메뉴 건너뛰기




Volumn 133, Issue 20, 2010, Pages

Macromolecular crowding effects on protein-protein binding affinity and specificity

Author keywords

[No Author keywords available]

Indexed keywords

ADDITIVITY; ASPHERICAL; BINDING FREE ENERGY; BIOLOGICAL FUNCTIONS; COARSE GRAINED MODELS; ENCOUNTER COMPLEX; ENERGY FUNCTIONS; EXCLUDED VOLUME; FITTING PARAMETERS; IN-CELL; INDIVIDUAL PROTEINS; MACROMOLECULAR CROWDING; PROTEIN COMPLEXES; PROTEIN RESIDUES; PROTEIN VOLUME; PROTEIN-PROTEIN BINDING; PROTEIN-PROTEIN COMPLEXES; PROTEIN-PROTEIN INTERACTIONS; QUANTITATIVE DESCRIPTION; QUANTITATIVE MODELS; RELATIVE STABILITIES; SCALED-PARTICLE THEORIES; SIGNIFICANT IMPACTS; STABILIZING EFFECTS;

EID: 78650080825     PISSN: 00219606     EISSN: None     Source Type: Journal    
DOI: 10.1063/1.3516589     Document Type: Article
Times cited : (75)

References (40)
  • 5
    • 0041822089 scopus 로고    scopus 로고
    • Join the crowd
    • DOI 10.1038/425027a
    • R. J. Ellis and A. P. Minton, Nature (London) 425, 27 (2003). 10.1038/425027a (Pubitemid 37101701)
    • (2003) Nature , vol.425 , Issue.6953 , pp. 27-28
    • Ellis, R.J.1    Minton, A.P.2
  • 8
    • 33745909428 scopus 로고    scopus 로고
    • Macromolecular Crowding Stabilizes the Molten Globule Form of Apomyoglobin with Respect to Both Cold and Heat Unfolding
    • DOI 10.1016/j.jmb.2006.05.075, PII S0022283606006942
    • P. McPhie, Y.-S. Ni, and A. P. Minton, J. Mol. Biol. 361, 7 (2006). 10.1016/j.jmb.2006.05.075 (Pubitemid 44041455)
    • (2006) Journal of Molecular Biology , vol.361 , Issue.1 , pp. 7-10
    • McPhie, P.1    Ni, Y.-s.2    Minton, A.P.3
  • 9
    • 34547507851 scopus 로고    scopus 로고
    • Effects of crowding and confinement on the structures of the transition state ensemble in proteins
    • DOI 10.1021/jp068201y
    • M. S. Cheung and D. Thirumalai, J. Phys. Chem. B 111, 8250 (2007). 10.1021/jp068201y (Pubitemid 47184401)
    • (2007) Journal of Physical Chemistry B , vol.111 , Issue.28 , pp. 8250-8257
    • Cheung, M.S.1    Thirumalai, D.2
  • 11
    • 34548627238 scopus 로고    scopus 로고
    • Effects of macromolecular crowding on biochemical reaction equilibria: Amolecular thermodynamic perspective
    • DOI 10.1529/biophysj.107.104646
    • Z. Hu, J. Jiang, and R. Rajagopalan, Biophys. J. 93, 1464 (2007). 10.1529/biophysj.107.104646 (Pubitemid 47403292)
    • (2007) Biophysical Journal , vol.93 , Issue.5 , pp. 1464-1473
    • Hu, Z.1    Jiang, J.2    Rajagopalan, R.3
  • 16
    • 77049090450 scopus 로고    scopus 로고
    • Concentration and crowding effects on protein stability from a coarse-grained model
    • in, edited by M. H. Zaman (Cambridge University Press, Cambridge).
    • J. K. Cheung, V. K. Shen, J. R. Errington, and T. M. Truskett, Concentration and crowding effects on protein stability from a coarse-grained model., in Statistical Mechanics of Cellular Systems and Processes, edited by, M. H. Zaman, (Cambridge University Press, Cambridge, 2009).
    • (2009) Statistical Mechanics of Cellular Systems and Processes
    • Cheung, J.K.1    Shen, V.K.2    Errington, J.R.3    Truskett, T.M.4
  • 21
    • 77049106311 scopus 로고    scopus 로고
