-
1
-
-
0026344818
-
Estimation of macromolecule concentrations and excluded volume effects for the cytoplasm of escherichia coli
-
Zimmerman, S. B.; Trach, S. O. Estimation of macromolecule concentrations and excluded volume effects for the cytoplasm of escherichia coli. J. Mol. Biol. 1991, 222, 599-620.
-
(1991)
J. Mol. Biol
, vol.222
, pp. 599-620
-
-
Zimmerman, S.B.1
Trach, S.O.2
-
2
-
-
0033572725
-
Effects of macromolecular crowding on protein folding and aggregation
-
Van den Berg, B.; Ellis, R. J.; Dobson, C. M. Effects of macromolecular crowding on protein folding and aggregation. EMBO J. 1999, 18, 6927-6933.
-
(1999)
EMBO J
, vol.18
, pp. 6927-6933
-
-
Van den Berg, B.1
Ellis, R.J.2
Dobson, C.M.3
-
3
-
-
1242321063
-
Life in a crowded world
-
Rivas, G.; Ferrone, F.; Herzfeld, J. Life in a crowded world. EMBO Rep. 2004, 5, 23-27.
-
(2004)
EMBO Rep
, vol.5
, pp. 23-27
-
-
Rivas, G.1
Ferrone, F.2
Herzfeld, J.3
-
4
-
-
0041822089
-
Cell biology: Join the crowd
-
Ellis, R. J.; Minton, A. P. Cell biology: Join the crowd. Nature 2003, 425, 27-28.
-
(2003)
Nature
, vol.425
, pp. 27-28
-
-
Ellis, R.J.1
Minton, A.P.2
-
5
-
-
0027318513
-
Macromolecular crowding: Biochemical, biophysical, and physiological consequences
-
Zimmerman, S. B.; Minton, A. P. Macromolecular crowding: Biochemical, biophysical, and physiological consequences. Annu. Rev. Biophys. Biomol. Struct. 1993, 22, 27-65.
-
(1993)
Annu. Rev. Biophys. Biomol. Struct
, vol.22
, pp. 27-65
-
-
Zimmerman, S.B.1
Minton, A.P.2
-
6
-
-
0020184671
-
How crowded is the cytoplasm?
-
Fulton, A. B. How crowded is the cytoplasm? Cell 1982, 30, 345-347.
-
(1982)
Cell
, vol.30
, pp. 345-347
-
-
Fulton, A.B.1
-
7
-
-
0031022118
-
Influence of excluded volume upon macromolecular structure and associations in "crowded" media
-
Minton, A. P. Influence of excluded volume upon macromolecular structure and associations in "crowded" media. Curr. Opin. Biotechnol. 1997, 8, 65-69.
-
(1997)
Curr. Opin. Biotechnol
, vol.8
, pp. 65-69
-
-
Minton, A.P.1
-
8
-
-
0035478585
-
Macromolecular crowding: Obvious but underappreciated
-
Ellis, R. J. Macromolecular crowding: Obvious but underappreciated. Trends Biochem. Sci. 2001, 26, 597-604.
-
(2001)
Trends Biochem. Sci
, vol.26
, pp. 597-604
-
-
Ellis, R.J.1
-
9
-
-
0034628613
-
Protein folding: Thickening the broth
-
Minton, A. P. Protein folding: Thickening the broth. Curr. Biol. 2000, 10, R97-R99.
-
(2000)
Curr. Biol
, vol.10
, pp. R97-R99
-
-
Minton, A.P.1
-
10
-
-
0003422388
-
-
4th ed.; W.H. Freeman: New York, NY, USA
-
Lodish, H.; Berk, A.; Zipursky, S. L.; Matsudaira, P.; Baltimore, D.; Darnell, J. Molecular Cell Biology, 4th ed.; W. H. Freeman: New York, NY, USA, 2000.
-
(2000)
Molecular Cell Biology
-
-
Lodish, H.1
Berk, A.2
Zipursky, S.L.3
Matsudaira, P.4
Baltimore, D.5
Darnell, J.6
-
11
-
-
0033969150
-
Implications of macromolecular crowding for protein assembly
-
Minton, A. P. Implications of macromolecular crowding for protein assembly. Curr. Opin. Struct. Biol. 2000, 10, 34-39.
-
(2000)
Curr. Opin. Struct. Biol
, vol.10
, pp. 34-39
-
-
Minton, A.P.1
-
12
-
-
50149092143
-
Crowded, cell-like environment induces shape changes in aspherical protein
-
Homouz, D.; Perham, M.; Samiotakis, A.; Cheung, M. S.; Wittung-Stafshede, P. Crowded, cell-like environment induces shape changes in aspherical protein. Proc. Natl. Acad. Sci. USA 2008, 105, 11754-11759.
-
(2008)
Proc. Natl. Acad. Sci. USA
, vol.105
, pp. 11754-11759
-
-
Homouz, D.1
Perham, M.2
Samiotakis, A.3
Cheung, M.S.4
Wittung-Stafshede, P.5
-
13
-
-
16344364032
-
Models for excluded volume interaction between an unfolded protein and rigid macromolecular cosolutes: Macromolecular crowding and protein stability revisited
-
Minton, A. P. Models for excluded volume interaction between an unfolded protein and rigid macromolecular cosolutes: Macromolecular crowding and protein stability revisited. Biophys. J. 2005, 88, 971-985.
-
(2005)
Biophys. J
, vol.88
, pp. 971-985
-
-
Minton, A.P.1
-
14
-
-
0035815743
-
The influence of macromolecular crowding and macromolecular confinement on biochemical reactions in physiological media
-
Minton, A. P. The influence of macromolecular crowding and macromolecular confinement on biochemical reactions in physiological media. J. Biol. Chem. 2001, 276, 10577-10580.
-
(2001)
J. Biol. Chem
, vol.276
, pp. 10577-10580
-
-
Minton, A.P.1
-
15
-
-
0001123138
-
Effects of "crowding" in protein solutions
-
Ralston, G. B. Effects of "crowding" in protein solutions. J. Chem. Edu. 2005, 67, 857-860.
-
(2005)
J. Chem. Edu
, vol.67
, pp. 857-860
-
-
Ralston, G.B.1
-
16
-
-
0035824871
-
Crowding and hydration effects on protein conformation: A study with sol-gel encapsulated proteins
-
Eggers, D. K.; Valentine, J. S. Crowding and hydration effects on protein conformation: A study with sol-gel encapsulated proteins. J. Mol. Biol. 2001, 314, 911-922.
-
(2001)
J. Mol. Biol
, vol.314
, pp. 911-922
-
-
Eggers, D.K.1
Valentine, J.S.2
-
17
-
-
0035092041
-
Molecular confinement influences protein structure and enhances thermal protein stability
-
Eggers, D. K.; Valentine, J. S. Molecular confinement influences protein structure and enhances thermal protein stability. Protein Sci. 2001, 10, 250-261.
-
(2001)
Protein Sci
, vol.10
, pp. 250-261
-
-
Eggers, D.K.1
Valentine, J.S.2
-
18
-
-
0036292540
-
Effect of molecular confinement on internal enzyme dynamics: Frequency domain fluorometry and molecular dynamics simulation studies
-
Bismuto, E.; Martelli, P. L.; de Maio, A.; Mita, D. G.; Irace, G.; Casadio, R. Effect of molecular confinement on internal enzyme dynamics: Frequency domain fluorometry and molecular dynamics simulation studies. Biopolymers 2002, 67, 85-95.
-
(2002)
Biopolymers
, vol.67
, pp. 85-95
-
-
Bismuto, E.1
Martelli, P.L.2
de Maio, A.3
Mita, D.G.4
Irace, G.5
Casadio, R.6
-
19
-
-
0034773940
-
Solvent-induced collapse of alpha-synuclein and acid-denatured cytochrome c
-
Morar, A. S.; Olteanu, A.; Young, G. B.; Pielak, G. J. Solvent-induced collapse of alpha-synuclein and acid-denatured cytochrome c. Protein Sci. 2001, 10, 2195-2199.
-
(2001)
Protein Sci
, vol.10
, pp. 2195-2199
-
-
Morar, A.S.1
Olteanu, A.2
Young, G.B.3
Pielak, G.J.4
-
20
-
-
0037040878
-
Macromolecular crowding accelerates amyloid formation by human apolipoprotein c-ii
-
Hatters, D. M.; Minton, A. P.; Howlett, G. J. Macromolecular crowding accelerates amyloid formation by human apolipoprotein c-ii. J. Biol. Chem. 2002, 277, 7824-7830.
-
(2002)
J. Biol. Chem
, vol.277
, pp. 7824-7830
-
-
Hatters, D.M.1
Minton, A.P.2
Howlett, G.J.3
-
21
-
-
0037181497
-
Accelerated alpha-synuclein fibrillation in crowded milieu
-
Uversky, V. N.; Cooper, E. M.; Bower, K. S.; Li, J.; Fink, A. L. Accelerated alpha-synuclein fibrillation in crowded milieu. FEBS Lett. 2002, 515, 99-103.
-
(2002)
FEBS Lett
, vol.515
, pp. 99-103
-
-
Uversky, V.N.1
Cooper, E.M.2
Bower, K.S.3
Li, J.4
Fink, A.L.5
-
22
-
-
0037177250
-
Molecular crowding accelerates fibrillization of alpha-synuclein: Could an increase in the cytoplasmic protein concentration induce parkinson's disease?
-
Shtilerman, M. D.; Ding, T. T.; Lansbury, P. T., Jr. Molecular crowding accelerates fibrillization of alpha-synuclein: Could an increase in the cytoplasmic protein concentration induce parkinson's disease? Biochemistry 2002, 41, 3855-3860.
-
(2002)
Biochemistry
, vol.41
, pp. 3855-3860
-
-
Shtilerman, M.D.1
Ding, T.T.2
Lansbury, P.T.3
-
23
-
-
79957675684
-
Applying macromolecular crowding to enhance extracellular matrix deposition and its remodeling in vitro for tissue engineering and cell-based therapies
-
Chen, C.; Loe, F.; Blocki, A.; Peng, Y.; Raghunath, M. Applying macromolecular crowding to enhance extracellular matrix deposition and its remodeling in vitro for tissue engineering and cell-based therapies. Adv. Drug Deliv. Rev. 2011, 63, 277-290.
-
(2011)
Adv. Drug Deliv. Rev
, vol.63
, pp. 277-290
-
-
Chen, C.1
Loe, F.2
Blocki, A.3
Peng, Y.4
Raghunath, M.5
-
24
-
-
0027829616
-
Macromolecular crowding and molecular recognition
-
Minton, A. P. Macromolecular crowding and molecular recognition. J. Mol. Recognit. 1993, 6, 211-214.
-
(1993)
J. Mol. Recognit
, vol.6
, pp. 211-214
-
-
Minton, A.P.1
-
25
-
-
0347994108
-
Protein folding by the effects of macromolecular crowding
-
Tokuriki, N.; Kinjo, M.; Negi, S.; Hoshino, M.; Goto, Y.; Urabe, I.; Yomo, T. Protein folding by the effects of macromolecular crowding. Protein Sci. 2004, 13, 125-133.
-
(2004)
Protein Sci
, vol.13
, pp. 125-133
-
-
Tokuriki, N.1
Kinjo, M.2
Negi, S.3
Hoshino, M.4
Goto, Y.5
Urabe, I.6
Yomo, T.7
-
26
-
-
0032964574
-
Synthesis of sol-gel encapsulated heme proteins with chemical sensing properties
-
Lan, E. H.; Dave, B. C.; Fukuto, J. M.; Dunn, B.; Zink, J. I.; Valentine, J. S. Synthesis of sol-gel encapsulated heme proteins with chemical sensing properties. J. Mater. Chem. 1999, 9, 45-53.
-
(1999)
J. Mater. Chem
, vol.9
, pp. 45-53
-
-
Lan, E.H.1
Dave, B.C.2
Fukuto, J.M.3
Dunn, B.4
Zink, J.I.5
Valentine, J.S.6
-
27
-
-
0001476595
-
Impeded rotation of a protein in sol-gel matrix
-
Gottfried, D. S.; Kagan, A.; Hoffman, B. M.; Friedman, J. M. Impeded rotation of a protein in sol-gel matrix. J. Phys. Chem. B 1999, 103, 2803-2807.
-
(1999)
J. Phys. Chem. B
, vol.103
, pp. 2803-2807
-
-
Gottfried, D.S.1
Kagan, A.2
Hoffman, B.M.3
Friedman, J.M.4
-
28
-
-
0032632382
-
Using fluorescence to investigate proteins entrapped in sol-gel derived materials
-
Brennan, J. D. Using fluorescence to investigate proteins entrapped in sol-gel derived materials Appl. Spec. 1999, 53, 106A-121A.
-
(1999)
Appl. Spec
, vol.53
, pp. 106A-121A
-
-
Brennan, J.D.1
-
29
-
-
0028536033
-
Sol-gel encapsulation methods for biosensors
-
Dave, B. C.; Dunn, B.; Valentine, J. S.; Zink, J. I. Sol-gel encapsulation methods for biosensors. Anal. Chem. 1994, 66, 1120-1127.
-
(1994)
Anal. Chem
, vol.66
, pp. 1120-1127
-
-
Dave, B.C.1
Dunn, B.2
Valentine, J.S.3
Zink, J.I.4
-
30
-
-
0034237721
-
Bioencapsulation within synthetic polymers (part 1): Sol-gel encapsulated biologicals
-
Gill, I.; Ballestros, A. Bioencapsulation within synthetic polymers (part 1): Sol-gel encapsulated biologicals. Trends Biotechnol. 2000, 18, 282-296.
-
(2000)
Trends Biotechnol
, vol.18
, pp. 282-296
-
-
Gill, I.1
Ballestros, A.2
-
31
-
-
0035861901
-
The effect of molecular confinement on the conformational dynamics of the native and partly folded state of apomyoglobin
-
Bismuto, E.; Irace, G. The effect of molecular confinement on the conformational dynamics of the native and partly folded state of apomyoglobin. FEBS Lett. 2001, 509, 476-480.
-
(2001)
FEBS Lett
, vol.509
, pp. 476-480
-
-
Bismuto, E.1
Irace, G.2
-
32
-
-
50349092134
-
Molecular dynamics studies of polyethylene oxide and polyethylene glycol: Hydrodynamic radius and shape anisotropy
-
Lee, H.; Venable, R. M.; Mackerell, A. D., Jr.; Pastor, R. W. Molecular dynamics studies of polyethylene oxide and polyethylene glycol: Hydrodynamic radius and shape anisotropy. Biophys. J. 2008, 95, 1590-1599.
-
(2008)
Biophys. J
, vol.95
, pp. 1590-1599
-
-
Lee, H.1
Venable, R.M.2
Mackerell, A.D.3
Pastor, R.W.4
-
33
-
-
0026240517
-
Asymptotic behavior and long-range interactions in aqueous solutions of poly(ethylene oxide)
-
Devanand, K.; Selser, J. C. Asymptotic behavior and long-range interactions in aqueous solutions of poly(ethylene oxide). Macromolecules 1991, 24, 5943-5947.
-
(1991)
Macromolecules
, vol.24
, pp. 5943-5947
-
-
Devanand, K.1
Selser, J.C.2
-
34
-
-
0027733616
-
Use of fast protein size-exclusion liquid chromatography to study the unfolding of proteins which denature through the molten globule
-
Uversky, V. N. Use of fast protein size-exclusion liquid chromatography to study the unfolding of proteins which denature through the molten globule. Biochemistry 1993, 32, 13288-13298.
-
(1993)
Biochemistry
, vol.32
, pp. 13288-13298
-
-
Uversky, V.N.1
-
35
-
-
77954720052
-
Hydrodynamic radius of polyethylene glycol in solution obtained by dynamic light scattering
-
Linegar, K. L.; Adeniran, A. E.; Kostko, A. F.; Anisimov, M. A. Hydrodynamic radius of polyethylene glycol in solution obtained by dynamic light scattering. Colloid J. 2010, 72, 279-281.
-
(2010)
Colloid J
, vol.72
, pp. 279-281
-
-
Linegar, K.L.1
Adeniran, A.E.2
Kostko, A.F.3
Anisimov, M.A.4
-
36
-
-
3042689834
-
Macromolecular crowding allows blunt-end ligation by DNA ligases from rat liver or escherichia coli
-
Zimmerman, S. B.; Pheiffer, B. H. Macromolecular crowding allows blunt-end ligation by DNA ligases from rat liver or escherichia coli. Proc. Natl. Acad. Sci. USA 1983, 80, 5852-5856.
-
(1983)
Proc. Natl. Acad. Sci. USA
, vol.80
, pp. 5852-5856
-
-
Zimmerman, S.B.1
Pheiffer, B.H.2
-
37
-
-
0022423258
-
Macromolecular crowding accelerates the cohesion of DNA fragments with complementary termini
-
Zimmerman, S. B.; Harrison, B. Macromolecular crowding accelerates the cohesion of DNA fragments with complementary termini. Nucleic Acids Res. 1985, 13, 2241-2249.
-
(1985)
Nucleic Acids Res
, vol.13
, pp. 2241-2249
-
-
Zimmerman, S.B.1
Harrison, B.2
-
38
-
-
0021761267
-
Polymer-stimulated ligation: Enhanced ligation of oligo-and polynucleotides by t4 rna ligase in polymer solutions
-
Harrison, B.; Zimmerman, S. B. Polymer-stimulated ligation: Enhanced ligation of oligo-and polynucleotides by t4 rna ligase in polymer solutions. Nucleic Acids Res. 1984, 12, 8235-8251.
-
(1984)
Nucleic Acids Res
, vol.12
, pp. 8235-8251
-
-
Harrison, B.1
Zimmerman, S.B.2
-
39
-
-
0000225096
-
Macromolecular crowding increases binding of DNA polymerase to DNA: An adaptive effect
-
Zimmerman, S. B.; Harrison, B. Macromolecular crowding increases binding of DNA polymerase to DNA: An adaptive effect. Proc. Natl. Acad. Sci. USA 1987, 84, 1871-1875.
-
(1987)
Proc. Natl. Acad. Sci. USA
, vol.84
, pp. 1871-1875
-
-
Zimmerman, S.B.1
Harrison, B.2
-
40
-
-
0023902229
-
Macromolecular crowding extends the range of conditions under which DNA polymerase is functional
-
Zimmerman, S. B.; Trach, S. O. Macromolecular crowding extends the range of conditions under which DNA polymerase is functional. Biochim. Biophys. Acta 1988, 949, 297-304.
-
(1988)
Biochim. Biophys. Acta
, vol.949
, pp. 297-304
-
-
Zimmerman, S.B.1
Trach, S.O.2
-
41
-
-
0026795172
-
Enhancement of RECA protein-promoted DNA strand exchange activity by volume-occupying agents
-
Lavery, P. E.; Kowalczykowski, S. C. Enhancement of RECA protein-promoted DNA strand exchange activity by volume-occupying agents. J. Biol. Chem. 1992, 267, 9307-9314.
-
(1992)
J. Biol. Chem
, vol.267
, pp. 9307-9314
-
-
Lavery, P.E.1
Kowalczykowski, S.C.2
-
42
-
-
0037044733
-
Volume exclusion effect as a driving force for reverse proteolysis. Implications for polypeptide assemblage in a macromolecular crowded milieu
-
Somalinga, B. R.; Roy, R. P. Volume exclusion effect as a driving force for reverse proteolysis. Implications for polypeptide assemblage in a macromolecular crowded milieu. J. Biol. Chem. 2002, 277, 43253-43261.
-
(2002)
J. Biol. Chem
, vol.277
, pp. 43253-43261
-
-
Somalinga, B.R.1
Roy, R.P.2
-
43
-
-
54049135963
-
Binding of calcium ions to RAS promotes RAS guanine nucleotide exchange under emulated physiological conditions
-
Liao, J. M.; Mo, Z. Y.; Wu, L. J.; Chen, J.; Liang, Y. Binding of calcium ions to RAS promotes RAS guanine nucleotide exchange under emulated physiological conditions. Biochim. Biophys. Acta 2008, 1784, 1560-1569.
-
(2008)
Biochim. Biophys. Acta
, vol.1784
, pp. 1560-1569
-
-
Liao, J.M.1
Mo, Z.Y.2
Wu, L.J.3
Chen, J.4
Liang, Y.5
-
44
-
-
76849096284
-
Non-linear effects of macromolecular crowding on enzymatic activity of multi-copper oxidase
-
Pozdnyakova, I.; Wittung-Stafshede, P. Non-linear effects of macromolecular crowding on enzymatic activity of multi-copper oxidase. Biochim. Biophys. Acta 2010, 1804, 740-744.
