메뉴 건너뛰기




Volumn 5, Issue , 2013, Pages

RNA modularity for synthetic biology

Author keywords

[No Author keywords available]

Indexed keywords

RNA;

EID: 84887839634     PISSN: None     EISSN: 20517599     Source Type: Journal    
DOI: 10.12703/P5-46     Document Type: Article
Times cited : (30)

References (158)
  • 1
    • 78649985789 scopus 로고    scopus 로고
    • The emerging field of RNA nanotechnology
    • Guo P: The emerging field of RNA nanotechnology. Nat Nanotechnol 2010, 5:833-42.
    • (2010) Nat Nanotechnol , vol.5 , pp. 833-842
    • Guo, P.1
  • 2
    • 79952487130 scopus 로고    scopus 로고
    • Clinical developments in nanotechnology for cancer therapy
    • Heidel JD, Davis ME: Clinical developments in nanotechnology for cancer therapy. Pharm Res 2011, 28:187-99.
    • (2011) Pharm Res , vol.28 , pp. 187-199
    • Heidel, J.D.1    Davis, M.E.2
  • 6
    • 79551632441 scopus 로고    scopus 로고
    • Application of phi29 motor pRNA for targeted therapeutic delivery of siRNA silencing metallothionein-IIA and survivin in ovarian cancers
    • Tarapore P, Shu Y, Guo P, Ho S: Application of phi29 motor pRNA for targeted therapeutic delivery of siRNA silencing metallothionein-IIA and survivin in ovarian cancers. Mol Ther 2011, 19:386-94.
    • (2011) Mol Ther , vol.19 , pp. 386-394
    • Tarapore, P.1    Shu, Y.2    Guo, P.3    Ho, S.4
  • 7
    • 79960697001 scopus 로고    scopus 로고
    • Organization of intracellular reactions with rationally designed RNA assemblies
    • Delebecque CJ, Lindner AB, Silver PA, Aldaye FA: Organization of intracellular reactions with rationally designed RNA assemblies. Science 2011, 333:470-4.
    • (2011) Science , vol.333 , pp. 470-474
    • Delebecque, C.J.1    Lindner, A.B.2    Silver, P.A.3    Aldaye, F.A.4
  • 8
    • 79960959180 scopus 로고    scopus 로고
    • RNA mimics of green fluorescent protein
    • Paige JS, Wu KY, Jaffrey SR: RNA mimics of green fluorescent protein. Science 2011, 333:642-6.
    • (2011) Science , vol.333 , pp. 642-646
    • Paige, J.S.1    Wu, K.Y.2    Jaffrey, S.R.3
  • 9
    • 84858793517 scopus 로고    scopus 로고
    • Self-assembled RNA interference microsponges for efficient siRNA delivery
    • Lee JB, Hong J, Bonner DK, Poon Z, Hammond PT: Self-assembled RNA interference microsponges for efficient siRNA delivery. Nat Mater 2012, 11:316-22.
    • (2012) Nat Mater , vol.11 , pp. 316-322
    • Lee, J.B.1    Hong, J.2    Bonner, D.K.3    Poon, Z.4    Hammond, P.T.5
  • 11
    • 77953681445 scopus 로고    scopus 로고
    • Unraveling the structure of the ribosome (Nobel Lecture)
    • Ramakrishnan V: Unraveling the structure of the ribosome (Nobel Lecture). Angew Chem Int Ed Engl 2010, 49:4355-80.
    • (2010) Angew Chem Int Ed Engl , vol.49 , pp. 4355-4380
    • Ramakrishnan, V.1
  • 12
    • 77953663699 scopus 로고    scopus 로고
    • From the structure and function of the ribosome to new antibiotics (Nobel Lecture)
    • Steitz TA: From the structure and function of the ribosome to new antibiotics (Nobel Lecture). Angew Chem Int Ed Engl 2010, 49:4381-98.
    • (2010) Angew Chem Int Ed Engl , vol.49 , pp. 4381-4398
    • Steitz, T.A.1
  • 13
    • 77953682688 scopus 로고    scopus 로고
    • Polar bears, antibiotics, and the evolving ribosome (Nobel Lecture)
    • Yonath A: Polar bears, antibiotics, and the evolving ribosome (Nobel Lecture). Angew Chem Int Ed Engl 2010, 49:4341-54.
    • (2010) Angew Chem Int Ed Engl , vol.49 , pp. 4341-4354
    • Yonath, A.1
  • 14
    • 0032546728 scopus 로고    scopus 로고
    • Derivation of the three-dimensional architecture of bacterial ribonuclease P RNAs from comparative sequence analysis
    • DOI 10.1006/jmbi.1998.1797
    • Massire C, Jaeger L, Westhof E: Derivation of the threedimensional architecture of bacterial ribonuclease P RNAs from comparative sequence analysis. J Mol Biol 1998, 279:773-93. (Pubitemid 28284694)
    • (1998) Journal of Molecular Biology , vol.279 , Issue.4 , pp. 773-793
    • Massire, C.1    Jaeger, L.2    Westhof, E.3
  • 16
    • 0027433710 scopus 로고
    • Monitoring of the cooperative unfolding of the sunY group I intron of bacteriophage T4. The active form of the sunY ribozyme is stabilized by multiple interactions with 3' terminal intron components
    • DOI 10.1006/jmbi.1993.1590
    • Jaeger L, Westhof E, Michel F: Monitoring of the cooperative unfolding of the sunY group I intron of bacteriophage T4. The active form of the sunY ribozyme is stabilized by multiple interactions with 3' terminal intron components. J Mol Biol 1993, 234:331-46. (Pubitemid 23361205)
    • (1993) Journal of Molecular Biology , vol.234 , Issue.2 , pp. 331-346
    • Jaeger, L.1    Westhof, E.2    Michel, F.3
  • 17
    • 0030452773 scopus 로고    scopus 로고
    • New loop-loop tertiary interactions in self-splicing introns of subgroup IC and ID: A complete 3d model of the Tetrahymena thermophila ribozyme
    • Lehnert V, Jaeger L, Michel F, Westhof E: New loop-loop tertiary interactions in self-splicing introns of subgroup IC and ID: a complete 3D model of the Tetrahymena thermophila ribozyme. Chem Biol 1996, 3:993-1009. (Pubitemid 27058823)
    • (1996) Chemistry and Biology , vol.3 , Issue.12 , pp. 993-1009
    • Lehnert, V.1    Jaeger, L.2    Michel, F.3    Westhof, E.4
  • 19
    • 33744797086 scopus 로고    scopus 로고
    • RNA splicing: Group I intron crystal structures reveal the basis of splice site selection and metal ion catalysis
    • DOI 10.1016/j.sbi.2006.04.005, PII S0959440X06000698
    • Stahley MR, Strobel SA: RNA splicing: group I intron crystal structures reveal the basis of splice site selection and metal ion catalysis. Curr Opin Struct Biol 2006, 16:319-26. (Pubitemid 43831643)
    • (2006) Current Opinion in Structural Biology , vol.16 , Issue.3 , pp. 319-326
    • Stahley, M.R.1    Strobel, S.A.2
  • 20
    • 33749672830 scopus 로고    scopus 로고
    • Organization of Core Spliceosomal Components U5 snRNA Loop I and U4/U6 Di-snRNP within U4/U6.U5 Tri-snRNP as Revealed by Electron Cryomicroscopy
    • DOI 10.1016/j.molcel.2006.08.021, PII S1097276506006034
    • Sander B, Golas MM, Makarov EM, Brahms H, Kastner B, Lührmann R, Stark H: Organization of core spliceosomal components U5 snRNA loop I and U4/U6 Di-snRNP within U4/U6.U5 TrisnRNP as revealed by electron cryomicroscopy. Mol Cell 2006, 24:267-78. (Pubitemid 44557125)
    • (2006) Molecular Cell , vol.24 , Issue.2 , pp. 267-278
    • Sander, B.1    Golas, M.M.2    Makarov, E.M.3    Brahms, H.4    Kastner, B.5    Luhrmann, R.6    Stark, H.7
  • 23
    • 33746655784 scopus 로고    scopus 로고
    • The architectonics of programmable RNA and DNA nanostructures
    • DOI 10.1016/j.sbi.2006.07.001, PII S0959440X06001187
    • Jaeger L, Chworos A: The architectonics of programmable RNA and DNA nanostructures. Curr Opin Struct Biol 2006, 16:531-43. (Pubitemid 44149075)
    • (2006) Current Opinion in Structural Biology , vol.16 , Issue.4 , pp. 531-543
    • Jaeger, L.1    Chworos, A.2
  • 24
    • 84865297453 scopus 로고    scopus 로고
    • Synthetic biology with RNA: Progress report
    • Benenson Y: Synthetic biology with RNA: progress report. Curr Opin Chem Biol 2012, 16:278-84.
