
Chenna, R.; Sugawara, H.; Koike, T.; Lopez, R.; Gibson, T. J.; Higgins, D. G.; Thompson, J. D. Nucleic Acids Res 2003, 31, 3497.
-
(2003)
Nucleic Acids Res
, vol.31
, pp. 3497
-
-
Chenna, R.1
Sugawara, H.2
Koike, T.3
Lopez, R.4
Gibson, T.J.5
Higgins, D.G.6
Thompson, J.D.7
-
19
-
-
0036084625
-
-
Lo Conte, L.; Brenner, S. E.; Hubbard, T. J.; Chothia, C.; Murzin, A. G. Nucleic Acids Res 2002, 30, 264.
-
(2002)
Nucleic Acids Res
, vol.30
, pp. 264
-
-
Lo Conte, L.1
Brenner, S.E.2
Hubbard, T.J.3
Chothia, C.4
Murzin, A.G.5
-
20
-
-
0028961335
-
-
Murzin, A. G.; Brenner, S. E.; Hubbard, T.; Chothia, C. J Mol Biol 1995, 247, 536.
-
(1995)
J Mol Biol
, vol.247
, pp. 536
-
-
Murzin, A.G.1
Brenner, S.E.2
Hubbard, T.3
Chothia, C.4
-
21
-
-
0001290045
-
-
Sigrist, C. J.; Cerutti, L.; Hulo, N.; Gattiker, A.; Falquet, L.; Pagni, M.; Bairoch, A.; Bucher, P. Brief Bioinform 2002, 3, 265.
-
(2002)
Brief Bioinform
, vol.3
, pp. 265
-
-
Sigrist, C.J.1
Cerutti, L.2
Hulo, N.3
Gattiker, A.4
Falquet, L.5
Pagni, M.6
Bairoch, A.7
Bucher, P.8
-
22
-
-
0037246692
-
-
Chiang, R. A.; Meng, E. C.; Huang, C. C.; Ferrin, T. E.; Babbitt, P. C. Nucleic Acids Res 2003, 31, 505.
-
(2003)
Nucleic Acids Res
, vol.31
, pp. 505
-
-
Chiang, R.A.1
Meng, E.C.2
Huang, C.C.3
Ferrin, T.E.4
Babbitt, P.C.5
-
23
-
-
0035025191
-
-
Ewing, T. J.; Makino, S.; Skillman, A. G.; Kuntz, I. D. J Comput Aided Mol Des 2001, 15, 411.
-
(2001)
J Comput Aided Mol des
, vol.15
, pp. 411
-
-
Ewing, T.J.1
Makino, S.2
Skillman, A.G.3
Kuntz, I.D.4
-
24
-
-
0026730489
-
-
Kuntz, I. D. Science 1992, 257, 1078.
-
(1992)
Science
, vol.257
, pp. 1078
-
-
Kuntz, I.D.1
-
26
-
-
84862415392
-
-
AMBER
-
Case, D. A.; Pearlman, D. A.; Caldwell, J. W.; Cheatham, T. E. I.; Wang, J.; Ross, W. S.; Simmerling, C.; Darden, T.; Merz, K. M.; Stanton, R. V.; Cheng, A.; Vincent, J. J.; Crowley, M.; Tsui, V.; Gohlke, H.; Radmer, R.; Duan, Y.; Pitera, J.; Massova, I.; Seibel, G. L.; Singh, U. C.; Weiner, P.; Kollman, P. A. AMBER; http://amber.scripps.edu/.
-
-
-
Case, D.A.1
Pearlman, D.A.2
Caldwell, J.W.3
Cheatham, T.E.I.4
Wang, J.5
Ross, W.S.6
Simmerling, C.7
Darden, T.8
Merz, K.M.9
Stanton, R.V.10
Cheng, A.11
Vincent, J.J.12
Crowley, M.13
Tsui, V.14
Gohlke, H.15
Radmer, R.16
Duan, Y.17
Pitera, J.18
Massova, I.19
Seibel, G.L.20
Singh, U.C.21
Weiner, P.22
Kollman, P.A.23
more..
-
28
-
-
0042415783
-
-
Kale, L.; Skeel, R.; Bhandarkar, M.; Brunner, R.; Gursoy, A.; Krawetz, N.; Phillips, J.; Shinozaki, A.; Varadarajan, K.; Schulten, K. J Comput Phys 1999, 151, 283.
-
(1999)
J Comput Phys
, vol.151
, pp. 283
-
-
Kale, L.1
Skeel, R.2
Bhandarkar, M.3
Brunner, R.4
Gursoy, A.5
Krawetz, N.6
Phillips, J.7
Shinozaki, A.8
Varadarajan, K.9
Schulten, K.10
-
31
-
-
3543012707
-
-
Brunger, A. T.; Adams, P. D.; Clore, G. M.; DeLano, W. L.; Gros, P.; Grosse-Kunstleve, R. W.; Jiang, J. S.; Kuszewski, J.; Nilges, M.; Pannu, N. S.; Read, R. J.; Rice, L. M.; Simonson, T.; Warren, G. L. Acta Crystallogr D 1998, 54, 905.
-
(1998)
Acta Crystallogr D
, vol.54
, pp. 905
-
-
Brunger, A.T.1
Adams, P.D.2
Clore, G.M.3
Delano, W.L.4
Gros, P.5
Grosse-Kunstleve, R.W.6
Jiang, J.S.7
Kuszewski, J.8
Nilges, M.9
Pannu, N.S.10
Read, R.J.11
Rice, L.M.12
Simonson, T.13
Warren, G.L.14
-
32
-
-
0033120221
-
-
Badger, J.; Kumar, R. A.; Yip, P.; Szalma, S. Proteins 1999, 35, 25.
