-
1
-
-
0025074907
-
In vitro selection of RNA molecules that bind specific ligands
-
Ellington, A.D. & Szostak, J.W. (1990). In vitro selection of RNA molecules that bind specific ligands. Nature 346, 818-822.
-
(1990)
Nature
, vol.346
, pp. 818-822
-
-
Ellington, A.D.1
Szostak, J.W.2
-
2
-
-
0025332385
-
Selection in vitro of an RNA enzyme that specifically cleaves single-stranded DNA
-
Robertson, D.L. & Joyce, G.F. (1990). Selection in vitro of an RNA enzyme that specifically cleaves single-stranded DNA. Nature 344, 467-468.
-
(1990)
Nature
, vol.344
, pp. 467-468
-
-
Robertson, D.L.1
Joyce, G.F.2
-
3
-
-
0025194307
-
Systematic evolution of ligands by exponential enrichment: RNA ligands to bacteriophage T4 DNA polymerase
-
Tuerk, C. & Gold, L. (1990). Systematic evolution of ligands by exponential enrichment: RNA ligands to bacteriophage T4 DNA polymerase. Science 249, 505-510.
-
(1990)
Science
, vol.249
, pp. 505-510
-
-
Tuerk, C.1
Gold, L.2
-
4
-
-
0028472621
-
Inventing and improving ribozyme function: Rational design versus iterative selection methods
-
Breaker, R.R. & Joyce, G.F. (1994). Inventing and improving ribozyme function: rational design versus iterative selection methods. Trends Biotechnol. 12, 268-275.
-
(1994)
Trends Biotechnol.
, vol.12
, pp. 268-275
-
-
Breaker, R.R.1
Joyce, G.F.2
-
5
-
-
0016422633
-
An analysis of the structure of tRNA
-
Sigler, P.B. (1975). An analysis of the structure of tRNA. Annu. Rev. Biophys. Bioeng. 4, 477-527.
-
(1975)
Annu. Rev. Biophys. Bioeng.
, vol.4
, pp. 477-527
-
-
Sigler, P.B.1
-
6
-
-
0013364977
-
Prediction and experimental investigation of RNA secondary and tertiary foldings
-
Nagai, K. & Mattaj, I.W., eds, IRL Press at Oxford University Press, Oxford
-
Westhof, E. & Michel, F. (1994). Prediction and experimental investigation of RNA secondary and tertiary foldings. In RNA-Protein Interactions: Frontiers in Molecular Biology. (Nagai, K. & Mattaj, I.W., eds), pp. 25-51, IRL Press at Oxford University Press, Oxford.
-
(1994)
RNA-Protein Interactions: Frontiers in Molecular Biology
, pp. 25-51
-
-
Westhof, E.1
Michel, F.2
-
7
-
-
0002277269
-
Probing RNA structure, function, and history by comparative analysis
-
Atkins, R.F. & Gesteland, J.F., eds, Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY
-
Woese, C.R. & Pace, N.R. (1993). Probing RNA structure, function, and history by comparative analysis. In The RNA World. (Atkins, R.F. & Gesteland, J.F., eds), pp. 91-117, Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
-
(1993)
The RNA World
, pp. 91-117
-
-
Woese, C.R.1
Pace, N.R.2
-
8
-
-
0023665268
-
Probing the structure of RNAs in solution
-
Ehresmann, C., Baudin, F., Mougel, M., Romby, P., Ebel, J.P. & Ehresmann, B. (1987). Probing the structure of RNAs in solution. Nucleic Acids Res. 15, 53-71.
-
(1987)
Nucleic Acids Res.
, vol.15
, pp. 53-71
-
-
Ehresmann, C.1
Baudin, F.2
Mougel, M.3
Romby, P.4
Ebel, J.P.5
Ehresmann, B.6
-
9
-
-
0024828055
-
A guide for probing native small nuclear RNA and ribonucleoprotein structures
-
Krol, A. & Carbon, P. (1989). A guide for probing native small nuclear RNA and ribonucleoprotein structures. Methods Enzymol. 180, 212-227.
-
(1989)
Methods Enzymol.
, vol.180
, pp. 212-227
-
-
Krol, A.1
Carbon, P.2
-
10
-
-
0026651086
-
Small catalytic RNA
-
Symons, R.H. (1992). Small catalytic RNA. Annu. Rev. Biochem. 61, 641-671.
-
(1992)
Annu. Rev. Biochem.
, vol.61
, pp. 641-671
-
-
Symons, R.H.1
-
11
-
-
0028063567
-
Three-dimensional structure of a hammerhead ribozyme
-
Pley, H.W., Flaherty, K.M. & McKay, D.B. (1994). Three-dimensional structure of a hammerhead ribozyme. Nature 372, 68-74.
-
(1994)
Nature
, vol.372
, pp. 68-74
-
-
Pley, H.W.1
Flaherty, K.M.2
McKay, D.B.3
-
12
-
-
0029073091
-
The crystal structure of an all-RNA hammerhead ribozyme: A proposed mechanism for RNA catalytic cleavage
-
Scott, W.G., Finch, J.T. & Klug, A. (1995). The crystal structure of an all-RNA hammerhead ribozyme: a proposed mechanism for RNA catalytic cleavage. Cell 81, 991-1002.
-
(1995)
Cell
, vol.81
, pp. 991-1002
-
-
Scott, W.G.1
Finch, J.T.2
Klug, A.3
-
13
-
-
0027173193
-
An independently folding domain of RNA tertiary structure within the Tetrahymena ribozyme
-
Murphy, F.L. & Cech, T.R. (1993). An independently folding domain of RNA tertiary structure within the Tetrahymena ribozyme. Biochemistry 32, 5291-5300.