    • (2012) Curr Opin Chem Biol , vol.16 , pp. 278-284
    • Benenson, Y.1
  • 26
    • 56949084712 scopus 로고    scopus 로고
    • Synthetic biology with RNA motifs
    • Saito H, Inoue T: Synthetic biology with RNA motifs. Int J Biochem Cell Biol 2009, 41:398-404.
    • (2009) Int J Biochem Cell Biol , vol.41 , pp. 398-404
    • Saito, H.1    Inoue, T.2
  • 27
    • 80052975908 scopus 로고    scopus 로고
    • Engineering biological systems with synthetic RNA molecules
    • Liang JC, Bloom RJ, Smolke CD: Engineering biological systems with synthetic RNA molecules. Mol Cell 2011, 43:915-26.
    • (2011) Mol Cell , vol.43 , pp. 915-926
    • Liang, J.C.1    Bloom, R.J.2    Smolke, C.D.3
  • 28
    • 77952876523 scopus 로고    scopus 로고
    • RNA-mediated regulation in bacteria: From natural to artificial systems
    • Lioliou E, Romilly C, Romby P, Fechter P: RNA-mediated regulation in bacteria: from natural to artificial systems. N Biotechnol 2010, 27:222-35.
    • (2010) N Biotechnol , vol.27 , pp. 222-235
    • Lioliou, E.1    Romilly, C.2    Romby, P.3    Fechter, P.4
  • 29
    • 84255189090 scopus 로고    scopus 로고
    • The molecular interactions that stabilize RNA tertiary structure: RNA motifs, patterns, and networks
    • Butcher SE, Pyle AM: The molecular interactions that stabilize RNA tertiary structure: RNA motifs, patterns, and networks. Acc Chem Res 2011, 44:1302-11.
    • (2011) Acc Chem Res , vol.44 , pp. 1302-1311
    • Butcher, S.E.1    Pyle, A.M.2
  • 30
    • 84882622399 scopus 로고    scopus 로고
    • Modularity of select riboswitch expression platforms enables facile engineering of novel genetic regulatory devices
    • Ceres P, Garst AD, Marcano-Velázquez JG, Batey RT: Modularity of select riboswitch expression platforms enables facile engineering of novel genetic regulatory devices. ACS Synth Biol 2013, 2:463-72.
    • (2013) ACS Synth Biol , vol.2 , pp. 463-472
    • Ceres, P.1    Garst, A.D.2    Marcano-Velázquez, J.G.3    Batey, R.T.4
  • 31
    • 79957700542 scopus 로고    scopus 로고
    • Versatile RNAsensing transcriptional regulators for engineering genetic networks
    • Lucks JB, Qi L, Mutalik VK, Wang D, Arkin AP: Versatile RNAsensing transcriptional regulators for engineering genetic networks. Proc Natl Acad Sci USA 2011, 108:8617-22.
    • (2011) Proc Natl Acad Sci USA , vol.108 , pp. 8617-8622
    • Lucks, J.B.1    Qi, L.2    Mutalik, V.K.3    Wang, D.4    Arkin, A.P.5
  • 32
    • 80053019485 scopus 로고    scopus 로고
    • Regulation by small RNAs in bacteria: Expanding frontiers
    • Storz G, Vogel J, Wassarman KM: Regulation by small RNAs in bacteria: expanding frontiers. Mol Cell 2011, 43:880-91.
    • (2011) Mol Cell , vol.43 , pp. 880-891
    • Storz, G.1    Vogel, J.2    Wassarman, K.M.3
  • 34
    • 84866559567 scopus 로고    scopus 로고
    • De novo automated design of small RNA circuits for engineering synthetic riboregulation in living cells
    • Rodrigo G, Landrain TE, Jaramillo A: De novo automated design of small RNA circuits for engineering synthetic riboregulation in living cells. Proc Natl Acad Sci USA 2012, 109:15271-6.
    • (2012) Proc Natl Acad Sci USA , vol.109 , pp. 15271-15276
    • Rodrigo, G.1    Landrain, T.E.2    Jaramillo, A.3
  • 35
    • 84867552073 scopus 로고    scopus 로고
    • Three-dimensionally designed protein-responsive RNA devices for cell signaling regulation
    • Kashida S, Inoue T, Saito H: Three-dimensionally designed protein-responsive RNA devices for cell signaling regulation. Nucleic Acids Res 2012, 40:9369-78.
    • (2012) Nucleic Acids Res , vol.40 , pp. 9369-9378
    • Kashida, S.1    Inoue, T.2    Saito, H.3
  • 36
    • 84863617223 scopus 로고    scopus 로고
    • Engineered riboswitches: Expanding researchers' toolbox with synthetic RNA regulators
    • Wittmann A, Suess B: Engineered riboswitches: Expanding researchers' toolbox with synthetic RNA regulators. FEBS Lett 2012, 586:2076-83.
    • (2012) FEBS Lett , vol.586 , pp. 2076-2083
    • Wittmann, A.1    Suess, B.2
  • 37
    • 84874067724 scopus 로고    scopus 로고
    • The GA-minor submotif as a case study of RNA modularity, prediction, and design
    • Grabow WW, Zhuang Z, Shea J, Jaeger L: The GA-minor submotif as a case study of RNA modularity, prediction, and design. Wiley Interdiscip Rev RNA 2013, 4:181-203.
    • (2013) Wiley Interdiscip Rev RNA , vol.4 , pp. 181-203
    • Grabow, W.W.1    Zhuang, Z.2    Shea, J.3    Jaeger, L.4
  • 38
    • 58549119994 scopus 로고    scopus 로고
    • The UA-handle: A versatile submotif in stable RNA architectures
    • Jaeger L, Verzemnieks EJ, Geary C: The UA-handle: a versatile submotif in stable RNA architectures. Nucleic Acids Res 2009, 37:215-30.
    • (2009) Nucleic Acids Res , vol.37 , pp. 215-230
    • Jaeger, L.1    Verzemnieks, E.J.2    Geary, C.3
  • 39
    • 79954610188 scopus 로고    scopus 로고
    • Design of small molecule-responsive microRNAs based on structural requirements for Drosha processing
    • Beisel CL, Chen YY, Culler SJ, Hoff KG, Smolke CD: Design of small molecule-responsive microRNAs based on structural requirements for Drosha processing. Nucleic Acids Res 2011, 39:2981-94.