    • 10.1016/j.bpj.2009.10.009
    • J. Mittal and R. B. Best, Biophys. J. 98, 315 (2010). 10.1016/j.bpj.2009.10.009
    • (2010) Biophys. J. , vol.98 , pp. 315
    • Mittal, J.1    Best, R.B.2
  • 23
    • 77950158041 scopus 로고    scopus 로고
    • 10.1103/PhysRevE.81.031919
    • S. Qin and H. X. Zhou, Phys. Rev. E 81, 031919 (2010). 10.1103/PhysRevE.81.031919
    • (2010) Phys. Rev. e , vol.81 , pp. 031919
    • Qin, S.1    Zhou, H.X.2
  • 27
    • 0017667829 scopus 로고
    • Thermodynamics of gelation of sickle cell deoxyhemoglobin
    • DOI 10.1016/0022-2836(77)90093-6
    • P. D. Ross, J. Hofrichter, and W. A. Eaton, J. Mol. Biol. 115, 111 (1977). 10.1016/0022-2836(77)90093-6 (Pubitemid 8198713)
    • (1977) Journal of Molecular Biology , vol.115 , Issue.2 , pp. 111-134
    • Ross, P.D.1    Hofrichter, J.2    Eaton, W.A.3
  • 30
    • 0032311227 scopus 로고    scopus 로고
    • Molecular crowding: Analysis of effects of high concentrations of inert cosolutes on biochemical equilibria and rates in terms of volume exclusion
    • DOI 10.1016/S0076-6879(98)95038-8
    • A. P. Minton, Method. Enzymol. 295, 127 (1998). 10.1016/S0076-6879(98) 95038-8 (Pubitemid 29349912)
    • (1998) Methods in Enzymology , vol.295 , pp. 127-149
    • Minton, A.P.1
  • 31
    • 4544278751 scopus 로고    scopus 로고
    • Protein folding and binding in confined spaces and in crowded solutions
    • DOI 10.1002/jmr.711, EMBO Workshop on Biological Implications of Macromolecular Crowding
    • H.-X. Zhou, J. Mol. Recognit. 17, 368 (2004). 10.1002/jmr.711 (Pubitemid 39218978)
    • (2004) Journal of Molecular Recognition , vol.17 , Issue.5 , pp. 368-375
    • Zhou, H.-X.1
  • 32
    • 37549009571 scopus 로고    scopus 로고
    • 10.1016/j.jmb.2007.11.063
    • Y. C. Kim and G. Hummer, J. Mol. Biol. 375, 1416 (2008). 10.1016/j.jmb.2007.11.063
    • (2008) J. Mol. Biol. , vol.375 , pp. 1416
    • Kim, Y.C.1    Hummer, G.2
  • 36
    • 0029919190 scopus 로고    scopus 로고
    • Residue-residue potentials with a favorable contact pair term and an unfavorable high packing density term, for simulation and threading
    • DOI 10.1006/jmbi.1996.0114
    • S. Miyazawa and R. L. Jernigan, J. Mol. Biol. 256, 623 (1996). 10.1006/jmbi.1996.0114 (Pubitemid 26107211)
    • (1996) Journal of Molecular Biology , vol.256 , Issue.3 , pp. 623-644
    • Miyazawa, S.1    Jernigan, R.L.2
  • 37
    • 51349126098 scopus 로고    scopus 로고
    • 10.1002/prot.22111
    • H.-X. Zhou, Proteins 72, 1109 (2008). 10.1002/prot.22111
    • (2008) Proteins , vol.72 , pp. 1109
    • Zhou, H.-X.1
  • 38
    • 33750806263 scopus 로고    scopus 로고
    • Mixed Macromolecular Crowding Accelerates the Refolding of Rabbit Muscle Creatine Kinase: Implications for Protein Folding in Physiological Environments
    • DOI 10.1016/j.jmb.2006.09.018, PII S0022283606012071
    • F. Du, Z. Zhou, Z. Y. Mo, J. Z. Shi, J. Chen, and Y. Liang, J. Mol. Biol. 364, 469 (2006). 10.1016/j.jmb.2006.09.018 (Pubitemid 44715934)
    • (2006) Journal of Molecular Biology , vol.364 , Issue.3 , pp. 469-482
    • Du, F.1    Zhou, Z.2    Mo, Z.-Y.3    Shi, J.-Z.4    Chen, J.5    Liang, Y.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.