-
(1993)
Biochemistry
, vol.32
, pp. 5291-5300
-
-
Murphy, F.L.1
Cech, T.R.2
-
14
-
-
0027985820
-
Coaxially stacked RNA helices in the catalytic center of the Tetrahymena ribozyme
-
Murphy, F.L., Wang, Y., Griffith, J.D. & Cech, T.R. (1994). Coaxially stacked RNA helices in the catalytic center of the Tetrahymena ribozyme. Science 265, 1709-1712.
-
(1994)
Science
, vol.265
, pp. 1709-1712
-
-
Murphy, F.L.1
Wang, Y.2
Griffith, J.D.3
Cech, T.R.4
-
15
-
-
0028301674
-
GAAA tetraloop and conserved bulge stabilize tertiary structure of a group i intron domain
-
Murphy, F.L. & Cech, T.R. (1994). GAAA tetraloop and conserved bulge stabilize tertiary structure of a group I intron domain. J. Mol. Biol. 236, 49-63.
-
(1994)
J. Mol. Biol.
, vol.236
, pp. 49-63
-
-
Murphy, F.L.1
Cech, T.R.2
-
16
-
-
0027237520
-
Crystallization of ribozymes and small RNA motifs by a sparse matrix approach
-
Doudna, J.A., Grosshans, C., Gooding, A. & Kundrot, C.E. (1993). Crystallization of ribozymes and small RNA motifs by a sparse matrix approach. Proc. Natl. Acad. Sci. USA 90, 7829-7833.
-
(1993)
Proc. Natl. Acad. Sci. USA
, vol.90
, pp. 7829-7833
-
-
Doudna, J.A.1
Grosshans, C.2
Gooding, A.3
Kundrot, C.E.4
-
17
-
-
0028945859
-
Higher order folding and domain analysis of the ribozyme from Bacillus subtilis ribonuclease P
-
Pan, T. (1995). Higher order folding and domain analysis of the ribozyme from Bacillus subtilis ribonuclease P. Biochemistry 34, 902-909.
-
(1995)
Biochemistry
, vol.34
, pp. 902-909
-
-
Pan, T.1
-
18
-
-
0029258956
-
Self-assembly of a group i intron active site from its component tertiary structural domains
-
Doudna, J.A. & Cech, T.R. (1995). Self-assembly of a group I intron active site from its component tertiary structural domains. RNA 1, 36-45.
-
(1995)
RNA
, vol.1
, pp. 36-45
-
-
Doudna, J.A.1
Cech, T.R.2
-
19
-
-
0026017131
-
Reconstitution of group i intron self-splicing reaction with an activator RNA
-
Van der Horst, G., Christian, A. & Inoue, T. (1991). Reconstitution of group I intron self-splicing reaction with an activator RNA. Proc. Natl. Acad. Sci. USA 88, 184-188.
-
(1991)
Proc. Natl. Acad. Sci. USA
, vol.88
, pp. 184-188
-
-
Van Der Horst, G.1
Christian, A.2
Inoue, T.3
-
20
-
-
0028921811
-
Frequent use of the same tertiary motif by self-folding RNAs
-
Costa, M. & Michel, F. (1995). Frequent use of the same tertiary motif by self-folding RNAs. EMBO J. 14, 1276-1285.
-
(1995)
EMBO J.
, vol.14
, pp. 1276-1285
-
-
Costa, M.1
Michel, F.2
-
21
-
-
0027433710
-
Monitoring of the coopera-live unfolding of the sunY group i intron of the bacteriophage T4
-
Jaeger, L., Westhof, E. & Michel, F. (1993). Monitoring of the coopera-live unfolding of the sunY group I intron of the bacteriophage T4. J. Mol. Biol. 234, 331-346.
-
(1993)
J. Mol. Biol.
, vol.234
, pp. 331-346
-
-
Jaeger, L.1
Westhof, E.2
Michel, F.3
-
22
-
-
0029805902
-
Activity and thermostability of the small self-splicing group i intron in the pre-tRNAIle of the purple bacterium Azoarcus
-
Tanner, M.A. & Cech, T.R. (1996). Activity and thermostability of the small self-splicing group I intron in the pre-tRNAIle of the purple bacterium Azoarcus. RNA 2, 74-83.
-
(1996)
RNA
, vol.2
, pp. 74-83
-
-
Tanner, M.A.1
Cech, T.R.2
-
23
-
-
0027991626
-
Kinetic intermediates in RNA folding
-
Zarrinkar, P.P. & Williamson, J.R. (1994). Kinetic intermediates in RNA folding. Science 265, 918-924.
-
(1994)
Science
, vol.265
, pp. 918-924
-
-
Zarrinkar, P.P.1
Williamson, J.R.2
-
24
-
-
0029163563
-
RNA chaperones and the RNA folding problem
-
Herschlag, D. (1995). RNA chaperones and the RNA folding problem. J. Biol. Chem. 270, 20871-20874.
-
(1995)
J. Biol. Chem.
, vol.270
, pp. 20871-20874
-
-
Herschlag, D.1
-
25
-
-
0030593036
-
Assembly of a ribonucleoprotein catalyst by tertiary structure capture
-
Weeks, K.M. & Cech, T.R. (1996). Assembly of a ribonucleoprotein catalyst by tertiary structure capture. Science 271, 345-348.
-
(1996)
Science
, vol.271
, pp. 345-348
-
-
Weeks, K.M.1
Cech, T.R.2
-
26
-
-
0002006297
-
Are there pathways for protein folding?
-
Levinthal, C. (1968). Are there pathways for protein folding? J. Chim. Phys. 65, 44-47.
-
(1968)
J. Chim. Phys.
, vol.65
, pp. 44-47
-
-
Levinthal, C.1
-
27
-
-
0026595799
-
Levinthal's paradox
-
Zwanzig, R., Szabo, A. & Bagchi, B. (1992). Levinthal's paradox. Proc. Natl. Acad. Sci. USA 89, 20-22.
