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Volumn 192, Issue 1, 2012, Pages 73-105

Nutritional control of growth and development in yeast

Author keywords

[No Author keywords available]

Indexed keywords

CARBON; CYCLIC AMP DEPENDENT PROTEIN KINASE; DNA DIRECTED RNA POLYMERASE; DNA DIRECTED RNA POLYMERASE III; GLUCOSE; NITROGEN; PHOSPHOPROTEIN PHOSPHATASE 1; PROTEIN KINASE B; RAS PROTEIN; RNA POLYMERASE II;

EID: 84866076360     PISSN: 00166731     EISSN: 19432631     Source Type: Journal    
DOI: 10.1534/genetics.111.135731     Document Type: Review
Times cited : (491)

References (265)
  • 1
    • 1842790124 scopus 로고    scopus 로고
    • The glucose-regulated nuclear localization of hexokinase 2 in Saccharomyces cerevisiae is Mig1-dependent
    • Ahuatzi, D., P. Herrero, T. de la Cera, and F. Moreno, 2004 The glucose-regulated nuclear localization of hexokinase 2 in Saccharomyces cerevisiae is Mig1-dependent. J. Biol. Chem. 279: 14440-14446.
    • (2004) J. Biol. Chem. , vol.279 , pp. 14440-14446
    • Ahuatzi, D.1    Herrero, P.2    de la Cera, T.3    Moreno, F.4
  • 2
    • 33947493105 scopus 로고    scopus 로고
    • Hxk2 regulates the phosphorylation state of Mig1 and therefore its nucleocytoplasmic distribution
    • Ahuatzi, D., A. Riera, R. Pelaez, P. Herrero, and F. Moreno, 2007 Hxk2 regulates the phosphorylation state of Mig1 and therefore its nucleocytoplasmic distribution. J. Biol. Chem. 282: 4485-4493.
    • (2007) J. Biol. Chem. , vol.282 , pp. 4485-4493
    • Ahuatzi, D.1    Riera, A.2    Pelaez, R.3    Herrero, P.4    Moreno, F.5
  • 3
    • 33745048235 scopus 로고    scopus 로고
    • Release of extraction-resistant mRNA in stationary phase Saccharomyces cerevisiae produces a massive increase in transcript abundance in response to stress
    • Aragon, A. D., G. A. Quinones, E. V. Thomas, S. Roy, and M. Werner-Washburne, 2006 Release of extraction-resistant mRNA in stationary phase Saccharomyces cerevisiae produces a massive increase in transcript abundance in response to stress. Genome Biol. 7: R9.
    • (2006) Genome Biol. , vol.7
    • Aragon, A.D.1    Quinones, G.A.2    Thomas, E.V.3    Roy, S.4    Werner-Washburne, M.5
  • 4
    • 83455225621 scopus 로고    scopus 로고
    • Reconsidering movement of eukaryotic mRNAs between polysomes and P bodies
    • Arribere, J. A., J. A. Doudna, and W. V. Gilbert, 2011 Reconsidering movement of eukaryotic mRNAs between polysomes and P bodies. Mol. Cell 44: 745-758.
    • (2011) Mol. Cell , vol.44 , pp. 745-758
    • Arribere, J.A.1    Doudna, J.A.2    Gilbert, W.V.3
  • 5
    • 0033870805 scopus 로고    scopus 로고
    • Sip2p and its partner snf1p kinase affect aging in S. cerevisiae.
    • Ashrafi, K., S. S. Lin, J. K. Manchester, and J. I. Gordon, 2000 Sip2p and its partner snf1p kinase affect aging in S. cerevisiae. Genes Dev. 14: 1872-1885.
    • (2000) Genes Dev. , vol.14 , pp. 1872-1885
    • Ashrafi, K.1    Lin, S.S.2    Manchester, J.K.3    Gordon, J.I.4
  • 6
    • 57749121616 scopus 로고    scopus 로고
    • A library of yeast transcription factor motifs reveals a widespread function for Rsc3 in targeting nucleosome exclusion at promoters
    • Badis, G., E. T. Chan, H. van Bakel, L. Pena-Castillo, D. Tillo et al., 2008 A library of yeast transcription factor motifs reveals a widespread function for Rsc3 in targeting nucleosome exclusion at promoters. Mol. Cell 32: 878-887.
    • (2008) Mol. Cell , vol.32 , pp. 878-887
    • Badis, G.1    Chan, E.T.2    van Bakel, H.3    Pena-Castillo, L.4    Tillo, D.5
  • 8
    • 0033540030 scopus 로고    scopus 로고
    • The TOR signalling pathway controls nuclear localization of nutrient-regulated transcription factors
    • Beck, T., and M. N. Hall, 1999 The TOR signalling pathway controls nuclear localization of nutrient-regulated transcription factors. Nature 402: 689-692.
    • (1999) Nature , vol.402 , pp. 689-692
    • Beck, T.1    Hall, M.N.2
  • 9
    • 34547914089 scopus 로고    scopus 로고
    • Glucose controls multiple processes in Saccharomyces cerevisiae through diverse combinations of signaling pathways
    • Belinchon, M. M., and J. M. Gancedo, 2007 Glucose controls multiple processes in Saccharomyces cerevisiae through diverse combinations of signaling pathways. FEMS Yeast Res. 7: 808-818.
    • (2007) FEMS Yeast Res. , vol.7 , pp. 808-818
    • Belinchon, M.M.1    Gancedo, J.M.2
  • 10
    • 55449104987 scopus 로고    scopus 로고
    • Stress-activated genomic expression changes serve a preparative role for impending stress in yeast
    • Berry, D. B., and A. P. Gasch, 2008 Stress-activated genomic expression changes serve a preparative role for impending stress in yeast. Mol. Biol. Cell 19: 4580-4587.
    • (2008) Mol. Biol. Cell , vol.19 , pp. 4580-4587
    • Berry, D.B.1    Gasch, A.P.2
  • 11
    • 0034680772 scopus 로고    scopus 로고
    • Tripartite regulation of Gln3p by TOR, Ure2p, and phosphatases
    • Bertram, P. G., J. H. Choi, J. Carvalho, W. Ai, C. Zeng et al., 2000 Tripartite regulation of Gln3p by TOR, Ure2p, and phosphatases. J. Biol. Chem. 275: 35727-35733.
    • (2000) J. Biol. Chem. , vol.275 , pp. 35727-35733
    • Bertram, P.G.1    Choi, J.H.2    Carvalho, J.3    Ai, W.4    Zeng, C.5
  • 12
  • 13
    • 0038094501 scopus 로고    scopus 로고
    • Nucleosomes unfold completely at a transcriptionally active promoter
    • Boeger, H., J. Griesenbeck, J. S. Strattan, and R. D. Kornberg, 2003 Nucleosomes unfold completely at a transcriptionally active promoter. Mol. Cell 11: 1587-1598.
    • (2003) Mol. Cell , vol.11 , pp. 1587-1598
    • Boeger, H.1    Griesenbeck, J.2    Strattan, J.S.3    Kornberg, R.D.4
  • 14
    • 44349186331 scopus 로고    scopus 로고
    • Influence of genotype and nutrition on survival and metabolism of starving yeast
    • Boer, V. M., S. Amini, and D. Botstein, 2008 Influence of genotype and nutrition on survival and metabolism of starving yeast. Proc. Natl. Acad. Sci. USA 105: 6930-6935.
    • (2008) Proc. Natl. Acad. Sci. USA , vol.105 , pp. 6930-6935
    • Boer, V.M.1    Amini, S.2    Botstein, D.3
  • 15
    • 75649152860 scopus 로고    scopus 로고
    • Growth-limiting intracellular metabolites in yeast growing under diverse nutrient limitations
    • Boer, V. M., C. A. Crutchfield, P. H. Bradley, D. Botstein, and J. D. Rabinowitz, 2010 Growth-limiting intracellular metabolites in yeast growing under diverse nutrient limitations. Mol. Biol. Cell 21: 198-211.
    • (2010) Mol. Biol. Cell , vol.21 , pp. 198-211
    • Boer, V.M.1    Crutchfield, C.A.2    Bradley, P.H.3    Botstein, D.4    Rabinowitz, J.D.5
  • 16
    • 32644449540 scopus 로고    scopus 로고
    • Target hub proteins serve as master regulators of development in yeast
    • Borneman, A. R., J. A. Leigh-Bell, H. Yu, P. Bertone, M. Gerstein et al., 2006 Target hub proteins serve as master regulators of development in yeast. Genes Dev. 20: 435-448.
    • (2006) Genes Dev. , vol.20 , pp. 435-448
    • Borneman, A.R.1    Leigh-Bell, J.A.2    Yu, H.3    Bertone, P.4    Gerstein, M.5
  • 17
    • 59149103774 scopus 로고    scopus 로고
    • Coordinated concentration changes of transcripts and metabolites in Saccharomyces cerevisiae
    • Bradley, P. H., M. J. Brauer, J. D. Rabinowitz, and O. G. Troyanskaya, 2009 Coordinated concentration changes of transcripts and metabolites in Saccharomyces cerevisiae. PLOS Comput. Biol. 5: e1000270.
    • (2009) PLOS Comput. Biol. , vol.5
    • Bradley, P.H.1    Brauer, M.J.2    Rabinowitz, J.D.3    Troyanskaya, O.G.4
  • 18
    • 18244376808 scopus 로고    scopus 로고
    • Homeostatic adjustment and metabolic remodeling in glucose-limited yeast cultures
    • Brauer, M. J., A. J. Saldanha, K. Dolinski, and D. Botstein, 2005 Homeostatic adjustment and metabolic remodeling in glucose-limited yeast cultures. Mol. Biol. Cell 16: 2503-2517.
    • (2005) Mol. Biol. Cell , vol.16 , pp. 2503-2517
    • Brauer, M.J.1    Saldanha, A.J.2    Dolinski, K.3    Botstein, D.4
  • 19
    • 33845870439 scopus 로고    scopus 로고
    • Conservation of the metabolomic response to starvation across two divergent microbes
    • Brauer, M. J., J. Yuan, B. D. Bennett, W. Lu, E. Kimball et al., 2006 Conservation of the metabolomic response to starvation across two divergent microbes. Proc. Natl. Acad. Sci. USA 103: 19302-19307.