    • (2011) Nucleic Acids Res , vol.39 , pp. 2981-2994
    • Beisel, C.L.1    Chen, Y.Y.2    Culler, S.J.3    Hoff, K.G.4    Smolke, C.D.5
  • 42
    • 0034697987 scopus 로고    scopus 로고
    • Predicting U-turns in ribosomal RNA with comparative sequence analysis
    • Gutell RR, Cannone JJ, Konings D, Gautheret D: Predicting U-turns in ribosomal RNA with comparative sequence analysis. J Mol Biol 2000, 300:791-803.
    • (2000) J Mol Biol , vol.300 , pp. 791-803
    • Gutell, R.R.1    Cannone, J.J.2    Konings, D.3    Gautheret, D.4
  • 43
    • 78649986714 scopus 로고    scopus 로고
    • Promoting RNA helical stacking via A-minor junctions
    • Geary C, Chworos A, Jaeger L: Promoting RNA helical stacking via A-minor junctions. Nucleic Acids Res 2011, 39:1066-80
    • (2011) Nucleic Acids Res , vol.39 , pp. 1066-1080
    • Geary, C.1    Chworos, A.2    Jaeger, L.3
  • 45
    • 0036314898 scopus 로고    scopus 로고
    • Sequence and structural conservation in RNA ribose zippers
    • DOI 10.1016/S0022-2836(02)00515-6
    • Tamura M, Holbrook SR: Sequence and structural conservation in RNA ribose zippers. J Mol Biol 2002, 320:455-74. (Pubitemid 34753974)
    • (2002) Journal of Molecular Biology , vol.320 , Issue.3 , pp. 455-474
    • Tamura, M.1    Holbrook, S.R.2
  • 46
    • 0037258776 scopus 로고    scopus 로고
    • The lonepair triloop: A new motif in RNA structure
    • DOI 10.1016/S0022-2836(02)01106-3
    • Lee JC, Cannone JJ, Gutell RR: The lonepair triloop: a new motif in RNA structure. J Mol Biol 2003, 325:65-83. (Pubitemid 36152998)
    • (2003) Journal of Molecular Biology , vol.325 , Issue.1 , pp. 65-83
    • Lee, J.C.1    Cannone, J.J.2    Gutell, R.R.3
  • 47
    • 34548342932 scopus 로고    scopus 로고
    • A comparative analysis of the triloops in all high-resolution RNA structures reveals sequence-structure relationships
    • DOI 10.1261/rna.597507
    • Lisi V, Major F: A comparative analysis of the triloops in all high-resolution RNA structures reveals sequence structure relationships. RNA 2007, 13:1537-45. (Pubitemid 47347424)
    • (2007) RNA , vol.13 , Issue.9 , pp. 1537-1545
    • Lisi, V.1    Major, F.2
  • 48
    • 0345531092 scopus 로고    scopus 로고
    • The common and the distinctive features of the bulged-G motif based on a 1.04 Å resolution RNA structure
    • DOI 10.1093/nar/gkg908
    • Correll CC, Beneken J, Plantinga MJ, Lubbers M, Chan Y: The common and the distinctive features of the bulged-G motif based on a 1.04 A resolution RNA structure. Nucleic Acids Res 2003, 31:6806-18. (Pubitemid 37508788)
    • (2003) Nucleic Acids Research , vol.31 , Issue.23 , pp. 6806-6818
    • Correll, C.C.1    Beneken, J.2    Plantinga, M.J.3    Lubbers, M.4    Chan, Y.-L.5
  • 49
    • 0036760665 scopus 로고    scopus 로고
    • Motif prediction in ribosomal RNAs: Lessons and prospects for automated motif prediction in homologous RNA molecules
    • DOI 10.1016/S0300-9084(02)01463-3, PII S0300908402014633
    • Leontis NB, Stombaugh J, Westhof E: Motif prediction in ribosomal RNAs Lessons and prospects for automated motif prediction in homologous RNA molecules. Biochimie 2002, 84:961-73. (Pubitemid 35422922)
    • (2002) Biochimie , vol.84 , Issue.9 , pp. 961-973
    • Leontis, N.B.1    Stombaugh, J.2    Westhof, E.3
  • 50
    • 0038475947 scopus 로고    scopus 로고
    • On the occurrence of the T-loop RNA folding motif in large RNA molecules
    • DOI 10.1261/rna.2202703
    • Krasilnikov AS, Mondragón A: On the occurrence of the T-loop RNA folding motif in large RNA molecules. RNA 2003, 9:640-3. (Pubitemid 36618191)
    • (2003) RNA , vol.9 , Issue.6 , pp. 640-643
    • Krasilnikov, A.S.1    Mondragon, A.2
  • 51
    • 0036717041 scopus 로고    scopus 로고
    • Frequent occurrence of the T-loop RNA folding motif in ribosomal RNAs
    • DOI 10.1017/S135583820202006X
    • Nagaswamy U, Fox GE: Frequent occurrence of the T-loop RNA folding motif in ribosomal RNAs. RNA 2002, 8:1112-9. (Pubitemid 35024567)
    • (2002) RNA , vol.8 , Issue.9 , pp. 1112-1119
    • Nagaswamy, U.1    Fox, G.E.2
  • 52
    • 2942615089 scopus 로고    scopus 로고
    • The roles of ribosomal proteins in the structure assembly, and evolution of the large ribosomal subunit
    • DOI 10.1016/j.jmb.2004.03.076, PII S0022283604003845
    • Klein DJ, Moore PB, Steitz TA: The roles of ribosomal proteins in the structure assembly, and evolution of the large ribosomal subunit. J Mol Biol 2004, 340:141-77. (Pubitemid 38739442)
    • (2004) Journal of Molecular Biology , vol.340 , Issue.1 , pp. 141-177
    • Klein, D.J.1    Moore, P.B.2    Steitz, T.A.3
  • 53
    • 33646357500 scopus 로고    scopus 로고
    • RNA Kink-Turns as Molecular Elbows: Hydration, Cation Binding, and Large-Scale Dynamics
    • DOI 10.1016/j.str.2006.02.012, PII S096921260600178X
    • Rázga F, Zacharias M, Réblová K, Koca J, Sponer J: RNA kink-turns as molecular elbows: hydration, cation binding, and largescale dynamics. Structure 2006, 14:825-35. (Pubitemid 43674100)
    • (2006) Structure , vol.14 , Issue.5 , pp. 825-835
    • Razga, F.1    Zacharias, M.2    Reblova, K.3    Koca, J.4    Sponer, J.5
  • 54
    • 0037273378 scopus 로고    scopus 로고
    • The crystal structure of a 26-nucleotide RNA containing a hook-turn
    • DOI 10.1261/rna.2107303
    • Szép S,Wang J, Moore PB: The crystal structure of a 26-nucleotide RNA containing a hook-turn. RNA 2003, 9:44-51. (Pubitemid 36206301)
    • (2003) RNA , vol.9 , Issue.1 , pp. 44-51
    • Szep, S.1    Wang, J.2    Moore, P.B.3
  • 55
    • 13544255744 scopus 로고    scopus 로고
    • The identification of novel RNA structural motifs using COMPADRES: An automated approach to structural discovery
    • DOI 10.1093/nar/gkh1002
    • Wadley LM, Pyle AM: The identification of novel RNA structural motifs using COMPADRES: an automated approach to structural discovery. Nucleic Acids Res 2004, 32:6650-9. (Pubitemid 40220377)
    • (2004) Nucleic Acids Research , vol.32 , Issue.22 , pp. 6650-6659
    • Wadley, L.M.1    Pyle, A.M.2
  • 56
    • 33947729952 scopus 로고    scopus 로고
    • G-ribo: A new structural motif in ribosomal RNA
    • DOI 10.1261/rna.387107
    • Steinberg SV, Boutorine YI: G-ribo: a new structural motif in ribosomal RNA. RNA 2007, 13:549-54. (Pubitemid 46506937)
    • (2007) RNA , vol.13 , Issue.4 , pp. 549-554
    • Steinberg, S.V.1    Boutorine, Y.I.2
  • 57
    • 29844453234 scopus 로고    scopus 로고
    • Topology of three-way junctions in folded RNAs
    • DOI 10.1261/rna.2208106
    • Lescoute A, Westhof E: Topology of three-way junctions in folded RNAs. RNA 2006, 12:83-93. (Pubitemid 43037456)
    • (2006) RNA , vol.12 , Issue.1 , pp. 83-93
    • Lescoute, A.1    Westhof, E.2
  • 58
    • 67449103067 scopus 로고    scopus 로고
    • Analysis of four-way junctions in RNA structures
    • Laing C, Schlick T: Analysis of four-way junctions in RNA structures. J Mol Biol 2009, 390:547-59.