-
(1992)
Proc. Natl. Acad. Sci. USA
, vol.89
, pp. 20-22
-
-
Zwanzig, R.1
Szabo, A.2
Bagchi, B.3
-
28
-
-
76549252207
-
The structure of proteins: Two hydrogen-bonded helical configurations of the polypeptide chain
-
Pauling, L., Corey, R.B. & Branson, H.R. (1951). The structure of proteins: two hydrogen-bonded helical configurations of the polypeptide chain. Proc. Natl. Acad. Sci. USA 37, 205-211.
-
(1951)
Proc. Natl. Acad. Sci. USA
, vol.37
, pp. 205-211
-
-
Pauling, L.1
Corey, R.B.2
Branson, H.R.3
-
29
-
-
0000748031
-
The concept of a conformationally 'rigid' nucleotide and its significance in polynucleotide conformational analysis
-
Bergmann, V.E.D. & Pullman, B., eds, Jerusalem
-
Sundaralingam, M. (1973). The concept of a conformationally 'rigid' nucleotide and its significance in polynucleotide conformational analysis. In Conformation of Biological Molecules and Polymers. (Bergmann, V.E.D. & Pullman, B., eds), pp. 417-456, Jerusalem.
-
(1973)
Conformation of Biological Molecules and Polymers.
, pp. 417-456
-
-
Sundaralingam, M.1
-
30
-
-
0028446537
-
A three-dimensional model of hepatitis delta virus ribozyme based on biochemical and mutational analysis
-
Tanner, N.K., Schaff, S., Thill, G., Petit-Koskas, E., Crain-Denoyelle, A. & Westhof, E. (1994). A three-dimensional model of hepatitis delta virus ribozyme based on biochemical and mutational analysis. Curr. Biol. 4, 488-498.
-
(1994)
Curr. Biol.
, vol.4
, pp. 488-498
-
-
Tanner, N.K.1
Schaff, S.2
Thill, G.3
Petit-Koskas, E.4
Crain-Denoyelle, A.5
Westhof, E.6
-
31
-
-
0025771080
-
Three-dimensional model of E. coli ribosomal 5S RNA as deduced from structure probing in solution and computer modeling
-
Brunei, C., Romby, P., Westhof, E, Ehresmann, C. & Ehresmann, B. (1991). Three-dimensional model of E. coli ribosomal 5S RNA as deduced from structure probing in solution and computer modeling. J. Mol. Biol. 221, 293-308.
-
(1991)
J. Mol. Biol.
, vol.221
, pp. 293-308
-
-
Brunei, C.1
Romby, P.2
Westhof, E.3
Ehresmann, C.4
Ehresmann, B.5
-
32
-
-
0025678737
-
Modelling of the three-dimensional architecture of group-I catalytic introns based on comparative sequence analysis
-
Michel, F. & Westhof, E. (1990). Modelling of the three-dimensional architecture of group-I catalytic introns based on comparative sequence analysis. J. Mol. Biol. 216, 585.
-
(1990)
J. Mol. Biol.
, vol.216
, pp. 585
-
-
Michel, F.1
Westhof, E.2
-
33
-
-
0029877099
-
Parallel worlds
-
Draper, D.E. (1996). Parallel worlds. Nat. Struct. Biol. 3, 397-400.
-
(1996)
Nat. Struct. Biol.
, vol.3
, pp. 397-400
-
-
Draper, D.E.1
-
34
-
-
0029866752
-
Mapping in three dimensions of regions in a catalytic TNA protected from attack by an Fe(II)-EDTA reagent
-
Westhof, E., Wesolowski, D. & Altman, S. (1996). Mapping in three dimensions of regions in a catalytic TNA protected from attack by an Fe(II)-EDTA reagent. J. Mol. Biol. 258, 600-613.
-
(1996)
J. Mol. Biol.
, vol.258
, pp. 600-613
-
-
Westhof, E.1
Wesolowski, D.2
Altman, S.3
-
35
-
-
0030342681
-
Conformational switching in designed peptides: The helix/sheet transition
-
1359-0278-001-00091
-
Cerpa, R., Cohen, F.E. & Kuntz, I.D. (1996). Conformational switching in designed peptides: the helix/sheet transition. Folding & Design 1, 91-101; 1359-0278-001-00091.
-
(1996)
Folding & Design
, vol.1
, pp. 91-101
-
-
Cerpa, R.1
Cohen, F.E.2
Kuntz, I.D.3
-
36
-
-
0029865623
-
Context-dependent secondary structure formation of a designed protein sequence
-
Minor, D.L. & Kim, P.S. (1996). Context-dependent secondary structure formation of a designed protein sequence. Nature 380, 730-734.
-
(1996)
Nature
, vol.380
, pp. 730-734
-
-
Minor, D.L.1
Kim, P.S.2
-
37
-
-
0028925377
-
Prion protein peptides induces alpha-helix to beta-sheet conformational transitions
-
Nguyen, J., Baldwin, M.A., Cohen, F.E. & Prusiner, S.B. (1995). Prion protein peptides induces alpha-helix to beta-sheet conformational transitions. Biochemistry 34, 4186-4192.
-
(1995)
Biochemistry
, vol.34
, pp. 4186-4192
-
-
Nguyen, J.1
Baldwin, M.A.2
Cohen, F.E.3
Prusiner, S.B.4
-
38
-
-
0026631361
-
NMR studies of amyloid beta-peptides: Proton assignments, secondary structure, and mechanism of an alpha helix-beta sheet conversion for a homologous, 28-residue N-terminal fragment
-
Zagorski, M.G. & Barrow, C.J. (1992). NMR studies of amyloid beta-peptides: proton assignments, secondary structure, and mechanism of an alpha helix-beta sheet conversion for a homologous, 28-residue N-terminal fragment. Biochemistry 31, 5621-5631.
-
(1992)
Biochemistry
, vol.31
, pp. 5621-5631
-
-
Zagorski, M.G.1
Barrow, C.J.2
-
39
-
-
0023886015
-
Posttranscriptional regulatory mechanisms in Escherichia coli
-
Gold, L. (1988). Posttranscriptional regulatory mechanisms in Escherichia coli. Annu. Rev. Biochem. 57, 199-223.