    • (2006) Proc. Natl. Acad. Sci. USA , vol.103 , pp. 19302-19307
    • Brauer, M.J.1    Yuan, J.2    Bennett, B.D.3    Lu, W.4    Kimball, E.5
  • 20
    • 38749112941 scopus 로고    scopus 로고
    • Coordination of growth rate, cell cycle, stress response, and metabolic activity in yeast
    • Brauer, M. J., C. Huttenhower, E. M. Airoldi, R. Rosenstein, J. C. Matese et al., 2008 Coordination of growth rate, cell cycle, stress response, and metabolic activity in yeast. Mol. Biol. Cell 19: 352-367.
    • (2008) Mol. Biol. Cell , vol.19 , pp. 352-367
    • Brauer, M.J.1    Huttenhower, C.2    Airoldi, E.M.3    Rosenstein, R.4    Matese, J.C.5
  • 21
    • 77953077420 scopus 로고    scopus 로고
    • A global protein kinase and phosphatase interaction network in yeast
    • Breitkreutz, A., H. Choi, J. R. Sharom, L. Boucher, V. Neduva et al., 2010 A global protein kinase and phosphatase interaction network in yeast. Science 328: 1043-1046.
    • (2010) Science , vol.328 , pp. 1043-1046
    • Breitkreutz, A.1    Choi, H.2    Sharom, J.R.3    Boucher, L.4    Neduva, V.5
  • 22
    • 0025253769 scopus 로고
    • The function of ras genes in Saccharomyces cerevisiae
    • Broach, J. R., and R. J. Deschenes, 1990 The function of ras genes in Saccharomyces cerevisiae. Adv. Cancer Res. 54: 79-139.
    • (1990) Adv. Cancer Res. , vol.54 , pp. 79-139
    • Broach, J.R.1    Deschenes, R.J.2
  • 23
    • 83355169645 scopus 로고    scopus 로고
    • Choosing the right lifestyle: Adhesion and development in Saccharomyces cerevisiae
    • Bruckner, S., and H. U. Mosch, 2011 Choosing the right lifestyle: adhesion and development in Saccharomyces cerevisiae. FEMS Microbiol. Rev. 36: 25-58.
    • (2011) FEMS Microbiol. Rev. , vol.36 , pp. 25-58
    • Bruckner, S.1    Mosch, H.U.2
  • 24
    • 78149345328 scopus 로고    scopus 로고
    • Nutrient control of yeast PKA activity involves opposing effects on phosphorylation of the Bcy1 regulatory subunit
    • Budhwar, R., A. Lu, and J. P. Hirsch, 2010 Nutrient control of yeast PKA activity involves opposing effects on phosphorylation of the Bcy1 regulatory subunit. Mol. Biol. Cell 21: 3749-3758.
    • (2010) Mol. Biol. Cell , vol.21 , pp. 3749-3758
    • Budhwar, R.1    Lu, A.2    Hirsch, J.P.3
  • 25
    • 2442645050 scopus 로고    scopus 로고
    • The Ras/cAMP-dependent protein kinase signaling pathway regulates an early step of the autophagy process in Saccharomyces cerevisiae
    • Budovskaya, Y. V., J. S. Stephan, F. Reggiori, D. J. Klionsky, and P. K. Herman, 2004 The Ras/cAMP-dependent protein kinase signaling pathway regulates an early step of the autophagy process in Saccharomyces cerevisiae. J. Biol. Chem. 279: 20663-20671.
    • (2004) J. Biol. Chem. , vol.279 , pp. 20663-20671
    • Budovskaya, Y.V.1    Stephan, J.S.2    Reggiori, F.3    Klionsky, D.J.4    Herman, P.K.5
  • 26
    • 25444459688 scopus 로고    scopus 로고
    • An evolutionary proteomics approach identifies substrates of the cAMP-dependent protein kinase
    • Budovskaya, Y. V., J. S. Stephan, S. J. Deminoff, and P. K. Herman, 2005 An evolutionary proteomics approach identifies substrates of the cAMP-dependent protein kinase. Proc. Natl. Acad. Sci. USA 102: 13933-13938.
    • (2005) Proc. Natl. Acad. Sci. USA , vol.102 , pp. 13933-13938
    • Budovskaya, Y.V.1    Stephan, J.S.2    Deminoff, S.J.3    Herman, P.K.4
  • 27
    • 70849098812 scopus 로고    scopus 로고
    • Toggle involving cis-interfering noncoding RNAs controls variegated gene expression in yeast
    • Bumgarner, S. L., R. D. Dowell, P. Grisafi, D. K. Gifford, and G. R. Fink, 2009 Toggle involving cis-interfering noncoding RNAs controls variegated gene expression in yeast. Proc. Natl. Acad. Sci. USA 106: 18321-18326.
    • (2009) Proc. Natl. Acad. Sci. USA , vol.106 , pp. 18321-18326
    • Bumgarner, S.L.1    Dowell, R.D.2    Grisafi, P.3    Gifford, D.K.4    Fink, G.R.5
  • 28
    • 0033573016 scopus 로고    scopus 로고
    • The TOR signaling cascade regulates gene expression in response to nutrients
    • Cardenas, M. E., N. S. Cutler, M. C. Lorenz, C. J. Di Como, and J. Heitman, 1999 The TOR signaling cascade regulates gene expression in response to nutrients. Genes Dev. 13: 3271-3279.
    • (1999) Genes Dev. , vol.13 , pp. 3271-3279
    • Cardenas, M.E.1    Cutler, N.S.2    Lorenz, M.C.3    Di Como, C.J.4    Heitman, J.5
  • 29
    • 79959457450 scopus 로고    scopus 로고
    • Regulation of phospholipid synthesis in the yeast Saccharomyces cerevisiae
    • Carman, G. M., and G. S. Han, 2010 Regulation of phospholipid synthesis in the yeast Saccharomyces cerevisiae. Annu. Rev. Biochem. 80: 859-883.
    • (2010) Annu. Rev. Biochem. , vol.80 , pp. 859-883
    • Carman, G.M.1    Han, G.S.2
  • 30
    • 33744987171 scopus 로고    scopus 로고
    • Feedback control of morphogenesis in fungi by aromatic alcohols
    • Chen, H., and G. R. Fink, 2006 Feedback control of morphogenesis in fungi by aromatic alcohols. Genes Dev. 20: 1150-1161.
    • (2006) Genes Dev. , vol.20 , pp. 1150-1161
    • Chen, H.1    Fink, G.R.2
  • 31
    • 67649484365 scopus 로고    scopus 로고
    • Structural insight into the autoinhibition mechanism of AMP-activated protein kinase
    • Chen, L., Z. H. Jiao, L. S. Zheng, Y. Y. Zhang, S. T. Xie et al., 2009 Structural insight into the autoinhibition mechanism of AMP-activated protein kinase. Nature 459: 1146-1149.
    • (2009) Nature , vol.459 , pp. 1146-1149
    • Chen, L.1    Jiao, Z.H.2    Zheng, L.S.3    Zhang, Y.Y.4    Xie, S.T.5
  • 32
    • 34347387832 scopus 로고    scopus 로고
    • Restriction of DNA replication to the reductive phase of the metabolic cycle protects genome integrity
    • Chen, Z., E. A. Odstrcil, B. P. Tu, and S. L. McKnight, 2007 Restriction of DNA replication to the reductive phase of the metabolic cycle protects genome integrity. Science 316: 1916-1919.
    • (2007) Science , vol.316 , pp. 1916-1919
    • Chen, Z.1    Odstrcil, E.A.2    Tu, B.P.3    McKnight, S.L.4
  • 33
    • 77953414533 scopus 로고    scopus 로고
    • Snf1 promotes phosphorylation of the alpha subunit of eukaryotic translation initiation factor 2 by activating Gcn2 and inhibiting phosphatases Glc7 and Sit4
    • Cherkasova, V., H. Qiu, and A. G. Hinnebusch, 2010 Snf1 promotes phosphorylation of the alpha subunit of eukaryotic translation initiation factor 2 by activating Gcn2 and inhibiting phosphatases Glc7 and Sit4. Mol. Cell. Biol. 30: 2862-2873.
    • (2010) Mol. Cell. Biol. , vol.30 , pp. 2862-2873
    • Cherkasova, V.1    Qiu, H.2    Hinnebusch, A.G.3
  • 34
    • 1642441342 scopus 로고    scopus 로고
    • Molecular genetic perspectives on cross-talk and specificity in abiotic stress signalling in plants
    • Chinnusamy, V., K. Schumaker, and J. K. Zhu, 2004 Molecular genetic perspectives on cross-talk and specificity in abiotic stress signalling in plants. J. Exp. Bot. 55: 225-236.
    • (2004) J. Exp. Bot. , vol.55 , pp. 225-236
    • Chinnusamy, V.1    Schumaker, K.2    Zhu, J.K.3
  • 35
    • 0742270606 scopus 로고    scopus 로고
    • Tor pathway regulates Rrn3p-dependent recruitment of yeast RNA polymerase I to the promoter but does not participate in alteration of the number of active genes
    • Claypool, J. A., S. L. French, K. Johzuka, K. Eliason, L. Vu et al., 2004 Tor pathway regulates Rrn3p-dependent recruitment of yeast RNA polymerase I to the promoter but does not participate in alteration of the number of active genes. Mol. Biol. Cell 15: 946-956.
    • (2004) Mol. Biol. Cell , vol.15 , pp. 946-956
    • Claypool, J.A.1    French, S.L.2    Johzuka, K.3    Eliason, K.4    Vu, L.5
  • 36
    • 0032526715 scopus 로고    scopus 로고
    • Involvement of distinct G-proteins, Gpa2 and Ras, in glucose-and intracellular acidification-induced cAMP signalling in the yeast Saccharomyces cerevisiae
    • Colombo, S., P. Ma, L. Cauwenberg, J. Winderickx, M. Crauwels et al., 1998 Involvement of distinct G-proteins, Gpa2 and Ras, in glucose-and intracellular acidification-induced cAMP signalling in the yeast Saccharomyces cerevisiae. EMBO J. 17: 3326-3341.
    • (1998) EMBO J. , vol.17 , pp. 3326-3341
    • Colombo, S.1    Ma, P.2    Cauwenberg, L.3    Winderickx, J.4    Crauwels, M.5
  • 37
    • 0024392359 scopus 로고
    • Two different chromatin structures coexist in ribosomal RNA genes throughout the cell cycle
    • Conconi, A., R. M. Widmer, T. Koller, and J. M. Sogo, 1989 Two different chromatin structures coexist in ribosomal RNA genes throughout the cell cycle. Cell 57: 753-761.