-
(2010)
Biochim. Biophys. Acta
, vol.1804
, pp. 740-744
-
-
Pozdnyakova, I.1
Wittung-Stafshede, P.2
-
45
-
-
79952849764
-
Effect of crowding by dextrans on the hydrolysis of N-succinyl-L-phenyl-ala-p-nitroanilide catalyzed by alpha-chymotrypsin
-
Pastor, I.; Vilaseca, E.; Madurga, S.; Garces, J. L.; Cascante, M.; Mas, F. Effect of crowding by dextrans on the hydrolysis of N-succinyl-L-phenyl-ala-p-nitroanilide catalyzed by alpha-chymotrypsin. J. Phys. Chem. B 2011, 115, 1115-1121.
-
(2011)
J. Phys. Chem. B
, vol.115
, pp. 1115-1121
-
-
Pastor, I.1
Vilaseca, E.2
Madurga, S.3
Garces, J.L.4
Cascante, M.5
Mas, F.6
-
46
-
-
84887008874
-
Behavior of plasmodium falciparum purine nucleoside phosphorylase in macromolecular crowded environment
-
Suthar, M. K.; Doharey, P. K.; Verma, A.; Saxena, J. K. Behavior of plasmodium falciparum purine nucleoside phosphorylase in macromolecular crowded environment. Int. J. Biol. Macromol. 2013, 62, 657-662.
-
(2013)
Int. J. Biol. Macromol
, vol.62
, pp. 657-662
-
-
Suthar, M.K.1
Doharey, P.K.2
Verma, A.3
Saxena, J.K.4
-
47
-
-
33846569091
-
Effects of macromolecular crowding on the intrinsic catalytic efficiency and structure of enterobactin-specific isochorismate synthase
-
Jiang, M.; Guo, Z. Effects of macromolecular crowding on the intrinsic catalytic efficiency and structure of enterobactin-specific isochorismate synthase. J. Am. Chem. Soc. 2007, 129, 730-731.
-
(2007)
J. Am. Chem. Soc
, vol.129
, pp. 730-731
-
-
Jiang, M.1
Guo, Z.2
-
48
-
-
84880004592
-
Molecular crowding enhanced atpase activity of the rna helicase eif4a correlates with compaction of its quaternary structure and association with eif4g
-
Akabayov, S. R.; Akabayov, B.; Richardson, C. C.; Wagner, G. Molecular crowding enhanced atpase activity of the rna helicase eif4a correlates with compaction of its quaternary structure and association with eif4g. J. Am. Chem. Soc. 2013, 135, 10040-10047.
-
(2013)
J. Am. Chem. Soc
, vol.135
, pp. 10040-10047
-
-
Akabayov, S.R.1
Akabayov, B.2
Richardson, C.C.3
Wagner, G.4
-
49
-
-
84875784804
-
A quantitative model of ERK map kinase phosphorylation in crowded media
-
Aoki, K.; Takahashi, K.; Kaizu, K.; Matsuda, M. A quantitative model of ERK map kinase phosphorylation in crowded media. Sci. Rep. 2013, 3, 1541.
-
(2013)
Sci. Rep
, vol.3
, pp. 1541
-
-
Aoki, K.1
Takahashi, K.2
Kaizu, K.3
Matsuda, M.4
-
50
-
-
79961243052
-
Processive phosphorylation of ERK map kinase in mammalian cells
-
Aoki, K.; Yamada, M.; Kunida, K.; Yasuda, S.; Matsuda, M. Processive phosphorylation of ERK map kinase in mammalian cells. Proc. Natl. Acad. Sci. USA 2011, 108, 12675-12680.
-
(2011)
Proc. Natl. Acad. Sci. USA
, vol.108
, pp. 12675-12680
-
-
Aoki, K.1
Yamada, M.2
Kunida, K.3
Yasuda, S.4
Matsuda, M.5
-
51
-
-
0037939764
-
Cytosol-mimetic chemistry: Kinetics of the trypsin-catalyzed hydrolysis of p-nitrophenyl acetate upon addition of polyethylene glycol and N-tert-butyl acetoacetamide
-
Asaad, N.; Engberts, J. B. Cytosol-mimetic chemistry: Kinetics of the trypsin-catalyzed hydrolysis of p-nitrophenyl acetate upon addition of polyethylene glycol and N-tert-butyl acetoacetamide. J. Am. Chem. Soc. 2003, 125, 6874-6875.
-
(2003)
J. Am. Chem. Soc
, vol.125
, pp. 6874-6875
-
-
Asaad, N.1
Engberts, J.B.2
-
52
-
-
84862751328
-
Enzyme activity in the crowded milieu
-
Vopel, T.; Makhatadze, G. I. Enzyme activity in the crowded milieu. PLoS One 2012, 7, e39418.
-
(2012)
PLoS One
, vol.7
-
-
Vopel, T.1
Makhatadze, G.I.2
-
53
-
-
0015239903
-
Enzyme reactions in polymer media
-
Laurent, T. C. Enzyme reactions in polymer media. Eur. J. Biochem. 1971, 21, 498-506.
-
(1971)
Eur. J. Biochem
, vol.21
, pp. 498-506
-
-
Laurent, T.C.1
-
54
-
-
0019883893
-
Effect of macromolecular crowding upon the structure and function of an enzyme: Glyceraldehyde-3-phosphate dehydrogenase
-
Minton, A. P.; Wilf, J. Effect of macromolecular crowding upon the structure and function of an enzyme: Glyceraldehyde-3-phosphate dehydrogenase. Biochemistry 1981, 20, 4821-4826.
-
(1981)
Biochemistry
, vol.20
, pp. 4821-4826
-
-
Minton, A.P.1
Wilf, J.2
-
55
-
-
0032167971
-
Implications of macromolecular crowding for signal transduction and metabolite channeling
-
Rohwer, J. M.; Postma, P. W.; Kholodenko, B. N.; Westerhoff, H. V. Implications of macromolecular crowding for signal transduction and metabolite channeling. Proc. Natl. Acad. Sci. USA 1998, 95, 10547-10552.
-
(1998)
Proc. Natl. Acad. Sci. USA
, vol.95
, pp. 10547-10552
-
-
Rohwer, J.M.1
Postma, P.W.2
Kholodenko, B.N.3
Westerhoff, H.V.4
-
56
-
-
0031705794
-
Subtleties in control by metabolic channeling and enzyme organization
-
Kholodenko, B. N.; Rohwer, J. M.; Cascante, M.; Westerhoff, H. V. Subtleties in control by metabolic channeling and enzyme organization. Mol. Cell. Biochem. 1998, 184, 311-320.
-
(1998)
Mol. Cell. Biochem
, vol.184
, pp. 311-320
-
-
Kholodenko, B.N.1
Rohwer, J.M.2
Cascante, M.3
Westerhoff, H.V.4
-
57
-
-
79951575052
-
What is the true enzyme kinetics in the biological system? An investigation of macromolecular crowding effect upon enzyme kinetics of glucose-6-phosphate dehydrogenase
-
Norris, M. G.; Malys, N. What is the true enzyme kinetics in the biological system? An investigation of macromolecular crowding effect upon enzyme kinetics of glucose-6-phosphate dehydrogenase. Biochem. Biophys. Res. Commun. 2011, 405, 388-392.
-
(2011)
Biochem. Biophys. Res. Commun
, vol.405
, pp. 388-392
-
-
Norris, M.G.1
Malys, N.2
-
58
-
-
39049105287
-
Effects of macromolecular crowding on glycoprotein processing enzymes
-
Totani, K.; Ihara, Y.; Matsuo, I.; Ito, Y. Effects of macromolecular crowding on glycoprotein processing enzymes. J. Am. Chem. Soc. 2008, 130, 2101-2107.
-
(2008)
J. Am. Chem. Soc
, vol.130
, pp. 2101-2107
-
-
Totani, K.1
Ihara, Y.2
Matsuo, I.3
Ito, Y.4
-
59
-
-
33746868886
-
Applications of isothermal titration calorimetry to measure enzyme kinetics and activity in complex solutions
-
Olsen, S. N. Applications of isothermal titration calorimetry to measure enzyme kinetics and activity in complex solutions. Thermochim. Acta 2006, 448, 12-18.
-
(2006)
Thermochim. Acta
, vol.448
, pp. 12-18
-
-
Olsen, S.N.1
-
60
-
-
84899019693
-
Macromolecular crowding effect upon in vitro enzyme kinetics: Mixed activation-diffusion control of the oxidation of nadh by pyruvate catalyzed by lactate dehydrogenase
-
Balcells, C.; Pastor, I.; Vilaseca, E.; Madurga, S.; Cascante, M.; Mas, F. Macromolecular crowding effect upon in vitro enzyme kinetics: Mixed activation-diffusion control of the oxidation of nadh by pyruvate catalyzed by lactate dehydrogenase. J. Phys. Chem. B 2014, 118, 4062-4068.
-
(2014)
J. Phys. Chem. B
, vol.118
, pp. 4062-4068
-
-
Balcells, C.1
Pastor, I.2
Vilaseca, E.3
Madurga, S.4
Cascante, M.5
Mas, F.6
-
61
-
-
33845218867
-
Effect of crowding by dextrans and ficolls on the rate of alkaline phosphatase-catalyzed hydrolysis: A size-dependent investigation
-
Homchaudhuri, L.; Sarma, N.; Swaminathan, R. Effect of crowding by dextrans and ficolls on the rate of alkaline phosphatase-catalyzed hydrolysis: A size-dependent investigation. Biopolymers 2006, 83, 477-486.
-
(2006)
Biopolymers
, vol.83
, pp. 477-486
-
-
Homchaudhuri, L.1
Sarma, N.2
Swaminathan, R.3
-
62
-
-
53249113141
-
Macromolecular crowding and its potential impact on nuclear function
-
Richter, K.; Nessling, M.; Lichter, P. Macromolecular crowding and its potential impact on nuclear function. Biochim. Biophys. Acta 2008, 1783, 2100-2107.
-
(2008)
Biochim. Biophys. Acta
, vol.1783
, pp. 2100-2107
-
-
Richter, K.1
Nessling, M.2
Lichter, P.3
-
63
-
-
0031030690
-
The effect of macromolecular crowding on chaperonin-mediated protein folding
-
Martin, J.; Hartl, F. U. The effect of macromolecular crowding on chaperonin-mediated protein folding. Proc. Natl. Acad. Sci. USA 1997, 94, 1107-1112.
-
(1997)
Proc. Natl. Acad. Sci. USA
, vol.94
, pp. 1107-1112
-
-
Martin, J.1
Hartl, F.U.2
-
64
-
-
84899894047
-
Crowding activates CLPB and enhances its association with dnak for efficient protein aggregate reactivation
-
Martin, I.; Celaya, G.; Alfonso, C.; Moro, F.; Rivas, G.; Muga, A. Crowding activates CLPB and enhances its association with dnak for efficient protein aggregate reactivation. Biophys. J. 2014, 106, 2017-2027.
-
(2014)
Biophys. J
, vol.106
, pp. 2017-2027
-
-
Martin, I.1
Celaya, G.2
Alfonso, C.3
Moro, F.4
Rivas, G.5
Muga, A.6
-
65
-
-
39749092306
-
Suppression of linear side products by macromolecular crowding in nonribosomal enterobactin biosynthesis
-
Guo, Z. F.; Jiang, M.; Zheng, S.; Guo, Z. Suppression of linear side products by macromolecular crowding in nonribosomal enterobactin biosynthesis. Org. Lett. 2008, 10, 649-652.
-
(2008)
Org. Lett
, vol.10
, pp. 649-652
-
-
Guo, Z.F.1
Jiang, M.2
Zheng, S.3
Guo, Z.4
-
66
-
-
77954316300
-
Structural change of the enterobactin synthetase in crowded solution and its relation to crowding-enhanced product specificity in nonribosomal enterobactin biosynthesis
-
Guo, Z. F.; Jiang, M.; Zheng, S.; Guo, Z. Structural change of the enterobactin synthetase in crowded solution and its relation to crowding-enhanced product specificity in nonribosomal enterobactin biosynthesis. Bioorg. Med. Chem. Lett. 2010, 20, 3855-3858.
-
(2010)
Bioorg. Med. Chem. Lett
, vol.20
, pp. 3855-3858
-
-
Guo, Z.F.1
Jiang, M.2
Zheng, S.3
Guo, Z.4
-
67
-
-
0032544193
-
The nonribosomal peptide synthetase hmwp2 forms a thiazoline ring during biogenesis of yersiniabactin, an iron-chelating virulence factor of yersinia pestis
-
Gehring, A. M.; Mori, I.; Perry, R. D.; Walsh, C. T. The nonribosomal peptide synthetase hmwp2 forms a thiazoline ring during biogenesis of yersiniabactin, an iron-chelating virulence factor of yersinia pestis. Biochemistry 1998, 37, 11637-11650.
-
(1998)
Biochemistry
, vol.37
, pp. 11637-11650
-
-
Gehring, A.M.1
Mori, I.2
Perry, R.D.3
Walsh, C.T.4
-
68
-
-
79952551619
-
Increase of sars-cov 3cl peptidase activity due to macromolecular crowding effects in the milieu composition
-
Okamoto, D. N.; Oliveira, L. C.; Kondo, M. Y.; Cezari, M. H.; Szeltner, Z.; Juhasz, T.; Juliano, M. A.; Polgar, L.; Juliano, L.; Gouvea, I. E. Increase of sars-cov 3cl peptidase activity due to macromolecular crowding effects in the milieu composition. Biol. Chem. 2010, 391, 1461-1468.
-
(2010)
Biol. Chem
, vol.391
, pp. 1461-1468
-
-
Okamoto, D.N.1
Oliveira, L.C.2
Kondo, M.Y.3
Cezari, M.H.4
Szeltner, Z.5
Juhasz, T.6
Juliano, M.A.7
Polgar, L.8
Juliano, L.9
Gouvea, I.E.10
-
69
-
-
18144372698
-
Structure of a cyanobacterial bluf protein, tll0078, containing a novel fad-binding blue light sensor domain
-
Kita, A.; Okajima, K.; Morimoto, Y.; Ikeuchi, M.; Miki, K. Structure of a cyanobacterial bluf protein, tll0078, containing a novel fad-binding blue light sensor domain. J. Mol. Biol. 2005, 349, 1-9.
-
(2005)
J. Mol. Biol
, vol.349
, pp. 1-9
-
-
Kita, A.1
Okajima, K.2
Morimoto, Y.3
Ikeuchi, M.4
Miki, K.5
-
70
-
-
33748300578
-
Crystal structures of the appa bluf domain photoreceptor provide insights into blue light-mediated signal transduction
-
Jung, A.; Reinstein, J.; Domratcheva, T.; Shoeman, R. L.; Schlichting, I. Crystal structures of the appa bluf domain photoreceptor provide insights into blue light-mediated signal transduction. J. Mol. Biol. 2006, 362, 717-732.
-
(2006)
J. Mol. Biol
, vol.362
, pp. 717-732
-
-
Jung, A.1
Reinstein, J.2
Domratcheva, T.3
Shoeman, R.L.4
Schlichting, I.5
-
71
-
-
22344445758
-
Biochemical and functional characterization of bluf-type flavin-binding proteins of two species of cyanobacteria
-
Okajima, K.; Yoshihara, S.; Fukushima, Y.; Geng, X.; Katayama, M.; Higashi, S.; Watanabe, M.; Sato, S.; Tabata, S.; Shibata, Y.; et al. Biochemical and functional characterization of bluf-type flavin-binding proteins of two species of cyanobacteria. J. Biochem. 2005, 137, 741-750.
-
(2005)
J. Biochem
, vol.137
, pp. 741-750
-
-
Okajima, K.1
Yoshihara, S.2
Fukushima, Y.3
Geng, X.4
Katayama, M.5
Higashi, S.6
Watanabe, M.7
Sato, S.8
Tabata, S.9
Shibata, Y.10
-
72
-
-
79955439354
-
Macromolecular crowding effects on reactions of tepixd (tll0078)
-
Toyooka, T.; Tanaka, K.; Okajima, K.; Ikeuchi, M.; Tokutomi, S.; Terazima, M. Macromolecular crowding effects on reactions of tepixd (tll0078). Photochem. Photobiol. 2010, 87, 584-589.
-
(2010)
Photochem. Photobiol
, vol.87
, pp. 584-589
-
-
Toyooka, T.1
Tanaka, K.2
Okajima, K.3
Ikeuchi, M.4
Tokutomi, S.5
Terazima, M.6
-
73
-
-
84917700968
-
Interactions of macromolecular crowding agents and cosolutes with small-molecule substrates: Effect on horseradish peroxidase activity with two different substrates
-
Aumiller, W. M., Jr.; Davis, B. W.; Hatzakis, E.; Keating, C. D. Interactions of macromolecular crowding agents and cosolutes with small-molecule substrates: Effect on horseradish peroxidase activity with two different substrates. J. Phys. Chem. B 2014, 118, 10624-10632.
-
(2014)
J. Phys. Chem. B
, vol.118
, pp. 10624-10632
-
-
Aumiller, W.M.1
Davis, B.W.2
Hatzakis, E.3
Keating, C.D.4
-
74
-
-
0032749078
-
Intrinsically unstructured proteins: Re-assessing the protein structure-function paradigm
-
Wright, P. E.; Dyson, H. J. Intrinsically unstructured proteins: Re-assessing the protein structure-function paradigm. J. Mol. Biol. 1999, 293, 321-331.
-
(1999)
J. Mol. Biol
, vol.293
, pp. 321-331
-
-
Wright, P.E.1
Dyson, H.J.2
-
75
-
-
0034669882
-
Why are "natively unfolded" proteins unstructured under physiologic conditions?
-
Uversky, V. N.; Gillespie, J. R.; Fink, A. L. Why are "natively unfolded" proteins unstructured under physiologic conditions? Proteins 2000, 41, 415-427.
-
(2000)
Proteins
, vol.41
, pp. 415-427
-
-
Uversky, V.N.1
Gillespie, J.R.2
Fink, A.L.3
-
76
-
-
0035022941
-
Intrinsically disordered protein
-
Dunker, A. K.; Lawson, J. D.; Brown, C. J.; Williams, R. M.; Romero, P.; Oh, J. S.; Oldfield, C. J.; Campen, A. M.; Ratliff, C. M.; Hipps, K. W.; et al. Intrinsically disordered protein. J. Mol. Graph. Model. 2001, 19, 26-59.
-
(2001)
J. Mol. Graph. Model
, vol.19
, pp. 26-59
-
-
Dunker, A.K.1
Lawson, J.D.2
Brown, C.J.3
Williams, R.M.4
Romero, P.5
Oh, J.S.6
Oldfield, C.J.7
Campen, A.M.8
Ratliff, C.M.9
Hipps, K.W.10
-
77
-
-
0034867975
-
The protein trinity-Linking function and disorder
-
Dunker, A. K.; Obradovic, Z. The protein trinity-Linking function and disorder. Nat. Biotechnol. 2001, 19, 805-806.
-
(2001)
Nat. Biotechnol
, vol.19
, pp. 805-806
-
-
Dunker, A.K.1
Obradovic, Z.2
-
78
-
-
0036468397
-
Coupling of folding and binding for unstructured proteins
-
Dyson, H. J.; Wright, P. E. Coupling of folding and binding for unstructured proteins. Curr. Opin. Struct. Biol. 2002, 12, 54-60.
-
(2002)
Curr. Opin. Struct. Biol
, vol.12
, pp. 54-60
-
-
Dyson, H.J.1
Wright, P.E.2
-
79
-
-
0036402827
-
Identification and functions of usefully disordered proteins
-
Dunker, A. K.; Brown, C. J.; Obradovic, Z. Identification and functions of usefully disordered proteins. Adv. Protein Chem. 2002, 62, 25-49.
-
(2002)
Adv. Protein Chem
, vol.62
, pp. 25-49
-
-
Dunker, A.K.1
Brown, C.J.2
Obradovic, Z.3
-
80
-
-
0037188377
-
Intrinsic disorder and protein function
-
Dunker, A. K.; Brown, C. J.; Lawson, J. D.; Iakoucheva, L. M.; Obradovic, Z. Intrinsic disorder and protein function. Biochemistry 2002, 41, 6573-6582.
-
(2002)
Biochemistry
, vol.41
, pp. 6573-6582
-
-
Dunker, A.K.1
Brown, C.J.2
Lawson, J.D.3
Iakoucheva, L.M.4
Obradovic, Z.5
-
81
-
-
0036803243
-
Intrinsically unstructured proteins
-
Tompa, P. Intrinsically unstructured proteins. Trends Biochem. Sci. 2002, 27, 527-533.
-
(2002)
Trends Biochem. Sci
, vol.27
, pp. 527-533
-
-
Tompa, P.1
-
82
-
-
0036128797
-
Natively unfolded proteins: A point where biology waits for physics
-
Uversky, V. N. Natively unfolded proteins: A point where biology waits for physics. Protein Sci. 2002, 11, 739-756.