-
(1988)
Annu. Rev. Biochem.
, vol.57
, pp. 199-223
-
-
Gold, L.1
-
40
-
-
0028838032
-
Molecular dissection of the pseudoknot governing the translation of Escherichia coli ribosomal protein S15
-
Philippe, C., Bénard, L, Portier, C., Westhof, E., Ehresmann, B. & Ehresmann, C. (1995). Molecular dissection of the pseudoknot governing the translation of Escherichia coli ribosomal protein S15. Nucleic Acids Res. 23, 18-28.
-
(1995)
Nucleic Acids Res.
, vol.23
, pp. 18-28
-
-
Philippe, C.1
Bénard, L.2
Portier, C.3
Westhof, E.4
Ehresmann, B.5
Ehresmann, C.6
-
41
-
-
0027570147
-
Pre-mRNA secondary structure and the regulation of splicing
-
Balvay, L, Libri, D. & Fiszman, M.Y. (1993). Pre-mRNA secondary structure and the regulation of splicing. Bioessays 15, 165-169.
-
(1993)
Bioessays
, vol.15
, pp. 165-169
-
-
Balvay, L.1
Libri, D.2
Fiszman, M.Y.3
-
42
-
-
0023836762
-
Transcription attenuation
-
Yanovsky, C. (1988). Transcription attenuation. J. Biol. Chem. 2, 609-612.
-
(1988)
J. Biol. Chem.
, vol.2
, pp. 609-612
-
-
Yanovsky, C.1
-
43
-
-
33645891924
-
The structure of transfer RNA
-
Butler, J.A.V. & Noble, D., ed., Pergamon Press, Oxford
-
Arnott, S. (1971). The structure of transfer RNA. In Progress in Biophysics and Molecular Biology. (Butler, J.A.V. & Noble, D., ed.), pp. 181-213, Pergamon Press, Oxford.
-
(1971)
Progress in Biophysics and Molecular Biology.
, pp. 181-213
-
-
Arnott, S.1
-
44
-
-
19244363430
-
A central pseudoknotted three-way junction imposes tRNA-like mimicry and the orientation of three 5′ upstream pseudoknots in the 3′ terminus of tobacco mosaic virus RNA
-
Felden, B., Florentz, C., Giegé, R. & Westhof, E. (1996). A central pseudoknotted three-way junction imposes tRNA-like mimicry and the orientation of three 5′ upstream pseudoknots in the 3′ terminus of tobacco mosaic virus RNA. RNA 2, 201-212.
-
(1996)
RNA
, vol.2
, pp. 201-212
-
-
Felden, B.1
Florentz, C.2
Giegé, R.3
Westhof, E.4
-
45
-
-
0025882069
-
A pseudoknot-like structure required for efficient self-cleavage of hepatitis delta virus RNA
-
Perrotta, A.T. & Been, M.D. (1991). A pseudoknot-like structure required for efficient self-cleavage of hepatitis delta virus RNA. Nature 350, 434-436.
-
(1991)
Nature
, vol.350
, pp. 434-436
-
-
Perrotta, A.T.1
Been, M.D.2
-
46
-
-
0028107359
-
Solution structure of the 3′-end of brome mosaic virus genomic RNAs
-
Felden, B., Florentz, C., Giegé, R. & Westhof, E. (1994). Solution structure of the 3′-end of brome mosaic virus genomic RNAs. J. Mol. Biol. 235, 508-531.
-
(1994)
J. Mol. Biol.
, vol.235
, pp. 508-531
-
-
Felden, B.1
Florentz, C.2
Giegé, R.3
Westhof, E.4
-
47
-
-
0023462809
-
Three-dimensional model of the active site of the Tetrahymena ribozyme
-
Kim, S.-H. & Cech, T.R. (1987). Three-dimensional model of the active site of the Tetrahymena ribozyme. Proc. Natl. Acad. Sci. USA 84, 8788-8792.
-
(1987)
Proc. Natl. Acad. Sci. USA
, vol.84
, pp. 8788-8792
-
-
Kim, S.-H.1
Cech, T.R.2
-
48
-
-
0028000994
-
Coaxial stacking of helixes enhances binding of oligoribonucleotides and improves predictions of RNA folding
-
Walter, A.E., et al., & Zuker, M. (1994). Coaxial stacking of helixes enhances binding of oligoribonucleotides and improves predictions of RNA folding. Proc. Natl. Acad. Sci. USA 91, 9218-9222.
-
(1994)
Proc. Natl. Acad. Sci. USA
, vol.91
, pp. 9218-9222
-
-
Walter, A.E.1
Zuker, M.2
-
49
-
-
0025340544
-
Solution structure of human U1 snRNA. Derivation of a possible three-dimensional model
-
Krol, A., Westhof, E., Bach, M., Lührmann, R., Ebel, J.-P. & Carbon, P. (1990). Solution structure of human U1 snRNA. Derivation of a possible three-dimensional model. Nucleic Acids Res. 18, 3803-3811.
-
(1990)
Nucleic Acids Res.
, vol.18
, pp. 3803-3811
-
-
Krol, A.1
Westhof, E.2
Bach, M.3
Lührmann, R.4
Ebel, J.-P.5
Carbon, P.6
-
50
-
-
0029562737
-
The global folding of four-way helical junctions in RNA, including that in U1 snRNA
-
Duckett, D.R, Murchie, A.I.H. & Lilley, D.M.J. (1995). The global folding of four-way helical junctions in RNA, including that in U1 snRNA. Cell 83, 1027-1036.