    • (1989) Cell , vol.57 , pp. 753-761
    • Conconi, A.1    Widmer, R.M.2    Koller, T.3    Sogo, J.M.4
  • 38
    • 0036024577 scopus 로고    scopus 로고
    • Transmitting the signal of excess nitrogen in Saccharomyces cerevisiae from the Tor proteins to the GATA factors: Connecting the dots
    • Cooper, T. G., 2002 Transmitting the signal of excess nitrogen in Saccharomyces cerevisiae from the Tor proteins to the GATA factors: connecting the dots. FEMS Microbiol. Rev. 26: 223-238.
    • (2002) FEMS Microbiol. Rev. , vol.26 , pp. 223-238
    • Cooper, T.G.1
  • 39
    • 0037076314 scopus 로고    scopus 로고
    • The TOR-controlled transcription activators GLN3, RTG1, and RTG3 are regulated in response to intracellular levels of glutamine
    • Crespo, J. L., T. Powers, B. Fowler, and M. N. Hall, 2002 The TOR-controlled transcription activators GLN3, RTG1, and RTG3 are regulated in response to intracellular levels of glutamine. Proc. Natl. Acad. Sci. USA 99: 6784-6789.
    • (2002) Proc. Natl. Acad. Sci. USA , vol.99 , pp. 6784-6789
    • Crespo, J.L.1    Powers, T.2    Fowler, B.3    Hall, M.N.4
  • 40
    • 0027270476 scopus 로고
    • Chromatin structures and transcription of rDNA in yeast Saccharomyces cerevisiae
    • Dammann, R., R. Lucchini, T. Koller, and J.M. Sogo, 1993 Chromatin structures and transcription of rDNA in yeast Saccharomyces cerevisiae. Nucleic Acids Res. 21: 2331-2338.
    • (1993) Nucleic Acids Res. , vol.21 , pp. 2331-2338
    • Dammann, R.1    Lucchini, R.2    Koller, T.3    Sogo, J.M.4
  • 41
    • 79955759406 scopus 로고    scopus 로고
    • Therapeutic targeting of cancer cell metabolism
    • Dang, C. V., M. Hamaker, P. Sun, A. Le, and P. Gao, 2011 Therapeutic targeting of cancer cell metabolism. J. Mol. Med. 89: 205-212.
    • (2011) J. Mol. Med. , vol.89 , pp. 205-212
    • Dang, C.V.1    Hamaker, M.2    Sun, P.3    Le, A.4    Gao, P.5
  • 42
    • 78650154466 scopus 로고    scopus 로고
    • Microautophagy of the nucleus coincides with a vacuolar diffusion barrier at nuclear-vacuolar junctions
    • Dawaliby, R., and A. Mayer, 2010 Microautophagy of the nucleus coincides with a vacuolar diffusion barrier at nuclear-vacuolar junctions. Mol. Biol. Cell 21: 4173-4183.
    • (2010) Mol. Biol. Cell , vol.21 , pp. 4173-4183
    • Dawaliby, R.1    Mayer, A.2
  • 43
    • 84856753762 scopus 로고    scopus 로고
    • The essence of yeast quiescence
    • De Virgilio, C., 2011 The essence of yeast quiescence. FEMS Microbiol. Rev. 36: 306-339.
    • (2011) FEMS Microbiol. Rev. , vol.36 , pp. 306-339
    • de Virgilio, C.1
  • 44
    • 33646538482 scopus 로고    scopus 로고
    • The TOR signalling network from yeast to man
    • De Virgilio, C., and R. Loewith, 2006a The TOR signalling network from yeast to man. Int. J. Biochem. Cell Biol. 38: 1476-1481.
    • (2006) Int. J. Biochem. Cell Biol. , vol.38 , pp. 1476-1481
    • de Virgilio, C.1    Loewith, R.2
  • 45
    • 33750042303 scopus 로고    scopus 로고
    • Cell growth control: Little eukaryotes make big contributions
    • De Virgilio, C., and R. Loewith, 2006b Cell growth control: little eukaryotes make big contributions. Oncogene 25: 6392-6415.
    • (2006) Oncogene , vol.25 , pp. 6392-6415
    • de Virgilio, C.1    Loewith, R.2
  • 46
    • 28644434811 scopus 로고    scopus 로고
    • A dual role for PP1 in shaping the Msn2-dependent transcriptional response to glucose starvation
    • De Wever, V., W. Reiter, A. Ballarini, G. Ammerer, and C. Brocard, 2005 A dual role for PP1 in shaping the Msn2-dependent transcriptional response to glucose starvation. EMBO J. 24: 4115-4123.
    • (2005) EMBO J. , vol.24 , pp. 4115-4123
    • de Wever, V.1    Reiter, W.2    Ballarini, A.3    Ammerer, G.4    Brocard, C.5
  • 47
    • 77955405903 scopus 로고    scopus 로고
    • Cytosolic pH is a second messenger for glucose and regulates the PKA pathway through V-ATPase
    • Dechant, R., M. Binda, S. S. Lee, S. Pelet, J. Winderickx et al., 2010 Cytosolic pH is a second messenger for glucose and regulates the PKA pathway through V-ATPase. EMBO J. 29: 2515-2526.
    • (2010) EMBO J. , vol.29 , pp. 2515-2526
    • Dechant, R.1    Binda, M.2    Lee, S.S.3    Pelet, S.4    Winderickx, J.5
  • 48
    • 0030669030 scopus 로고    scopus 로고
    • Exploring the metabolic and genetic control of gene expression on a genomic scale
    • DeRisi, J. L., V. R. Iyer, and P. O. Brown, 1997 Exploring the metabolic and genetic control of gene expression on a genomic scale. Science 278: 680-686.
    • (1997) Science , vol.278 , pp. 680-686
    • Derisi, J.L.1    Iyer, V.R.2    Brown, P.O.3
  • 49
    • 0029808294 scopus 로고    scopus 로고
    • Nutrients, via the Tor proteins, stimulate the association of Tap42 with type 2A phosphatases
    • Di Como, C. J., and K. T. Arndt, 1996 Nutrients, via the Tor proteins, stimulate the association of Tap42 with type 2A phosphatases. Genes Dev. 10: 1904-1916.
    • (1996) Genes Dev. , vol.10 , pp. 1904-1916
    • Di Como, C.J.1    Arndt, K.T.2
  • 50
    • 0037845131 scopus 로고    scopus 로고
    • Glucose-induced stimulation of the Ras-cAMP pathway in yeast leads to multiple phosphorylations and activation of 6-phosphofructo-2-kinase
    • Dihazi, H., R. Kessler, and K. Eschrich, 2003 Glucose-induced stimulation of the Ras-cAMP pathway in yeast leads to multiple phosphorylations and activation of 6-phosphofructo-2-kinase. Biochemistry 42: 6275-6282.
    • (2003) Biochemistry , vol.42 , pp. 6275-6282
    • Dihazi, H.1    Kessler, R.2    Eschrich, K.3
  • 51
    • 8744281675 scopus 로고    scopus 로고
    • Tor signaling and nutrient-based signals converge on Mks1p phosphorylation to regulate expression of Rtg1. Rtg3p-dependent target genes
    • Dilova, I., S. Aronova, J. C. Chen, and T. Powers, 2004 Tor signaling and nutrient-based signals converge on Mks1p phosphorylation to regulate expression of Rtg1. Rtg3p-dependent target genes. J. Biol. Chem. 279: 46527-46535.
    • (2004) J. Biol. Chem. , vol.279 , pp. 46527-46535
    • Dilova, I.1    Aronova, S.2    Chen, J.C.3    Powers, T.4
  • 52
    • 4644360186 scopus 로고    scopus 로고
    • The Reg1-interacting proteins, Bmh1, Bmh2, Ssb1, and Ssb2, have roles in maintaining glucose repression in Saccharomyces cerevisiae
    • Dombek, K. M., N. Kacherovsky, and E. T. Young, 2004 The Reg1-interacting proteins, Bmh1, Bmh2, Ssb1, and Ssb2, have roles in maintaining glucose repression in Saccharomyces cerevisiae. J. Biol. Chem. 279: 39165-39174.
    • (2004) J. Biol. Chem. , vol.279 , pp. 39165-39174
    • Dombek, K.M.1    Kacherovsky, N.2    Young, E.T.3
  • 53
    • 0041689887 scopus 로고    scopus 로고
    • Palmitoylation and plasma membrane localization of Ras2p by a nonclassical trafficking pathway in Saccharomyces cerevisiae
    • Dong, X., D. A. Mitchell, S. Lobo, L. Zhao, D. J. Bartels et al., 2003 Palmitoylation and plasma membrane localization of Ras2p by a nonclassical trafficking pathway in Saccharomyces cerevisiae. Mol. Cell. Biol. 23: 6574-6584.
    • (2003) Mol. Cell. Biol. , vol.23 , pp. 6574-6584
    • Dong, X.1    Mitchell, D.A.2    Lobo, S.3    Zhao, L.4    Bartels, D.J.5
  • 54
    • 21244448694 scopus 로고    scopus 로고
    • The TOR and EGO protein complexes orchestrate microautophagy in yeast
    • Dubouloz, F., O. Deloche, V. Wanke, E. Cameroni, and C. De Virgilio, 2005 The TOR and EGO protein complexes orchestrate microautophagy in yeast. Mol. Cell 19: 15-26.
    • (2005) Mol. Cell , vol.19 , pp. 15-26
    • Dubouloz, F.1    Deloche, O.2    Wanke, V.3    Cameroni, E.4    de Virgilio, C.5
  • 56
    • 17344381954 scopus 로고    scopus 로고
    • Multiple roles of Tap42 in mediating rapamycin-induced transcriptional changes in yeast
    • Duvel, K., A. Santhanam, S. Garrett, L. Schneper, and J. R. Broach, 2003 Multiple roles of Tap42 in mediating rapamycin-induced transcriptional changes in yeast. Mol. Cell 11: 1467-1478.