    • (2009) J Mol Biol , vol.390 , pp. 547-559
    • Laing, C.1    Schlick, T.2
  • 59
    • 84868214921 scopus 로고    scopus 로고
    • The right angle (RA) motif: A prevalent ribosomal RNA structural pattern found in group i introns
    • Grabow WW, Zhuang Z, Swank ZN, Shea J, Jaeger L: The right angle (RA) motif: a prevalent ribosomal RNA structural pattern found in group I introns. J Mol Biol 2012, 424:54-67.
    • (2012) J Mol Biol , vol.424 , pp. 54-67
    • Grabow, W.W.1    Zhuang, Z.2    Swank, Z.N.3    Shea, J.4    Jaeger, L.5
  • 60
    • 0035184520 scopus 로고    scopus 로고
    • Crystal structures of coaxially stacked kissing complexes of the HIV-1 RNA dimerization initiation site
    • DOI 10.1038/nsb727
    • Ennifar E, Walter P, Ehresmann B, Ehresmann C, Dumas P: Crystal structures of coaxially stacked kissing complexes of the HIV-1 RNA dimerization initiation site. Nat Struct Biol 2001, 8:1064-8. (Pubitemid 33101628)
    • (2001) Nature Structural Biology , vol.8 , Issue.12 , pp. 1064-1068
    • Ennifar, E.1    Walter, P.2    Ehresmann, B.3    Ehresmann, C.4    Dumas, P.5
  • 61
    • 0036761417 scopus 로고    scopus 로고
    • RNA loop-loop interactions as dynamic functional motifs
    • DOI 10.1016/S0300-9084(02)01401-3, PII S0300908402014013
    • Brunel C, Marquet R, Romby P, Ehresmann C: RNA loop-loop interactions as dynamic functional motifs. Biochimie 2002, 84:925-44. (Pubitemid 35422919)
    • (2002) Biochimie , vol.84 , Issue.9 , pp. 925-944
    • Brunel, C.1    Marquet, R.2    Romby, P.3    Ehresmann, C.4
  • 62
    • 0036071391 scopus 로고    scopus 로고
    • GU receptors of double helices mediate tRNA movement in the ribosome
    • DOI 10.1017/S135583820202602X
    • Gagnon MG, Steinberg SV: GU receptors of double helices mediate tRNA movement in the ribosome. RNA 2002, 8:873-7. (Pubitemid 34787684)
    • (2002) RNA , vol.8 , Issue.7 , pp. 873-877
    • Gagnon, M.G.1    Steinberg, S.V.2
  • 63
    • 33645006571 scopus 로고    scopus 로고
    • Structural and evolutionary classification of G/U wobble basepairs in the ribosome
    • Mokdad A, Krasovska MV, Sponer J, Leontis NB: Structural and evolutionary classification of G/U wobble basepairs in the ribosome. Nucleic Acids Res 2006, 34:1326-41.
    • (2006) Nucleic Acids Res , vol.34 , pp. 1326-1341
    • Mokdad, A.1    Krasovska, M.V.2    Sponer, J.3    Leontis, N.B.4
  • 64
    • 0030959348 scopus 로고    scopus 로고
    • Rules for RNA recognition of GNRA tetraloops deduced by vitro selection: Comparison with in vivo evolution
    • DOI 10.1093/emboj/16.11.3289
    • Costa M, Michel F: Rules for RNA recognition of GNRA tetraloops deduced by in vitro selection: comparison with in vivo evolution. EMBO J 1997, 16:3289-302. (Pubitemid 27234966)
    • (1997) EMBO Journal , vol.16 , Issue.11 , pp. 3289-3302
    • Costa, M.1    Michel, F.2
  • 65
    • 40249103230 scopus 로고    scopus 로고
    • Comprehensive features of natural and in vitro selected GNRA tetraloop-binding receptors
    • DOI 10.1093/nar/gkm1048
    • Geary C, Baudrey S, Jaeger L: Comprehensive features of natural and in vitro selected GNRA tetraloop-binding receptors. Nucleic Acids Res 2008, 36:1138-52. (Pubitemid 351330932)
    • (2008) Nucleic Acids Research , vol.36 , Issue.4 , pp. 1138-1152
    • Geary, C.1    Baudrey, S.2    Jaeger, L.3
  • 66
    • 22744455135 scopus 로고    scopus 로고
    • Pseudoknots: RNA structures with diverse functions
    • Staple DW, Butcher SE: Pseudoknots: RNA structures with diverse functions. PLoS Biol 2005, 3:e213.
    • (2005) PLoS Biol , vol.3
    • Staple, D.W.1    Butcher, S.E.2
  • 67
    • 34250815810 scopus 로고    scopus 로고
    • G-ribo motif favors the formation of pseudoknots in ribosomal RNA
    • DOI 10.1261/rna.495207
    • Steinberg SV, Boutorine YI: G-ribo motif favors the formation of pseudoknots in ribosomal RNA. RNA 2007, 13:1036-42. (Pubitemid 46984894)
    • (2007) RNA , vol.13 , Issue.7 , pp. 1036-1042
    • Steinberg, S.V.1    Boutorine, Y.I.2
  • 70
    • 84868559037 scopus 로고    scopus 로고
    • Synconjugation, and labeling of multifunctional pRNA nanoparticles for specific delivery of siRNA, drugs, and other therapeutics to target cells
    • Guo P, Shu Y, Binzel D, Cinier M: Synthesis, conjugation, and labeling of multifunctional pRNA nanoparticles for specific delivery of siRNA, drugs, and other therapeutics to target cells. Methods Mol Biol 2012, 928:197-219.