-
(1995)
Cell
, vol.83
, pp. 1027-1036
-
-
Duckett, D.R.1
Murchie, A.I.H.2
Lilley, D.M.J.3
-
51
-
-
0021879256
-
Crystallographic refinement of yeast aspartic acid transfer RNA
-
Westhof, E., Dumas, P. & Moras, D. (1985). Crystallographic refinement of yeast aspartic acid transfer RNA. J. Mol. Biol. 184, 119-145.
-
(1985)
J. Mol. Biol.
, vol.184
, pp. 119-145
-
-
Westhof, E.1
Dumas, P.2
Moras, D.3
-
52
-
-
0024974668
-
Computer modelling from solution data of spinach chloroplast and of Xenopus laevis somatic and oocyte 5S rRNAs
-
Westhof, E., Romby, P., Romaniuk, P.J., Ebel, J.P., Ehresmann, C. & Ehresmann, B. (1989). Computer modelling from solution data of spinach chloroplast and of Xenopus laevis somatic and oocyte 5S rRNAs. J. Mol. Biol. 207, 417-431.
-
(1989)
J. Mol. Biol.
, vol.207
, pp. 417-431
-
-
Westhof, E.1
Romby, P.2
Romaniuk, P.J.3
Ebel, J.P.4
Ehresmann, C.5
Ehresmann, B.6
-
53
-
-
0003458038
-
tRNA - A treasury of stereochemical information
-
Springer Verlag, New York
-
Saenger, W. (1984). tRNA - a treasury of stereochemical information. In Principles of Nucleic Acid Structure, pp. 331-349, Springer Verlag, New York.
-
(1984)
Principles of Nucleic Acid Structure
, pp. 331-349
-
-
Saenger, W.1
-
54
-
-
0025351085
-
Pseudoknots: A new motif in the RNA game
-
Pleij, C.W.A. (1990). Pseudoknots: a new motif in the RNA game. Trends Biochem. Sci. 15, 143-147.
-
(1990)
Trends Biochem. Sci.
, vol.15
, pp. 143-147
-
-
Pleij, C.W.A.1
-
55
-
-
0000289888
-
RNA pseudoknots: Structural and functional aspects
-
Westhof, E. & Jaeger, L. (1992). RNA pseudoknots: structural and functional aspects. Curr. Opin. Struct. Biol. 2, 327-333.
-
(1992)
Curr. Opin. Struct. Biol.
, vol.2
, pp. 327-333
-
-
Westhof, E.1
Jaeger, L.2
-
56
-
-
0028910590
-
The structure of an RNA pseudoknot that causes efficient frameshifting in mouse mammary tumor virus
-
Shen, L.X. & Tinoco, I. (1995). The structure of an RNA pseudoknot that causes efficient frameshifting in mouse mammary tumor virus. J. Mol. Biol. 247, 963-978.
-
(1995)
J. Mol. Biol.
, vol.247
, pp. 963-978
-
-
Shen, L.X.1
Tinoco, I.2
-
57
-
-
0029874598
-
The kinetic folding pathway of the Tetrahymena ribozyme reveals possible similarities between RNA and protein folding
-
Zarrinkar, P.P. & Williamson, J.R. (1996). The kinetic folding pathway of the Tetrahymena ribozyme reveals possible similarities between RNA and protein folding. Nat Struct. Biol. 3, 432-438.
-
(1996)
Nat Struct. Biol.
, vol.3
, pp. 432-438
-
-
Zarrinkar, P.P.1
Williamson, J.R.2
-
58
-
-
0020198881
-
Comparison of fungal mitochondrial introns reveals extensive homologies in RNA secondary structure
-
Michel, F., Jaquier, A. & Dujon, B. (1982). Comparison of fungal mitochondrial introns reveals extensive homologies in RNA secondary structure. Biochimie 64, 867-881.
-
(1982)
Biochimie
, vol.64
, pp. 867-881
-
-
Michel, F.1
Jaquier, A.2
Dujon, B.3
-
59
-
-
0024286617
-
The secondary structure of ribonuclease P RNA, the catalytic element of a ribonucleoprotein enzyme
-
James, B.D., Olsen, G.J., Liu, N.R. & Pace, N.R. (1988). The secondary structure of ribonuclease P RNA, the catalytic element of a ribonucleoprotein enzyme. Cell 52, 19-26.
-
(1988)
Cell
, vol.52
, pp. 19-26
-
-
James, B.D.1
Olsen, G.J.2
Liu, N.R.3
Pace, N.R.4
-
60
-
-
0025104511
-
Control of replication of plasmid R1 : Structures and sequences of the antisense RNA, CopA, required for its binding to the target RNA, CopT
-
Persson, C., Wagner, E.G.H. & Nordström, K. (1990). Control of replication of plasmid R1 : structures and sequences of the antisense RNA, CopA, required for its binding to the target RNA, CopT. EMBO J. 9, 3767-3775.
-
(1990)
EMBO J.
, vol.9
, pp. 3767-3775
-
-
Persson, C.1
Wagner, E.G.H.2
Nordström, K.3
-
61
-
-
0025274894
-
Control of CoIE1 plasmid replication: Binding of RNAI to RNA II and inhibition of primer formation
-
Tomizawa, J. (1990). Control of CoIE1 plasmid replication: binding of RNAI to RNA II and inhibition of primer formation. J. Mol. Biol. 212, 683-694.
-
(1990)
J. Mol. Biol.
, vol.212
, pp. 683-694
-
-
Tomizawa, J.1
-
62
-
-
0023973247
-
CUUCGG hairpins: Extraordinarily stable RNA secondary structures associated with various biochemical processes
-
Tuerk, C., et al., & Gold, L. (1988). CUUCGG hairpins: extraordinarily stable RNA secondary structures associated with various biochemical processes. Proc. Natl. Acad. Sci. USA 85, 1364-1367.