    • (2003) Mol. Cell , vol.11 , pp. 1467-1478
    • Duvel, K.1    Santhanam, A.2    Garrett, S.3    Schneper, L.4    Broach, J.R.5
  • 57
    • 0042970750 scopus 로고    scopus 로고
    • Grr1-dependent inactivation of Mth1 mediates glucose-induced dissociation of Rgt1 from HXT gene promoters
    • Flick, K. M., N. Spielewoy, T. I. Kalashnikova, M. Guaderrama, Q. Zhu et al., 2003 Grr1-dependent inactivation of Mth1 mediates glucose-induced dissociation of Rgt1 from HXT gene promoters. Mol. Biol. Cell 14: 3230-3241.
    • (2003) Mol. Biol. Cell , vol.14 , pp. 3230-3241
    • Flick, K.M.1    Spielewoy, N.2    Kalashnikova, T.I.3    Guaderrama, M.4    Zhu, Q.5
  • 58
    • 0024713582 scopus 로고
    • Identification and characterization of HAP4: A third component of the CCAAT-bound HAP2/HAP3 heteromer
    • Forsburg, S. L., and L. Guarente, 1989 Identification and characterization of HAP4: a third component of the CCAAT-bound HAP2/HAP3 heteromer. Genes Dev. 3: 1166-1178.
    • (1989) Genes Dev. , vol.3 , pp. 1166-1178
    • Forsburg, S.L.1    Guarente, L.2
  • 59
    • 66149105187 scopus 로고    scopus 로고
    • Microarray profiling of phage-display selections for rapid mapping of transcription factor-DNA interactions
    • Freckleton, G., S. I. Lippman, J. R. Broach, and S. Tavazoie, 2009 Microarray profiling of phage-display selections for rapid mapping of transcription factor-DNA interactions. PLoS Genet. 5: e1000449.
    • (2009) PLoS Genet. , vol.5
    • Freckleton, G.1    Lippman, S.I.2    Broach, J.R.3    Tavazoie, S.4
  • 60
    • 33645228192 scopus 로고    scopus 로고
    • Glc7-Reg1 phosphatase signals to Yck1,2 casein kinase 1 to regulate transport activity and glucose-induced inactivation of Saccharomyces maltose permease
    • Gadura, N., L. C. Robinson, and C. A. Michels, 2006 Glc7-Reg1 phosphatase signals to Yck1,2 casein kinase 1 to regulate transport activity and glucose-induced inactivation of Saccharomyces maltose permease. Genetics 172: 1427-1439.
    • (2006) Genetics , vol.172 , pp. 1427-1439
    • Gadura, N.1    Robinson, L.C.2    Michels, C.A.3
  • 61
    • 0035175540 scopus 로고    scopus 로고
    • Control of pseudohyphae formation in Saccharomyces cerevisiae
    • Gancedo, J. M., 2001 Control of pseudohyphae formation in Saccharomyces cerevisiae. FEMS Microbiol. Rev. 25: 107-123.
    • (2001) FEMS Microbiol. Rev. , vol.25 , pp. 107-123
    • Gancedo, J.M.1
  • 62
    • 0024723687 scopus 로고
    • Loss of Ras activity in Saccharomyces cerevisiae is suppressed by disruptions of a new kinase gene, YAKI, whose product may act downstream of the cAMPdependent protein kinase
    • Garrett, S., and J. Broach, 1989 Loss of Ras activity in Saccharomyces cerevisiae is suppressed by disruptions of a new kinase gene, YAKI, whose product may act downstream of the cAMPdependent protein kinase. Genes Dev. 3: 1336-1348.
    • (1989) Genes Dev. , vol.3 , pp. 1336-1348
    • Garrett, S.1    Broach, J.2
  • 63
    • 0025851170 scopus 로고
    • The Saccharomyces cerevisiae YAK1 gene encodes a protein kinase that is induced by arrest early in the cell cycle
    • Garrett, S., M. M. Menold, and J. R. Broach, 1991 The Saccharomyces cerevisiae YAK1 gene encodes a protein kinase that is induced by arrest early in the cell cycle. Mol. Cell. Biol. 11: 4045-4052.
    • (1991) Mol. Cell. Biol. , vol.11 , pp. 4045-4052
    • Garrett, S.1    Menold, M.M.2    Broach, J.R.3
  • 64
    • 0033637153 scopus 로고    scopus 로고
    • Genomic expression programs in the response of yeast cells to environmental changes
    • Gasch, A. P., P. T. Spellman, C. M. Kao, O. Carmel-Harel, M. B. Eisen et al., 2000 Genomic expression programs in the response of yeast cells to environmental changes. Mol. Biol. Cell 11: 4241-4257.
    • (2000) Mol. Biol. Cell , vol.11 , pp. 4241-4257
    • Gasch, A.P.1    Spellman, P.T.2    Kao, C.M.3    Carmel-Harel, O.4    Eisen, M.B.5
  • 65
    • 62549113091 scopus 로고    scopus 로고
    • Nitrogen catabolite repression-sensitive transcription as a readout of Tor pathway regulation: The genetic background, reporter gene and GATA factor assayed determine the outcomes
    • Georis, I., A. Feller, J. J. Tate, T. G. Cooper, and E. Dubois, 2009 Nitrogen catabolite repression-sensitive transcription as a readout of Tor pathway regulation: the genetic background, reporter gene and GATA factor assayed determine the outcomes. Genetics 181: 861-874.
    • (2009) Genetics , vol.181 , pp. 861-874
    • Georis, I.1    Feller, A.2    Tate, J.J.3    Cooper, T.G.4    Dubois, E.5
  • 66
    • 0037173615 scopus 로고    scopus 로고
    • Functional profiling of the Saccharomyces cerevisiae genome
    • Giaever, G., A. M. Chu, L. Ni, C. Connelly, L. Riles et al., 2002 Functional profiling of the Saccharomyces cerevisiae genome. Nature 418: 387-391.
    • (2002) Nature , vol.418 , pp. 387-391
    • Giaever, G.1    Chu, A.M.2    Ni, L.3    Connelly, C.4    Riles, L.5
  • 67
    • 77950665737 scopus 로고    scopus 로고
    • Alternative chromatin structures of the 35S rRNA genes in Saccharomyces cerevisiae provide a molecular basis for the selective recruitment of RNA polymerases I and II
    • Goetze, H., M. Wittner, S. Hamperl, M. Hondele, K. Merz et al., 2010 Alternative chromatin structures of the 35S rRNA genes in Saccharomyces cerevisiae provide a molecular basis for the selective recruitment of RNA polymerases I and II. Mol. Cell. Biol. 30: 2028-2045.
    • (2010) Mol. Cell. Biol. , vol.30 , pp. 2028-2045
    • Goetze, H.1    Wittner, M.2    Hamperl, S.3    Hondele, M.4    Merz, K.5
  • 68
    • 0032518996 scopus 로고    scopus 로고
    • Nuclear localization of the C2H2 zinc finger protein Msn2p is regulated by stress and protein kinase A activity
    • Gorner, W., E. Durchschlag, M. T. Martinez-Pastor, F. Estruch, G. Ammerer et al., 1998 Nuclear localization of the C2H2 zinc finger protein Msn2p is regulated by stress and protein kinase A activity. Genes Dev. 12: 586-597.
    • (1998) Genes Dev. , vol.12 , pp. 586-597
    • Gorner, W.1    Durchschlag, E.2    Martinez-Pastor, M.T.3    Estruch, F.4    Ammerer, G.5
  • 69
    • 0037080980 scopus 로고    scopus 로고
    • Acute glucose starvation activates the nuclear localization signal of a stress-specific yeast transcription factor
    • Gorner, W., E. Durchschlag, J. Wolf, E. L. Brown, G. Ammerer et al., 2002 Acute glucose starvation activates the nuclear localization signal of a stress-specific yeast transcription factor. EMBO J. 21: 135-144.
    • (2002) EMBO J. , vol.21 , pp. 135-144
    • Gorner, W.1    Durchschlag, E.2    Wolf, J.3    Brown, E.L.4    Ammerer, G.5
  • 71
    • 78951484491 scopus 로고    scopus 로고
    • System-level analysis of genes and functions affecting survival during nutrient starvation in Saccharomyces cerevisiae
    • Gresham, D., V. M. Boer, A. Caudy, N. Ziv, N. J. Brandt et al., 2011 System-level analysis of genes and functions affecting survival during nutrient starvation in Saccharomyces cerevisiae. Genetics 187: 299-317.
    • (2011) Genetics , vol.187 , pp. 299-317
    • Gresham, D.1    Boer, V.M.2    Caudy, A.3    Ziv, N.4    Brandt, N.J.5
  • 72
    • 0035173012 scopus 로고    scopus 로고
    • Nucleocytoplasmic distribution of budding yeast protein kinase A regulatory subunit Bcy1 requires Zds1 and is regulated by Yak1-dependent phosphorylation of its targeting domain
    • Griffioen, G., P. Branduardi, A. Ballarini, P. Anghileri, J. Norbeck et al., 2001 Nucleocytoplasmic distribution of budding yeast protein kinase A regulatory subunit Bcy1 requires Zds1 and is regulated by Yak1-dependent phosphorylation of its targeting domain. Mol. Cell. Biol. 21: 511-523.
    • (2001) Mol. Cell. Biol. , vol.21 , pp. 511-523
    • Griffioen, G.1    Branduardi, P.2    Ballarini, A.3    Anghileri, P.4    Norbeck, J.5
  • 73
    • 0038506040 scopus 로고    scopus 로고
    • Life on a planet of its own: Regulation of RNA polymerase I transcription in the nucleolus
    • Grummt, I., 2003 Life on a planet of its own: regulation of RNA polymerase I transcription in the nucleolus. Genes Dev. 17: 1691-1702.
    • (2003) Genes Dev. , vol.17 , pp. 1691-1702
    • Grummt, I.1
  • 74
    • 77956194140 scopus 로고    scopus 로고
    • A switch from a gradient to a threshold mode in the regulation of a transcriptional cascade promotes robust execution of meiosis in budding yeast
    • Gurevich, V., and Y. Kassir, 2010 A switch from a gradient to a threshold mode in the regulation of a transcriptional cascade promotes robust execution of meiosis in budding yeast. PLoS ONE 5: e11005.
    • (2010) PLoS ONE , vol.5
    • Gurevich, V.1    Kassir, Y.2
  • 75
    • 1242294502 scopus 로고    scopus 로고
    • Activation of the Saccharomyces cerevisiae heat shock transcription factor under glucose starvation conditions by Snf1 protein kinase
    • Hahn, J. S., and D. J. Thiele, 2004 Activation of the Saccharomyces cerevisiae heat shock transcription factor under glucose starvation conditions by Snf1 protein kinase. J. Biol. Chem. 279: 5169-5176.