    • (2012) Methods Mol Biol , vol.928 , pp. 197-219
    • Guo, P.1    Shu, Y.2    Binzel, D.3    Cinier, M.4
  • 74
    • 0034679465 scopus 로고    scopus 로고
    • Tecto-RNA: One-dimensional self-assembly through tertiary interactions this work was carried out in strasbourg with the support of grants to N.B.L. from the NIH (1R15 GM55898) and the NIH Fogarty Institute (1-F06- TW02251-01) and the support of the CNRS to L.J
    • The authors wish to thank Eric Westhof for his support and encouragement of this work
    • Jaeger, Leontis: Tecto-RNA: One-Dimensional Self-Assembly through Tertiary Interactions This work was carried out in Strasbourg with the support of grants to N.B.L. from the NIH (1R15 GM55898) and the NIH Fogarty Institute (1-F06- TW02251-01) and the support of the CNRS to L.J. The authors wish to thank Eric Westhof for his support and encouragement of this work. Angew Chem Int Ed Engl 2000, 39:2521-4.
    • (2000) Angew Chem Int Ed Engl , vol.39 , pp. 2521-2524
    • Jaeger, L.1
  • 77
    • 84863365893 scopus 로고    scopus 로고
    • Attenuation of loopreceptor interactions with pseudoknot formation
    • Afonin KA, Lin Y, Calkins ER, Jaeger L: Attenuation of loopreceptor interactions with pseudoknot formation. Nucleic Acids Res 2012, 40:2168-80.
    • (2012) Nucleic Acids Res , vol.40 , pp. 2168-2180
    • Afonin, K.A.1    Lin, Y.2    Calkins, E.R.3    Jaeger, L.4
  • 78
    • 79958738880 scopus 로고    scopus 로고
    • Use of RNA structure flexibility data in nanostructure modeling
    • Kasprzak W, Bindewald E, Kim T, Jaeger L, Shapiro BA: Use of RNA structure flexibility data in nanostructure modeling. Methods 2011, 54:239-50.
    • (2011) Methods , vol.54 , pp. 239-250
    • Kasprzak, W.1    Bindewald, E.2    Kim, T.3    Jaeger, L.4    Shapiro, B.A.5
  • 79
    • 84555177452 scopus 로고    scopus 로고
    • Multistrand RNA secondary structure prediction and nanostructure design including pseudoknots
    • Bindewald E, Afonin K, Jaeger L, Shapiro BA: Multistrand RNA secondary structure prediction and nanostructure design including pseudoknots. ACS Nano 2011, 5:9542-51.
    • (2011) ACS Nano , vol.5 , pp. 9542-9551
    • Bindewald, E.1    Afonin, K.2    Jaeger, L.3    Shapiro, B.A.4
  • 81
    • 84860907410 scopus 로고    scopus 로고
    • Downward causation by information control in micro-organisms
    • Jaeger L, Calkins ER: Downward causation by information control in micro-organisms. Interface Focus 2012, 2:26-41.
    • (2012) Interface Focus , vol.2 , pp. 26-41
    • Jaeger, L.1    Calkins, E.R.2
  • 82
    • 49949099252 scopus 로고    scopus 로고
    • Top-down causation by information control: From a philosophical problem to a scientific research programme
    • Auletta G, Ellis GFR, Jaeger L: Top-down causation by information control: from a philosophical problem to a scientific research programme. J R Soc Interface 2008, 5:1159-72.
    • (2008) J R Soc Interface , vol.5 , pp. 1159-1172
    • Auletta, G.1    Ellis, G.F.R.2    Jaeger, L.3
  • 84
    • 84900062238 scopus 로고    scopus 로고
    • RNA aptamers: A review of recent trends and applications
    • Kang K, Lee Y: RNA aptamers: a review of recent trends and applications. Adv Biochem Eng Biotechnol 2013, 131:153-69.
    • (2013) Adv Biochem Eng Biotechnol , vol.131 , pp. 153-169
    • Kang, K.1    Lee, Y.2
  • 86
    • 34249672905 scopus 로고    scopus 로고
    • Ribozyme catalysis of metabolism in the RNA world
    • DOI 10.1002/cbdv.200790055
    • Chen X, Li N, Ellington AD: Ribozyme catalysis of metabolism in the RNA world. Chem Biodivers 2007, 4:633-55. (Pubitemid 46930029)
    • (2007) Chemistry and Biodiversity , vol.4 , Issue.4 , pp. 633-655
    • Chen, X.1    Li, N.2    Ellington, A.D.3
  • 87
    • 0030996755 scopus 로고    scopus 로고
    • The new world of ribozymes
    • DOI 10.1016/S0959-440X(97)80047-4
    • Jaeger L: The New World of ribozymes. Curr Opin Struct Biol 1997, 7:324-35. (Pubitemid 27281400)
    • (1997) Current Opinion in Structural Biology , vol.7 , Issue.3 , pp. 324-335
    • Jaeger, L.1
  • 88
    • 77957143552 scopus 로고    scopus 로고
    • Genomic SELEX: A discovery tool for genomic aptamers
    • Zimmermann B, Bilusic I, Lorenz C, Schroeder R: Genomic SELEX: a discovery tool for genomic aptamers. Methods 2010, 52:125-32.
    • (2010) Methods , vol.52 , pp. 125-132
    • Zimmermann, B.1    Bilusic, I.2    Lorenz, C.3    Schroeder, R.4
  • 90
    • 84876066418 scopus 로고    scopus 로고
    • An in vitro-selected RNA receptor for the GAAC loop: Modular receptor for non-GNRA-type tetraloop
    • Ishikawa J, Furuta H, Ikawa Y: An in vitro-selected RNA receptor for the GAAC loop: modular receptor for non-GNRA-type tetraloop. Nucleic Acids Res 2013, 41:3748-59.
    • (2013) Nucleic Acids Res , vol.41 , pp. 3748-3759
    • Ishikawa, J.1    Furuta, H.2    Ikawa, Y.3
  • 94
    • 46349083026 scopus 로고    scopus 로고
    • The distributions, mechanisms, and structures of metabolite-binding riboswitches
    • Barrick JE, Breaker RR: The distributions, mechanisms, and structures of metabolite-binding riboswitches. Genome Biol 2007, 8:R239.
    • (2007) Genome Biol , vol.8
    • Barrick, J.E.1    Breaker, R.R.2
  • 95
    • 67650713931 scopus 로고    scopus 로고
    • The structural and functional diversity of metabolite-binding riboswitches
    • Roth A, Breaker RR: The structural and functional diversity of metabolite-binding riboswitches. Annu Rev Biochem 2009, 78:305-34.
    • (2009) Annu Rev Biochem , vol.78 , pp. 305-334
    • Roth, A.1    Breaker, R.R.2
  • 96
    • 77951879579 scopus 로고    scopus 로고
    • NMR resonance assignments of an engineered neomycinsensing riboswitch RNA bound to ribostamycin and tobramycin
    • Schmidtke SR, Duchardt-Ferner E, Weigand JE, Suess B, Wöhnert J: NMR resonance assignments of an engineered neomycinsensing riboswitch RNA bound to ribostamycin and tobramycin. Biomol NMR Assign 2010, 4:115-8.
    • (2010) Biomol NMR Assign , vol.4 , pp. 115-118
    • Schmidtke, S.R.1    Duchardt-Ferner, E.2    Weigand, J.E.3    Suess, B.4    Wöhnert, J.5
  • 97
    • 38049004429 scopus 로고    scopus 로고
    • Screening for engineered neomycin riboswitches that control translation initiation
    • Weigand JE, Sanchez M, Gunnesch E, Zeiher S, Schroeder R, Suess B: Screening for engineered neomycin riboswitches that control translation initiation. RNA 2008, 14:89-97.