-
(1988)
Proc. Natl. Acad. Sci. USA
, vol.85
, pp. 1364-1367
-
-
Tuerk, C.1
Gold, L.2
-
63
-
-
0028004607
-
Crystal structure at 1.92 A resolution of the RNA-binding domain of the U1A spliceosomal protein complexed with an RNA hairpin
-
Oubridge, C., Ito, N., Evans, P.R., Teo, C.-H. & Nagai, K. (1994). Crystal structure at 1.92 A resolution of the RNA-binding domain of the U1A spliceosomal protein complexed with an RNA hairpin. Nature 372, 432-438.
-
(1994)
Nature
, vol.372
, pp. 432-438
-
-
Oubridge, C.1
Ito, N.2
Evans, P.R.3
Teo, C.-H.4
Nagai, K.5
-
64
-
-
0029920331
-
Specificity of ribonucleoprotein interaction determined by RNA folding during complex formation
-
Allain, F.H.T., Gubser, C.C., Howe, P.W.A., Nagai, K., Neuhaus, D. & Varani, G. (1996). Specificity of ribonucleoprotein interaction determined by RNA folding during complex formation. Nature 380, 646-650.
-
(1996)
Nature
, vol.380
, pp. 646-650
-
-
Allain, F.H.T.1
Gubser, C.C.2
Howe, P.W.A.3
Nagai, K.4
Neuhaus, D.5
Varani, G.6
-
65
-
-
0029058784
-
Determinants of RNA hairpin loop-loop complex stability
-
Gregorian, R.S.J. & Crothers, M.D. (1995). Determinants of RNA hairpin loop-loop complex stability. J. Mol. Biol. 248, 968-984.
-
(1995)
J. Mol. Biol.
, vol.248
, pp. 968-984
-
-
Gregorian, R.S.J.1
Crothers, M.D.2
-
66
-
-
0029001288
-
Bent helix formation between RNA hairpins with complementary loops
-
Marino, J.P., Gregorian, R.S.J., Csankovszki, G. & Crothers, M.D. (1995). Bent helix formation between RNA hairpins with complementary loops. Science 268, 1448-1454.
-
(1995)
Science
, vol.268
, pp. 1448-1454
-
-
Marino, J.P.1
Gregorian, R.S.J.2
Csankovszki, G.3
Crothers, M.D.4
-
67
-
-
0028294458
-
Involvement of a GNRA tetraloop in long-range RNA tertiary interactions
-
Jaeger, L., Michel, F. & Westhof, E. (1994). Involvement of a GNRA tetraloop in long-range RNA tertiary interactions. J. Mol. Biol. 236, 1271-1276.
-
(1994)
J. Mol. Biol.
, vol.236
, pp. 1271-1276
-
-
Jaeger, L.1
Michel, F.2
Westhof, E.3
-
68
-
-
0028037302
-
Model for an RNA tertiary interaction from the structure of an intermolecular complex between a GAAA tetraloop and an RNA helix
-
Pley, H.W., Flaherty, K.M. & McKay, D.B. (1994). Model for an RNA tertiary interaction from the structure of an intermolecular complex between a GAAA tetraloop and an RNA helix. Nature 372, 111-113.
-
(1994)
Nature
, vol.372
, pp. 111-113
-
-
Pley, H.W.1
Flaherty, K.M.2
McKay, D.B.3
-
69
-
-
0029935208
-
Comparative analysis of ribonuclease P RNA using gene sequences from natural microbial populations reveals tertiary structural elements
-
Brown, J.W., Nolan, J.M., Haas, E.S., Rubio, M.A.T., Major, F. & Pace, N.R. (1996). Comparative analysis of ribonuclease P RNA using gene sequences from natural microbial populations reveals tertiary structural elements. Proc. Natl. Acad. Sci. USA 93, 3001-3006.
-
(1996)
Proc. Natl. Acad. Sci. USA
, vol.93
, pp. 3001-3006
-
-
Brown, J.W.1
Nolan, J.M.2
Haas, E.S.3
Rubio, M.A.T.4
Major, F.5
Pace, N.R.6
-
70
-
-
0027104999
-
Recognition of the high affinity binding site in rev-responsive element RNA by the human immunodeficiency virus type-1 rev protein
-
Iwai, S., Pritchard, C., Mann, D.A., Karn, J. & Gait, M.J. (1992). Recognition of the high affinity binding site in rev-responsive element RNA by the human immunodeficiency virus type-1 rev protein. Nucleic Acids Res. 24, 6465-6472.
-
(1992)
Nucleic Acids Res.
, vol.24
, pp. 6465-6472
-
-
Iwai, S.1
Pritchard, C.2
Mann, D.A.3
Karn, J.4
Gait, M.J.5
-
71
-
-
0027203021
-
Minimal 16S rRNA binding site and role of conserved nucleotides in Escherichia coli ribosomal protein S8 recognition
-
Mougel, M., Allmang, C., Eyermann, F., Cachia, C., Ehresmann, B. & Ehresmann, C. (1993). Minimal 16S rRNA binding site and role of conserved nucleotides in Escherichia coli ribosomal protein S8 recognition. Eur. J. Biochem. 215, 787-792.
-
(1993)
Eur. J. Biochem.
, vol.215
, pp. 787-792
-
-
Mougel, M.1
Allmang, C.2
Eyermann, F.3
Cachia, C.4
Ehresmann, B.5
Ehresmann, C.6
-
72
-
-
0025171938
-
RNA bulges and the helical periodicity of double-stranded RNA
-
Bhattacharyya, A., Murchie, A.I.H. & Lilley, D.M. (1990). RNA bulges and the helical periodicity of double-stranded RNA. Nature 343, 484-487.
-
(1990)
Nature
, vol.343
, pp. 484-487
-
-
Bhattacharyya, A.1
Murchie, A.I.H.2
Lilley, D.M.3
-
73
-
-
0029913806
-
The influence of symmetric internal loops on the flexibility of RNA
-
Zacharias, M. & Hagerman, P.J. (1996). The influence of symmetric internal loops on the flexibility of RNA. J. Mol. Biol. 257, 276-289.