    • (2004) J. Biol. Chem. , vol.279 , pp. 5169-5176
    • Hahn, J.S.1    Thiele, D.J.2
  • 76
    • 1642276329 scopus 로고    scopus 로고
    • Genetic and epigenetic regulation of the FLO gene family generates cellsurface variation in yeast
    • Halme, A., S. Bumgarner, C. Styles, and G. R. Fink, 2004 Genetic and epigenetic regulation of the FLO gene family generates cellsurface variation in yeast. Cell 116: 405-415.
    • (2004) Cell , vol.116 , pp. 405-415
    • Halme, A.1    Bumgarner, S.2    Styles, C.3    Fink, G.R.4
  • 77
    • 26244457444 scopus 로고    scopus 로고
    • Galpha subunit Gpa2 recruits kelch repeat subunits that inhibit receptor-G protein coupling during cAMP-induced dimorphic transitions in Saccharomyces cerevisiae
    • Harashima, T., and J. Heitman, 2005 Galpha subunit Gpa2 recruits kelch repeat subunits that inhibit receptor-G protein coupling during cAMP-induced dimorphic transitions in Saccharomyces cerevisiae. Mol. Biol. Cell 16: 4557-4571.
    • (2005) Mol. Biol. Cell , vol.16 , pp. 4557-4571
    • Harashima, T.1    Heitman, J.2
  • 78
    • 33745199375 scopus 로고    scopus 로고
    • The kelch proteins Gpb1 and Gpb2 inhibit Ras activity via association with the yeast RasGAP neurofibromin homologs Ira1 and Ira2
    • Harashima, T., S. Anderson, J. R. Yates III. and J. Heitman, 2006 The kelch proteins Gpb1 and Gpb2 inhibit Ras activity via association with the yeast RasGAP neurofibromin homologs Ira1 and Ira2. Mol. Cell 22: 819-830.
    • (2006) Mol. Cell , vol.22 , pp. 819-830
    • Harashima, T.1    Anderson, S.2    Yates III, J.R.3    Heitman, J.4
  • 79
    • 0031717105 scopus 로고    scopus 로고
    • The AMP-activated/ SNF1 protein kinase subfamily: Metabolic sensors of the eukaryotic cell?
    • Hardie, D. G., D. Carling, and M. Carlson, 1998 The AMP-activated/ SNF1 protein kinase subfamily: Metabolic sensors of the eukaryotic cell? Annu. Rev. Biochem. 67: 821-855.
    • (1998) Annu. Rev. Biochem. , vol.67 , pp. 821-855
    • Hardie, D.G.1    Carling, D.2    Carlson, M.3
  • 80
    • 80052385397 scopus 로고    scopus 로고
    • AMP-activated protein kinase: Also regulated by ADP? Trends Biochem
    • Hardie, D. G., D. Carling, and S. J. Gamblin, 2011 AMP-activated protein kinase: also regulated by ADP? Trends Biochem. Sci. 36: 470-477.
    • (2011) Sci. , vol.36 , pp. 470-477
    • Hardie, D.G.1    Carling, D.2    Gamblin, S.J.3
  • 82
    • 34447128162 scopus 로고    scopus 로고
    • Regulation of snf1 protein kinase in response to environmental stress
    • Hong, S. P., and M. Carlson, 2007 Regulation of snf1 protein kinase in response to environmental stress. J. Biol. Chem. 282: 16838-16845.
    • (2007) J. Biol. Chem. , vol.282 , pp. 16838-16845
    • Hong, S.P.1    Carlson, M.2
  • 83
    • 0041305909 scopus 로고    scopus 로고
    • Activation of yeast Snf1 and mammalian AMP-activated protein kinase by upstream kinases
    • Hong, S. P., F. C. Leiper, A. Woods, D. Carling, and M. Carlson, 2003 Activation of yeast Snf1 and mammalian AMP-activated protein kinase by upstream kinases. Proc. Natl. Acad. Sci. USA 100: 8839-8843.
    • (2003) Proc. Natl. Acad. Sci. USA , vol.100 , pp. 8839-8843
    • Hong, S.P.1    Leiper, F.C.2    Woods, A.3    Carling, D.4    Carlson, M.5
  • 84
    • 20444468520 scopus 로고    scopus 로고
    • Function of mammalian LKB1 and Ca2+/calmodulin-dependent protein kinase kinase alpha as Snf1-activating kinases in yeast
    • Hong, S. P., M. Momcilovic, and M. Carlson, 2005 Function of mammalian LKB1 and Ca2+/calmodulin-dependent protein kinase kinase alpha as Snf1-activating kinases in yeast. J. Biol. Chem. 280: 21804-21809.
    • (2005) J. Biol. Chem. , vol.280 , pp. 21804-21809
    • Hong, S.P.1    Momcilovic, M.2    Carlson, M.3
  • 85
    • 0037903139 scopus 로고    scopus 로고
    • Signal pathway integration in the switch from the mitotic cell cycle to meiosis in yeast
    • Honigberg, S. M., and K. Purnapatre, 2003 Signal pathway integration in the switch from the mitotic cell cycle to meiosis in yeast. J. Cell Sci. 116: 2137-2147.
    • (2003) J. Cell Sci. , vol.116 , pp. 2137-2147
    • Honigberg, S.M.1    Purnapatre, K.2
  • 86
    • 69249240179 scopus 로고    scopus 로고
    • Characterization of the rapamycin-sensitive phosphoproteome reveals that Sch9 is a central coordinator of protein synthesis
    • Huber, A., B. Bodenmiller, A. Uotila, M. Stahl, S. Wanka et al., 2009 Characterization of the rapamycin-sensitive phosphoproteome reveals that Sch9 is a central coordinator of protein synthesis. Genes Dev. 23: 1929-1943.
    • (2009) Genes Dev. , vol.23 , pp. 1929-1943
    • Huber, A.1    Bodenmiller, B.2    Uotila, A.3    Stahl, M.4    Wanka, S.5
  • 87
    • 79961029774 scopus 로고    scopus 로고
    • Sch9 regulates ribosome biogenesis via Stb3, Dot6 and Tod6 and the histone deacetylase complex RPD3L
    • Huber, A., S. L. French, H. Tekotte, S. Yerlikaya, M. Stahl et al., 2011 Sch9 regulates ribosome biogenesis via Stb3, Dot6 and Tod6 and the histone deacetylase complex RPD3L. EMBO J. 30: 3052-3064.
    • (2011) EMBO J. , vol.30 , pp. 3052-3064
    • Huber, A.1    French, S.L.2    Tekotte, H.3    Yerlikaya, S.4    Stahl, M.5
  • 88
    • 6444241134 scopus 로고    scopus 로고
    • Rpd3p relocation mediates a transcriptional response to rapamycin in yeast
    • Humphrey, E. L., A. F. Shamji, B. E. Bernstein, and S. L. Schreiber, 2004 Rpd3p relocation mediates a transcriptional response to rapamycin in yeast. Chem. Biol. 11: 295-299.
    • (2004) Chem. Biol. , vol.11 , pp. 295-299
    • Humphrey, E.L.1    Shamji, A.F.2    Bernstein, B.E.3    Schreiber, S.L.4
  • 89
  • 90
    • 0035930339 scopus 로고    scopus 로고
    • TIP41 interacts with TAP42 and negatively regulates the TOR signaling pathway
    • Jacinto, E., B. Guo, K. T. Arndt, T. Schmelzle, and M. N. Hall, 2001 TIP41 interacts with TAP42 and negatively regulates the TOR signaling pathway. Mol. Cell 8: 1017-1026.
    • (2001) Mol. Cell , vol.8 , pp. 1017-1026
    • Jacinto, E.1    Guo, B.2    Arndt, K.T.3    Schmelzle, T.4    Hall, M.N.5
  • 91
    • 45849146916 scopus 로고    scopus 로고
    • Control of meiosis by respiration
    • Jambhekar, A., and A. Amon, 2008 Control of meiosis by respiration. Curr. Biol. 18: 969-975.
    • (2008) Curr. Biol. , vol.18 , pp. 969-975
    • Jambhekar, A.1    Amon, A.2
  • 92
    • 0030858383 scopus 로고    scopus 로고
    • Two glucose sensing/ signaling pathways stimulate glucose-induced inactivation of maltose permease in Saccharomyces
    • Jiang, H., I. Medintz, and C. A. Michels, 1997 Two glucose sensing/ signaling pathways stimulate glucose-induced inactivation of maltose permease in Saccharomyces. Mol. Biol. Cell 8: 1293-1304.
    • (1997) Mol. Biol. Cell , vol.8 , pp. 1293-1304
    • Jiang, H.1    Medintz, I.2    Michels, C.A.3
  • 93
    • 0030468365 scopus 로고    scopus 로고
    • Glucose regulates protein interactions within the yeast SNF1 protein kinase complex
    • Jiang, R., and M. Carlson, 1996 Glucose regulates protein interactions within the yeast SNF1 protein kinase complex. Genes Dev. 10: 3105-3115.
    • (1996) Genes Dev. , vol.10 , pp. 3105-3115
    • Jiang, R.1    Carlson, M.2
  • 94
    • 0033577745 scopus 로고    scopus 로고
    • Tor proteins and protein phosphatase 2A reciprocally regulate Tap42 in controlling cell growth in yeast
    • Jiang, Y., and J. R. Broach, 1999 Tor proteins and protein phosphatase 2A reciprocally regulate Tap42 in controlling cell growth in yeast. EMBO J. 18: 2782-2792.
    • (1999) EMBO J. , vol.18 , pp. 2782-2792
    • Jiang, Y.1    Broach, J.R.2
  • 95
    • 0032404121 scopus 로고    scopus 로고
    • Efficient transition to growth on fermentable carbon sources in Saccharomyces cerevisiae requires signaling through the Ras pathway
    • Jiang, Y., C. Davis, and J. R. Broach, 1998 Efficient transition to growth on fermentable carbon sources in Saccharomyces cerevisiae requires signaling through the Ras pathway. EMBO J. 17: 6942-6951.
    • (1998) EMBO J. , vol.17 , pp. 6942-6951
    • Jiang, Y.1    Davis, C.2    Broach, J.R.3
  • 97
    • 14644424616 scopus 로고    scopus 로고
    • Glucose as a hormone: Receptor-mediated glucose sensing in the yeast Saccharomyces cerevisiae
    • Johnston, M., and J. H. Kim, 2005 Glucose as a hormone: receptor-mediated glucose sensing in the yeast Saccharomyces cerevisiae. Biochem. Soc. Trans. 33: 247-252.