-
(2002)
Protein Sci
, vol.11
, pp. 739-756
-
-
Uversky, V.N.1
-
83
-
-
0036153571
-
What does it mean to be natively unfolded?
-
Uversky, V. N. What does it mean to be natively unfolded? Eur. J. Biochem. 2002, 269, 2-12.
-
(2002)
Eur. J. Biochem
, vol.269
, pp. 2-12
-
-
Uversky, V.N.1
-
84
-
-
0141861067
-
Protein folding revisited. A polypeptide chain at the folding-misfolding-nonfolding cross-roads: Which way to go?
-
Uversky, V. N. Protein folding revisited. A polypeptide chain at the folding-misfolding-nonfolding cross-roads: Which way to go? Cell Mol. Life Sci. 2003, 60, 1852-1871.
-
(2003)
Cell Mol. Life Sci
, vol.60
, pp. 1852-1871
-
-
Uversky, V.N.1
-
85
-
-
3442902456
-
The role of structural disorder in the function of RNA and protein chaperones
-
Tompa, P.; Csermely, P. The role of structural disorder in the function of RNA and protein chaperones. FASEB J. 2004, 18, 1169-1175.
-
(2004)
FASEB J
, vol.18
, pp. 1169-1175
-
-
Tompa, P.1
Csermely, P.2
-
86
-
-
24944511034
-
Natively disordered proteins
-
Buchner, J., Kiefhaber, T., Eds.; Wiley-VCH Verlag GmbH & Co.: Weinheim, Germany
-
Daughdrill, G. W.; Pielak, G. J.; Uversky, V. N.; Cortese, M. S.; Dunker, A. K. Natively disordered proteins. In Handbook of Protein Folding; Buchner, J., Kiefhaber, T., Eds.; Wiley-VCH Verlag GmbH & Co.: Weinheim, Germany, 2005; pp. 271-353.
-
(2005)
Handbook of Protein Folding
, pp. 271-353
-
-
Daughdrill, G.W.1
Pielak, G.J.2
Uversky, V.N.3
Cortese, M.S.4
Dunker, A.K.5
-
87
-
-
27144464910
-
Flexible nets: The roles of intrinsic disorder in protein interaction networks
-
Dunker, A. K.; Cortese, M. S.; Romero, P.; Iakoucheva, L. M.; Uversky, V. N. Flexible nets: The roles of intrinsic disorder in protein interaction networks. FEBS J. 2005, 272, 5129-5148.
-
(2005)
FEBS J
, vol.272
, pp. 5129-5148
-
-
Dunker, A.K.1
Cortese, M.S.2
Romero, P.3
Iakoucheva, L.M.4
Uversky, V.N.5
-
88
-
-
14644435825
-
Intrinsically unstructured proteins and their functions
-
Dyson, H. J.; Wright, P. E. Intrinsically unstructured proteins and their functions. Nat. Rev. Mol. Cell Biol. 2005, 6, 197-208.
-
(2005)
Nat. Rev. Mol. Cell Biol
, vol.6
, pp. 197-208
-
-
Dyson, H.J.1
Wright, P.E.2
-
89
-
-
24944546549
-
Coupled folding and binding with alpha-helix-forming molecular recognition elements
-
Oldfield, C. J.; Cheng, Y.; Cortese, M. S.; Romero, P.; Uversky, V. N.; Dunker, A. K. Coupled folding and binding with alpha-helix-forming molecular recognition elements. Biochemistry 2005, 44, 12454-12470.
-
(2005)
Biochemistry
, vol.44
, pp. 12454-12470
-
-
Oldfield, C.J.1
Cheng, Y.2
Cortese, M.S.3
Romero, P.4
Uversky, V.N.5
Dunker, A.K.6
-
90
-
-
20444376186
-
The interplay between structure and function in intrinsically unstructured proteins
-
Tompa, P. The interplay between structure and function in intrinsically unstructured proteins. FEBS Lett. 2005, 579, 3346-3354.
-
(2005)
FEBS Lett
, vol.579
, pp. 3346-3354
-
-
Tompa, P.1
-
91
-
-
23944514504
-
Structural disorder throws new light on moonlighting
-
Tompa, P.; Szasz, C.; Buday, L. Structural disorder throws new light on moonlighting. Trends Biochem. Sci. 2005, 30, 484-489.
-
(2005)
Trends Biochem. Sci
, vol.30
, pp. 484-489
-
-
Tompa, P.1
Szasz, C.2
Buday, L.3
-
92
-
-
25144472591
-
Showing your id: Intrinsic disorder as an ID for recognition, regulation and cell signaling
-
Uversky, V. N.; Oldfield, C. J.; Dunker, A. K. Showing your id: Intrinsic disorder as an ID for recognition, regulation and cell signaling. J. Mol. Recognit. 2005, 18, 343-384.
-
(2005)
J. Mol. Recognit
, vol.18
, pp. 343-384
-
-
Uversky, V.N.1
Oldfield, C.J.2
Dunker, A.K.3
-
93
-
-
33847795359
-
Intrinsic disorder and functional proteomics
-
Radivojac, P.; Iakoucheva, L. M.; Oldfield, C. J.; Obradovic, Z.; Uversky, V. N.; Dunker, A. K. Intrinsic disorder and functional proteomics. Biophys. J. 2007, 92, 1439-1456.
-
(2007)
Biophys. J
, vol.92
, pp. 1439-1456
-
-
Radivojac, P.1
Iakoucheva, L.M.2
Oldfield, C.J.3
Obradovic, Z.4
Uversky, V.N.5
Dunker, A.K.6
-
94
-
-
34249282661
-
Functional anthology of intrinsic disorder. 2. Cellular components, domains, technical terms, developmental processes, and coding sequence diversities correlated with long disordered regions
-
Vucetic, S.; Xie, H.; Iakoucheva, L. M.; Oldfield, C. J.; Dunker, A. K.; Obradovic, Z.; Uversky, V. N. Functional anthology of intrinsic disorder. 2. Cellular components, domains, technical terms, developmental processes, and coding sequence diversities correlated with long disordered regions. J. Proteome Res. 2007, 6, 1899-1916.
-
(2007)
J. Proteome Res
, vol.6
, pp. 1899-1916
-
-
Vucetic, S.1
Xie, H.2
Iakoucheva, L.M.3
Oldfield, C.J.4
Dunker, A.K.5
Obradovic, Z.6
Uversky, V.N.7
-
95
-
-
33847768609
-
Functional anthology of intrinsic disorder. 1. Biological processes and functions of proteins with long disordered regions
-
Xie, H.; Vucetic, S.; Iakoucheva, L. M.; Oldfield, C. J.; Dunker, A. K.; Uversky, V. N.; Obradovic, Z. Functional anthology of intrinsic disorder. 1. Biological processes and functions of proteins with long disordered regions. J. Proteome Res. 2007, 6, 1882-1898.
-
(2007)
J. Proteome Res
, vol.6
, pp. 1882-1898
-
-
Xie, H.1
Vucetic, S.2
Iakoucheva, L.M.3
Oldfield, C.J.4
Dunker, A.K.5
Uversky, V.N.6
Obradovic, Z.7
-
96
-
-
33847783298
-
Functional anthology of intrinsic disorder. 3. Ligands, post-translational modifications, and diseases associated with intrinsically disordered proteins
-
Xie, H.; Vucetic, S.; Iakoucheva, L. M.; Oldfield, C. J.; Dunker, A. K.; Obradovic, Z.; Uversky, V. N. Functional anthology of intrinsic disorder. 3. Ligands, post-translational modifications, and diseases associated with intrinsically disordered proteins. J. Proteome Res. 2007, 6, 1917-1932.
-
(2007)
J. Proteome Res
, vol.6
, pp. 1917-1932
-
-
Xie, H.1
Vucetic, S.2
Iakoucheva, L.M.3
Oldfield, C.J.4
Dunker, A.K.5
Obradovic, Z.6
Uversky, V.N.7
-
97
-
-
50049097448
-
Intrinsic disorder in scaffold proteins: Getting more from less
-
Cortese, M. S.; Uversky, V. N.; Dunker, A. K. Intrinsic disorder in scaffold proteins: Getting more from less. Prog. Biophys. Mol. Biol. 2008, 98, 85-106.
-
(2008)
Prog. Biophys. Mol. Biol
, vol.98
, pp. 85-106
-
-
Cortese, M.S.1
Uversky, V.N.2
Dunker, A.K.3
-
98
-
-
57049095821
-
Function and structure of inherently disordered proteins
-
Dunker, A. K.; Silman, I.; Uversky, V. N.; Sussman, J. L. Function and structure of inherently disordered proteins. Curr. Opin. Struct. Biol. 2008, 18, 756-764.
-
(2008)
Curr. Opin. Struct. Biol
, vol.18
, pp. 756-764
-
-
Dunker, A.K.1
Silman, I.2
Uversky, V.N.3
Sussman, J.L.4
-
99
-
-
40949105259
-
Signal transduction via unstructured protein conduits
-
Dunker, A. K.; Uversky, V. N. Signal transduction via unstructured protein conduits. Nat. Chem. Biol. 2008, 4, 229-230.
-
(2008)
Nat. Chem. Biol
, vol.4
, pp. 229-230
-
-
Dunker, A.K.1
Uversky, V.N.2
-
100
-
-
52249085709
-
The unfoldomics decade: An update on intrinsically disordered proteins
-
Dunker, A. K.; Oldfield, C. J.; Meng, J.; Romero, P.; Yang, J. Y.; Chen, J. W.; Vacic, V.; Obradovic, Z.; Uversky, V. N. The unfoldomics decade: An update on intrinsically disordered proteins. BMC Genomics 2008, 9, S1.
-
(2008)
BMC Genomics
, vol.9
-
-
Dunker, A.K.1
Oldfield, C.J.2
Meng, J.3
Romero, P.4
Yang, J.Y.5
Chen, J.W.6
Vacic, V.7
Obradovic, Z.8
Uversky, V.N.9
-
101
-
-
40949117264
-
Flexible nets: Disorder and induced fit in the associations of p53 and 14-3-3 with their partners
-
Oldfield, C. J.; Meng, J.; Yang, J. Y.; Yang, M. Q.; Uversky, V. N.; Dunker, A. K. Flexible nets: Disorder and induced fit in the associations of p53 and 14-3-3 with their partners. BMC Genomics 2008, 9, S1.
-
(2008)
BMC Genomics
, vol.9
-
-
Oldfield, C.J.1
Meng, J.2
Yang, J.Y.3
Yang, M.Q.4
Uversky, V.N.5
Dunker, A.K.6
-
102
-
-
41149178980
-
A careful disorderliness in the proteome: Sites for interaction and targets for future therapies
-
Russell, R. B.; Gibson, T. J. A careful disorderliness in the proteome: Sites for interaction and targets for future therapies. FEBS Lett. 2008, 582, 1271-1275.
-
(2008)
FEBS Lett
, vol.582
, pp. 1271-1275
-
-
Russell, R.B.1
Gibson, T.J.2
-
103
-
-
37749053887
-
Fuzzy complexes: Polymorphism and structural disorder in protein-protein interactions
-
Tompa, P.; Fuxreiter, M. Fuzzy complexes: Polymorphism and structural disorder in protein-protein interactions. Trends Biochem. Sci. 2008, 33, 2-8.
-
(2008)
Trends Biochem. Sci
, vol.33
, pp. 2-8
-
-
Tompa, P.1
Fuxreiter, M.2
-
104
-
-
57149085681
-
Biochemistry. Controlled chaos
-
Uversky, V. N.; Dunker, A. K. Biochemistry. Controlled chaos. Science 2008, 322, 1340-1341.
-
(2008)
Science
, vol.322
, pp. 1340-1341
-
-
Uversky, V.N.1
Dunker, A.K.2
-
106
-
-
65249102824
-
Close encounters of the third kind: Disordered domains and the interactions of proteins
-
Tompa, P.; Fuxreiter, M.; Oldfield, C. J.; Simon, I.; Dunker, A. K.; Uversky, V. N. Close encounters of the third kind: Disordered domains and the interactions of proteins. Bioessays 2009, 31, 328-335.
-
(2009)
Bioessays
, vol.31
, pp. 328-335
-
-
Tompa, P.1
Fuxreiter, M.2
Oldfield, C.J.3
Simon, I.4
Dunker, A.K.5
Uversky, V.N.6
-
108
-
-
0034570889
-
Intrinsic protein disorder in complete genomes
-
Dunker, A. K.; Obradovic, Z.; Romero, P.; Garner, E. C.; Brown, C. J. Intrinsic protein disorder in complete genomes. Genome Inform. Ser. Workshop Genome Inform. 2000, 11, 161-171.
-
(2000)
Genome Inform. Ser. Workshop Genome Inform
, vol.11
, pp. 161-171
-
-
Dunker, A.K.1
Obradovic, Z.2
Romero, P.3
Garner, E.C.4
Brown, C.J.5
-
109
-
-
77949328500
-
The mysterious unfoldome: Structureless, underappreciated, yet vital part of any given proteome
-
Uversky, V. N. The mysterious unfoldome: Structureless, underappreciated, yet vital part of any given proteome. J. Biomed. Biotechnol. 2010, 2010, 568068.
-
(2010)
J. Biomed. Biotechnol
, vol.2010
-
-
Uversky, V.N.1
-
110
-
-
1542358787
-
Prediction and functional analysis of native disorder in proteins from the three kingdoms of life
-
Ward, J. J.; Sodhi, J. S.; McGuffin, L. J.; Buxton, B. F.; Jones, D. T. Prediction and functional analysis of native disorder in proteins from the three kingdoms of life. J. Mol. Biol. 2004, 337, 635-645.
-
(2004)
J. Mol. Biol
, vol.337
, pp. 635-645
-
-
Ward, J.J.1
Sodhi, J.S.2
McGuffin, L.J.3
Buxton, B.F.4
Jones, D.T.5
-
111
-
-
0036408751
-
Intrinsic disorder in cell-signaling and cancer-associated proteins
-
Iakoucheva, L. M.; Brown, C. J.; Lawson, J. D.; Obradovic, Z.; Dunker, A. K. Intrinsic disorder in cell-signaling and cancer-associated proteins. J. Mol. Biol. 2002, 323, 573-584.
-
(2002)
J. Mol. Biol
, vol.323
, pp. 573-584
-
-
Iakoucheva, L.M.1
Brown, C.J.2
Lawson, J.D.3
Obradovic, Z.4
Dunker, A.K.5
-
112
-
-
0002086583
-
Nucleotide binding proteins
-
Balaban, M., Ed.; Elsevier/North-Holland Biomedical Press: New York, NY, USA
-
Schulz, G. E. Nucleotide binding proteins. In Molecular Mechanism of Biological Recognition; Balaban, M., Ed.; Elsevier/North-Holland Biomedical Press: New York, NY, USA, 1979; pp. 79-94.
-
(1979)
Molecular Mechanism of Biological Recognition
, pp. 79-94
-
-
Schulz, G.E.1
-
113
-
-
0027311259
-
Close encounters: Why unstructured, polymeric domains can increase rates of specific macromolecular association
-
Pontius, B. W. Close encounters: Why unstructured, polymeric domains can increase rates of specific macromolecular association. Trends Biochem. Sci. 1993, 18, 181-186.
-
(1993)
Trends Biochem. Sci
, vol.18
, pp. 181-186
-
-
Pontius, B.W.1
-
114
-
-
23444450909
-
Coupling of local folding to site-specific binding of proteins to DNA
-
Spolar, R. S.; Record, M. T., Jr. Coupling of local folding to site-specific binding of proteins to DNA. Science 1994, 263, 777-784.
-
(1994)
Science
, vol.263
, pp. 777-784
-
-
Spolar, R.S.1
Record, M.T.2
-
115
-
-
0029100207
-
Flexible docking and design
-
Rosenfeld, R.; Vajda, S.; DeLisi, C. Flexible docking and design. Annu. Rev. Biophys. Biomol. Struct. 1995, 24, 677-700.
-
(1995)
Annu. Rev. Biophys. Biomol. Struct
, vol.24
, pp. 677-700
-
-
Rosenfeld, R.1
Vajda, S.2
DeLisi, C.3
-
116
-
-
0030976078
-
Cell biology. The importance of being unfolded
-
Plaxco, K. W.; Gross, M. Cell biology. The importance of being unfolded. Nature 1997, 386, 657-659.
-
(1997)
Nature
, vol.386
, pp. 657-659
-
-
Plaxco, K.W.1
Gross, M.2
-
117
-
-
33644754087
-
Induced fit and "lock and key" recognition of 5S RNA by zinc fingers of transcription factor iiia
-
Lee, B. M.; Xu, J.; Clarkson, B. K.; Martinez-Yamout, M. A.; Dyson, H. J.; Case, D. A.; Gottesfeld, J. M.; Wright, P. E. Induced fit and "lock and key" recognition of 5S RNA by zinc fingers of transcription factor iiia. J. Mol. Biol. 2006, 357, 275-291.
-
(2006)
J. Mol. Biol
, vol.357
, pp. 275-291
-
-
Lee, B.M.1
Xu, J.2
Clarkson, B.K.3
Martinez-Yamout, M.A.4
Dyson, H.J.5
Case, D.A.6
Gottesfeld, J.M.7
Wright, P.E.8
-
118
-
-
34250821717
-
Mechanism of coupled folding and binding of an intrinsically disordered protein
-
Sugase, K.; Dyson, H. J.; Wright, P. E. Mechanism of coupled folding and binding of an intrinsically disordered protein. Nature 2007, 447, 1021-1025.
-
(2007)
Nature
, vol.447
, pp. 1021-1025
-
-
Sugase, K.1
Dyson, H.J.2
Wright, P.E.3
-
119
-
-
48249097986
-
Intrinsically disordered proteins in human diseases: Introducing the d2 concept
-
Uversky, V. N.; Oldfield, C. J.; Dunker, A. K. Intrinsically disordered proteins in human diseases: Introducing the d2 concept. Annu. Rev. Biophys. 2008, 37, 215-246.
-
(2008)
Annu. Rev. Biophys
, vol.37
, pp. 215-246
-
-
Uversky, V.N.1
Oldfield, C.J.2
Dunker, A.K.3
-
120
-
-
0034894258
-
Effects of macromolecular crowding on the intrinsically disordered proteins c-fos and p27(kip1)
-
Flaugh, S. L.; Lumb, K. J. Effects of macromolecular crowding on the intrinsically disordered proteins c-fos and p27(kip1). Biomacromolecules 2001, 2, 538-540.
-
(2001)
Biomacromolecules
, vol.2
, pp. 538-540
-
-
Flaugh, S.L.1
Lumb, K.J.2
-
121
-
-
0034646289
-
Intrinsic structural disorder of the C-terminal activation domain from the BZIP transcription factor fos
-
Campbell, K. M.; Terrell, A. R.; Laybourn, P. J.; Lumb, K. J. Intrinsic structural disorder of the C-terminal activation domain from the BZIP transcription factor fos. Biochemistry 2000, 39, 2708-2713.
-
(2000)
Biochemistry
, vol.39
, pp. 2708-2713
-
-
Campbell, K.M.1
Terrell, A.R.2
Laybourn, P.J.3
Lumb, K.J.4
-
122
-
-
0037154116
-
Functional consequences of preorganized helical structure in the intrinsically disordered cell-cycle inhibitor p27(kip1)
-
Bienkiewicz, E. A.; Adkins, J. N.; Lumb, K. J. Functional consequences of preorganized helical structure in the intrinsically disordered cell-cycle inhibitor p27(kip1). Biochemistry 2002, 41, 752-759.
-
(2002)
Biochemistry
, vol.41
, pp. 752-759
-
-
Bienkiewicz, E.A.1
Adkins, J.N.2
Lumb, K.J.3
-
123
-
-
4544252011
-
The effect of macromolecular crowding on protein aggregation and amyloid fibril formation
-
Munishkina, L. A.; Cooper, E. M.; Uversky, V. N.; Fink, A. L. The effect of macromolecular crowding on protein aggregation and amyloid fibril formation. J. Mol. Recognit. 2004, 17, 456-464.
-
(2004)
J. Mol. Recognit
, vol.17
, pp. 456-464
-
-
Munishkina, L.A.1
Cooper, E.M.2
Uversky, V.N.3
Fink, A.L.4
-
124
-
-
29544433937
-
Macromolecular crowding in the Escherichia coli periplasm maintains alpha-synuclein disorder
-
McNulty, B. C.; Young, G. B.; Pielak, G. J. Macromolecular crowding in the Escherichia coli periplasm maintains alpha-synuclein disorder. J. Mol. Biol. 2006, 355, 893-897.