-
(1996)
J. Mol. Biol.
, vol.257
, pp. 276-289
-
-
Zacharias, M.1
Hagerman, P.J.2
-
74
-
-
0027439912
-
The conformation of loop e of eukaryotic 5S ribosomal RNA
-
Wimberly, B., Varani, G. & Tinoco, I., Jr. (1993). The conformation of loop E of eukaryotic 5S ribosomal RNA. Biochemistry 32 1078-1087.
-
(1993)
Biochemistry
, vol.32
, pp. 1078-1087
-
-
Wimberly, B.1
Varani, G.2
Tinoco Jr., I.3
-
75
-
-
0028300137
-
Visualization of tertiary structural domain of the Tetrahymena group i intron by electron microscopy
-
Wang, Y., Murphy, F.L., Cech, T.R. & Griffith, J.D. (1994). Visualization of tertiary structural domain of the Tetrahymena group I intron by electron microscopy. J. Mol. Biol. 236, 64-71.
-
(1994)
J. Mol. Biol.
, vol.236
, pp. 64-71
-
-
Wang, Y.1
Murphy, F.L.2
Cech, T.R.3
Griffith, J.D.4
-
76
-
-
0027193847
-
Movement of the guide sequence during RNA catalysis by a group i ribozyme
-
Wang, J.F., Downs, W.D. & Cech, T.R. (1993). Movement of the guide sequence during RNA catalysis by a group I ribozyme. Science 260, 504-508.
-
(1993)
Science
, vol.260
, pp. 504-508
-
-
Wang, J.F.1
Downs, W.D.2
Cech, T.R.3
-
77
-
-
0028011717
-
Molecular recognition of amino acids by RNA-aptamers: An L-citrulline binding RNA motif and its evolution into an L-arginine binder
-
Famulok, M. (1994). Molecular recognition of amino acids by RNA-aptamers: an L-citrulline binding RNA motif and its evolution into an L-arginine binder. J. Am. Chem. Soc. 116, 1698-1706.
-
(1994)
J. Am. Chem. Soc.
, vol.116
, pp. 1698-1706
-
-
Famulok, M.1
-
78
-
-
0029972909
-
Structural basis of ligand discrimination by two related RNA aptamers resolved by NMR spectroscopy
-
Yang, Y., Kochoyan, M., Burgstaller, P., Westhof, E. & Famulok, M. (1996). Structural basis of ligand discrimination by two related RNA aptamers resolved by NMR spectroscopy. Science 272, 1343-1347.
-
(1996)
Science
, vol.272
, pp. 1343-1347
-
-
Yang, Y.1
Kochoyan, M.2
Burgstaller, P.3
Westhof, E.4
Famulok, M.5
-
79
-
-
0027995790
-
Isolation of RNA aptamers for biological cofactors by in vitro selection
-
Burgstaller, P. & Famulok, M. (1994). Isolation of RNA aptamers for biological cofactors by in vitro selection. Angew. Chem. 33, 1084-1087.
-
(1994)
Angew. Chem.
, vol.33
, pp. 1084-1087
-
-
Burgstaller, P.1
Famulok, M.2
-
80
-
-
0029864853
-
Molecular recognition in the FMN-RNA aptamer complex
-
Fan, P., Suri, A.K., Fiala, R., Live, D. & Patel, DJ. (1996). Molecular recognition in the FMN-RNA aptamer complex. J. Mol. Biol. 258, 480-500.
-
(1996)
J. Mol. Biol.
, vol.258
, pp. 480-500
-
-
Fan, P.1
Suri, A.K.2
Fiala, R.3
Live, D.4
Patel, D.J.5
-
81
-
-
0029846259
-
Solution structure of mRNA hairpins promoting selenocysteine incorporation in Escherichia coli and their base-specific interaction with special elongation factor SELB
-
Hüttenhofer, A., Westhof, E. & Bock, A. (1996). Solution structure of mRNA hairpins promoting selenocysteine incorporation in Escherichia coli and their base-specific interaction with special elongation factor SELB. RNA 2, 354-366.
-
(1996)
RNA
, vol.2
, pp. 354-366
-
-
Hüttenhofer, A.1
Westhof, E.2
Bock, A.3
-
82
-
-
0029805895
-
A novel RNA structural motif in the selenocysteine insertion element of eukaryotic selenoprotein mRNAs
-
Walczak, R., Westhof, E., Carbon, P. & Krol, A. (1996). A novel RNA structural motif in the selenocysteine insertion element of eukaryotic selenoprotein mRNAs. RNA 2, 354-366.
-
(1996)
RNA
, vol.2
, pp. 354-366
-
-
Walczak, R.1
Westhof, E.2
Carbon, P.3
Krol, A.4
-
83
-
-
0028138280
-
Interactions of a small RNA with antibiotic and RNA ligands of the 30S subunit
-
Purohit, P. & Stern, S. (1994). Interactions of a small RNA with antibiotic and RNA ligands of the 30S subunit [see comments]. Nature 370, 659-662.
-
(1994)
Nature
, vol.370
, pp. 659-662
-
-
Purohit, P.1
Stern, S.2
-
84
-
-
0024280501
-
Dissecting the catalytic triad of a serine protease
-
Carter, P. & Wells, J.A. (1988). Dissecting the catalytic triad of a serine protease. Nature 332, 564-568.
-
(1988)
Nature
, vol.332
, pp. 564-568
-
-
Carter, P.1
Wells, J.A.2
-
85
-
-
0029036377
-
The catalytic mechanism and structure of thymidilate synthase
-
Carreras, C.W. & Santi, D.V. (1995). The catalytic mechanism and structure of thymidilate synthase. Annu. Rev. Biochem. 64, 721-762.
-
(1995)
Annu. Rev. Biochem.