    • (2005) Biochem. Soc. Trans. , vol.33 , pp. 247-252
    • Johnston, M.1    Kim, J.H.2
  • 98
    • 8544265296 scopus 로고    scopus 로고
    • The nucleotide sequence of Saccharomyces cerevisiae chromosome XII
    • Johnston, M., L. Hillier, L. Riles, K. Albermann, B. Andre et al., 1997 The nucleotide sequence of Saccharomyces cerevisiae chromosome XII. Nature 387: 87-90.
    • (1997) Nature , vol.387 , pp. 87-90
    • Johnston, M.1    Hillier, L.2    Riles, L.3    Albermann, K.4    Andre, B.5
  • 99
    • 0037135134 scopus 로고    scopus 로고
    • Systematic identification of pathways that couple cell growth and division in yeast
    • Jorgensen, P., J. L. Nishikawa, B. J. Breitkreutz, and M. Tyers, 2002 Systematic identification of pathways that couple cell growth and division in yeast. Science 297: 395-400.
    • (2002) Science , vol.297 , pp. 395-400
    • Jorgensen, P.1    Nishikawa, J.L.2    Breitkreutz, B.J.3    Tyers, M.4
  • 100
    • 5444256434 scopus 로고    scopus 로고
    • A dynamic transcriptional network communicates growth potential to ribosome synthesis and critical cell size
    • Jorgensen, P., I. Rupes, J. R. Sharom, L. Schneper, J. R. Broach et al., 2004 A dynamic transcriptional network communicates growth potential to ribosome synthesis and critical cell size. Genes Dev. 18: 2491-2505.
    • (2004) Genes Dev. , vol.18 , pp. 2491-2505
    • Jorgensen, P.1    Rupes, I.2    Sharom, J.R.3    Schneper, L.4    Broach, J.R.5
  • 101
    • 75749090429 scopus 로고    scopus 로고
    • Tor directly controls the Atg1 kinase complex to regulate autophagy
    • Kamada, Y., K. Yoshino, C. Kondo, T. Kawamata, N. Oshiro et al., 2010 Tor directly controls the Atg1 kinase complex to regulate autophagy. Mol. Cell. Biol. 30: 1049-1058.
    • (2010) Mol. Cell. Biol. , vol.30 , pp. 1049-1058
    • Kamada, Y.1    Yoshino, K.2    Kondo, C.3    Kawamata, T.4    Oshiro, N.5
  • 102
    • 1242300132 scopus 로고    scopus 로고
    • Regulatory network connecting two glucose signal transduction pathways in Saccharomyces cerevisiae
    • Kaniak, A., Z. Xue, D. Macool, J. H. Kim, and M. Johnston, 2004 Regulatory network connecting two glucose signal transduction pathways in Saccharomyces cerevisiae. Eukaryot. Cell 3: 221-231.
    • (2004) Eukaryot. Cell , vol.3 , pp. 221-231
    • Kaniak, A.1    Xue, Z.2    McOol, D.3    Kim, J.H.4    Johnston, M.5
  • 103
    • 77954101739 scopus 로고    scopus 로고
    • Conditions with high intracellular glucose inhibit sensing through glucose sensor Snf3 in Saccharomyces cerevisiae
    • Karhumaa, K., B. Wu, and M. C. Kielland-Brandt, 2010 Conditions with high intracellular glucose inhibit sensing through glucose sensor Snf3 in Saccharomyces cerevisiae. J. Cell. Biochem. 110: 920-925.
    • (2010) J. Cell. Biochem. , vol.110 , pp. 920-925
    • Karhumaa, K.1    Wu, B.2    Kielland-Brandt, M.C.3
  • 104
    • 33847050801 scopus 로고    scopus 로고
    • Cell survival responses to environmental stresses via the Keap1-Nrf2-ARE pathway
    • Kensler, T. W., N. Wakabayashi, and S. Biswal, 2007 Cell survival responses to environmental stresses via the Keap1-Nrf2-ARE pathway. Annu. Rev. Pharmacol. Toxicol. 47: 89-116.
    • (2007) Annu. Rev. Pharmacol. Toxicol. , vol.47 , pp. 89-116
    • Kensler, T.W.1    Wakabayashi, N.2    Biswal, S.3
  • 105
    • 0029927982 scopus 로고    scopus 로고
    • Multiprotein transcription factor UAF interacts with the upstream element of the yeast RNA polymerase I promoter and forms a stable preinitiation complex
    • Keys, D. A., B. S. Lee, J. A. Dodd, T. T. Nguyen, L. Vu et al., 1996 Multiprotein transcription factor UAF interacts with the upstream element of the yeast RNA polymerase I promoter and forms a stable preinitiation complex. Genes Dev. 10: 887-903.
    • (1996) Genes Dev. , vol.10 , pp. 887-903
    • Keys, D.A.1    Lee, B.S.2    Dodd, J.A.3    Nguyen, T.T.4    Vu, L.5
  • 106
    • 30944448623 scopus 로고    scopus 로고
    • Integration of transcriptional and posttranslational regulation in a glucose signal transduction pathway in Saccharomyces cerevisiae
    • Kim, J. H., V. Brachet, H. Moriya, and M. Johnston, 2006 Integration of transcriptional and posttranslational regulation in a glucose signal transduction pathway in Saccharomyces cerevisiae. Eukaryot. Cell 5: 167-173.
    • (2006) Eukaryot. Cell , vol.5 , pp. 167-173
    • Kim, J.H.1    Brachet, V.2    Moriya, H.3    Johnston, M.4
  • 107
    • 0842342616 scopus 로고    scopus 로고
    • A genomewide oscillation in transcription gates DNA replication and cell cycle
    • Klevecz, R. R., J. Bolen, G. Forrest, and D. B. Murray, 2004 A genomewide oscillation in transcription gates DNA replication and cell cycle. Proc. Natl. Acad. Sci. USA 101: 1200-1205.
    • (2004) Proc. Natl. Acad. Sci. USA , vol.101 , pp. 1200-1205
    • Klevecz, R.R.1    Bolen, J.2    Forrest, G.3    Murray, D.B.4
  • 109
    • 0032986914 scopus 로고    scopus 로고
    • A Saccharomyces cerevisiae G-protein coupled receptor, Gpr1, is specifically required for glucose activation of the cAMP pathway during the transition to growth on glucose
    • Kraakman, L., K. Lemaire, P. Ma, A. W. Teunissen, M. C. Donaton et al., 1999 A Saccharomyces cerevisiae G-protein coupled receptor, Gpr1, is specifically required for glucose activation of the cAMP pathway during the transition to growth on glucose. Mol. Microbiol. 32: 1002-1012.
    • (1999) Mol. Microbiol. , vol.32 , pp. 1002-1012
    • Kraakman, L.1    Lemaire, K.2    Ma, P.3    Teunissen, A.W.4    Donaton, M.C.5
  • 110
    • 33846048300 scopus 로고    scopus 로고
    • When transcriptome meets metabolome: Fast cellular responses of yeast to sudden relief of glucose limitation
    • Kresnowati, M. T., W. A. van Winden, M. J. Almering, A. ten Pierick, C. Ras et al., 2006 When transcriptome meets metabolome: fast cellular responses of yeast to sudden relief of glucose limitation. Mol. Syst. Biol. 2: 49.
    • (2006) Mol. Syst. Biol. , vol.2 , pp. 49
    • Kresnowati, M.T.1    van Winden, W.A.2    Almering, M.J.3    Ten Pierick, A.4    Ras, C.5
  • 111
    • 61649116589 scopus 로고    scopus 로고
    • Piecemeal microautophagy of the nucleus: Genetic and morphological traits
    • Krick, R., Y. Muhe, T. Prick, M. Bredschneider, S. Bremer et al., 2009 Piecemeal microautophagy of the nucleus: genetic and morphological traits. Autophagy 5: 270-272.
    • (2009) Autophagy , vol.5 , pp. 270-272
    • Krick, R.1    Muhe, Y.2    Prick, T.3    Bredschneider, M.4    Bremer, S.5
  • 112
    • 0037829786 scopus 로고    scopus 로고
    • Gpa2p, a G-protein alpha-subunit, regulates growth and pseudohyphal development in Saccharomyces cerevisiae via a cAMP-dependent mechanism
    • Kubler, E., H. U. Mosch, S. Rupp, and M. P. Lisanti, 1997 Gpa2p, a G-protein alpha-subunit, regulates growth and pseudohyphal development in Saccharomyces cerevisiae via a cAMP-dependent mechanism. J. Biol. Chem. 272: 20321-20323.
    • (1997) J. Biol. Chem. , vol.272 , pp. 20321-20323
    • Kubler, E.1    Mosch, H.U.2    Rupp, S.3    Lisanti, M.P.4
  • 113
    • 34948840834 scopus 로고    scopus 로고
    • Ensemble modeling for analysis of cell signaling dynamics
    • Kuepfer, L., M. Peter, U. Sauer, and J. Stelling, 2007 Ensemble modeling for analysis of cell signaling dynamics. Nat. Biotechnol. 25: 1001-1006.
    • (2007) Nat. Biotechnol. , vol.25 , pp. 1001-1006
    • Kuepfer, L.1    Peter, M.2    Sauer, U.3    Stelling, J.4
  • 114
    • 0002077797 scopus 로고    scopus 로고
    • Meiosis and sporulation in Saccharomyces cerevisiae
    • in, edited by J. R. Pringle, J. R. Broach, and E. W. Jones. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY
    • Kupiec, M., B. Byers, R. E. Esposito, and A. P. Mitchell, 1997 Meiosis and sporulation in Saccharomyces cerevisiae, pp. 889-1036 in The Molecular and Cellular Biology of the Yeast Saccharomyces, edited by J. R. Pringle, J. R. Broach, and E. W. Jones. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
    • (1997) The Molecular and Cellular Biology of the Yeast Saccharomyces , pp. 889-1036
    • Kupiec, M.1    Byers, B.2    Esposito, R.E.3    Mitchell, A.P.4
  • 115
    • 78049249838 scopus 로고    scopus 로고
    • A quantitative model of glucose signaling in yeast reveals an incoherent feed forward loop leading to a specific, transient pulse of transcription
    • Kuttykrishnan, S., J. Sabina, L. L. Langton, M. Johnston, and M. R. Brent, 2010 A quantitative model of glucose signaling in yeast reveals an incoherent feed forward loop leading to a specific, transient pulse of transcription. Proc. Natl. Acad. Sci. USA 107: 16743-16748.