-
(2006)
J. Mol. Biol
, vol.355
, pp. 893-897
-
-
McNulty, B.C.1
Young, G.B.2
Pielak, G.J.3
-
125
-
-
57749111581
-
Mimicking the plant cell interior under water stress by macromolecular crowding: Disordered dehydrin proteins are highly resistant to structural collapse
-
Mouillon, J. M.; Eriksson, S. K.; Harryson, P. Mimicking the plant cell interior under water stress by macromolecular crowding: Disordered dehydrin proteins are highly resistant to structural collapse. Plant Physiol. 2008, 148, 1925-1937.
-
(2008)
Plant Physiol
, vol.148
, pp. 1925-1937
-
-
Mouillon, J.M.1
Eriksson, S.K.2
Harryson, P.3
-
126
-
-
0036792049
-
Flgm gains structure in living cells
-
Dedmon, M. M.; Patel, C. N.; Young, G. B.; Pielak, G. J. Flgm gains structure in living cells. Proc. Natl. Acad. Sci. USA 2002, 99, 12681-12684.
-
(2002)
Proc. Natl. Acad. Sci. USA
, vol.99
, pp. 12681-12684
-
-
Dedmon, M.M.1
Patel, C.N.2
Young, G.B.3
Pielak, G.J.4
-
127
-
-
0032570318
-
The C-terminal half of the anti-sigma factor flgm contains a dynamic equilibrium solution structure favoring helical conformations
-
Daughdrill, G. W.; Hanely, L. J.; Dahlquist, F. W. The C-terminal half of the anti-sigma factor flgm contains a dynamic equilibrium solution structure favoring helical conformations. Biochemistry 1998, 37, 1076-1082.
-
(1998)
Biochemistry
, vol.37
, pp. 1076-1082
-
-
Daughdrill, G.W.1
Hanely, L.J.2
Dahlquist, F.W.3
-
128
-
-
0030980926
-
The C-terminal half of the anti-sigma factor, flgm, becomes structured when bound to its target, sigma 28
-
Daughdrill, G. W.; Chadsey, M. S.; Karlinsey, J. E.; Hughes, K. T.; Dahlquist, F. W. The C-terminal half of the anti-sigma factor, flgm, becomes structured when bound to its target, sigma 28. Nat. Struct. Biol. 1997, 4, 285-291.
-
(1997)
Nat. Struct. Biol
, vol.4
, pp. 285-291
-
-
Daughdrill, G.W.1
Chadsey, M.S.2
Karlinsey, J.E.3
Hughes, K.T.4
Dahlquist, F.W.5
-
129
-
-
34548722169
-
Macromolecular crowding induces a molten globule state in the C-terminal domain of histone h1
-
Roque, A.; Ponte, I.; Suau, P. Macromolecular crowding induces a molten globule state in the C-terminal domain of histone h1. Biophys. J. 2007, 93, 2170-2177.
-
(2007)
Biophys. J
, vol.93
, pp. 2170-2177
-
-
Roque, A.1
Ponte, I.2
Suau, P.3
-
130
-
-
84898910986
-
Folding of an unfolded protein by macromolecular crowding in vitro
-
Aden, J.; Wittung-Stafshede, P. Folding of an unfolded protein by macromolecular crowding in vitro. Biochemistry 2014, 53, 2271-2277.
-
(2014)
Biochemistry
, vol.53
, pp. 2271-2277
-
-
Aden, J.1
Wittung-Stafshede, P.2
-
131
-
-
79951841821
-
Effects of macromolecular crowding on an intrinsically disordered protein characterized by small-angle neutron scattering with contrast matching
-
Johansen, D.; Jeffries, C. M.; Hammouda, B.; Trewhella, J.; Goldenberg, D. P. Effects of macromolecular crowding on an intrinsically disordered protein characterized by small-angle neutron scattering with contrast matching. Biophys. J. 2011, 100, 1120-1128.
-
(2011)
Biophys. J
, vol.100
, pp. 1120-1128
-
-
Johansen, D.1
Jeffries, C.M.2
Hammouda, B.3
Trewhella, J.4
Goldenberg, D.P.5
-
132
-
-
84894427113
-
Minimal effects of macromolecular crowding on an intrinsically disordered protein: A small-angle neutron scattering study
-
Goldenberg, D. P.; Argyle, B. Minimal effects of macromolecular crowding on an intrinsically disordered protein: A small-angle neutron scattering study. Biophys. J. 2014, 106, 905-914.
-
(2014)
Biophys. J
, vol.106
, pp. 905-914
-
-
Goldenberg, D.P.1
Argyle, B.2
-
133
-
-
84897513201
-
Single-molecule spectroscopy reveals polymer effects of disordered proteins in crowded environments
-
Soranno, A.; Koenig, I.; Borgia, M. B.; Hofmann, H.; Zosel, F.; Nettels, D.; Schuler, B. Single-molecule spectroscopy reveals polymer effects of disordered proteins in crowded environments. Proc. Natl. Acad. Sci. USA 2014, 111, 4874-4879.
-
(2014)
Proc. Natl. Acad. Sci. USA
, vol.111
, pp. 4874-4879
-
-
Soranno, A.1
Koenig, I.2
Borgia, M.B.3
Hofmann, H.4
Zosel, F.5
Nettels, D.6
Schuler, B.7
-
134
-
-
79955750874
-
Calcium-induced folding of intrinsically disordered repeat-in-toxin (rtx) motifs via changes of protein charges and oligomerization states
-
Sotomayor-Perez, A. C.; Ladant, D.; Chenal, A. Calcium-induced folding of intrinsically disordered repeat-in-toxin (rtx) motifs via changes of protein charges and oligomerization states. J. Biol. Chem. 2011, 286, 16997-17004.
-
(2011)
J. Biol. Chem
, vol.286
, pp. 16997-17004
-
-
Sotomayor-Perez, A.C.1
Ladant, D.2
Chenal, A.3
-
135
-
-
84882248932
-
Molecular crowding stabilizes both the intrinsically disordered calcium-free state and the folded calcium-bound state of a repeat in toxin (rtx) protein
-
Sotomayor-Perez, A. C.; Subrini, O.; Hessel, A.; Ladant, D.; Chenal, A. Molecular crowding stabilizes both the intrinsically disordered calcium-free state and the folded calcium-bound state of a repeat in toxin (rtx) protein. J. Am. Chem. Soc. 2013, 135, 11929-11934.
-
(2013)
J. Am. Chem. Soc
, vol.135
, pp. 11929-11934
-
-
Sotomayor-Perez, A.C.1
Subrini, O.2
Hessel, A.3
Ladant, D.4
Chenal, A.5
-
136
-
-
84870015758
-
Effects of molecular crowding on the dynamics of intrinsically disordered proteins
-
Cino, E. A.; Karttunen, M.; Choy, W. Y. Effects of molecular crowding on the dynamics of intrinsically disordered proteins. PLoS One 2012, 7, e49876.
-
(2012)
PLoS One
, vol.7
-
-
Cino, E.A.1
Karttunen, M.2
Choy, W.Y.3
-
137
-
-
0037077273
-
Crystal structure of lyme disease variable surface antigen vlse of borrelia burgdorferi
-
Eicken, C.; Sharma, V.; Klabunde, T.; Lawrenz, M. B.; Hardham, J. M.; Norris, S. J.; Sacchettini, J. C. Crystal structure of lyme disease variable surface antigen vlse of borrelia burgdorferi. J. Biol. Chem. 2002, 277, 21691-21696.
-
(2002)
J. Biol. Chem
, vol.277
, pp. 21691-21696
-
-
Eicken, C.1
Sharma, V.2
Klabunde, T.3
Lawrenz, M.B.4
Hardham, J.M.5
Norris, S.J.6
Sacchettini, J.C.7
-
138
-
-
0041624356
-
The largest protein observed to fold by two-state kinetic mechanism does not obey contact-order correlation
-
Jones, K.; Wittung-Stafshede, P. The largest protein observed to fold by two-state kinetic mechanism does not obey contact-order correlation. J. Am. Chem. Soc. 2003, 125, 9606-9607.
-
(2003)
J. Am. Chem. Soc
, vol.125
, pp. 9606-9607
-
-
Jones, K.1
Wittung-Stafshede, P.2
-
139
-
-
0035976777
-
Characterization of surface antigen from lyme disease spirochete borrelia burgdorferi
-
Jones, K.; Guidry, J.; Wittung-Stafshede, P. Characterization of surface antigen from lyme disease spirochete borrelia burgdorferi. Biochem. Biophys. Res. Commun. 2001, 289, 389-394.
-
(2001)
Biochem. Biophys. Res. Commun
, vol.289
, pp. 389-394
-
-
Jones, K.1
Guidry, J.2
Wittung-Stafshede, P.3
-
140
-
-
68349084565
-
Modulation of calmodulin plasticity by the effect of macromolecular crowding
-
Homouz, D.; Sanabria, H.; Waxham, M. N.; Cheung, M. S. Modulation of calmodulin plasticity by the effect of macromolecular crowding. J. Mol. Biol. 2009, 391, 933-943.
-
(2009)
J. Mol. Biol
, vol.391
, pp. 933-943
-
-
Homouz, D.1
Sanabria, H.2
Waxham, M.N.3
Cheung, M.S.4
-
141
-
-
79960962805
-
The effect of macromolecular crowding, ionic strength and calcium binding on calmodulin dynamics
-
Wang, Q.; Liang, K. C.; Czader, A.; Waxham, M. N.; Cheung, M. S. The effect of macromolecular crowding, ionic strength and calcium binding on calmodulin dynamics. PLoS Comput. Biol. 2011, 7, e1002114.
-
(2011)
PLoS Comput. Biol
, vol.7
-
-
Wang, Q.1
Liang, K.C.2
Czader, A.3
Waxham, M.N.4
Cheung, M.S.5
-
142
-
-
78049291945
-
Structure, function, and folding of phosphoglycerate kinase are strongly perturbed by macromolecular crowding
-
Dhar, A.; Samiotakis, A.; Ebbinghaus, S.; Nienhaus, L.; Homouz, D.; Gruebele, M.; Cheung, M. S. Structure, function, and folding of phosphoglycerate kinase are strongly perturbed by macromolecular crowding. Proc. Natl. Acad. Sci. USA 2010, 107, 17586-17591.
-
(2010)
Proc. Natl. Acad. Sci. USA
, vol.107
, pp. 17586-17591
-
-
Dhar, A.1
Samiotakis, A.2
Ebbinghaus, S.3
Nienhaus, L.4
Homouz, D.5
Gruebele, M.6
Cheung, M.S.7
-
143
-
-
56749155582
-
The effects of macromolecular crowding on the mechanical stability of protein molecules
-
Yuan, J. M.; Chyan, C. L.; Zhou, H. X.; Chung, T. Y.; Peng, H.; Ping, G.; Yang, G. The effects of macromolecular crowding on the mechanical stability of protein molecules. Protein Sci. 2008, 17, 2156-2166.
-
(2008)
Protein Sci
, vol.17
, pp. 2156-2166
-
-
Yuan, J.M.1
Chyan, C.L.2
Zhou, H.X.3
Chung, T.Y.4
Peng, H.5
Ping, G.6
Yang, G.7
-
144
-
-
77955249021
-
Factors defining effects of macromolecular crowding on protein stability: An in vitro/in silico case study using cytochrome c
-
Christiansen, A.; Wang, Q.; Samiotakis, A.; Cheung, M. S.; Wittung-Stafshede, P. Factors defining effects of macromolecular crowding on protein stability: An in vitro/in silico case study using cytochrome c. Biochemistry 2010, 49, 6519-6530.
-
(2010)
Biochemistry
, vol.49
, pp. 6519-6530
-
-
Christiansen, A.1
Wang, Q.2
Samiotakis, A.3
Cheung, M.S.4
Wittung-Stafshede, P.5
-
145
-
-
84904582414
-
Macromolecular crowding effects on two homologs of ribosomal protein s16: Protein-dependent structural changes and local interactions
-
Mikaelsson, T.; Aden, J.; Wittung-Stafshede, P.; Johansson, L. B. Macromolecular crowding effects on two homologs of ribosomal protein s16: Protein-dependent structural changes and local interactions. Biophys. J. 2014, 107, 401-410.
-
(2014)
Biophys. J
, vol.107
, pp. 401-410
-
-
Mikaelsson, T.1
Aden, J.2
Wittung-Stafshede, P.3
Johansson, L.B.4
-
146
-
-
55549084888
-
Macromolecular crowding compacts unfolded apoflavodoxin and causes severe aggregation of the off-pathway intermediate during apoflavodoxin folding
-
Engel, R.; Westphal, A. H.; Huberts, D. H.; Nabuurs, S. M.; Lindhoud, S.; Visser, A. J.; van Mierlo, C. P. Macromolecular crowding compacts unfolded apoflavodoxin and causes severe aggregation of the off-pathway intermediate during apoflavodoxin folding. J. Biol. Chem. 2008, 283, 27383-27394.
-
(2008)
J. Biol. Chem
, vol.283
, pp. 27383-27394
-
-
Engel, R.1
Westphal, A.H.2
Huberts, D.H.3
Nabuurs, S.M.4
Lindhoud, S.5
Visser, A.J.6
van Mierlo, C.P.7
-
147
-
-
84893395763
-
Denatured state structural property determines protein stabilization by macromolecular crowding: A thermodynamic and structural approach
-
Mittal, S.; Singh, L. R. Denatured state structural property determines protein stabilization by macromolecular crowding: A thermodynamic and structural approach. PLoS One 2013, 8, e78936.
-
(2013)
PLoS One
, vol.8
-
-
Mittal, S.1
Singh, L.R.2
-
148
-
-
77953145949
-
Effect of ficoll 70 on thermal stability and structure of creatine kinase
-
Wang, Y.; He, H.; Li, S. Effect of ficoll 70 on thermal stability and structure of creatine kinase. Biochemistry 2010, 75, 648-654.
-
(2010)
Biochemistry
, vol.75
, pp. 648-654
-
-
Wang, Y.1
He, H.2
Li, S.3
-
149
-
-
79953697415
-
Macromolecular crowding extended to a heptameric system: The co-chaperonin protein 10
-
Aguilar, X.; C, F. W.; Sparrman, T.; Wolf-Watz, M.; Wittung-Stafshede, P. Macromolecular crowding extended to a heptameric system: The co-chaperonin protein 10. Biochemistry 2011, 50, 3034-3044.
-
(2011)
Biochemistry
, vol.50
, pp. 3034-3044
-
-
Aguilar, X.C.F.W.1
Sparrman, T.2
Wolf-Watz, M.3
Wittung-Stafshede, P.4
-
150
-
-
84873081154
-
Inactivation of recombinant human brain-type creatine kinase during denaturation by guanidine hydrochloride in a macromolecular crowding system
-
Fan, Y. Q.; Liu, H. J.; Li, C.; Luan, Y. S.; Yang, J. M.; Wang, Y. L. Inactivation of recombinant human brain-type creatine kinase during denaturation by guanidine hydrochloride in a macromolecular crowding system. Appl. Biochem. Biotechnol. 2013, 169, 268-280.
-
(2013)
Appl. Biochem. Biotechnol
, vol.169
, pp. 268-280
-
-
Fan, Y.Q.1
Liu, H.J.2
Li, C.3
Luan, Y.S.4
Yang, J.M.5
Wang, Y.L.6
-
151
-
-
84873846865
-
Effect of molecular crowding on the temperature-pressure stability diagram of ribonuclease a
-
Zhai, Y.; Winter, R. Effect of molecular crowding on the temperature-pressure stability diagram of ribonuclease a. Chemphyschem 2013, 14, 386-393.
-
(2013)
Chemphyschem
, vol.14
, pp. 386-393
-
-
Zhai, Y.1
Winter, R.2
-
152
-
-
84896801641
-
Crowding effects on the temperature and pressure dependent structure, stability and folding kinetics of staphylococcal nuclease
-
Erlkamp, M.; Grobelny, S.; Winter, R. Crowding effects on the temperature and pressure dependent structure, stability and folding kinetics of staphylococcal nuclease. Phys. Chem. Chem. Phys. 2014, 16, 5965-5976.
-
(2014)
Phys. Chem. Chem. Phys
, vol.16
, pp. 5965-5976
-
-
Erlkamp, M.1
Grobelny, S.2
Winter, R.3
-
153
-
-
0033895234
-
Molecular mechanisms controlling actin filament dynamics in nonmuscle cells
-
Pollard, T. D.; Blanchoin, L.; Mullins, R. D. Molecular mechanisms controlling actin filament dynamics in nonmuscle cells. Annu. Rev. Biophys. Biomol. Struct. 2000, 29, 545-576.
-
(2000)
Annu. Rev. Biophys. Biomol. Struct
, vol.29
, pp. 545-576
-
-
Pollard, T.D.1
Blanchoin, L.2
Mullins, R.D.3
-
154
-
-
0015526770
-
Intrinsic fluorescence of actin
-
Lehrer, S. S.; Kerwar, G. Intrinsic fluorescence of actin. Biochemistry 1972, 11, 1211-1217.
-
(1972)
Biochemistry
, vol.11
, pp. 1211-1217
-
-
Lehrer, S.S.1
Kerwar, G.2
-
155
-
-
0016257885
-
Changes in conformation and nucleotide binding of ca, mn, or mgg-actin upon removal of the bound divalent cation. Studies of ultraviolet difference spectra and optical rotation
-
Strzelecka-Golaszewska, H.; Nagy, B.; Gergely, J. Changes in conformation and nucleotide binding of ca, mn, or mgg-actin upon removal of the bound divalent cation. Studies of ultraviolet difference spectra and optical rotation. Arch. Biochem. Biophys. 1974, 161, 559-569.
-
(1974)
Arch. Biochem. Biophys
, vol.161
, pp. 559-569
-
-
Strzelecka-Golaszewska, H.1
Nagy, B.2
Gergely, J.3
-
156
-
-
0021956963
-
Effects of various amino acid replacements on the conformational stability of g-actin
-
Strzelecka-Golaszewska, H.; Venyaminov, S.; Zmorzynski, S.; Mossakowska, M. Effects of various amino acid replacements on the conformational stability of g-actin. Eur. J. Biochem. 1985, 147, 331-342.
-
(1985)
Eur. J. Biochem
, vol.147
, pp. 331-342
-
-
Strzelecka-Golaszewska, H.1
Venyaminov, S.2
Zmorzynski, S.3
Mossakowska, M.4
-
157
-
-
0020828094
-
The influence of poly(ethylene glycol) 6000 on the properties of skeletal-muscle actin
-
Tellam, R. L.; Sculley, M. J.; Nichol, L. W.; Wills, P. R. The influence of poly(ethylene glycol) 6000 on the properties of skeletal-muscle actin. Biochem. J. 1983, 213, 651-659.
-
(1983)
Biochem. J
, vol.213
, pp. 651-659
-
-
Tellam, R.L.1
Sculley, M.J.2
Nichol, L.W.3
Wills, P.R.4
-
158
-
-
17044454299
-
Efficacy of macromolecular crowding in forcing proteins to fold
-
Qu, Y.; Bolen, D. W. Efficacy of macromolecular crowding in forcing proteins to fold. Biophys. Chem. 2002, 101-102, 155-165.
-
(2002)
Biophys. Chem
, pp. 155-165
-
-
Qu, Y.1
Bolen, D.W.2
-
159
-
-
0037470574
-
Effect of dextran on protein stability and conformation attributed to macromolecular crowding
-
Sasahara, K.; McPhie, P.; Minton, A. P. Effect of dextran on protein stability and conformation attributed to macromolecular crowding. J. Mol. Biol. 2003, 326, 1227-1237.
-
(2003)
J. Mol. Biol
, vol.326
, pp. 1227-1237
-
-
Sasahara, K.1
McPhie, P.2
Minton, A.P.3
-
160
-
-
33745909428
-
Macromolecular crowding stabilizes the molten globule form of apomyoglobin with respect to both cold and heat unfolding
-
McPhie, P.; Ni, Y. S.; Minton, A. P. Macromolecular crowding stabilizes the molten globule form of apomyoglobin with respect to both cold and heat unfolding. J. Mol. Biol. 2006, 361, 7-10.
-
(2006)
J. Mol. Biol
, vol.361
, pp. 7-10
-
-
McPhie, P.1
Ni, Y.S.2
Minton, A.P.3
-
161
-
-
37649016316
-
Molecular crowding enhances native structure and stability of alpha/beta protein flavodoxin
-
Stagg, L.; Zhang, S. Q.; Cheung, M. S.; Wittung-Stafshede, P. Molecular crowding enhances native structure and stability of alpha/beta protein flavodoxin. Proc. Natl. Acad. Sci. USA 2007, 104, 18976-18981.
-
(2007)
Proc. Natl. Acad. Sci. USA
, vol.104
, pp. 18976-18981
-
-
Stagg, L.1
Zhang, S.Q.2
Cheung, M.S.3
Wittung-Stafshede, P.4
-
162
-
-
35348851499
-
Macromolecular crowding increases structural content of folded proteins
-
Perham, M.; Stagg, L.; Wittung-Stafshede, P. Macromolecular crowding increases structural content of folded proteins. FEBS Lett. 2007, 581, 5065-5069.
