Ionic effects on the elasticity of single DNA molecules

Proceedings of the National Academy of Sciences of the United States of America

Volumn 94, Issue 12, 1997, Pages 6185-6190

  Baumann, Christoph G ^a   Smith, Steven B ^b   Bloomfield, Victor A ^a   Bustamante, Carlos ^b  

^a UNIVERSITY OF MINNESOTA   (United States)

^b UNIVERSITY OF OREGON   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIOPHAGE DNA; COBALT; ION; MAGNESIUM ION; MONOVALENT CATION; POLYAMINE; POLYELECTROLYTE; PUTRESCINE; SPERMIDINE;

ARTICLE; DNA STRUCTURE; ELASTICITY; ENTHALPY; ENTROPY; FORCE; IONIC STRENGTH; LASER; MOLECULAR DYNAMICS; POLYMERIZATION; PRIORITY JOURNAL;

COBALT; DNA; ELASTICITY; ELECTROSTATICS; ENTROPY; IONS; MAGNESIUM; MODELS, CHEMICAL; OSMOLAR CONCENTRATION; PUTRESCINE; QUATERNARY AMMONIUM COMPOUNDS; SPERMIDINE; THERMODYNAMICS;

EID: 0030947539     PISSN: 00278424     EISSN: None     Source Type: Journal    
DOI: 10.1073/pnas.94.12.6185     Document Type: Article

References (44)

1. Manning, G. S. (1978) Q. Rev. Biophys. 11, 179-246.
2. Record, M. T., Jr., Anderson, C. F. & Lohman, T. M. (1978) Q. Rev. Biophys. 11, 103-178.
3. Smith, S. B., Finzi, L. & Bustamante, C. (1992) Science 258, 1122-1126.
4. Strick, T. R., Allemand, J.-F., Bensimon, D., Bensimon, A. & Croquette, V. (1996) Science 271, 1835-1837.
5. Cluzel, P., Lebrun, A., Heller, C., Lavery, R., Viovy, J.-L., Chatenay, D. & Caron, F. (1996) Science 271, 792-794.
6. Smith, S. B., Cui, Y. & Bustamante, C. (1996) Science 271 795-799.
7. Perkins, T. T., Smith, D. E., Larson, R. G. & Chu, S. (1995) Science 268, 83-87.
8. Bustamante, C., Marko, J. F., Siggia, E. D. & Smith, S. (1994) Science 265, 1599-1600.
9. Marko, J. F. & Siggia, E. D. (1995) Macromolecules 28, 8759-8770.
10. Odijk, T. (1995) Macromolecules 28, 7016-7018.
11. Wang, M. D., Yin, H., Landick, R., Gelles, J. & Block, S. M. (1997) Biophys. J. 72, 1335-1346.
12. Odijk, T. (1977) J. Polym. Sci. Polym. Phys. Ed. 15, 477-483.
13. Skolnick, J. & Fixman, M. (1977) Macromolecules 10, 944-948.
14. Manning, G. S. (1980) Biopolymers 19, 37-59.
15. Grosberg, A. Y. & Khokhlov, A. R. (1994) Statistical Physics of Macromolecules (Am. Inst. Phys. Press, New York), pp. 3, 5, 217-220.
16. Kovac, J. & Crabb, C. C. (1982) Macromolecules 15, 537-541.
17. Bloomfield, V. A. (1996) Curr. Opin. Struct. Biol. 6, 334-341
18. Dickerson, R. E., Drew, H. R., Conner, B. N., Wing, R. M., Fratini, A. V. & Kopka, M. L. (1982) Science 216, 475-485.
19. Saenger, W. (1984) Principles of Nucleic Acid Structure (Springer, New York).
20. Wilson, R. W. & Bloomfield, V. A. (1979) Biochemistry 18, 2192-2196.
21. Widom, J. & Baldwin, R. L. (1980) J. Mol. Biol. 144, 431-453.
22. Sobel, E. S. & Harpst, J. A. (1991) Biopolymers 31, 1559-1564.
23. Cairney, K. L. & Harrington, R. E. (1982) Biopolymers 21, 923-934.
24. Porschke, D. (1991) Biophys. Chem. 40, 169-179.
25. Hagerman, P. J. (1988) Annu. Rev. Biophys. Biophys. Chem. 17, 265-286.
26. Porschke, D. (1986) J. Biomolec. Struct. Dyn. 4, 373-389.
27. Baase, W. A., Staskus, P. W. & Allison, S. A. (1984) Biopolymers 23, 2835-2851.
28. Schellman, J. A. & Harvey, S. C. (1995) Biophys. Chem. 55, 95-114.
29. Rose, D. M., Polnaszek, C. F. & Bryant, R. G. (1982) Biopolymers 21, 653-664.
30. Berggren, E., Nordenskiöld, L. & Braunlin, W. H. (1992) Biopolymers 32, 1339-1350.
31. Wemmer, D. E., Srivenugopal, K. S., Reid, B. R. & Morris, D. R. (1985) J. Mol. Biol. 185, 457-459.
32. Rau, D. C. & Parsegian, V. A. (1992) Biophys. J. 61, 246-259.
33. Reich, Z., Ghirlando, R. & Minsky, A. (1991) Biochemistry 30, 7828-7836.
34. Oosawa, F. (1971) Polyelectrolytes (Dekker, New York).
35. Rouzina, I. & Bloomfield, V. A. (1996) J. Phys. Chem. 100, 9977-9989.
36. Landau, L. D. & Lifshitz, E. M. (1986) Theory of Elasticity (Pergamon, Oxford).
37. Landau, L. D. & Lifshitz, E. M. (1970) Statistical Physics (Pergamon, Oxford).
38. Fujimoto, B. S., Miller, J. M., Ribeiro, N. S. & Schurr, J. M. (1994) Biophys. J. 67, 304-308.
39. Manning, G. S. (1985) Cell. Biophys. 7, 57-89.
40. Crothers, D. M., Drak, J., Kahn, J. D. & Levene, S. D. (1992) Methods Enzymol. 212, 3-29.
41. Dove, W. F. & Davidson, N. (1962) J. Mol. Biol. 5, 467-478.
42. Eichhorn, G. L. & Shin, Y. A. (1968) J. Am. Chem. Soc. 90, 7323-7328.
43. Thomas, T. J. & Bloomfield, V. A. (1984) Biopolymers 23, 1295-1306.
44. Thomas, T. J., Kulkarni, G. D., Greenfield, N. J., Shirahata, A. & Thomas, T. (1996) Biochem. J. 319, 591-599.