    • (2010) Proc. Natl. Acad. Sci. USA , vol.107 , pp. 16743-16748
    • Kuttykrishnan, S.1    Sabina, J.2    Langton, L.L.3    Johnston, M.4    Brent, M.R.5
  • 116
    • 33746631755 scopus 로고    scopus 로고
    • The transcriptional activity of RNA polymerase I is a key determinant for the level of all ribosome components
    • Laferte, A., E. Favry, A. Sentenac, M. Riva, C. Carles et al., 2006 The transcriptional activity of RNA polymerase I is a key determinant for the level of all ribosome components. Genes Dev. 20: 2030-2040.
    • (2006) Genes Dev. , vol.20 , pp. 2030-2040
    • Laferte, A.1    Favry, E.2    Sentenac, A.3    Riva, M.4    Carles, C.5
  • 117
    • 0142061170 scopus 로고    scopus 로고
    • Repression of transcription by Rgt1 in the absence of glucose requires Std1 and Mth1
    • Lakshmanan, J., A. L. Mosley, and S. Ozcan, 2003 Repression of transcription by Rgt1 in the absence of glucose requires Std1 and Mth1. Curr. Genet. 44: 19-25.
    • (2003) Curr. Genet. , vol.44 , pp. 19-25
    • Lakshmanan, J.1    Mosley, A.L.2    Ozcan, S.3
  • 118
    • 0037223751 scopus 로고    scopus 로고
    • The transcription factor Rim101p governs ion tolerance and cell differentiation by direct repression of the regulatory genes NRG1 and SMP1 in Saccharomyces cerevisiae
    • Lamb, T. M., and A. P. Mitchell, 2003 The transcription factor Rim101p governs ion tolerance and cell differentiation by direct repression of the regulatory genes NRG1 and SMP1 in Saccharomyces cerevisiae. Mol. Cell. Biol. 23: 677-686.
    • (2003) Mol. Cell. Biol. , vol.23 , pp. 677-686
    • Lamb, T.M.1    Mitchell, A.P.2
  • 119
    • 0037263985 scopus 로고    scopus 로고
    • Hap4p overexpression in glucose-grown Saccharomyces cerevisiae induces cells to enter a novel metabolic state
    • Lascaris, R., H. J. Bussemaker, A. Boorsma, M. Piper, H. van der Spek et al., 2003 Hap4p overexpression in glucose-grown Saccharomyces cerevisiae induces cells to enter a novel metabolic state. Genome Biol. 4: R3.
    • (2003) Genome Biol. , vol.4
    • Lascaris, R.1    Bussemaker, H.J.2    Boorsma, A.3    Piper, M.4    van der Spek, H.5
  • 120
    • 47049116691 scopus 로고    scopus 로고
    • Increased respiration in the sch9Delta mutant is required for increasing chronological life span but not replicative life span
    • Lavoie, H., and M. Whiteway, 2008 Increased respiration in the sch9Delta mutant is required for increasing chronological life span but not replicative life span. Eukaryot. Cell 7: 1127-1135.
    • (2008) Eukaryot. Cell , vol.7 , pp. 1127-1135
    • Lavoie, H.1    Whiteway, M.2
  • 121
    • 3543023310 scopus 로고    scopus 로고
    • Evidence for nucleosome depletion at active regulatory regions genome-wide
    • Lee, C. K., Y. Shibata, B. Rao, B. D. Strahl, and J. D. Lieb, 2004 Evidence for nucleosome depletion at active regulatory regions genome-wide. Nat. Genet. 36: 900-905.
    • (2004) Nat. Genet. , vol.36 , pp. 900-905
    • Lee, C.K.1    Shibata, Y.2    Rao, B.3    Strahl, B.D.4    Lieb, J.D.5
  • 122
    • 67649827419 scopus 로고    scopus 로고
    • Regulation of RNA polymerase III transcription involves SCH9-dependent and SCH9-independent branches of the target of rapamycin (TOR) pathway
    • Lee, J., R. D. Moir, and I. M. Willis, 2009 Regulation of RNA polymerase III transcription involves SCH9-dependent and SCH9-independent branches of the target of rapamycin (TOR) pathway. J. Biol. Chem. 284: 12604-12608.
    • (2009) J. Biol. Chem. , vol.284 , pp. 12604-12608
    • Lee, J.1    Moir, R.D.2    Willis, I.M.3
  • 123
    • 54249109491 scopus 로고    scopus 로고
    • Yeast Yak1 kinase, a bridge between PKA and stress-responsive transcription factors, Hsf1 and Msn2/Msn4
    • Lee, P., B. R. Cho, H. S. Joo, and J. S. Hahn, 2008 Yeast Yak1 kinase, a bridge between PKA and stress-responsive transcription factors, Hsf1 and Msn2/Msn4. Mol. Microbiol. 70: 882-895.
    • (2008) Mol. Microbiol. , vol.70 , pp. 882-895
    • Lee, P.1    Cho, B.R.2    Joo, H.S.3    Hahn, J.S.4
  • 124
    • 78751699051 scopus 로고    scopus 로고
    • Regulation of yeast Yak1 kinase by PKA and autophosphorylation-dependent 14-3-3 binding
    • Lee, P., S. M. Paik, C. S. Shin, W. K. Huh, and J. S. Hahn, 2011 Regulation of yeast Yak1 kinase by PKA and autophosphorylation-dependent 14-3-3 binding. Mol. Microbiol. 79: 633-646.
    • (2011) Mol. Microbiol. , vol.79 , pp. 633-646
    • Lee, P.1    Paik, S.M.2    Shin, C.S.3    Huh, W.K.4    Hahn, J.S.5
  • 125
    • 0038735287 scopus 로고    scopus 로고
    • Isolation of mutations in the catalytic domain of the snf1 kinase that render its activity independent of the snf4 subunit
    • Leech, A., N. Nath, R. R. McCartney, and M. C. Schmidt, 2003 Isolation of mutations in the catalytic domain of the snf1 kinase that render its activity independent of the snf4 subunit. Eukaryot. Cell 2: 265-273.
    • (2003) Eukaryot. Cell , vol.2 , pp. 265-273
    • Leech, A.1    Nath, N.2    McCartney, R.R.3    Schmidt, M.C.4
  • 126
    • 6344280942 scopus 로고    scopus 로고
    • Glucose and sucrose act as agonist and mannose as antagonist ligands of the G protein-coupled receptor Gpr1 in the yeast Saccharomyces cerevisiae
    • Lemaire, K., S. Van de Velde, P. Van Dijck, and J. M. Thevelein, 2004 Glucose and sucrose act as agonist and mannose as antagonist ligands of the G protein-coupled receptor Gpr1 in the yeast Saccharomyces cerevisiae. Mol. Cell 16: 293-299.
    • (2004) Mol. Cell , vol.16 , pp. 293-299
    • Lemaire, K.1    Van de Velde, S.2    van Dijck, P.3    Thevelein, J.M.4
  • 127
    • 62549119989 scopus 로고    scopus 로고
    • Sfp1 interaction with TORC1 and Mrs6 reveals feedback regulation on TOR signaling
    • Lempiainen, H., A. Uotila, J. Urban, I. Dohnal, G. Ammerer et al., 2009 Sfp1 interaction with TORC1 and Mrs6 reveals feedback regulation on TOR signaling. Mol. Cell 33: 704-716.
    • (2009) Mol. Cell , vol.33 , pp. 704-716
    • Lempiainen, H.1    Uotila, A.2    Urban, J.3    Dohnal, I.4    Ammerer, G.5
  • 128
    • 19944399062 scopus 로고    scopus 로고
    • The Ccr4-Not complex independently controls both Msn2-dependent transcriptional activation-via a newly identified Glc7/Bud14 type I protein phosphatase module-and TFIID promoter distribution
    • Lenssen, E., N. James, I. Pedruzzi, F. Dubouloz, E. Cameroni et al., 2005 The Ccr4-Not complex independently controls both Msn2-dependent transcriptional activation-via a newly identified Glc7/Bud14 type I protein phosphatase module-and TFIID promoter distribution. Mol. Cell. Biol. 25: 488-498.
    • (2005) Mol. Cell. Biol. , vol.25 , pp. 488-498
    • Lenssen, E.1    James, N.2    Pedruzzi, I.3    Dubouloz, F.4    Cameroni, E.5
  • 129
    • 1842583789 scopus 로고    scopus 로고
    • Development by selfdigestion: Molecular mechanisms and biological functions of autophagy
    • Levine, B., and D. J. Klionsky, 2004 Development by selfdigestion: molecular mechanisms and biological functions of autophagy. Dev. Cell 6: 463-477.
    • (2004) Dev. Cell , vol.6 , pp. 463-477
    • Levine, B.1    Klionsky, D.J.2
  • 130
    • 33748298941 scopus 로고    scopus 로고
    • Nutrient regulates Tor1 nuclear localization and association with rDNA promoter
    • Li, H., C. K. Tsang, M. Watkins, P. G. Bertram, and X. F. Zheng, 2006 Nutrient regulates Tor1 nuclear localization and association with rDNA promoter. Nature 442: 1058-1061.
    • (2006) Nature , vol.442 , pp. 1058-1061
    • Li, H.1    Tsang, C.K.2    Watkins, M.3    Bertram, P.G.4    Zheng, X.F.5
  • 131
    • 78349264244 scopus 로고    scopus 로고
    • Stb3 plays a role in the glucose-induced transition from quiescence to growth in Saccharomyces cerevisiae
    • Liko, D., M. K. Conway, D. S. Grunwald, and W. Heideman, 2010 Stb3 plays a role in the glucose-induced transition from quiescence to growth in Saccharomyces cerevisiae. Genetics 185: 797-810.
    • (2010) Genetics , vol.185 , pp. 797-810
    • Liko, D.1    Conway, M.K.2    Grunwald, D.S.3    Heideman, W.4
  • 132
    • 73949150346 scopus 로고    scopus 로고
    • Protein kinase A and TORC1 activate genes for ribosomal biogenesis by inactivating repressors encoded by Dot6 and its homolog Tod6
    • Lippman, S. I., and J. R. Broach, 2009 Protein kinase A and TORC1 activate genes for ribosomal biogenesis by inactivating repressors encoded by Dot6 and its homolog Tod6. Proc. Natl. Acad. Sci. USA 106: 19928-19933.