-
(2007)
FEBS Lett
, vol.581
, pp. 5065-5069
-
-
Perham, M.1
Stagg, L.2
Wittung-Stafshede, P.3
-
163
-
-
44349088135
-
Residue-level interrogation of macromolecular crowding effects on protein stability
-
Charlton, L. M.; Barnes, C. O.; Li, C.; Orans, J.; Young, G. B.; Pielak, G. J. Residue-level interrogation of macromolecular crowding effects on protein stability. J. Am. Chem. Soc. 2008, 130, 6826-6830.
-
(2008)
J. Am. Chem. Soc
, vol.130
, pp. 6826-6830
-
-
Charlton, L.M.1
Barnes, C.O.2
Li, C.3
Orans, J.4
Young, G.B.5
Pielak, G.J.6
-
164
-
-
77955676884
-
Using nmr-detected backbone amide 1h exchange to assess macromolecular crowding effects on globular-protein stability
-
Miklos, A. C.; Li, C.; Pielak, G. J. Using nmr-detected backbone amide 1h exchange to assess macromolecular crowding effects on globular-protein stability. Methods Enzymol. 2009, 466, 1-18.
-
(2009)
Methods Enzymol
, vol.466
, pp. 1-18
-
-
Miklos, A.C.1
Li, C.2
Pielak, G.J.3
-
165
-
-
33645454904
-
15n NMR spin relaxation dispersion study of the molecular crowding effects on protein folding under native conditions
-
Ai, X.; Zhou, Z.; Bai, Y.; Choy, W. Y. 15n NMR spin relaxation dispersion study of the molecular crowding effects on protein folding under native conditions. J. Am. Chem. Soc. 2006, 128, 3916-3917.
-
(2006)
J. Am. Chem. Soc
, vol.128
, pp. 3916-3917
-
-
Ai, X.1
Zhou, Z.2
Bai, Y.3
Choy, W.Y.4
-
166
-
-
0035860681
-
Effects of macromolecular crowding on the refolding of glucose-6-phosphate dehydrogenase and protein disulfide isomerase
-
Li, J.; Zhang, S.; Wang, C. Effects of macromolecular crowding on the refolding of glucose-6-phosphate dehydrogenase and protein disulfide isomerase. J. Biol. Chem. 2001, 276, 34396-34401.
-
(2001)
J. Biol. Chem
, vol.276
, pp. 34396-34401
-
-
Li, J.1
Zhang, S.2
Wang, C.3
-
167
-
-
0034254189
-
Macromolecular crowding perturbs protein refolding kinetics: Implications for folding inside the cell
-
Van den Berg, B.; Wain, R.; Dobson, C. M.; Ellis, R. J. Macromolecular crowding perturbs protein refolding kinetics: Implications for folding inside the cell. EMBO J. 2000, 19, 3870-3875.
-
(2000)
EMBO J
, vol.19
, pp. 3870-3875
-
-
Van den Berg, B.1
Wain, R.2
Dobson, C.M.3
Ellis, R.J.4
-
168
-
-
1242338901
-
Loops, linkages, rings, catenanes, cages, and crowders: Entropy-based strategies for stabilizing proteins
-
Zhou, H. X. Loops, linkages, rings, catenanes, cages, and crowders: Entropy-based strategies for stabilizing proteins. Acc. Chem. Res. 2004, 37, 123-130.
-
(2004)
Acc. Chem. Res
, vol.37
, pp. 123-130
-
-
Zhou, H.X.1
-
169
-
-
16344389134
-
Molecular crowding enhances native state stability and refolding rates of globular proteins
-
Cheung, M. S.; Klimov, D.; Thirumalai, D. Molecular crowding enhances native state stability and refolding rates of globular proteins. Proc. Natl. Acad. Sci. USA 2005, 102, 4753-4758.
-
(2005)
Proc. Natl. Acad. Sci. USA
, vol.102
, pp. 4753-4758
-
-
Cheung, M.S.1
Klimov, D.2
Thirumalai, D.3
-
170
-
-
84873326077
-
Direct observation of protein unfolded state compaction in the presence of macromolecular crowding
-
Mikaelsson, T.; Aden, J.; Johansson, L. B.; Wittung-Stafshede, P. Direct observation of protein unfolded state compaction in the presence of macromolecular crowding. Biophys. J. 2013, 104, 694-704.
-
(2013)
Biophys. J
, vol.104
, pp. 694-704
-
-
Mikaelsson, T.1
Aden, J.2
Johansson, L.B.3
Wittung-Stafshede, P.4
-
171
-
-
0032921819
-
Upper limit of the time scale for diffusion and chain collapse in chymotrypsin inhibitor 2
-
Ladurner, A. G.; Fersht, A. R. Upper limit of the time scale for diffusion and chain collapse in chymotrypsin inhibitor 2. Nat. Struct. Biol. 1999, 6, 28-31.
-
(1999)
Nat. Struct. Biol
, vol.6
, pp. 28-31
-
-
Ladurner, A.G.1
Fersht, A.R.2
-
172
-
-
11244296161
-
Mixed macromolecular crowding accelerates the oxidative refolding of reduced, denatured lysozyme: Implications for protein folding in intracellular environments
-
Zhou, B. R.; Liang, Y.; Du, F.; Zhou, Z.; Chen, J. Mixed macromolecular crowding accelerates the oxidative refolding of reduced, denatured lysozyme: Implications for protein folding in intracellular environments. J. Biol. Chem. 2004, 279, 55109-55116.
-
(2004)
J. Biol. Chem
, vol.279
, pp. 55109-55116
-
-
Zhou, B.R.1
Liang, Y.2
Du, F.3
Zhou, Z.4
Chen, J.5
-
173
-
-
70349232202
-
Effect of macromolecular crowding on protein folding dynamics at the secondary structure level
-
Mukherjee, S.; Waegele, M. M.; Chowdhury, P.; Guo, L.; Gai, F. Effect of macromolecular crowding on protein folding dynamics at the secondary structure level. J. Mol. Biol. 2009, 393, 227-236.
-
(2009)
J. Mol. Biol
, vol.393
, pp. 227-236
-
-
Mukherjee, S.1
Waegele, M.M.2
Chowdhury, P.3
Guo, L.4
Gai, F.5
-
174
-
-
0035847097
-
Excluded volume effects on the refolding and assembly of an oligomeric protein. Groel, a case study
-
Galan, A.; Sot, B.; Llorca, O.; Carrascosa, J. L.; Valpuesta, J. M.; Muga, A. Excluded volume effects on the refolding and assembly of an oligomeric protein. Groel, a case study. J. Biol. Chem. 2001, 276, 957-964.
-
(2001)
J. Biol. Chem
, vol.276
, pp. 957-964
-
-
Galan, A.1
Sot, B.2
Llorca, O.3
Carrascosa, J.L.4
Valpuesta, J.M.5
Muga, A.6
-
175
-
-
0037117720
-
Requirement for groel/groes-dependent protein folding under nonpermissive conditions of macromolecular crowding
-
Martin, J. Requirement for groel/groes-dependent protein folding under nonpermissive conditions of macromolecular crowding. Biochemistry 2002, 41, 5050-5055.
-
(2002)
Biochemistry
, vol.41
, pp. 5050-5055
-
-
Martin, J.1
-
176
-
-
0345602004
-
Effects of macromolecular crowding on the unfolding and the refolding of d-glyceraldehyde-3-phosophospate dehydrogenase
-
Ren, G.; Lin, Z.; Tsou, C. L.; Wang, C. C. Effects of macromolecular crowding on the unfolding and the refolding of d-glyceraldehyde-3-phosophospate dehydrogenase. J. Protein Chem. 2003, 22, 431-439.
-
(2003)
J. Protein Chem
, vol.22
, pp. 431-439
-
-
Ren, G.1
Lin, Z.2
Tsou, C.L.3
Wang, C.C.4
-
177
-
-
77955044557
-
Macromolecular crowding remodels the energy landscape of a protein by favoring a more compact unfolded state
-
Hong, J.; Gierasch, L. M. Macromolecular crowding remodels the energy landscape of a protein by favoring a more compact unfolded state. J. Am. Chem. Soc. 2010, 132, 10445-10452.
-
(2010)
J. Am. Chem. Soc
, vol.132
, pp. 10445-10452
-
-
Hong, J.1
Gierasch, L.M.2
-
178
-
-
84885155721
-
Quantification of excluded volume effects on the folding landscape of pseudomonas aeruginosa apoazurin in vitro
-
Christiansen, A.; Wittung-Stafshede, P. Quantification of excluded volume effects on the folding landscape of pseudomonas aeruginosa apoazurin in vitro. Biophys. J. 2013, 105, 1689-1699.
-
(2013)
Biophys. J
, vol.105
, pp. 1689-1699
-
-
Christiansen, A.1
Wittung-Stafshede, P.2
-
179
-
-
84870883706
-
Effects of macromolecular crowding on burst phase kinetics of cytochrome c folding
-
Chen, E.; Christiansen, A.; Wang, Q.; Cheung, M. S.; Kliger, D. S.; Wittung-Stafshede, P. Effects of macromolecular crowding on burst phase kinetics of cytochrome c folding. Biochemistry 2012, 51, 9836-9845.
-
(2012)
Biochemistry
, vol.51
, pp. 9836-9845
-
-
Chen, E.1
Christiansen, A.2
Wang, Q.3
Cheung, M.S.4
Kliger, D.S.5
Wittung-Stafshede, P.6
-
180
-
-
79851504498
-
Macromolecular crowding tunes folding landscape of parallel alpha/beta protein, apoflavodoxin
-
Stagg, L.; Christiansen, A.; Wittung-Stafshede, P. Macromolecular crowding tunes folding landscape of parallel alpha/beta protein, apoflavodoxin. J. Am. Chem. Soc. 2011, 133, 646-648.
-
(2011)
J. Am. Chem. Soc
, vol.133
, pp. 646-648
-
-
Stagg, L.1
Christiansen, A.2
Wittung-Stafshede, P.3
-
181
-
-
74649084057
-
Residue-specific analysis of frustration in the folding landscape of repeat beta/alpha protein apoflavodoxin
-
Stagg, L.; Samiotakis, A.; Homouz, D.; Cheung, M. S.; Wittung-Stafshede, P. Residue-specific analysis of frustration in the folding landscape of repeat beta/alpha protein apoflavodoxin. J. Mol. Biol. 2010, 396, 75-89.
-
(2010)
J. Mol. Biol
, vol.396
, pp. 75-89
-
-
Stagg, L.1
Samiotakis, A.2
Homouz, D.3
Cheung, M.S.4
Wittung-Stafshede, P.5
-
182
-
-
58849112212
-
Macromolecular crowding modulates folding mechanism of alpha/beta protein apoflavodoxin
-
Homouz, D.; Stagg, L.; Wittung-Stafshede, P.; Cheung, M. S. Macromolecular crowding modulates folding mechanism of alpha/beta protein apoflavodoxin. Biophys. J. 2009, 96, 671-680.
-
(2009)
Biophys. J
, vol.96
, pp. 671-680
-
-
Homouz, D.1
Stagg, L.2
Wittung-Stafshede, P.3
Cheung, M.S.4
-
183
-
-
79957787217
-
Macromolecular crowding fails to fold a globular protein in cells
-
Schlesinger, A. P.; Wang, Y.; Tadeo, X.; Millet, O.; Pielak, G. J. Macromolecular crowding fails to fold a globular protein in cells. J. Am. Chem. Soc. 2011, 133, 8082-8085.
-
(2011)
J. Am. Chem. Soc
, vol.133
, pp. 8082-8085
-
-
Schlesinger, A.P.1
Wang, Y.2
Tadeo, X.3
Millet, O.4
Pielak, G.J.5
-
184
-
-
84874084196
-
Effect of crowding by ficolls on ompa and ompt refolding and membrane insertion
-
Ye, C.; Chai, Q.; Zhong, M.; Wei, Y. Effect of crowding by ficolls on ompa and ompt refolding and membrane insertion. Protein Sci. 2013, 22, 239-245.
-
(2013)
Protein Sci
, vol.22
, pp. 239-245
-
-
Ye, C.1
Chai, Q.2
Zhong, M.3
Wei, Y.4
-
185
-
-
0023758314
-
Effects of macromolecular crowding on the association of E. coli ribosomal particles
-
Zimmerman, S. B.; Trach, S. O. Effects of macromolecular crowding on the association of E. coli ribosomal particles. Nucleic Acids Res. 1988, 16, 6309-6326.
-
(1988)
Nucleic Acids Res
, vol.16
, pp. 6309-6326
-
-
Zimmerman, S.B.1
Trach, S.O.2
-
186
-
-
0029887968
-
Substrate modulation of aldolase b binding in hepatocytes
-
Agius, L. Substrate modulation of aldolase b binding in hepatocytes. Biochem. J. 1996, 315, 651-658.
-
(1996)
Biochem. J
, vol.315
, pp. 651-658
-
-
Agius, L.1
-
187
-
-
0033368485
-
Binding of rat brain hexokinase to recombinant yeast mitochondria: Identification of necessary molecular determinants
-
Azoulay-Zohar, H.; Aflalo, C. Binding of rat brain hexokinase to recombinant yeast mitochondria: Identification of necessary molecular determinants. J. Bioenerg. Biomembr. 1999, 31, 569-579.
-
(1999)
J. Bioenerg. Biomembr
, vol.31
, pp. 569-579
-
-
Azoulay-Zohar, H.1
Aflalo, C.2
-
188
-
-
0034127582
-
Binding of rat brain hexokinase to recombinant yeast mitochondria: Identification of necessary physico-chemical determinants
-
Azoulay-Zohar, H.; Aflalo, C. Binding of rat brain hexokinase to recombinant yeast mitochondria: Identification of necessary physico-chemical determinants. Eur. J. Biochem. 2000, 267, 2973-2980.
-
(2000)
Eur. J. Biochem
, vol.267
, pp. 2973-2980
-
-
Azoulay-Zohar, H.1
Aflalo, C.2
-
189
-
-
84908287055
-
Intracellular crowding effects on the self-association of the bacterial cell division protein ftsz
-
Naddaf, L.; Sayyed-Ahmad, A. Intracellular crowding effects on the self-association of the bacterial cell division protein ftsz. Arch. Biochem. Biophys. 2014, 564, 12-19.
-
(2014)
Arch. Biochem. Biophys
, vol.564
, pp. 12-19
-
-
Naddaf, L.1
Sayyed-Ahmad, A.2
-
190
-
-
0035853141
-
Direct observation of the enhancement of noncooperative protein self-assembly by macromolecular crowding: Indefinite linear self-association of bacterial cell division protein FTSZ
-
Rivas, G.; Fernandez, J. A.; Minton, A. P. Direct observation of the enhancement of noncooperative protein self-assembly by macromolecular crowding: Indefinite linear self-association of bacterial cell division protein FTSZ. Proc. Natl. Acad. Sci. USA 2001, 98, 3150-3155.
-
(2001)
Proc. Natl. Acad. Sci. USA
, vol.98
, pp. 3150-3155
-
-
Rivas, G.1
Fernandez, J.A.2
Minton, A.P.3
-
191
-
-
0242584670
-
Essential cell division protein ftsz assembles into one monomer-thick ribbons under conditions resembling the crowded intracellular environment
-
Gonzalez, J. M.; Jimenez, M.; Velez, M.; Mingorance, J.; Andreu, J. M.; Vicente, M.; Rivas, G. Essential cell division protein ftsz assembles into one monomer-thick ribbons under conditions resembling the crowded intracellular environment. J. Biol. Chem. 2003, 278, 37664-37671.
-
(2003)
J. Biol. Chem
, vol.278
, pp. 37664-37671
-
-
Gonzalez, J.M.1
Jimenez, M.2
Velez, M.3
Mingorance, J.4
Andreu, J.M.5
Vicente, M.6
Rivas, G.7
-
192
-
-
0142122965
-
Manipulating the reversible aggregation of protein hormones in secretory granules: Potential impact on biopharmaceutical development
-
Dannies, P. Manipulating the reversible aggregation of protein hormones in secretory granules: Potential impact on biopharmaceutical development. BioDrugs 2003, 17, 315-324.
-
(2003)
BioDrugs
, vol.17
, pp. 315-324
-
-
Dannies, P.1
-
193
-
-
27644552564
-
Effect of macromolecular crowding agents on human immunodeficiency virus type 1 capsid protein assembly in vitro
-
Del Alamo, M.; Rivas, G.; Mateu, M. G. Effect of macromolecular crowding agents on human immunodeficiency virus type 1 capsid protein assembly in vitro. J. Virol. 2005, 79, 14271-14281.
-
(2005)
J. Virol
, vol.79
, pp. 14271-14281
-
-
Del Alamo, M.1
Rivas, G.2
Mateu, M.G.3
-
194
-
-
33947543541
-
Plant transformation by agrobacterium tumefaciens: Modulation of single-stranded DNA-vire2 complex assembly by vire1
-
Frenkiel-Krispin, D.; Wolf, S. G.; Albeck, S.; Unger, T.; Peleg, Y.; Jacobovitch, J.; Michael, Y.; Daube, S.; Sharon, M.; Robinson, C. V.; et al. Plant transformation by agrobacterium tumefaciens: Modulation of single-stranded DNA-vire2 complex assembly by vire1. J. Biol. Chem. 2007, 282, 3458-3464.
-
(2007)
J. Biol. Chem
, vol.282
, pp. 3458-3464
-
-
Frenkiel-Krispin, D.1
Wolf, S.G.2
Albeck, S.3
Unger, T.4
Peleg, Y.5
Jacobovitch, J.6
Michael, Y.7
Daube, S.8
Sharon, M.9
Robinson, C.V.10
-
195
-
-
33751090123
-
Early events in the binding of the pps10 replication protein repa to single iteron and operator DNA sequences
-
Diaz-Lopez, T.; Davila-Fajardo, C.; Blaesing, F.; Lillo, M. P.; Giraldo, R. Early events in the binding of the pps10 replication protein repa to single iteron and operator DNA sequences. J. Mol. Biol. 2006, 364, 909-920.
-
(2006)
J. Mol. Biol
, vol.364
, pp. 909-920
-
-
Diaz-Lopez, T.1
Davila-Fajardo, C.2
Blaesing, F.3
Lillo, M.P.4
Giraldo, R.5
-
196
-
-
33748665734
-
Macromolecular crowding enhances the binding of superoxide dismutase to xanthine oxidase: Implications for protein-protein interactions in intracellular environments
-
Zhou, Y. L.; Liao, J. M.; Chen, J.; Liang, Y. Macromolecular crowding enhances the binding of superoxide dismutase to xanthine oxidase: Implications for protein-protein interactions in intracellular environments. Int. J. Biochem. Cell Biol. 2006, 38, 1986-1994.
-
(2006)
Int. J. Biochem. Cell Biol
, vol.38
, pp. 1986-1994
-
-
Zhou, Y.L.1
Liao, J.M.2
Chen, J.3
Liang, Y.4
-
197
-
-
45849101224
-
Self-association of polynucleosome chains by macromolecular crowding
-
Hancock, R. Self-association of polynucleosome chains by macromolecular crowding. Eur. Biophys. J. 2008, 37, 1059-1064.
-
(2008)
Eur. Biophys. J
, vol.37
, pp. 1059-1064
-
-
Hancock, R.1
-
198
-
-
58549087915
-
Analytical ultracentrifugation studies of phage phi29 protein p6 binding to DNA
-
Alcorlo, M.; Jimenez, M.; Ortega, A.; Hermoso, J. M.; Salas, M.; Minton, A. P.; Rivas, G. Analytical ultracentrifugation studies of phage phi29 protein p6 binding to DNA. J. Mol. Biol. 2009, 385, 1616-1629.
-
(2009)
J. Mol. Biol
, vol.385
, pp. 1616-1629
-
-
Alcorlo, M.1
Jimenez, M.2
Ortega, A.3
Hermoso, J.M.4
Salas, M.5
Minton, A.P.6
Rivas, G.7
-
199
-
-
77949512721
-
Crowding effects on association reactions at membranes
-
Kim, J. S.; Yethiraj, A. Crowding effects on association reactions at membranes. Biophys. J. 2010, 98, 951-958.
-
(2010)
Biophys. J
, vol.98
, pp. 951-958
-
-
Kim, J.S.1
Yethiraj, A.2
-
200
-
-
77956645458
-
Macromolecular crowding converts the human recombinant PRPC to the soluble neurotoxic beta-oligomers
-
Huang, L.; Jin, R.; Li, J.; Luo, K.; Huang, T.; Wu, D.; Wang, W.; Chen, R.; Xiao, G. Macromolecular crowding converts the human recombinant PRPC to the soluble neurotoxic beta-oligomers. FASEB J. 2010, 24, 3536-3543.