    • (2008) RNA , vol.14 , pp. 89-97
    • Weigand, J.E.1    Sanchez, M.2    Gunnesch, E.3    Zeiher, S.4    Schroeder, R.5    Suess, B.6
  • 98
    • 53649104514 scopus 로고    scopus 로고
    • Structural basis for specific, high-affinity tetracycline binding by an in vitro evolved aptamer and artificial riboswitch
    • Xiao H, Edwards TE, Ferré-D'Amaré AR: Structural basis for specific, high-affinity tetracycline binding by an in vitro evolved aptamer and artificial riboswitch. Chem Biol 2008, 15:1125-37.
    • (2008) Chem Biol , vol.15 , pp. 1125-1137
    • Xiao, H.1    Edwards, T.E.2    Ferré-D'Amaré, A.R.3
  • 99
    • 80052447978 scopus 로고    scopus 로고
    • RNA tertiary interactions in a riboswitch stabilize the structure of a kink turn
    • Schroeder KT, Daldrop P, Lilley DMJ: RNA tertiary interactions in a riboswitch stabilize the structure of a kink turn. Structure 2011, 19:1233-40.
    • (2011) Structure , vol.19 , pp. 1233-1240
    • Schroeder, K.T.1    Daldrop, P.2    Lilley, D.M.J.3
  • 101
    • 34247242053 scopus 로고    scopus 로고
    • Structures of RNA switches: Insight into molecular recognition and tertiary structure
    • DOI 10.1002/anie.200604163
    • Schwalbe H, Buck J, Fürtig B, Noeske J, Wöhnert J: Structures of RNA switches: insight into molecular recognition and tertiary structure. Angew Chem Int Ed Engl 2007, 46:1212-9. (Pubitemid 46981366)
    • (2007) Angewandte Chemie - International Edition , vol.46 , Issue.8 , pp. 1212-1219
    • Schwalbe, H.1    Buck, J.2    Furtig, B.3    Noeske, J.4    Wohnert, J.5
  • 102
    • 55249114833 scopus 로고    scopus 로고
    • Structural insights into amino acid binding and gene control by a lysine riboswitch
    • Serganov A, Huang L, Patel DJ: Structural insights into amino acid binding and gene control by a lysine riboswitch. Nature 2008, 455:1263-7.
    • (2008) Nature , vol.455 , pp. 1263-1267
    • Serganov, A.1    Huang, L.2    Patel, D.J.3
  • 103
    • 66549094626 scopus 로고    scopus 로고
    • The long and the short of riboswitches
    • Serganov A: The long and the short of riboswitches. Curr Opin Struct Biol 2009, 19:251-9.
    • (2009) Curr Opin Struct Biol , vol.19 , pp. 251-259
    • Serganov, A.1
  • 104
    • 33746228126 scopus 로고    scopus 로고
    • Tertiary Contacts Distant from the Active Site Prime a Ribozyme for Catalysis
    • DOI 10.1016/j.cell.2006.06.036, PII S0092867406008567
    • Martick M, Scott WG: Tertiary contacts distant from the active site prime a ribozyme for catalysis. Cell 2006, 126: 309-20. (Pubitemid 44092962)
    • (2006) Cell , vol.126 , Issue.2 , pp. 309-320
    • Martick, M.1    Scott, W.G.2
  • 106
    • 33748517635 scopus 로고    scopus 로고
    • Investigation of de novo totally random biosequences. Part IV. Folding properties of de novo, totally random RNAs
    • DOI 10.1002/cbdv.200690090
    • Lucrezia D de, Franchi M, Chiarabelli C, Gallori E, Luisi PL: Investigation of de novo totally random biosequences, Part IV: Folding Properties of de novo, totally random RNAs. Chem Biodivers 2006, 3:869-77. (Pubitemid 44355681)
    • (2006) Chemistry and Biodiversity , vol.3 , Issue.8 , pp. 869-877
    • De Lucrezia, D.1    Franchi, M.2    Chiarabelli, C.3    Gallori, E.4    Luisi, P.L.5
  • 107
    • 70349778813 scopus 로고    scopus 로고
    • RNA-based computation in live cells
    • Benenson Y: RNA-based computation in live cells. Curr Opin Biotechnol 2009, 20:471-8.
    • (2009) Curr Opin Biotechnol , vol.20 , pp. 471-478
    • Benenson, Y.1
  • 108
    • 84863980696 scopus 로고    scopus 로고
    • Biomolecular computing systems: Principles, progress and potential
    • Benenson Y: Biomolecular computing systems: principles, progress and potential. Nat Rev Genet 2012, 13:455-68.
    • (2012) Nat Rev Genet , vol.13 , pp. 455-468
    • Benenson, Y.1
  • 109
    • 79952645848 scopus 로고    scopus 로고
    • Informing biological design by integration of systems and synthetic biology
    • Smolke CD, Silver PA: Informing biological design by integration of systems and synthetic biology. Cell 2011, 144:855-9.
    • (2011) Cell , vol.144 , pp. 855-859
    • Smolke, C.D.1    Silver, P.A.2
  • 110
    • 84877926794 scopus 로고    scopus 로고
    • Multi-disciplinary methods to define RNA-protein interactions and regulatory networks
    • Ascano M, Gerstberger S, Tuschl T: Multi-disciplinary methods to define RNA-protein interactions and regulatory networks. Curr Opin Genet Dev 2013, 23:20-8.
    • (2013) Curr Opin Genet Dev , vol.23 , pp. 20-28
    • Ascano, M.1    Gerstberger, S.2    Tuschl, T.3
  • 111
    • 84867311063 scopus 로고    scopus 로고
    • Inducible control of subcellular RNA localization using a synthetic protein-RNA aptamer interaction
    • Belmont BJ, Niles JC: Inducible control of subcellular RNA localization using a synthetic protein-RNA aptamer interaction. PLoS ONE 2012, 7:e46868.
    • (2012) PLoS ONE , vol.7
    • Belmont, B.J.1    Niles, J.C.2
  • 112
    • 34250191761 scopus 로고    scopus 로고
    • RNA visualization in live bacterial cells using fluorescent protein complementation
    • DOI 10.1038/nmeth1023, PII NMETH1023
    • Valencia-Burton M, McCullough RM, Cantor CR, Broude NE: RNA visualization in live bacterial cells using fluorescent protein complementation. Nat Methods 2007, 4:421-7. (Pubitemid 46901276)
    • (2007) Nature Methods , vol.4 , Issue.5 , pp. 421-427
    • Valencia-Burton, M.1    McCullough, R.M.2    Cantor, C.R.3    Broude, N.E.4
  • 113
    • 84879549207 scopus 로고    scopus 로고
    • Directed evolution of a synthetic RNAprotein module to create a new translational switch
    • Hara T, Saito H, Inoue T: Directed evolution of a synthetic RNAprotein module to create a new translational switch. Chem Commun (Camb.) 2013, 49:3833-5.
    • (2013) Chem Commun (Camb.) , vol.49 , pp. 3833-3835
    • Hara, T.1    Saito, H.2    Inoue, T.3
  • 114
    • 84868250796 scopus 로고    scopus 로고
    • Feedback control of protein expression in mammalian cells by tunable synthetic translational inhibition
    • Stapleton JA, Endo K, Fujita Y, Hayashi K, Takinoue M, Saito H, Inoue T: Feedback control of protein expression in mammalian cells by tunable synthetic translational inhibition. ACS Synth Biol 2012, 1:83-8.
