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Volumn 90, Issue 9, 2006, Pages 3208-3215

The contribution of transient counterion imbalances to DNA bending fluctuations

Author keywords

[No Author keywords available]

Indexed keywords

CURVED DNA; DNA; ION; SODIUM CHLORIDE;

EID: 33646158918     PISSN: 00063495     EISSN: None     Source Type: Journal    
DOI: 10.1529/biophysj.105.078865     Document Type: Article
Times cited : (28)

References (18)
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    • Elcock, A. H., and J. A. McCammon. 1996. The low dielectric interior of proteins is sufficient to cause major structural changes in DNA on association. J. Am. Chem. Soc. 118:3787-3788.
    • (1996) J. Am. Chem. Soc. , vol.118 , pp. 3787-3788
    • Elcock, A.H.1    McCammon, J.A.2
  • 4
    • 0028597967 scopus 로고
    • DNA bending by asymmetric phosphate neutralization
    • Strauss, J. K., and L. J. Maher. 1994. DNA bending by asymmetric phosphate neutralization. Science. 266:1829-1834.
    • (1994) Science , vol.266 , pp. 1829-1834
    • Strauss, J.K.1    Maher, L.J.2
  • 5
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    • Mechanisms of DNA bending
    • Maher, L. J. 1998. Mechanisms of DNA bending. Curr. Opin. Chem. Biol. 2:688-694.
    • (1998) Curr. Opin. Chem. Biol. , vol.2 , pp. 688-694
    • Maher, L.J.1
  • 8
    • 0036569686 scopus 로고    scopus 로고
    • Bending of DNA by asymmetric charge neutralization: All-atom energy simulations
    • Kosikov, K. M., A. A. Gorin, X. J. Lu, W. K. Olson, and G. S. Manning. 2002. Bending of DNA by asymmetric charge neutralization: all-atom energy simulations. J. Am. Chem. Soc. 124:4838-4847.
    • (2002) J. Am. Chem. Soc. , vol.124 , pp. 4838-4847
    • Kosikov, K.M.1    Gorin, A.A.2    Lu, X.J.3    Olson, W.K.4    Manning, G.S.5
  • 10
    • 4043179941 scopus 로고    scopus 로고
    • DNA and its counterions: A molecular dynamics study
    • Várnai, P., and K. Zakrzewska. 2004. DNA and its counterions: a molecular dynamics study. Nucleic Acids Res. 32:4269-4280.
    • (2004) Nucleic Acids Res. , vol.32 , pp. 4269-4280
    • Várnai, P.1    Zakrzewska, K.2
  • 11
    • 0024519056 scopus 로고
    • An estimate of the extent of folding of nucleosomal DNA by laterally asymmetric neutralization of phosphate groups
    • Manning, G. S., K. K. Ebralidse, A. D. Mirzabekov, and A. Rich. 1989. An estimate of the extent of folding of nucleosomal DNA by laterally asymmetric neutralization of phosphate groups. J. Biomol. Struct. Dyn. 6:877-889.
    • (1989) J. Biomol. Struct. Dyn. , vol.6 , pp. 877-889
    • Manning, G.S.1    Ebralidse, K.K.2    Mirzabekov, A.D.3    Rich, A.4
  • 12
    • 0028917358 scopus 로고
    • The theory of DNA bending
    • Manning, G. S. 1995. The theory of DNA bending. Science. 268:188.
    • (1995) Science , vol.268 , pp. 188
    • Manning, G.S.1
  • 13
    • 0037058905 scopus 로고    scopus 로고
    • The molecular theory of polyelectrolyte solutions with applications to the electrostatic properties of polynucleotides
    • Manning, G. S. 2002. The molecular theory of polyelectrolyte solutions with applications to the electrostatic properties of polynucleotides. Biophys. Chem. 101-102:461-473.
    • (2002) Biophys. Chem. , vol.101-102 , pp. 461-473
    • Manning, G.S.1
  • 14
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    • Electrostatic free energy of the DNA double helix in counterion condensation theory
    • Manning, G. S. 1978. Electrostatic free energy of the DNA double helix in counterion condensation theory. Quart. Rev. Biophys. 11:179-246.
    • (1978) Quart. Rev. Biophys. , vol.11 , pp. 179-246
    • Manning, G.S.1
  • 15
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    • Intrusion of counterions into the spine of hydration in the minor groove of B-DNA: Fractional occupancy of electronegative pockets
    • Young, M. A., B. Jayaram, and D. L. Beveridge. 1997. Intrusion of counterions into the spine of hydration in the minor groove of B-DNA: fractional occupancy of electronegative pockets. J. Am. Chem. Soc. 119:59-69.
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* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.