-
(1999)
Proteins
, vol.35
, pp. 25
-
-
Badger, J.1
Kumar, R.A.2
Yip, P.3
Szalma, S.4
-
33
-
-
0029975088
-
-
Frank, J.; Radermacher, M.; Penczek, P.; Zhu, J.; Li, Y.; Ladjadj, M.; Leith, A. J Struct Biol 1996, 116, 190.
-
(1996)
J Struct Biol
, vol.116
, pp. 190
-
-
Frank, J.1
Radermacher, M.2
Penczek, P.3
Zhu, J.4
Li, Y.5
Ladjadj, M.6
Leith, A.7
-
35
-
-
0026319199
-
-
Nicholls, A.; Sharp, K. A.; Honig, B. Proteins 1991, 11, 281.
-
(1991)
Proteins
, vol.11
, pp. 281
-
-
Nicholls, A.1
Sharp, K.A.2
Honig, B.3
-
36
-
-
0029931004
-
-
Chen, H.; Hughes, D. D.; Chan, T. A.; Sedat, J. W.; Agard, D. A. J Struct Biol 1996, 116, 56.
-
(1996)
J Struct Biol
, vol.116
, pp. 56
-
-
Chen, H.1
Hughes, D.D.2
Chan, T.A.3
Sedat, J.W.4
Agard, D.A.5
-
38
-
-
84862411070
-
-
Unidata Program Center, Boulder, CO
-
Network Common Data Form; Unidata Program Center, Boulder, CO; http://www.unidata.ucar.edu/packages/netcdf/.
-
-
-
Form, N.C.D.1
-
40
-
-
0007968045
-
-
Richardson, T.; Stafford-Fraser, Q.; Wood, K. R.; Hopper, A. IEEE Internet Comput 1998, 2, 33.
-
(1998)
IEEE Internet Comput
, vol.2
, pp. 33
-
-
Richardson, T.1
Stafford-Fraser, Q.2
Wood, K.R.3
Hopper, A.4
-
42
-
-
0035229921
-
-
Banatao, D. R.; Huang, C. C.; Babbitt, P. C.; Altman, R. B.; Klein, T. E. Pac Symp Biocomput 2001, 6, 240.
-
(2001)
Pac Symp Biocomput
, vol.6
, pp. 240
-
-
Banatao, D.R.1
Huang, C.C.2
Babbitt, P.C.3
Altman, R.B.4
Klein, T.E.5
-
44
-
-
9144244232
-
-
Pieper, U.; Eswar, N.; Braberg, H.; Madhusudhan, M. S.; Davis, F. P.; Stuart, A. C.; Mirkovic, N.; Rossi, A.; Marti-Renom, M. A.; Fiser, A.; Webb, B.; Greenblatt, D.; Huang, C. C.; Ferrin, T. E.; Sali, A. Nucleic Acids Res 2004, 32, D217.
-
(2004)
Nucleic Acids Res
, vol.32
-
-
Pieper, U.1
Eswar, N.2
Braberg, H.3
Madhusudhan, M.S.4
Davis, F.P.5
Stuart, A.C.6
Mirkovic, N.7
Rossi, A.8
Marti-Renom, M.A.9
Fiser, A.10
Webb, B.11
Greenblatt, D.12
Huang, C.C.13
Ferrin, T.E.14
Sali, A.15
-
45
-
-
0036616870
-
-
Thomas, L. M.; Doan, C. N.; Oliver, R. L.; Yoder, M. D. Acta Crystallogr D 2002, 58, 1008.
-
(2002)
Acta Crystallogr D
, vol.58
, pp. 1008
-
-
Thomas, L.M.1
Doan, C.N.2
Oliver, R.L.3
Yoder, M.D.4
-
46
-
-
0028518996
-
-
Pickersgill, R.; Jenkins, J.; Harris, G.; Nasser, W.; Robert-Baudouy, J. Nat Struct Biol 1994, 1, 717.
-
(1994)
Nat Struct Biol
, vol.1
, pp. 717
-
-
Pickersgill, R.1
Jenkins, J.2
Harris, G.3
Nasser, W.4
Robert-Baudouy, J.5
-
48
-
-
0025941877
-
-
Wittinghofer, F.; Krengel, U.; John, J.; Kabsch, W.; Pai, E. F. Environ Health Perspect 1991, 93, 11.
-
(1991)
Environ Health Perspect
, vol.93
, pp. 11
-
-
Wittinghofer, F.1
Krengel, U.2
John, J.3
Kabsch, W.4
Pai, E.F.5
-
49
-
-
0034814786
-
-
Zhou, Z. H.; Baker, M. L.; Jiang, W.; Dougherty, M.; Jakana, J.; Dong, G.; Lu, G.; Chiu, W. Nat Struct Biol 2001, 8, 868.
-
(2001)
Nat Struct Biol
, vol.8
, pp. 868
-
-
Zhou, Z.H.1
Baker, M.L.2
Jiang, W.3
Dougherty, M.4
Jakana, J.5
Dong, G.6
Lu, G.7
Chiu, W.8
-
50
-
-
0035906702
-
-
Jiang, W.; Baker, M. L.; Ludtke, S. J.; Chiu, W. J Mol Biol 2001, 308, 1033.
-
(2001)
J Mol Biol
, vol.308
, pp. 1033
-
-
Jiang, W.1
Baker, M.L.2
Ludtke, S.J.3
Chiu, W.4
-
51
-
-
0028874050
-
-
Grimes, J.; Basak, A. K.; Roy, P.; Stuart, D. Nature 1995, 373, 167.
-
(1995)
Nature
, vol.373
, pp. 167
-
-
Grimes, J.1
Basak, A.K.2
Roy, P.3
Stuart, D.4
|