    • (2012) ACS Synth Biol , vol.1 , pp. 83-88
    • Stapleton, J.A.1    Endo, K.2    Fujita, Y.3    Hayashi, K.4    Takinoue, M.5    Saito, H.6    Inoue, T.7
  • 115
    • 78751632678 scopus 로고    scopus 로고
    • Synthetic human cell fate regulation by protein-driven RNA switches
    • Saito H, Fujita Y, Kashida S, Hayashi K, Inoue T: Synthetic human cell fate regulation by protein-driven RNA switches. Nat Commun 2011, 2:160.
    • (2011) Nat Commun , vol.2 , pp. 160
    • Saito, H.1    Fujita, Y.2    Kashida, S.3    Hayashi, K.4    Inoue, T.5
  • 117
    • 34848895990 scopus 로고    scopus 로고
    • RNA and RNP as new molecular parts in synthetic biology
    • DOI 10.1016/j.jbiotec.2007.07.952, PII S0168165607015064
    • Saito H, Inoue T: RNA and RNP as new molecular parts in synthetic biology. J Biotechnol 2007, 132:1-7. (Pubitemid 47503387)
    • (2007) Journal of Biotechnology , vol.132 , Issue.1 , pp. 1-7
    • Saito, H.1    Inoue, T.2
  • 118
    • 78649429678 scopus 로고    scopus 로고
    • Reprogramming cellular behavior with RNA controllers responsive to endogenous proteins
    • Culler SJ, Hoff KG, Smolke CD: Reprogramming cellular behavior with RNA controllers responsive to endogenous proteins. Science 2010, 330:1251-5.
    • (2010) Science , vol.330 , pp. 1251-1255
    • Culler, S.J.1    Hoff, K.G.2    Smolke, C.D.3
  • 119
    • 79960962252 scopus 로고    scopus 로고
    • Finding the missing code of RNA recognition by PUF proteins
    • Chen Y, Varani G: Finding the missing code of RNA recognition by PUF proteins. Chem Biol 2011, 18:821-3.
    • (2011) Chem Biol , vol.18 , pp. 821-823
    • Chen, Y.1    Varani, G.2
  • 120
    • 84857198283 scopus 로고    scopus 로고
    • Modular recognition of nucleic acids by PUF, TALE and PPR proteins
    • Filipovska A, Rackham O: Modular recognition of nucleic acids by PUF, TALE and PPR proteins. Mol Biosyst 2012, 8: 699-708.
    • (2012) Mol Biosyst , vol.8 , pp. 699-708
    • Filipovska, A.1    Rackham, O.2
  • 122
    • 84866145891 scopus 로고    scopus 로고
    • A combinatorial amino acid code for RNA recognition by pentatricopeptide repeat proteins
    • Barkan A, Rojas M, Fujii S, Yap A, Chong YS, Bond CS, Small I: A combinatorial amino acid code for RNA recognition by pentatricopeptide repeat proteins. PLoS Genet 2012, 8:e1002910.
    • (2012) PLoS Genet , vol.8
    • Barkan, A.1    Rojas, M.2    Fujii, S.3    Yap, A.4    Chong, Y.S.5    Bond, C.S.6    Small, I.7
  • 123
    • 84866465332 scopus 로고    scopus 로고
    • TectoRNP: Selfassembling RNAs with peptide recognition motifs as templates for chemical peptide ligation
    • Yamashita K, Tanaka T, Furuta H, Ikawa Y: TectoRNP: selfassembling RNAs with peptide recognition motifs as templates for chemical peptide ligation. J Pept Sci 2012, 18:635-42.
    • (2012) J Pept Sci , vol.18 , pp. 635-642
    • Yamashita, K.1    Tanaka, T.2    Furuta, H.3    Ikawa, Y.4
  • 128
    • 70549098251 scopus 로고    scopus 로고
    • Non-natural nucleic acids for synthetic biology
    • Appella DH: Non-natural nucleic acids for synthetic biology. Curr Opin Chem Biol 2009, 13:687-96.
    • (2009) Curr Opin Chem Biol , vol.13 , pp. 687-696
    • Appella, D.H.1
  • 129
    • 84872379019 scopus 로고    scopus 로고
    • Synthetic polymers and their potential as genetic materials
    • Pinheiro VB, Loakes D, Holliger P: Synthetic polymers and their potential as genetic materials. Bioessays 2013, 35:113-22.
    • (2013) Bioessays , vol.35 , pp. 113-122
    • Pinheiro, V.B.1    Loakes, D.2    Holliger, P.3
  • 131
    • 84865286097 scopus 로고    scopus 로고
    • The XNA world: Progress towards replication and evolution of synthetic genetic polymers
    • Pinheiro VB, Holliger P: The XNA world: progress towards replication and evolution of synthetic genetic polymers. Curr Opin Chem Biol 2012, 16:245-52.
    • (2012) Curr Opin Chem Biol , vol.16 , pp. 245-252
    • Pinheiro, V.B.1    Holliger, P.2
  • 132
    • 84865312151 scopus 로고    scopus 로고
    • Click nucleic acid ligation: Applications in biology and nanotechnology
    • El-Sagheer AH, Brown T: Click nucleic acid ligation: applications in biology and nanotechnology. Acc Chem Res 2012, 45:1258-67.
    • (2012) Acc Chem Res , vol.45 , pp. 1258-1267
    • El-Sagheer, A.H.1    Brown, T.2
  • 133
    • 84863621874 scopus 로고    scopus 로고
    • Genetically encoded RNA photoswitches as tools for the control of gene expression
    • Jäschke A: Genetically encoded RNA photoswitches as tools for the control of gene expression. FEBS Lett 2012, 586:2106-11.
    • (2012) FEBS Lett , vol.586 , pp. 2106-2111
    • Jäschke, A.1
  • 135
    • 84870518918 scopus 로고    scopus 로고
    • Fluorogenic RNA nanoparticles for monitoring RNA folding and degradation in real time in living cells
    • Reif R, Haque F, Guo P: Fluorogenic RNA nanoparticles for monitoring RNA folding and degradation in real time in living cells. Nucleic Acid Ther 2012, 22:428-37.
    • (2012) Nucleic Acid Ther , vol.22 , pp. 428-437
    • Reif, R.1    Haque, F.2    Guo, P.3
  • 136
    • 77952404245 scopus 로고    scopus 로고
    • A proximity-based programmable DNA nanoscale assembly line
    • Gu H, Chao J, Xiao S, Seeman NC: A proximity-based programmable DNA nanoscale assembly line. Nature 2010, 465:202-5.
    • (2010) Nature , vol.465 , pp. 202-205
    • Gu, H.1    Chao, J.2    Xiao, S.3    Seeman, N.C.4
  • 137
    • 64249145393 scopus 로고    scopus 로고
    • A bipedal DNA Brownian motor with coordinated legs
    • Omabegho T, Sha R, Seeman NC: A bipedal DNA Brownian motor with coordinated legs. Science 2009, 324:67-71.
    • (2009) Science , vol.324 , pp. 67-71
    • Omabegho, T.1    Sha, R.2    Seeman, N.C.3
  • 139
    • 77956647571 scopus 로고    scopus 로고
    • Functional nucleic acid nanostructures and DNA machines
    • Teller C, Willner I: Functional nucleic acid nanostructures and DNA machines. Curr Opin Biotechnol 2010, 21:376-91.
    • (2010) Curr Opin Biotechnol , vol.21 , pp. 376-391
    • Teller, C.1    Willner, I.2
  • 141
    • 84863229777 scopus 로고    scopus 로고
    • Reprogramming the genetic code: From triplet to quadruplet codes
    • Wang K, Schmied WH, Chin JW: Reprogramming the genetic code: from triplet to quadruplet codes. Angew Chem Int Ed Engl 2012, 51:2288-97.