-
(2010)
FASEB J
, vol.24
, pp. 3536-3543
-
-
Huang, L.1
Jin, R.2
Li, J.3
Luo, K.4
Huang, T.5
Wu, D.6
Wang, W.7
Chen, R.8
Xiao, G.9
-
201
-
-
22144435939
-
Protein self-association induced by macromolecular crowding: A quantitative analysis by magnetic relaxation dispersion
-
Snoussi, K.; Halle, B. Protein self-association induced by macromolecular crowding: A quantitative analysis by magnetic relaxation dispersion. Biophys. J. 2005, 88, 2855-2866.
-
(2005)
Biophys. J
, vol.88
, pp. 2855-2866
-
-
Snoussi, K.1
Halle, B.2
-
202
-
-
0019890347
-
Evidence for protein self-association induced by excluded volume. Myoglobin in the presence of globular proteins
-
Wilf, J.; Minton, A. P. Evidence for protein self-association induced by excluded volume. Myoglobin in the presence of globular proteins. Biochim. Biophys. Acta 1981, 670, 316-322.
-
(1981)
Biochim. Biophys. Acta
, vol.670
, pp. 316-322
-
-
Wilf, J.1
Minton, A.P.2
-
203
-
-
0033525688
-
Polymer structure and solubility of deoxyhemoglobin s in the presence of high concentrations of volume-excluding 70-kda dextran. Effects of non-S hemoglobins and inhibitors
-
Bookchin, R. M.; Balazs, T.; Wang, Z.; Josephs, R.; Lew, V. L. Polymer structure and solubility of deoxyhemoglobin s in the presence of high concentrations of volume-excluding 70-kda dextran. Effects of non-S hemoglobins and inhibitors. J. Biol. Chem. 1999, 274, 6689-6697.
-
(1999)
J. Biol. Chem
, vol.274
, pp. 6689-6697
-
-
Bookchin, R.M.1
Balazs, T.2
Wang, Z.3
Josephs, R.4
Lew, V.L.5
-
204
-
-
0030981013
-
Macromolecular crowding: Effects on actin polymerisation
-
Lindner, R. A.; Ralston, G. B. Macromolecular crowding: Effects on actin polymerisation. Biophys. Chem. 1997, 66, 57-66.
-
(1997)
Biophys. Chem
, vol.66
, pp. 57-66
-
-
Lindner, R.A.1
Ralston, G.B.2
-
205
-
-
78650080825
-
Macromolecular crowding effects on protein-protein binding affinity and specificity
-
Kim, Y. C.; Best, R. B.; Mittal, J. Macromolecular crowding effects on protein-protein binding affinity and specificity. J. Chem. Phys. 2010, 133, 205101.
-
(2010)
J. Chem. Phys
, vol.133
-
-
Kim, Y.C.1
Best, R.B.2
Mittal, J.3
-
206
-
-
68949143016
-
Common crowding agents have only a small effect on protein-protein interactions
-
Phillip, Y.; Sherman, E.; Haran, G.; Schreiber, G. Common crowding agents have only a small effect on protein-protein interactions. Biophys. J. 2009, 97, 875-885.
-
(2009)
Biophys. J
, vol.97
, pp. 875-885
-
-
Phillip, Y.1
Sherman, E.2
Haran, G.3
Schreiber, G.4
-
207
-
-
84899657388
-
Filament formation by metabolic enzymes is a specific adaptation to an advanced state of cellular starvation
-
Petrovska, I.; Nuske, E.; Munder, M. C.; Kulasegaran, G.; Malinovska, L.; Kroschwald, S.; Richter, D.; Fahmy, K.; Gibson, K.; Verbavatz, J. M.; et al. Filament formation by metabolic enzymes is a specific adaptation to an advanced state of cellular starvation. eLife 2014, doi: 10. 7554/eLife. 02409.
-
(2014)
Elife
-
-
Petrovska, I.1
Nuske, E.2
Munder, M.C.3
Kulasegaran, G.4
Malinovska, L.5
Kroschwald, S.6
Richter, D.7
Fahmy, K.8
Gibson, K.9
Verbavatz, J.M.10
-
208
-
-
0024992188
-
"Macromolecular crowding": Thermodynamic consequences for protein-protein interactions within the t4 DNA replication complex
-
Jarvis, T. C.; Ring, D. M.; Daube, S. S.; von Hippel, P. H. "Macromolecular crowding": Thermodynamic consequences for protein-protein interactions within the t4 DNA replication complex. J. Biol. Chem. 1990, 265, 15160-15167.
-
(1990)
J. Biol. Chem
, vol.265
, pp. 15160-15167
-
-
Jarvis, T.C.1
Ring, D.M.2
Daube, S.S.3
von Hippel, P.H.4
-
209
-
-
0027469983
-
Assembly of a functional replication complex without atp hydrolysis: A direct interaction of bacteriophage t4 gp45 with t4 DNA polymerase
-
Reddy, M. K.; Weitzel, S. E.; von Hippel, P. H. Assembly of a functional replication complex without atp hydrolysis: A direct interaction of bacteriophage t4 gp45 with t4 DNA polymerase. Proc. Natl. Acad. Sci. USA 1993, 90, 3211-3215.
-
(1993)
Proc. Natl. Acad. Sci. USA
, vol.90
, pp. 3211-3215
-
-
Reddy, M.K.1
Weitzel, S.E.2
von Hippel, P.H.3
-
210
-
-
0027981341
-
Use of a macromolecular crowding agent to dissect interactions and define functions in transcriptional activation by a DNA-tracking protein: Bacteriophage t4 gene 45 protein and late transcription
-
Sanders, G. M.; Kassavetis, G. A.; Geiduschek, E. P. Use of a macromolecular crowding agent to dissect interactions and define functions in transcriptional activation by a DNA-tracking protein: Bacteriophage t4 gene 45 protein and late transcription. Proc. Natl. Acad. Sci. USA 1994, 91, 7703-7707.
-
(1994)
Proc. Natl. Acad. Sci. USA
, vol.91
, pp. 7703-7707
-
-
Sanders, G.M.1
Kassavetis, G.A.2
Geiduschek, E.P.3
-
211
-
-
0028894966
-
Using macromolecular crowding agents to identify weak interactions within DNA replication complexes
-
Reddy, M. K.; Weitzel, S. E.; Daube, S. S.; Jarvis, T. C.; von Hippel, P. H. Using macromolecular crowding agents to identify weak interactions within DNA replication complexes. Methods Enzymol. 1995, 262, 466-476.
-
(1995)
Methods Enzymol
, vol.262
, pp. 466-476
-
-
Reddy, M.K.1
Weitzel, S.E.2
Daube, S.S.3
Jarvis, T.C.4
von Hippel, P.H.5
-
212
-
-
0024325630
-
Enhancement of bacteriophage t4 late transcription by components of the t4 DNA replication apparatus
-
Herendeen, D. R.; Kassavetis, G. A.; Barry, J.; Alberts, B. M.; Geiduschek, E. P. Enhancement of bacteriophage t4 late transcription by components of the t4 DNA replication apparatus. Science 1989, 245, 952-958.
-
(1989)
Science
, vol.245
, pp. 952-958
-
-
Herendeen, D.R.1
Kassavetis, G.A.2
Barry, J.3
Alberts, B.M.4
Geiduschek, E.P.5
-
213
-
-
0025291710
-
An RNA polymerase-binding protein that is required for communication between an enhancer and a promoter
-
Herendeen, D. R.; Williams, K. P.; Kassavetis, G. A.; Geiduschek, E. P. An RNA polymerase-binding protein that is required for communication between an enhancer and a promoter. Science 1990, 248, 573-578.
-
(1990)
Science
, vol.248
, pp. 573-578
-
-
Herendeen, D.R.1
Williams, K.P.2
Kassavetis, G.A.3
Geiduschek, E.P.4
-
214
-
-
0026752261
-
A transcriptional enhancer whose function imposes a requirement that proteins track along DNA
-
Herendeen, D. R.; Kassavetis, G. A.; Geiduschek, E. P. A transcriptional enhancer whose function imposes a requirement that proteins track along DNA. Science 1992, 256, 1298-1303.
-
(1992)
Science
, vol.256
, pp. 1298-1303
-
-
Herendeen, D.R.1
Kassavetis, G.A.2
Geiduschek, E.P.3
-
215
-
-
0029737407
-
Dynamics of DNA-tracking by two sliding-clamp proteins
-
Fu, T. J.; Sanders, G. M.; O'Donnell, M.; Geiduschek, E. P. Dynamics of DNA-tracking by two sliding-clamp proteins. EMBO J. 1996, 15, 4414-4422.
-
(1996)
EMBO J
, vol.15
, pp. 4414-4422
-
-
Fu, T.J.1
Sanders, G.M.2
O'Donnell, M.3
Geiduschek, E.P.4
-
216
-
-
0024316210
-
Osmoelastic coupling in biological structures: Formation of parallel bundles of actin filaments in a crystalline-like structure caused by osmotic stress
-
Suzuki, A.; Yamazaki, M.; Ito, T. Osmoelastic coupling in biological structures: Formation of parallel bundles of actin filaments in a crystalline-like structure caused by osmotic stress. Biochemistry 1989, 28, 6513-6518.
-
(1989)
Biochemistry
, vol.28
, pp. 6513-6518
-
-
Suzuki, A.1
Yamazaki, M.2
Ito, T.3
-
217
-
-
0024388098
-
The influence of molecular crowding on the binding of glycolytic enzymes to cytoskeletal structure
-
Shearwin, K.; Nanhua, C.; Masters, C. The influence of molecular crowding on the binding of glycolytic enzymes to cytoskeletal structure. Biochem. Int. 1989, 19, 723-729.
-
(1989)
Biochem. Int
, vol.19
, pp. 723-729
-
-
Shearwin, K.1
Nanhua, C.2
Masters, C.3
-
218
-
-
0025353332
-
Interactions between glycolytic enzymes and cytoskeletal structure-The influence of ionic strength and molecular crowding
-
Shearwin, K.; Nanhua, C.; Masters, C. Interactions between glycolytic enzymes and cytoskeletal structure-The influence of ionic strength and molecular crowding. Biochem. Int. 1990, 21, 53-60.
-
(1990)
Biochem. Int
, vol.21
, pp. 53-60
-
-
Shearwin, K.1
Nanhua, C.2
Masters, C.3
-
219
-
-
0026541125
-
"macromolecular crowding" is a primary factor in the organization of the cytoskeleton
-
Cuneo, P.; Magri, E.; Verzola, A.; Grazi, E. "macromolecular crowding" is a primary factor in the organization of the cytoskeleton. Biochem. J. 1992, 281, 507-512.
-
(1992)
Biochem. J
, vol.281
, pp. 507-512
-
-
Cuneo, P.1
Magri, E.2
Verzola, A.3
Grazi, E.4
-
220
-
-
0028133490
-
Cytoskeleton, motile structures and macromolecular crowding
-
Grazi, E. Cytoskeleton, motile structures and macromolecular crowding. Adv. Exp. Med. Biol. 1994, 358, 123-130.
-
(1994)
Adv. Exp. Med. Biol
, vol.358
, pp. 123-130
-
-
Grazi, E.1
-
221
-
-
84908222734
-
Tuning the architecture of three-dimensional collagen hydrogels by physiological macromolecular crowding
-
Dewavrin, J. Y.; Hamzavi, N.; Shim, V. P.; Raghunath, M. Tuning the architecture of three-dimensional collagen hydrogels by physiological macromolecular crowding. Acta Biomater. 2014, 10, 4351-4359.
-
(2014)
Acta Biomater
, vol.10
, pp. 4351-4359
-
-
Dewavrin, J.Y.1
Hamzavi, N.2
Shim, V.P.3
Raghunath, M.4
-
222
-
-
0026448778
-
Model for the role of macromolecular crowding in regulation of cellular volume
-
Minton, A. P.; Colclasure, G. C.; Parker, J. C. Model for the role of macromolecular crowding in regulation of cellular volume. Proc. Natl. Acad. Sci. USA 1992, 89, 10504-10506.
-
(1992)
Proc. Natl. Acad. Sci. USA
, vol.89
, pp. 10504-10506
-
-
Minton, A.P.1
Colclasure, G.C.2
Parker, J.C.3
-
223
-
-
0029025457
-
Effects of macromolecular crowding on nuclear size
-
Rosania, G. R.; Swanson, J. A. Effects of macromolecular crowding on nuclear size. Exp. Cell Res. 1995, 218, 114-122.
-
(1995)
Exp. Cell Res
, vol.218
, pp. 114-122
-
-
Rosania, G.R.1
Swanson, J.A.2
-
224
-
-
79551676332
-
Effects of macromolecular crowding on the inhibition of virus assembly and virus-cell receptor recognition
-
Rincon, V.; Bocanegra, R.; Rodriguez-Huete, A.; Rivas, G.; Mateu, M. G. Effects of macromolecular crowding on the inhibition of virus assembly and virus-cell receptor recognition. Biophys. J. 2011, 100, 738-746.
-
(2011)
Biophys. J
, vol.100
, pp. 738-746
-
-
Rincon, V.1
Bocanegra, R.2
Rodriguez-Huete, A.3
Rivas, G.4
Mateu, M.G.5
-
225
-
-
84893364894
-
Phase transitions and size scaling of membrane-less organelles
-
Brangwynne, C. P. Phase transitions and size scaling of membrane-less organelles. J. Cell Biol. 2013, 203, 875-881.
-
(2013)
J. Cell Biol
, vol.203
, pp. 875-881
-
-
Brangwynne, C.P.1
-
226
-
-
0033925534
-
Review: Properties and assembly mechanisms of nd10, pml bodies, or pods
-
Maul, G. G.; Negorev, D.; Bell, P.; Ishov, A. M. Review: Properties and assembly mechanisms of nd10, pml bodies, or pods. J. Struct. Biol. 2000, 129, 278-287.
-
(2000)
J. Struct. Biol
, vol.129
, pp. 278-287
-
-
Maul, G.G.1
Negorev, D.2
Bell, P.3
Ishov, A.M.4
-
227
-
-
0033925532
-
Review: Perinucleolar structures
-
Huang, S. Review: Perinucleolar structures. J. Struct. Biol. 2000, 129, 233-240.
-
(2000)
J. Struct. Biol
, vol.129
, pp. 233-240
-
-
Huang, S.1
-
228
-
-
0037039475
-
Paraspeckles: A novel nuclear domain
-
Fox, A. H.; Lam, Y. W.; Leung, A. K.; Lyon, C. E.; Andersen, J.; Mann, M.; Lamond, A. I. Paraspeckles: A novel nuclear domain. Curr. Biol. 2002, 12, 13-25.
-
(2002)
Curr. Biol
, vol.12
, pp. 13-25
-
-
Fox, A.H.1
Lam, Y.W.2
Leung, A.K.3
Lyon, C.E.4
Andersen, J.5
Mann, M.6
Lamond, A.I.7
-
229
-
-
0041669439
-
Nuclear speckles: A model for nuclear organelles
-
Lamond, A. I.; Spector, D. L. Nuclear speckles: A model for nuclear organelles. Nat. Rev. Mol. Cell Biol. 2003, 4, 605-612.
-
(2003)
Nat. Rev. Mol. Cell Biol
, vol.4
, pp. 605-612
-
-
Lamond, A.I.1
Spector, D.L.2
-
230
-
-
18244366043
-
Dynamic sorting of nuclear components into distinct nucleolar caps during transcriptional inhibition
-
Shav-Tal, Y.; Blechman, J.; Darzacq, X.; Montagna, C.; Dye, B. T.; Patton, J. G.; Singer, R. H.; Zipori, D. Dynamic sorting of nuclear components into distinct nucleolar caps during transcriptional inhibition. Mol. Biol. Cell 2005, 16, 2395-2413.
-
(2005)
Mol. Biol. Cell
, vol.16
, pp. 2395-2413
-
-
Shav-Tal, Y.1
Blechman, J.2
Darzacq, X.3
Montagna, C.4
Dye, B.T.5
Patton, J.G.6
Singer, R.H.7
Zipori, D.8
-
231
-
-
35948951960
-
Edc3p and a glutamine/asparagine-rich domain of lsm4p function in processing body assembly in saccharomyces cerevisiae
-
Decker, C. J.; Teixeira, D.; Parker, R. Edc3p and a glutamine/asparagine-rich domain of lsm4p function in processing body assembly in saccharomyces cerevisiae. J. Cell Biol. 2007, 179, 437-449.
-
(2007)
J. Cell Biol
, vol.179
, pp. 437-449
-
-
Decker, C.J.1
Teixeira, D.2
Parker, R.3
-
232
-
-
67649976463
-
Germline p granules are liquid droplets that localize by controlled dissolution/condensation
-
Brangwynne, C. P.; Eckmann, C. R.; Courson, D. S.; Rybarska, A.; Hoege, C.; Gharakhani, J.; Julicher, F.; Hyman, A. A. Germline p granules are liquid droplets that localize by controlled dissolution/condensation. Science 2009, 324, 1729-1732.
-
(2009)
Science
, vol.324
, pp. 1729-1732
-
-
Brangwynne, C.P.1
Eckmann, C.R.2
Courson, D.S.3
Rybarska, A.4
Hoege, C.5
Gharakhani, J.6
Julicher, F.7
Hyman, A.A.8
-
233
-
-
67349232822
-
Ultrastructural characterization of spermatogenesis and its evolutionary conservation in the germline: Germinal granules in mammals
-
Chuma, S.; Hosokawa, M.; Tanaka, T.; Nakatsuji, N. Ultrastructural characterization of spermatogenesis and its evolutionary conservation in the germline: Germinal granules in mammals. Mol. Cell. Endocrinol. 2009, 306, 17-23.
-
(2009)
Mol. Cell. Endocrinol
, vol.306
, pp. 17-23
-
-
Chuma, S.1
Hosokawa, M.2
Tanaka, T.3
Nakatsuji, N.4
-
234
-
-
77950477577
-
Coilin-dependent snrnp assembly is essential for zebrafish embryogenesis
-
Strzelecka, M.; Trowitzsch, S.; Weber, G.; Luhrmann, R.; Oates, A. C.; Neugebauer, K. M. Coilin-dependent snrnp assembly is essential for zebrafish embryogenesis. Nat. Struct. Mol. Biol. 2010, 17, 403-409.
-
(2010)
Nat. Struct. Mol. Biol
, vol.17
, pp. 403-409
-
-
Strzelecka, M.1
Trowitzsch, S.2
Weber, G.3
Luhrmann, R.4
Oates, A.C.5
Neugebauer, K.M.6
-
235
-
-
79961243037
-
Limiting amounts of centrosome material set centrosome size in C. elegans embryos
-
Decker, M.; Jaensch, S.; Pozniakovsky, A.; Zinke, A.; O'Connell, K. F.; Zachariae, W.; Myers, E.; Hyman, A. A. Limiting amounts of centrosome material set centrosome size in C. elegans embryos. Curr. Biol. 2011, 21, 1259-1267.
-
(2011)
Curr. Biol
, vol.21
, pp. 1259-1267
-
-
Decker, M.1
Jaensch, S.2
Pozniakovsky, A.3
Zinke, A.4
O'Connell, K.F.5
Zachariae, W.6
Myers, E.7
Hyman, A.A.8
-
236
-
-
84874040052
-
Dual specificity kinase dyrk3 couples stress granule condensation/dissolution to mtorc1 signaling
-
Wippich, F.; Bodenmiller, B.; Trajkovska, M. G.; Wanka, S.; Aebersold, R.; Pelkmans, L. Dual specificity kinase dyrk3 couples stress granule condensation/dissolution to mtorc1 signaling. Cell 2013, 152, 791-805.
-
(2013)
Cell
, vol.152
, pp. 791-805
-
-
Wippich, F.1
Bodenmiller, B.2
Trajkovska, M.G.3
Wanka, S.4
Aebersold, R.5
Pelkmans, L.6
-
237
-
-
0034611785
-
High mobility of proteins in the mammalian cell nucleus
-
Phair, R. D.; Misteli, T. High mobility of proteins in the mammalian cell nucleus. Nature 2000, 404, 604-609.
-
(2000)
Nature
, vol.404
, pp. 604-609
-
-
Phair, R.D.1
Misteli, T.2
-
238
-
-
0035831045
-
Protein mobility within the nucleus-what are the right moves?
-
Pederson, T. Protein mobility within the nucleus-what are the right moves? Cell 2001, 104, 635-638.