, vol.64
, pp. 721-762
-
-
Carreras, C.W.1
Santi, D.V.2
-
86
-
-
0002849286
-
The structure of group i ribozymes
-
Eckstein, F. & Lilley, D.MJ., eds, Springer Verlag, Berlin
-
Jaeger, L., Michel, F. & Westhof, E. (1996). The structure of group I ribozymes. In Nucleic Acids and Molecular Biology. (Eckstein, F. & Lilley, D.MJ., eds), pp. 33-51, Springer Verlag, Berlin.
-
(1996)
Nucleic Acids and Molecular Biology.
, pp. 33-51
-
-
Jaeger, L.1
Michel, F.2
Westhof, E.3
-
87
-
-
0025300631
-
Minimum secondary structure requirements for catalytic activity of self-splicing group i intron
-
Beaudry, A.A. & Joyce, G.F. (1990). Minimum secondary structure requirements for catalytic activity of self-splicing group I intron. Biochemistry 29, 6534-6539.
-
(1990)
Biochemistry
, vol.29
, pp. 6534-6539
-
-
Beaudry, A.A.1
Joyce, G.F.2
-
88
-
-
0025993615
-
Function of P11, a tertiary base pairing in self-splicing introns of subgroup IA
-
Jaeger, L., Westhof, E. & Michel, F. (1991). Function of P11, a tertiary base pairing in self-splicing introns of subgroup IA. J. Mol. Biol. 221, 1153-1164.
-
(1991)
J. Mol. Biol.
, vol.221
, pp. 1153-1164
-
-
Jaeger, L.1
Westhof, E.2
Michel, F.3
-
89
-
-
0026639175
-
The Neurospora CYT-18 protein suppresses defects in the phage T4 td intron by stabilizing the catalytically active structure of the intron core
-
Mohr, G., Zhang, A., Gianelos, J.A., Belfort, M. & Lambowitz, A.M. (1992). The Neurospora CYT-18 protein suppresses defects in the phage T4 td intron by stabilizing the catalytically active structure of the intron core. Cell 69, 483-494.
-
(1992)
Cell
, vol.69
, pp. 483-494
-
-
Mohr, G.1
Zhang, A.2
Gianelos, J.A.3
Belfort, M.4
Lambowitz, A.M.5
-
90
-
-
0030595381
-
A tyrosyl-tRNA synthetase suppresses structural defects in the two major helical domains of the group i intron catalytic core
-
in press
-
Myers, C.A., et al., & Lambowitz, A.M. (1996). A tyrosyl-tRNA synthetase suppresses structural defects in the two major helical domains of the group I intron catalytic core. J. Mol. Biol. in press.
-
(1996)
J. Mol. Biol.
-
-
Myers, C.A.1
Lambowitz, A.M.2
-
91
-
-
0023794579
-
Selection and characterization of randomly produced mutants in the gene coding for M1 RNA
-
Lumelski, N. & Altman, S. (1988). Selection and characterization of randomly produced mutants in the gene coding for M1 RNA. J. Mol. Biol. 202, 443-454.
-
(1988)
J. Mol. Biol.
, vol.202
, pp. 443-454
-
-
Lumelski, N.1
Altman, S.2
-
92
-
-
0028316436
-
Peptide antibiotics of the tuberactinomycin family as inhibitors of group i intron RNA splicing
-
Wank, H., Rogers, J., Davies, J. & Schroeder, R. (1994). Peptide antibiotics of the tuberactinomycin family as inhibitors of group I intron RNA splicing. J. Mol. Biol. 236, 1001-1010.
-
(1994)
J. Mol. Biol.
, vol.236
, pp. 1001-1010
-
-
Wank, H.1
Rogers, J.2
Davies, J.3
Schroeder, R.4
-
93
-
-
0027186082
-
Splice-site selection and decoding: Are they related?
-
Schröeder, R., Streicher, B. & Wank, H. (1993). Splice-site selection and decoding: are they related? Science 260, 1443-1444.
-
(1993)
Science
, vol.260
, pp. 1443-1444
-
-
Schröeder, R.1
Streicher, B.2
Wank, H.3
-
94
-
-
0026656909
-
A tyrosyl-tRNA synthetase binds specifically to the group i intron catalytic core
-
Quo, Q. & Lambowitz, A.M. (1992). A tyrosyl-tRNA synthetase binds specifically to the group I intron catalytic core. Genes Dev. 6, 1357-1372.
-
(1992)
Genes Dev.
, vol.6
, pp. 1357-1372
-
-
Quo, Q.1
Lambowitz, A.M.2
-
95
-
-
0029869019
-
A tyrosyl-tRNA synthetase protein induces tertiary folding of the group i intron catalytic core
-
Caprara, M., Mohr, G. & Lambowitz, A.M. (1996). A tyrosyl-tRNA synthetase protein induces tertiary folding of the group I intron catalytic core. J. Mol. Biol. 257, 512-531.
-
(1996)
J. Mol. Biol.
, vol.257
, pp. 512-531
-
-
Caprara, M.1
Mohr, G.2
Lambowitz, A.M.3
-
96
-
-
33645843850
-
A new class of molecules for exploring the catalytical potential of RNA
-
Wright, M.C., Jaeger, L. & Joyce, G.F. (1995). A new class of molecules for exploring the catalytical potential of RNA. J. Cell. Biochem. Abstract Suppl. 19A, 228.
-
(1995)
J. Cell. Biochem. Abstract Suppl.
, vol.19 A
, pp. 228
-
-
Wright, M.C.1
Jaeger, L.2
Joyce, G.F.3
-
97
-
-
0028441183
-
Representation of the secondary and tertiary structure of group i introns
-
Cech, T.R., Damberger, S.H. & Gutell, R.R. (1994). Representation of the secondary and tertiary structure of group I introns. Nat. Struct. Biol. 1, 273-280.
-
(1994)
Nat. Struct. Biol.
, vol.1
, pp. 273-280
-
-
Cech, T.R.1
Damberger, S.H.2
Gutell, R.R.3
|