    • (2012) Angew Chem Int Ed Engl , vol.51 , pp. 2288-2297
    • Wang, K.1    Schmied, W.H.2    Chin, J.W.3
  • 142
    • 77949772551 scopus 로고    scopus 로고
    • Encoding multiple unnatural amino acids via evolution of a quadrupletdecoding ribosome
    • Neumann H, Wang K, Davis L, Garcia-Alai M, Chin JW: Encoding multiple unnatural amino acids via evolution of a quadrupletdecoding ribosome. Nature 2010, 464:441-4.
    • (2010) Nature , vol.464 , pp. 441-444
    • Neumann, H.1    Wang, K.2    Davis, L.3    Garcia-Alai, M.4    Chin, J.W.5
  • 143
    • 24044543111 scopus 로고    scopus 로고
    • A network of orthogonal ribosome x mRNA pairs
    • Rackham O, Chin JW: A network of orthogonal ribosome x mRNA pairs. Nat Chem Biol 2005, 1:159-66.
    • (2005) Nat Chem Biol , vol.1 , pp. 159-166
    • Rackham, O.1    Chin, J.W.2
  • 144
    • 0029147392 scopus 로고
    • Structurally complex and highly active RNA ligases derived from RNA sequences
    • random
    • Ekland EH, Szostak JW, Bartel DP: Structurally complex and highly active RNA ligases derived from random RNA sequences. Science 1995, 269:364-70.
    • (1995) Science , vol.269 , pp. 364-370
    • Ekland, E.H.1    Szostak, J.W.2    Bartel, D.P.3
  • 145
    • 0032541654 scopus 로고    scopus 로고
    • RNA-catalysed nucleotide synthesis
    • DOI 10.1038/26193
    • Unrau PJ, Bartel DP: RNA-catalysed nucleotide synthesis. Nature 1998, 395:260-3. (Pubitemid 28447546)
    • (1998) Nature , vol.395 , Issue.6699 , pp. 260-263
    • Unrau, P.J.1    Bartel, D.P.2
  • 146
    • 0027488624 scopus 로고
    • Isolation of new ribozymes from a large pool of random sequences
    • Bartel DP, Szostak JW: Isolation of new ribozymes from a large pool of random sequences [see comment]. Science 1993, 261:1411-8. (Pubitemid 23334262)
    • (1993) Science , vol.261 , Issue.5127 , pp. 1411-1418
    • Bartel, D.P.1    Szostak, J.W.2
  • 148
    • 9344227328 scopus 로고    scopus 로고
    • Generation of a catalytic module on a self-folding RNA
    • DOI 10.1261/rna.7170304
    • Yoshioka W, Ikawa Y, Jaeger L, Shiraishi H, Inoue T: Generation of a catalytic module on a self-folding RNA. RNA 2004, 10:1900-6. (Pubitemid 39557827)
    • (2004) RNA , vol.10 , Issue.12 , pp. 1900-1906
    • Yoshioka, W.1    Ikawa, Y.2    Jaeger, L.3    Shiraishi, H.4    Inoue, T.5
  • 150
    • 0035906978 scopus 로고    scopus 로고
    • RNA-catalyzed RNA polymerization: Accurate and general RNA-templated primer extension
    • DOI 10.1126/science.1060786
    • Johnston WK, Unrau PJ, Lawrence MS, Glasner ME, Bartel DP: RNAcatalyzed RNA polymerization: accurate and general RNAtemplated primer extension. Science 2001, 292:1319-25. (Pubitemid 32476210)
    • (2001) Science , vol.292 , Issue.5520 , pp. 1319-1325
    • Johnston, W.K.1    Unrau, P.J.2    Lawrence, M.S.3    Glasner, M.E.4    Bartel, D.P.5
  • 151
    • 0036009338 scopus 로고    scopus 로고
    • RNA-catalyzed RNA ligation on an external RNA template
    • DOI 10.1016/S1074-5521(02)00110-2, PII S1074552102001102
    • McGinness KE, Joyce GF: RNA-catalyzed RNA ligation on an external RNA template. Chem Biol 2002, 9:297-307. (Pubitemid 34253412)
    • (2002) Chemistry and Biology , vol.9 , Issue.3 , pp. 297-307
    • McGinness, K.E.1    Joyce, G.F.2
  • 152
    • 79953809654 scopus 로고    scopus 로고
    • Ribozyme-catalyzed transcription of an active ribozyme
    • Wochner A, Attwater J, Coulson A, Holliger P: Ribozyme-catalyzed transcription of an active ribozyme. Science 2011, 332:209-12.
    • (2011) Science , vol.332 , pp. 209-212
    • Wochner, A.1    Attwater, J.2    Coulson, A.3    Holliger, P.4
  • 153
    • 34250860849 scopus 로고    scopus 로고
    • Selection of an improved RNA polymerase ribozyme with superior extension and fidelity
    • DOI 10.1261/rna.548807
    • Zaher HS, Unrau PJ: Selection of an improved RNA polymerase ribozyme with superior extension and fidelity. RNA 2007, 13:1017-26. (Pubitemid 46984892)
    • (2007) RNA , vol.13 , Issue.7 , pp. 1017-1026
    • Zaher, H.S.1    Unrau, P.J.2
  • 154
    • 84862195751 scopus 로고    scopus 로고
    • Structural architecture of the human long non-coding RNA, steroid receptor RNA activator
    • Novikova IV, Hennelly SP, Sanbonmatsu KY: Structural architecture of the human long non-coding RNA, steroid receptor RNA activator. Nucleic Acids Res 2012, 40:5034-51.
    • (2012) Nucleic Acids Res , vol.40 , pp. 5034-5051
    • Novikova, I.V.1    Hennelly, S.P.2    Sanbonmatsu, K.Y.3
  • 156
    • 84864939784 scopus 로고    scopus 로고
    • OLE RNA protects extremophilic bacteria from alcohol toxicity
    • Wallace JG, Zhou Z, Breaker RR: OLE RNA protects extremophilic bacteria from alcohol toxicity. Nucleic Acids Res 2012, 40:6898-907.
    • (2012) Nucleic Acids Res , vol.40 , pp. 6898-6907
    • Wallace, J.G.1    Zhou, Z.2    Breaker, R.R.3
  • 157
    • 71449114713 scopus 로고    scopus 로고
    • Exceptional structured noncoding RNAs revealed by bacterial metagenome analysis
    • Weinberg Z, Perreault J, Meyer MM, Breaker RR: Exceptional structured noncoding RNAs revealed by bacterial metagenome analysis. Nature 2009, 462:656-9.
    • (2009) Nature , vol.462 , pp. 656-659
    • Weinberg, Z.1    Perreault, J.2    Meyer, M.M.3    Breaker, R.R.4
  • 158
    • 84883769504 scopus 로고    scopus 로고
    • Rise of the RNA machines: Exploring the structure of long non-coding RNAs
    • Novikova IV, Hennelly SP, Tung C, Sanbonmatsu KY: Rise of the RNA Machines: Exploring the Structure of Long Non-Coding RNAs. J Mol Biol 2013, 425:3731-46.
    • (2013) J Mol Biol , vol.425 , pp. 3731-3746
    • Novikova, I.V.1    Hennelly, S.P.2    Tung, C.3    Sanbonmatsu, K.Y.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.