-
(2001)
Cell
, vol.104
, pp. 635-638
-
-
Pederson, T.1
-
239
-
-
11144328968
-
Cajal bodies, nucleoli, and speckles in the xenopus oocyte nucleus have a low-density, sponge-like structure
-
Handwerger, K. E.; Cordero, J. A.; Gall, J. G. Cajal bodies, nucleoli, and speckles in the xenopus oocyte nucleus have a low-density, sponge-like structure. Mol. Biol. Cell 2005, 16, 202-211.
-
(2005)
Mol. Biol. Cell
, vol.16
, pp. 202-211
-
-
Handwerger, K.E.1
Cordero, J.A.2
Gall, J.G.3
-
240
-
-
79955497151
-
P granules extend the nuclear pore complex environment in the C. elegans germ line
-
Updike, D. L.; Hachey, S. J.; Kreher, J.; Strome, S. P granules extend the nuclear pore complex environment in the C. elegans germ line. J. Cell Biol. 2011, 192, 939-948.
-
(2011)
J. Cell Biol
, vol.192
, pp. 939-948
-
-
Updike, D.L.1
Hachey, S.J.2
Kreher, J.3
Strome, S.4
-
241
-
-
79952723337
-
Active liquid-like behavior of nucleoli determines their size and shape in xenopus laevis oocytes
-
Brangwynne, C. P.; Mitchison, T. J.; Hyman, A. A. Active liquid-like behavior of nucleoli determines their size and shape in xenopus laevis oocytes. Proc. Natl. Acad. Sci. USA 2011, 108, 4334-4339.
-
(2011)
Proc. Natl. Acad. Sci. USA
, vol.108
, pp. 4334-4339
-
-
Brangwynne, C.P.1
Mitchison, T.J.2
Hyman, A.A.3
-
242
-
-
84862776582
-
Phase transitions in the assembly of multivalent signalling proteins
-
Li, P.; Banjade, S.; Cheng, H. C.; Kim, S.; Chen, B.; Guo, L.; Llaguno, M.; Hollingsworth, J. V.; King, D. S.; Banani, S. F.; et al. Phase transitions in the assembly of multivalent signalling proteins. Nature 2012, 483, 336-340.
-
(2012)
Nature
, vol.483
, pp. 336-340
-
-
Li, P.1
Banjade, S.2
Cheng, H.C.3
Kim, S.4
Chen, B.5
Guo, L.6
Llaguno, M.7
Hollingsworth, J.V.8
King, D.S.9
Banani, S.F.10
-
243
-
-
84879345495
-
Myelin membrane assembly is driven by a phase transition of myelin basic proteins into a cohesive protein meshwork
-
Aggarwal, S.; Snaidero, N.; Pahler, G.; Frey, S.; Sanchez, P.; Zweckstetter, M.; Janshoff, A.; Schneider, A.; Weil, M. T.; Schaap, I. A.; et al. Myelin membrane assembly is driven by a phase transition of myelin basic proteins into a cohesive protein meshwork. PLoS Biol. 2013, 11, e1001577.
-
(2013)
PLoS Biol
, vol.11
-
-
Aggarwal, S.1
Snaidero, N.2
Pahler, G.3
Frey, S.4
Sanchez, P.5
Zweckstetter, M.6
Janshoff, A.7
Schneider, A.8
Weil, M.T.9
Schaap, I.A.10
-
244
-
-
84885179258
-
A nuclear f-actin scaffold stabilizes ribonucleoprotein droplets against gravity in large cells
-
Feric, M.; Brangwynne, C. P. A nuclear f-actin scaffold stabilizes ribonucleoprotein droplets against gravity in large cells. Nat. Cell Biol. 2013, 15, 1253-1259.
-
(2013)
Nat. Cell Biol
, vol.15
, pp. 1253-1259
-
-
Feric, M.1
Brangwynne, C.P.2
-
245
-
-
84870187166
-
Aqueous phase separation as a possible route to compartmentalization of biological molecules
-
Keating, C. D. Aqueous phase separation as a possible route to compartmentalization of biological molecules. Acc. Chem. Res. 2012, 45, 2114-2124.
-
(2012)
Acc. Chem. Res
, vol.45
, pp. 2114-2124
-
-
Keating, C.D.1
-
246
-
-
0028940740
-
Phase separation in cytoplasm, due to macromolecular crowding, is the basis for microcompartmentation
-
Walter, H.; Brooks, D. E. Phase separation in cytoplasm, due to macromolecular crowding, is the basis for microcompartmentation. FEBS Lett. 1995, 361, 135-139.
-
(1995)
FEBS Lett
, vol.361
, pp. 135-139
-
-
Walter, H.1
Brooks, D.E.2
-
247
-
-
0033991054
-
Consequences of phase separation in cytoplasm
-
Walter, H. Consequences of phase separation in cytoplasm. Int. Rev. Cytol. 2000, 192, 331-343.
-
(2000)
Int. Rev. Cytol
, vol.192
, pp. 331-343
-
-
Walter, H.1
-
248
-
-
0003425162
-
-
Academic Press: Orlando, FL, USA
-
Walter, H.; Brooks, D. E.; Fisher, D. Partitioning in Aqueous Two-Phase Systems: Theory, Methods, Uses, and Applications to Biotechnology; Academic Press: Orlando, FL, USA, 1985.
-
(1985)
Partitioning in Aqueous Two-Phase Systems: Theory, Methods, Uses, and Applications to Biotechnology
-
-
Walter, H.1
Brooks, D.E.2
Fisher, D.3
-
250
-
-
85025543314
-
Some physico-chemical aspects of protein processing into foodstuffs
-
Tolstoguzov, V. B. Some physico-chemical aspects of protein processing into foodstuffs. Food Hydrocoll. 1988, 2, 339-370.
-
(1988)
Food Hydrocoll
, vol.2
, pp. 339-370
-
-
Tolstoguzov, V.B.1
-
251
-
-
0033990568
-
Macromolecular crowding and its consequences
-
Johansson, H. O.; Brooks, D. E.; Haynes, C. A. Macromolecular crowding and its consequences. Int. Rev. Cytol. 2000, 192, 155-170.
-
(2000)
Int. Rev. Cytol
, vol.192
, pp. 155-170
-
-
Johansson, H.O.1
Brooks, D.E.2
Haynes, C.A.3
-
253
-
-
84891136017
-
Phase separation as a possible means of nuclear compartmentalization
-
Aumiller, W. M., Jr.; Davis, B. W.; Keating, C. D. Phase separation as a possible means of nuclear compartmentalization. Int. Rev. Cell Mol. Biol. 2014, 307, 109-149.
-
(2014)
Int. Rev. Cell Mol. Biol
, vol.307
, pp. 109-149
-
-
Aumiller, W.M.1
Davis, B.W.2
Keating, C.D.3
-
254
-
-
1942425450
-
A role for macromolecular crowding effects in the assembly and function of compartments in the nucleus
-
Hancock, R. A role for macromolecular crowding effects in the assembly and function of compartments in the nucleus. J. Struct. Biol. 2004, 146, 281-290.
-
(2004)
J. Struct. Biol
, vol.146
, pp. 281-290
-
-
Hancock, R.1
-
255
-
-
0027943344
-
Macromolecular crowding effects on the interaction of DNA with escherichia coli DNA-binding proteins: A model for bacterial nucleoid stabilization
-
Murphy, L. D.; Zimmerman, S. B. Macromolecular crowding effects on the interaction of DNA with escherichia coli DNA-binding proteins: A model for bacterial nucleoid stabilization. Biochim. Biophys. Acta 1994, 1219, 277-284.
-
(1994)
Biochim. Biophys. Acta
, vol.1219
, pp. 277-284
-
-
Murphy, L.D.1
Zimmerman, S.B.2
-
256
-
-
0030605841
-
Macromolecular crowding and the mandatory condensation of DNA in bacteria
-
Zimmerman, S. B.; Murphy, L. D. Macromolecular crowding and the mandatory condensation of DNA in bacteria. FEBS Lett. 1996, 390, 245-248.
-
(1996)
FEBS Lett
, vol.390
, pp. 245-248
-
-
Zimmerman, S.B.1
Murphy, L.D.2
-
257
-
-
0030875091
-
Stabilization of compact spermidine nucleoids from escherichia coli under crowded conditions: Implications for in vivo nucleoid structure
-
Murphy, L. D.; Zimmerman, S. B. Stabilization of compact spermidine nucleoids from escherichia coli under crowded conditions: Implications for in vivo nucleoid structure. J. Struct. Biol. 1997, 119, 336-346.
-
(1997)
J. Struct. Biol
, vol.119
, pp. 336-346
-
-
Murphy, L.D.1
Zimmerman, S.B.2
-
258
-
-
31344453142
-
Cooperative transitions of isolated Escherichia coli nucleoids: Implications for the nucleoid as a cellular phase
-
Zimmerman, S. B. Cooperative transitions of isolated Escherichia coli nucleoids: Implications for the nucleoid as a cellular phase. J. Struct. Biol. 2006, 153, 160-175.
-
(2006)
J. Struct. Biol
, vol.153
, pp. 160-175
-
-
Zimmerman, S.B.1
-
259
-
-
84859997953
-
Structure of metaphase chromosomes: A role for effects of macromolecular crowding
-
Hancock, R. Structure of metaphase chromosomes: A role for effects of macromolecular crowding. PLoS One 2011, 7, e36045.
-
(2011)
PLoS One
, vol.7
-
-
Hancock, R.1
-
260
-
-
84861366837
-
Macromolecular crowding directs extracellular matrix organization and mesenchymal stem cell behavior
-
Zeiger, A. S.; Loe, F. C.; Li, R.; Raghunath, M.; van Vliet, K. J. Macromolecular crowding directs extracellular matrix organization and mesenchymal stem cell behavior. PLoS One 2012, 7, e37904.
-
(2012)
PLoS One
, vol.7
-
-
Zeiger, A.S.1
Loe, F.C.2
Li, R.3
Raghunath, M.4
van Vliet, K.J.5
-
261
-
-
0029981197
-
Alternative conformations of amyloidogenic proteins govern their behavior
-
Kelly, J. W. Alternative conformations of amyloidogenic proteins govern their behavior. Curr. Opin. Struct. Biol. 1996, 6, 11-17.
-
(1996)
Curr. Opin. Struct. Biol
, vol.6
, pp. 11-17
-
-
Kelly, J.W.1
-
262
-
-
33746377894
-
Protein misfolding, functional amyloid, and human disease
-
Chiti, F.; Dobson, C. M. Protein misfolding, functional amyloid, and human disease. Annu. Rev. Biochem. 2006, 75, 333-366.
-
(2006)
Annu. Rev. Biochem
, vol.75
, pp. 333-366
-
-
Chiti, F.1
Dobson, C.M.2
-
263
-
-
2342569618
-
Conformational constraints for amyloid fibrillation: The importance of being unfolded
-
Uversky, V. N.; Fink, A. L. Conformational constraints for amyloid fibrillation: The importance of being unfolded. Biochim. Biophys. Acta 2004, 1698, 131-153.
-
(2004)
Biochim. Biophys. Acta
, vol.1698
, pp. 131-153
-
-
Uversky, V.N.1
Fink, A.L.2
-
264
-
-
0032006678
-
The alternative conformations of amyloidogenic proteins and their multi-step assembly pathways
-
Kelly, J. W. The alternative conformations of amyloidogenic proteins and their multi-step assembly pathways. Curr. Opin. Struct. Biol. 1998, 8, 101-106.
-
(1998)
Curr. Opin. Struct. Biol
, vol.8
, pp. 101-106
-
-
Kelly, J.W.1
-
265
-
-
0031932169
-
Protein aggregation: Folding aggregates, inclusion bodies and amyloid
-
Fink, A. L. Protein aggregation: Folding aggregates, inclusion bodies and amyloid. Fold. Des. 1998, 3, R9-R23.
-
(1998)
Fold. Des
, vol.3
, pp. R9-R23
-
-
Fink, A.L.1
-
266
-
-
0033045668
-
Biological activity and pathological implications of misfolded proteins
-
Bellotti, V.; Mangione, P.; Stoppini, M. Biological activity and pathological implications of misfolded proteins. Cell Mol. Life Sci. 1999, 55, 977-991.
-
(1999)
Cell Mol. Life Sci
, vol.55
, pp. 977-991
-
-
Bellotti, V.1
Mangione, P.2
Stoppini, M.3
-
267
-
-
0032736692
-
Protein deposits as the molecular basis of amyloidosis. I. Systemic amyloidoses
-
Uversky, V. N.; Talapatra, A.; Gillespie, J. R.; Fink, A. L. Protein deposits as the molecular basis of amyloidosis. I. Systemic amyloidoses. Med. Sci. Monit. 1999, 5, 1001-1012.
-
(1999)
Med. Sci. Monit
, vol.5
, pp. 1001-1012
-
-
Uversky, V.N.1
Talapatra, A.2
Gillespie, J.R.3
Fink, A.L.4
-
268
-
-
0033398261
-
Protein deposits as the molecular basis of amyloidosis. II. Localized amyloidosis and neurodegenerative disordres
-
Uversky, V. N.; Talapatra, A.; Gillespie, J. R.; Fink, A. L. Protein deposits as the molecular basis of amyloidosis. II. Localized amyloidosis and neurodegenerative disordres. Med. Sci. Monit. 1999, 5, 1238-1254.
-
(1999)
Med. Sci. Monit
, vol.5
, pp. 1238-1254
-
-
Uversky, V.N.1
Talapatra, A.2
Gillespie, J.R.3
Fink, A.L.4
-
269
-
-
0033616682
-
Evolution of amyloid: What normal protein folding may tell us about fibrillogenesis and disease
-
Lansbury, P. T., Jr. Evolution of amyloid: What normal protein folding may tell us about fibrillogenesis and disease. Proc. Natl. Acad. Sci. USA 1999, 96, 3342-3344.
-
(1999)
Proc. Natl. Acad. Sci. USA
, vol.96
, pp. 3342-3344
-
-
Lansbury, P.T.1
-
270
-
-
0033977086
-
Amyloid fibrillogenesis: Themes and variations
-
Rochet, J. C.; Lansbury, P. T., Jr. Amyloid fibrillogenesis: Themes and variations. Curr. Opin. Struct. Biol. 2000, 10, 60-68.
-
(2000)
Curr. Opin. Struct. Biol
, vol.10
, pp. 60-68
-
-
Rochet, J.C.1
Lansbury, P.T.2
-
271
-
-
0035961329
-
The structural basis of protein folding and its links with human disease
-
Dobson, C. M. The structural basis of protein folding and its links with human disease. Philos. Trans. R. Soc. Lond. B Biol. Sci. 2001, 356, 133-145.
-
(2001)
Philos. Trans. R. Soc. Lond. B Biol. Sci
, vol.356
, pp. 133-145
-
-
Dobson, C.M.1
-
272
-
-
0036377156
-
Amyloid-fibril formation. Proposed mechanisms and relevance to conformational disease
-
Zerovnik, E. Amyloid-fibril formation. Proposed mechanisms and relevance to conformational disease. Eur. J. Biochem. 2002, 269, 3362-3371.
-
(2002)
Eur. J. Biochem
, vol.269
, pp. 3362-3371
-
-
Zerovnik, E.1
-
273
-
-
0032877134
-
Analysis of protein aggregation kinetics
-
Ferrone, F. Analysis of protein aggregation kinetics. Methods Enzymol. 1999, 309, 256-274.
-
(1999)
Methods Enzymol
, vol.309
, pp. 256-274
-
-
Ferrone, F.1
-
274
-
-
0033200063
-
Protein misfolding, evolution and disease
-
Dobson, C. M. Protein misfolding, evolution and disease. Trends Biochem. Sci. 1999, 24, 329-332.
-
(1999)
Trends Biochem. Sci
, vol.24
, pp. 329-332
-
-
Dobson, C.M.1
-
275
-
-
0023722437
-
Synuclein: A neuron-specific protein localized to the nucleus and presynaptic nerve terminal
-
Maroteaux, L.; Campanelli, J. T.; Scheller, R. H. Synuclein: A neuron-specific protein localized to the nucleus and presynaptic nerve terminal. J. Neurosci. 1988, 8, 2804-2815.
-
(1988)
J. Neurosci
, vol.8
, pp. 2804-2815
-
-
Maroteaux, L.1
Campanelli, J.T.2
Scheller, R.H.3
-
276
-
-
0028277520
-
Identification of two distinct synucleins from human brain
-
Jakes, R.; Spillantini, M. G.; Goedert, M. Identification of two distinct synucleins from human brain. FEBS Lett. 1994, 345, 27-32.
-
(1994)
FEBS Lett
, vol.345
, pp. 27-32
-
-
Jakes, R.1
Spillantini, M.G.2
Goedert, M.3
-
277
-
-
0028985267
-
The precursor protein of non-A beta component of alzheimer's disease amyloid is a presynaptic protein of the central nervous system
-
Iwai, A.; Masliah, E.; Yoshimoto, M.; Ge, N.; Flanagan, L.; de Silva, H. A.; Kittel, A.; Saitoh, T. The precursor protein of non-A beta component of alzheimer's disease amyloid is a presynaptic protein of the central nervous system. Neuron 1995, 14, 467-475.
-
(1995)
Neuron
, vol.14
, pp. 467-475
-
-
Iwai, A.1
Masliah, E.2
Yoshimoto, M.3
Ge, N.4
Flanagan, L.5
de Silva, H.A.6
Kittel, A.7
Saitoh, T.8
-
278
-
-
0029904487
-
NACP, a protein implicated in alzheimer's disease and learning, is natively unfolded
-
Weinreb, P. H.; Zhen, W.; Poon, A. W.; Conway, K. A.; Lansbury, P. T., Jr. NACP, a protein implicated in alzheimer's disease and learning, is natively unfolded. Biochemistry 1996, 35, 13709-13715.
-
(1996)
Biochemistry
, vol.35
, pp. 13709-13715
-
-
Weinreb, P.H.1
Zhen, W.2
Poon, A.W.3
Conway, K.A.4
Lansbury, P.T.5
-
279
-
-
0035815664
-
Evidence for a partially folded intermediate in alpha-synuclein fibril formation
-
Uversky, V. N.; Li, J.; Fink, A. L. Evidence for a partially folded intermediate in alpha-synuclein fibril formation. J. Biol. Chem. 2001, 276, 10737-10744.
-
(2001)
J. Biol. Chem
, vol.276
, pp. 10737-10744
-
-
Uversky, V.N.1
Li, J.2
Fink, A.L.3
-
280
-
-
0035815115
-
Conformational properties of alpha-synuclein in its free and lipid-associated states
-
Eliezer, D.; Kutluay, E.; Bussell, R., Jr.; Browne, G. Conformational properties of alpha-synuclein in its free and lipid-associated states. J. Mol. Biol. 2001, 307, 1061-1073.
-
(2001)
J. Mol. Biol
, vol.307
, pp. 1061-1073
-
-
Eliezer, D.1
Kutluay, E.2
Bussell, R.3
Browne, G.4
-
281
-
-
0032568534
-
Alpha-synuclein in filamentous inclusions of lewy bodies from parkinson's disease and dementia with lewy bodies
-
Spillantini, M. G.; Crowther, R. A.; Jakes, R.; Hasegawa, M.; Goedert, M. Alpha-synuclein in filamentous inclusions of lewy bodies from parkinson's disease and dementia with lewy bodies. Proc. Natl. Acad. Sci. USA 1998, 95, 6469-6473.
-
(1998)
Proc. Natl. Acad. Sci. USA
, vol.95
, pp. 6469-6473
-
-
Spillantini, M.G.1
Crowther, R.A.2
Jakes, R.3
Hasegawa, M.4
Goedert, M.5
-
282
-
-
0034531475
-
The alpha-synucleinopathies: Parkinson's disease, dementia with lewy bodies, and multiple system atrophy
-
Spillantini, M. G.; Goedert, M. The alpha-synucleinopathies: Parkinson's disease, dementia with lewy bodies, and multiple system atrophy. Ann. N. Y. Acad. Sci. 2000, 920, 16-27.
-
(2000)
Ann. N.Y. Acad. Sci
, vol.920
, pp. 16-27
-
-
Spillantini, M.G.1
Goedert, M.2
-
283
-
-
26444544353
-
Alpha-synuclein dysfunction in lewy body diseases
-
Tofaris, G. K.; Spillantini, M. G. Alpha-synuclein dysfunction in lewy body diseases. Mov. Disord. 2005, 20, S37-S44.
-
(2005)
Mov. Disord
, vol.20
, pp. S37-S44
-
-
Tofaris, G.K.1
Spillantini, M.G.2
-
284
-
-
0031762949
-
Fatal attractions: Abnormal protein aggregation and neuron death in parkinson's disease and lewy body dementia
-
Trojanowski, J. Q.; Goedert, M.; Iwatsubo, T.; Lee, V. M. Fatal attractions: Abnormal protein aggregation and neuron death in parkinson's disease and lewy body dementia. Cell Death Differ. 1998, 5, 832-837.
-
(1998)
Cell Death Differ
, vol.5
, pp. 832-837
-
-
Trojanowski, J.Q.1
Goedert, M.2
Iwatsubo, T.3
Lee, V.M.4
-
285
-
-
0032608987
-
Pathobiology of the lewy body
-
Galvin, J. E.; Lee, V. M.; Schmidt, M. L.; Tu, P. H.; Iwatsubo, T.; Trojanowski, J. Q. Pathobiology of the lewy body. Adv. Neurol. 1999, 80, 313-324.
-
(1999)
Adv. Neurol
, vol.80
, pp. 313-324
-
-
Galvin, J.E.1
Lee, V.M.2
Schmidt, M.L.3
Tu, P.H.4
Iwatsubo, T.5
Trojanowski, J.Q.6
-
286
-
-
0035409575
-
Alpha-synuclein and neurodegenerative diseases
-
Goedert, M. Alpha-synuclein and neurodegenerative diseases. Nat. Rev. Neurosci. 2001, 2, 492-501.
-
(2001)
Nat. Rev. Neurosci
, vol.2
, pp. 492-501
-
-
Goedert, M.1
-
287
-
-
0035031135
-
Parkinson's disease and other alpha-synucleinopathies
-
Goedert, M. Parkinson's disease and other alpha-synucleinopathies. Clin. Chem. Lab. Med. 2001, 39, 308-312.
-
(2001)
Clin. Chem. Lab. Med
, vol.39
, pp. 308-312
-
-
Goedert, M.1
-
288
-
-
34548620297
-
Neuropathology, biochemistry, and biophysics of alpha-synuclein aggregation
-
Uversky, V. N. Neuropathology, biochemistry, and biophysics of alpha-synuclein aggregation. J. Neurochem. 2007, 103, 17-37.
-
(2007)
J. Neurochem
, vol.103
, pp. 17-37
-
-
Uversky, V.N.1
-
289
-
-
5444248216
-
Biophysical properties of human alpha-synuclein and its role in parkinson's disease
-
Pandalai, S.G., Ed.; Transworld Research Network: Kerala, India
-
Uversky, V. N.; Fink, A. L. Biophysical properties of human alpha-synuclein and its role in parkinson's disease. In Recent Research Developments in Proteins; Pandalai, S. G., Ed.; Transworld Research Network: Kerala, India, 2002; pp. 153-186.
-
(2002)
Recent Research Developments in Proteins
, pp. 153-186
-
-
Uversky, V.N.1
Fink, A.L.2
-
290
-
-
0141677840
-
A protein-chameleon: Conformational plasticity of alpha-synuclein, a disordered protein involved in neurodegenerative disorders
-
Uversky, V. N. A protein-chameleon: Conformational plasticity of alpha-synuclein, a disordered protein involved in neurodegenerative disorders. J. Biomol. Struct. Dyn. 2003, 21, 211-234.
-
(2003)
J. Biomol. Struct. Dyn
, vol.21
, pp. 211-234
-
-
Uversky, V.N.1
-
291
-
-
0035941201
-
Metal-triggered structural transformations, aggregation, and fibrillation of human alpha-synuclein. A possible molecular NK between Parkinson's disease and heavy metal exposure
-
Uversky, V. N.; Li, J.; Fink, A. L. Metal-triggered structural transformations, aggregation, and fibrillation of human alpha-synuclein. A possible molecular NK between Parkinson's disease and heavy metal exposure. J. Biol. Chem. 2001, 276, 44284-44296.
-
(2001)
J. Biol. Chem
, vol.276
, pp. 44284-44296
-
-
Uversky, V.N.1
Li, J.2
Fink, A.L.3
-
292
-
-
0036777847
-
Synergistic effects of pesticides and metals on the fibrillation of alpha-synuclein: Implications for parkinson's disease
-
Uversky, V. N.; Li, J.; Bower, K.; Fink, A. L. Synergistic effects of pesticides and metals on the fibrillation of alpha-synuclein: Implications for parkinson's disease. Neurotoxicology 2002, 23, 527-536.
-
(2002)
Neurotoxicology
, vol.23
, pp. 527-536
-
-
Uversky, V.N.1
Li, J.2
Bower, K.3
Fink, A.L.4
-
293
-
-
0035816404
-
Pesticides directly accelerate the rate of alpha-synuclein fibril formation: A possible factor in parkinson's disease
-
Uversky, V. N.; Li, J.; Fink, A. L. Pesticides directly accelerate the rate of alpha-synuclein fibril formation: A possible factor in parkinson's disease. FEBS Lett. 2001, 500, 105-108.
-
(2001)
FEBS Lett
, vol.500
, pp. 105-108
-
-
Uversky, V.N.1
Li, J.2
Fink, A.L.3
-
294
-
-
0037127197
-
The herbicide paraquat causes up-regulation and aggregation of alpha-synuclein in mice: Paraquat and alpha-synuclein
-
Manning-Bog, A. B.; McCormack, A. L.; Li, J.; Uversky, V. N.; Fink, A. L.; di Monte, D. A. The herbicide paraquat causes up-regulation and aggregation of alpha-synuclein in mice: Paraquat and alpha-synuclein. J. Biol. Chem. 2002, 277, 1641-1644.
-
(2002)
J. Biol. Chem
, vol.277
, pp. 1641-1644
-
-
Manning-Bog, A.B.1
McCormack, A.L.2
Li, J.3
Uversky, V.N.4
Fink, A.L.5
di Monte, D.A.6
-
295
-
-
0037022186
-
Heparin and other glycosaminoglycans stimulate the formation of amyloid fibrils from alpha-synuclein in vitro
-
Cohlberg, J. A.; Li, J.; Uversky, V. N.; Fink, A. L. Heparin and other glycosaminoglycans stimulate the formation of amyloid fibrils from alpha-synuclein in vitro. Biochemistry 2002, 41, 1502-1511.
-
(2002)
Biochemistry
, vol.41
, pp. 1502-1511
-
-
Cohlberg, J.A.1
Li, J.2
Uversky, V.N.3
Fink, A.L.4
-
296
-
-
0038456964
-
Nuclear localization of alpha-synuclein and its interaction with histones
-
Goers, J.; Manning-Bog, A. B.; McCormack, A. L.; Millett, I. S.; Doniach, S.; di Monte, D. A.; Uversky, V. N.; Fink, A. L. Nuclear localization of alpha-synuclein and its interaction with histones. Biochemistry 2003, 42, 8465-8471.
-
(2003)
Biochemistry
, vol.42
, pp. 8465-8471
-
-
Goers, J.1
Manning-Bog, A.B.2
McCormack, A.L.3
Millett, I.S.4
Doniach, S.5
di Monte, D.A.6
Uversky, V.N.7
Fink, A.L.8
-
297
-
-
0037378356
-
Polycation-induced oligomerization and accelerated fibrillation of human alpha-synuclein in vitro
-
Goers, J.; Uversky, V. N.; Fink, A. L. Polycation-induced oligomerization and accelerated fibrillation of human alpha-synuclein in vitro. Protein Sci. 2003, 12, 702-707.
-
(2003)
Protein Sci
, vol.12
, pp. 702-707
-
-
Goers, J.1
Uversky, V.N.2
Fink, A.L.3
-
298
-
-
0037432332
-
Conformational behavior and aggregation of alpha-synuclein in organic solvents: Modeling the effects of membranes
-
Munishkina, L. A.; Phelan, C.; Uversky, V. N.; Fink, A. L. Conformational behavior and aggregation of alpha-synuclein in organic solvents: Modeling the effects of membranes. Biochemistry 2003, 42, 2720-2730.
-
(2003)
Biochemistry
, vol.42
, pp. 2720-2730
-
-
Munishkina, L.A.1
Phelan, C.2
Uversky, V.N.3
Fink, A.L.4
-
299
-
-
0035976814
-
Trimethylamine-N-oxide-induced folding of alpha-synuclein
-
Uversky, V. N.; Li, J.; Fink, A. L. Trimethylamine-N-oxide-induced folding of alpha-synuclein. FEBS Lett. 2001, 509, 31-35.
-
(2001)
FEBS Lett
, vol.509
, pp. 31-35
-
-
Uversky, V.N.1
Li, J.2
Fink, A.L.3
-
300
-
-
50149096820
-
Guiding protein aggregation with macromolecular crowding
-
Munishkina, L. A.; Ahmad, A.; Fink, A. L.; Uversky, V. N. Guiding protein aggregation with macromolecular crowding. Biochemistry 2008, 47, 8993-9006.
-
(2008)
Biochemistry
, vol.47
, pp. 8993-9006
-
-
Munishkina, L.A.1
Ahmad, A.2
Fink, A.L.3
Uversky, V.N.4
-
301
-
-
54249116911
-
Concerted action of metals and macromolecular crowding on the fibrillation of alpha-synuclein
-
Munishkina, L. A.; Fink, A. L.; Uversky, V. N. Concerted action of metals and macromolecular crowding on the fibrillation of alpha-synuclein. Protein Peptide Lett. 2008, 15, 1079-1085.
-
(2008)
Protein Peptide Lett
, vol.15
, pp. 1079-1085
-
-
Munishkina, L.A.1
Fink, A.L.2
Uversky, V.N.3
-
302
-
-
67149087384
-
Accelerated fibrillation of alpha-synuclein induced by the combined action of macromolecular crowding and factors inducing partial folding
-
Munishkina, L. A.; Fink, A. L.; Uversky, V. N. Accelerated fibrillation of alpha-synuclein induced by the combined action of macromolecular crowding and factors inducing partial folding. Curr. Alzheimer Res. 2009, 6, 252-260.
-
(2009)
Curr. Alzheimer Res
, vol.6
, pp. 252-260
-
-
Munishkina, L.A.1
Fink, A.L.2
Uversky, V.N.3
-
303
-
-
84872370305
-
Macromolecular crowding modulates the kinetics and morphology of amyloid self-assembly by beta-lactoglobulin
-
Ma, B.; Xie, J.; Wei, L.; Li, W. Macromolecular crowding modulates the kinetics and morphology of amyloid self-assembly by beta-lactoglobulin. Int. J. Biol. Macromol. 2013, 53, 82-87.
-
(2013)
Int. J. Biol. Macromol
, vol.53
, pp. 82-87
-
-
Ma, B.1
Xie, J.2
Wei, L.3
Li, W.4
-
304
-
-
71049123175
-
Crowded cell-like environment accelerates the nucleation step of amyloidogenic protein misfolding
-
Zhou, Z.; Fan, J. B.; Zhu, H. L.; Shewmaker, F.; Yan, X.; Chen, X.; Chen, J.; Xiao, G. F.; Guo, L.; Liang, Y. Crowded cell-like environment accelerates the nucleation step of amyloidogenic protein misfolding. J. Biol. Chem. 2009, 284, 30148-30158.
-
(2009)
J. Biol. Chem
, vol.284
, pp. 30148-30158
-
-
Zhou, Z.1
Fan, J.B.2
Zhu, H.L.3
Shewmaker, F.4
Yan, X.5
Chen, X.6
Chen, J.7
Xiao, G.F.8
Guo, L.9
Liang, Y.10
-
305
-
-
33746099650
-
Protein aggregation in crowded environments
-
Ellis, R. J.; Minton, A. P. Protein aggregation in crowded environments. Biol. Chem. 2006, 387, 485-497.
-
(2006)
Biol. Chem
, vol.387
, pp. 485-497
-
-
Ellis, R.J.1
Minton, A.P.2
-
306
-
-
84917700965
-
Assessment of the effect of macromolecular crowding on aggregation behaviour of a model amyloidogenic peptide
-
Gaharwar, B.; Gour, S.; Kaushik, V.; Gupta, N.; Kumar, V.; Hause, G.; Yadav, J. K. Assessment of the effect of macromolecular crowding on aggregation behaviour of a model amyloidogenic peptide. Protein Peptide Lett. 2015, 22, 87-93.
-
(2015)
Protein Peptide Lett
, vol.22
, pp. 87-93
-
-
Gaharwar, B.1
Gour, S.2
Kaushik, V.3
Gupta, N.4
Kumar, V.5
Hause, G.6
Yadav, J.K.7
-
307
-
-
84880844306
-
Macromolecular crowding as a suppressor of human iapp fibril formation and cytotoxicity
-
Seeliger, J.; Werkmuller, A.; Winter, R. Macromolecular crowding as a suppressor of human iapp fibril formation and cytotoxicity. PLoS One 2013, 8, e69652.
-
(2013)
PLoS One
, vol.8
-
-
Seeliger, J.1
Werkmuller, A.2
Winter, R.3
-
308
-
-
84860446148
-
The contrasting effect of macromolecular crowding on amyloid fibril formation
-
Ma, Q.; Fan, J. B.; Zhou, Z.; Zhou, B. R.; Meng, S. R.; Hu, J. Y.; Chen, J.; Liang, Y. The contrasting effect of macromolecular crowding on amyloid fibril formation. PLoS One 2012, 7, e36288.
-
(2012)
PLoS One
, vol.7
-
-
Ma, Q.1
Fan, J.B.2
Zhou, Z.3
Zhou, B.R.4
Meng, S.R.5
Hu, J.Y.6
Chen, J.7
Liang, Y.8
-
309
-
-
84917680184
-
Macromolecular crowding decelerates aggregation of a beta-rich protein, bovine carbonic anhydrase: A case study
-
Mittal, S.; Singh, L. R. Macromolecular crowding decelerates aggregation of a beta-rich protein, bovine carbonic anhydrase: A case study. J. Biochem. 2014, 156, 273-282.
-
(2014)
J. Biochem
, vol.156
, pp. 273-282
-
-
Mittal, S.1
Singh, L.R.2
-
310
-
-
33745215602
-
The effect of the presence of globular proteins and elongated polymers on enzyme activity
-
Derham, B. K.; Harding, J. J. The effect of the presence of globular proteins and elongated polymers on enzyme activity. Biochim. Biophys. Acta 2006, 1764, 1000-1006.
-
(2006)
Biochim. Biophys. Acta
, vol.1764
, pp. 1000-1006
-
-
Derham, B.K.1
Harding, J.J.2
-
311
-
-
0023056483
-
Stabilization of t4 polynucleotide kinase by macromolecular crowding
-
Harrison, B.; Zimmerman, S. B. Stabilization of t4 polynucleotide kinase by macromolecular crowding. Nucleic Acids Res. 1986, 14, 1863-1870.
-
(1986)
Nucleic Acids Res
, vol.14
, pp. 1863-1870
-
-
Harrison, B.1
Zimmerman, S.B.2
-
312
-
-
0022819365
-
T4 polynucleotide kinase: Macromolecular crowding increases the efficiency of reaction at DNA termini
-
Harrison, B.; Zimmerman, S. B. T4 polynucleotide kinase: Macromolecular crowding increases the efficiency of reaction at DNA termini. Anal. Biochem. 1986, 158, 307-315.
-
(1986)
Anal. Biochem
, vol.158
, pp. 307-315
-
-
Harrison, B.1
Zimmerman, S.B.2
-
313
-
-
33847127877
-
Escherichia coli aspp activity is enhanced by macromolecular crowding and by both glucose-1, 6-bisphosphate and nucleotide-sugars
-
Moran-Zorzano, M. T.; Viale, A. M.; Munoz, F. J.; Alonso-Casajus, N.; Eydallin, G. G.; Zugasti, B.; Baroja-Fernandez, E.; Pozueta-Romero, J. Escherichia coli aspp activity is enhanced by macromolecular crowding and by both glucose-1, 6-bisphosphate and nucleotide-sugars. FEBS Lett. 2007, 581, 1035-1040.
-
(2007)
FEBS Lett
, vol.581
, pp. 1035-1040
-
-
Moran-Zorzano, M.T.1
Viale, A.M.2
Munoz, F.J.3
Alonso-Casajus, N.4
Eydallin, G.G.5
Zugasti, B.6
Baroja-Fernandez, E.7
Pozueta-Romero, J.8
-
314
-
-
33847404881
-
Albumin is a redox-active crowding agent that promotes oxidative folding of cysteine-rich peptides
-
Buczek, O.; Green, B. R.; Bulaj, G. Albumin is a redox-active crowding agent that promotes oxidative folding of cysteine-rich peptides. Biopolymers 2007, 88, 8-19.
-
(2007)
Biopolymers
, vol.88
, pp. 8-19
-
-
Buczek, O.1
Green, B.R.2
Bulaj, G.3
-
315
-
-
84864479275
-
Effects of macromolecular crowding on the structural stability of human alpha-lactalbumin
-
Zhang, D. L.; Wu, L. J.; Chen, J.; Liang, Y. Effects of macromolecular crowding on the structural stability of human alpha-lactalbumin. Acta Biochim. Biophys. Sin. 2012, 44, 703-711.
-
(2012)
Acta Biochim. Biophys. Sin
, vol.44
, pp. 703-711
-
-
Zhang, D.L.1
Wu, L.J.2
Chen, J.3
Liang, Y.4
-
316
-
-
84868225779
-
Myoglobin unfolding in crowding and confinement
-
Malik, A.; Kundu, J.; Mukherjee, S. K.; Chowdhury, P. K. Myoglobin unfolding in crowding and confinement. J. Phys. Chem. B 2012, 116, 12895-12904.
-
(2012)
J. Phys. Chem. B
, vol.116
, pp. 12895-12904
-
-
Malik, A.1
Kundu, J.2
Mukherjee, S.K.3
Chowdhury, P.K.4
-
317
-
-
84890287425
-
The crowd you're in with: Effects of different types of crowding agents on protein aggregation
-
Breydo, L.; Reddy, K. D.; Piai, A.; Felli, I. C.; Pierattelli, R.; Uversky, V. N. The crowd you're in with: Effects of different types of crowding agents on protein aggregation. Biochim. Biophys. Acta 2014, 1844, 346-357.
-
(2014)
Biochim. Biophys. Acta
, vol.1844
, pp. 346-357
-
-
Breydo, L.1
Reddy, K.D.2
Piai, A.3
Felli, I.C.4
Pierattelli, R.5
Uversky, V.N.6
-
319
-
-
84900453109
-
Camkii binding to glun2b is differentially affected by macromolecular crowding reagents
-
Goodell, D. J.; Eliseeva, T. A.; Coultrap, S. J.; Bayer, K. U. Camkii binding to glun2b is differentially affected by macromolecular crowding reagents. PLoS One 2014, 9, e96522.
-
(2014)
PLoS One
, vol.9
-
-
Goodell, D.J.1
Eliseeva, T.A.2
Coultrap, S.J.3
Bayer, K.U.4
-
320
-
-
33750806263
-
Mixed macromolecular crowding accelerates the refolding of rabbit muscle creatine kinase: Implications for protein folding in physiological environments
-
Du, F.; Zhou, Z.; Mo, Z. Y.; Shi, J. Z.; Chen, J.; Liang, Y. Mixed macromolecular crowding accelerates the refolding of rabbit muscle creatine kinase: Implications for protein folding in physiological environments. J. Mol. Biol. 2006, 364, 469-482.
-
(2006)
J. Mol. Biol
, vol.364
, pp. 469-482
-
-
Du, F.1
Zhou, Z.2
Mo, Z.Y.3
Shi, J.Z.4
Chen, J.5
Liang, Y.6
-
321
-
-
70349310244
-
Nonadditive effects of mixed crowding on protein stability
-
Batra, J.; Xu, K.; Zhou, H. X. Nonadditive effects of mixed crowding on protein stability. Proteins 2009, 77, 133-138.
-
(2009)
Proteins
, vol.77
, pp. 133-138
-
-
Batra, J.1
Xu, K.2
Zhou, H.X.3
-
322
-
-
84861979888
-
Effects of macromolecular crowding on refolding of recombinant human brain-type creatine kinase
-
Fan, Y. Q.; Liu, H. J.; Li, C.; Luan, Y. S.; Yang, J. M.; Wang, Y. L. Effects of macromolecular crowding on refolding of recombinant human brain-type creatine kinase. Int. J. Biol. Macromol. 2012, 51, 113-118.
-
(2012)
Int. J. Biol. Macromol
, vol.51
, pp. 113-118
-
-
Fan, Y.Q.1
Liu, H.J.2
Li, C.3
Luan, Y.S.4
Yang, J.M.5
Wang, Y.L.6
-
323
-
-
43049096368
-
Mixed macromolecular crowding inhibits amyloid formation of hen egg white lysozyme
-
Zhou, B. R.; Zhou, Z.; Hu, Q. L.; Chen, J.; Liang, Y. Mixed macromolecular crowding inhibits amyloid formation of hen egg white lysozyme. Biochim. Biophys. Acta 2008, 1784, 472-480.
-
(2008)
Biochim. Biophys. Acta
, vol.1784
, pp. 472-480
-
-
Zhou, B.R.1
Zhou, Z.2
Hu, Q.L.3
Chen, J.4
Liang, Y.5
|