    • (2009) Proc. Natl. Acad. Sci. USA , vol.106 , pp. 19928-19933
    • Lippman, S.I.1    Broach, J.R.2
  • 133
    • 74249097001 scopus 로고    scopus 로고
    • Snf1p regulates Gcn5p transcriptional activity by antagonizing Spt3p
    • Liu, Y., X. Xu, and M. H. Kuo, 2010 Snf1p regulates Gcn5p transcriptional activity by antagonizing Spt3p. Genetics 184: 91-105.
    • (2010) Genetics , vol.184 , pp. 91-105
    • Liu, Y.1    Xu, X.2    Kuo, M.H.3
  • 134
    • 0032873464 scopus 로고    scopus 로고
    • A transcriptional switch in the expression of yeast tricarboxylic acid cycle genes in response to a reduction or loss of respiratory function
    • Liu, Z., and R. A. Butow, 1999 A transcriptional switch in the expression of yeast tricarboxylic acid cycle genes in response to a reduction or loss of respiratory function. Mol. Cell. Biol. 19: 6720-6728.
    • (1999) Mol. Cell. Biol. , vol.19 , pp. 6720-6728
    • Liu, Z.1    Butow, R.A.2
  • 135
    • 33845656956 scopus 로고    scopus 로고
    • Mitochondrial retrograde signaling
    • Liu, Z., and R. A. Butow, 2006 Mitochondrial retrograde signaling. Annu. Rev. Genet. 40: 159-185.
    • (2006) Annu. Rev. Genet. , vol.40 , pp. 159-185
    • Liu, Z.1    Butow, R.A.2
  • 136
    • 84858183302 scopus 로고    scopus 로고
    • Regulation of amino acid, nucleotide, and phosphate metabolism in Saccharomyces cerevisiae
    • Ljungdahl, P. O., and B. Daignan-Fornier, 2012 Regulation of amino acid, nucleotide, and phosphate metabolism in Saccharomyces cerevisiae. Genetics 190: 885-929.
    • (2012) Genetics , vol.190 , pp. 885-929
    • Ljungdahl, P.O.1    Daignan-Fornier, B.2
  • 137
    • 0035839135 scopus 로고    scopus 로고
    • Snf1-a histone kinase that works in concert with the histone acetyltransferase Gcn5 to regulate transcription
    • Lo, W. S., L. Duggan, N. C. Emre, R. Belotserkovskya, W. S. Lane et al., 2001 Snf1-a histone kinase that works in concert with the histone acetyltransferase Gcn5 to regulate transcription. Science 293: 1142-1146.
    • (2001) Science , vol.293 , pp. 1142-1146
    • Lo, W.S.1    Duggan, L.2    Emre, N.C.3    Belotserkovskya, R.4    Lane, W.S.5
  • 138
    • 16344395502 scopus 로고    scopus 로고
    • Histone H3 phosphorylation can promote TBP recruitment through distinct promoter-specific mechanisms
    • Lo, W. S., E. R. Gamache, K. W. Henry, D. Yang, L. Pillus et al., 2005 Histone H3 phosphorylation can promote TBP recruitment through distinct promoter-specific mechanisms. EMBO J. 24: 997-1008.
    • (2005) EMBO J. , vol.24 , pp. 997-1008
    • Lo, W.S.1    Gamache, E.R.2    Henry, K.W.3    Yang, D.4    Pillus, L.5
  • 139
    • 27744588740 scopus 로고    scopus 로고
    • Cyclic AMP-independent regulation of protein kinase A substrate phosphorylation by Kelch repeat proteins
    • Lu, A., and J. P. Hirsch, 2005 Cyclic AMP-independent regulation of protein kinase A substrate phosphorylation by Kelch repeat proteins. Eukaryot. Cell 4: 1794-1800.
    • (2005) Eukaryot. Cell , vol.4 , pp. 1794-1800
    • Lu, A.1    Hirsch, J.P.2
  • 140
    • 64049092699 scopus 로고    scopus 로고
    • Slow growth induces heat-shock resistance in normal and respiratory-deficient yeast
    • Lu, C., M. J. Brauer, and D. Botstein, 2009 Slow growth induces heat-shock resistance in normal and respiratory-deficient yeast. Mol. Biol. Cell 20: 891-903.
    • (2009) Mol. Biol. Cell , vol.20 , pp. 891-903
    • Lu, C.1    Brauer, M.J.2    Botstein, D.3
  • 141
    • 80052939858 scopus 로고    scopus 로고
    • Acetylation of yeast AMPK controls intrinsic aging independently of caloric restriction
    • Lu, J. Y., Y. Y. Lin, J. C. Sheu, J. T. Wu, F. J. Lee et al., 2011 Acetylation of yeast AMPK controls intrinsic aging independently of caloric restriction. Cell 146: 969-979.
    • (2011) Cell , vol.146 , pp. 969-979
    • Lu, J.Y.1    Lin, Y.Y.2    Sheu, J.C.3    Wu, J.T.4    Lee, F.J.5
  • 142
    • 0029664530 scopus 로고    scopus 로고
    • The SAP, a new family of proteins, associate and function positively with the SIT4 phosphatase
    • Luke, M. M., F. Della Seta, C. J. Di Como, H. Sugimoto, R. Kobayashi et al., 1996 The SAP, a new family of proteins, associate and function positively with the SIT4 phosphatase. Mol. Cell. Biol. 16: 2744-2755.
    • (1996) Mol. Cell. Biol. , vol.16 , pp. 2744-2755
    • Luke, M.M.1    della Seta, F.2    Di Como, C.J.3    Sugimoto, H.4    Kobayashi, R.5
  • 143
    • 0032896365 scopus 로고    scopus 로고
    • The PDE1-encoded low-affinity phosphodiesterase in the yeast Saccharomyces cerevisiae has a specific function in controlling agonist-induced cAMP signaling
    • Ma, P., S. Wera, P. Van Dijck, and J. M. Thevelein, 1999 The PDE1-encoded low-affinity phosphodiesterase in the yeast Saccharomyces cerevisiae has a specific function in controlling agonist-induced cAMP signaling. Mol. Biol. Cell 10: 91-104.
    • (1999) Mol. Biol. Cell , vol.10 , pp. 91-104
    • Ma, P.1    Wera, S.2    van Dijck, P.3    Thevelein, J.M.4
  • 144
    • 0037094434 scopus 로고    scopus 로고
    • Nitrogen regulation in Saccharomyces cerevisiae
    • Magasanik, B., and C. A. Kaiser, 2002 Nitrogen regulation in Saccharomyces cerevisiae. Gene 290: 1-18.
    • (2002) Gene , vol.290 , pp. 1-18
    • Magasanik, B.1    Kaiser, C.A.2
  • 145
    • 79953222615 scopus 로고    scopus 로고
    • The Yak1 protein kinase lies at the center of a regulatory cascade affecting adhesive growth and stress resistance in Saccharomyces cerevisiae
    • Malcher, M., S. Schladebeck, and H. U. Mosch, 2011 The Yak1 protein kinase lies at the center of a regulatory cascade affecting adhesive growth and stress resistance in Saccharomyces cerevisiae. Genetics 187: 717-730.
    • (2011) Genetics , vol.187 , pp. 717-730
    • Malcher, M.1    Schladebeck, S.2    Mosch, H.U.3
  • 146
    • 5144229125 scopus 로고    scopus 로고
    • Sfp1 is a stress-and nutrient-sensitive regulator of ribosomal protein gene expression
    • Marion, R. M., A. Regev, E. Segal, Y. Barash, D. Koller et al., 2004 Sfp1 is a stress-and nutrient-sensitive regulator of ribosomal protein gene expression. Proc. Natl. Acad. Sci. USA 101: 14315-14322.
    • (2004) Proc. Natl. Acad. Sci. USA , vol.101 , pp. 14315-14322
    • Marion, R.M.1    Regev, A.2    Segal, E.3    Barash, Y.4    Koller, D.5
  • 147
    • 11144273952 scopus 로고    scopus 로고
    • TOR regulates ribosomal protein gene expression via PKA and the Forkhead transcription factor FHL1
    • Martin, D. E., A. Soulard, and M. N. Hall, 2004 TOR regulates ribosomal protein gene expression via PKA and the Forkhead transcription factor FHL1. Cell 119: 969-979.
    • (2004) Cell , vol.119 , pp. 969-979
    • Martin, D.E.1    Soulard, A.2    Hall, M.N.3
  • 148
    • 1542343973 scopus 로고    scopus 로고
    • MTOR-dependent activation of the transcription factor TIF-IA links rRNA synthesis to nutrient availability
    • Mayer, C., J. Zhao, X. Yuan, and I. Grummt, 2004 mTOR-dependent activation of the transcription factor TIF-IA links rRNA synthesis to nutrient availability. Genes Dev. 18: 423-434.
    • (2004) Genes Dev. , vol.18 , pp. 423-434
    • Mayer, C.1    Zhao, J.2    Yuan, X.3    Grummt, I.4
  • 149
    • 80455160062 scopus 로고    scopus 로고
    • ADP regulates SNF1, the Saccharomyces cerevisiae homolog of AMP-activated protein kinase
    • Mayer, F. V., R. Heath, E. Underwood, M. J. Sanders, D. Carmena et al., 2011 ADP regulates SNF1, the Saccharomyces cerevisiae homolog of AMP-activated protein kinase. Cell Metab. 14: 707-714.
    • (2011) Cell Metab. , vol.14 , pp. 707-714
    • Mayer, F.V.1    Heath, R.2    Underwood, E.3    Sanders, M.J.4    Carmena, D.5
  • 150
    • 0035965277 scopus 로고    scopus 로고
    • Regulation of Snf1 kinase. Activation requires phosphorylation of threonine 210 by an upstream kinase as well as a distinct step mediated by the Snf4 subunit
    • McCartney, R. R., and M. C. Schmidt, 2001 Regulation of Snf1 kinase. Activation requires phosphorylation of threonine 210 by an upstream kinase as well as a distinct step mediated by the Snf4 subunit. J. Biol. Chem. 276: 36460-36466.
    • (2001) J. Biol. Chem. , vol.276 , pp. 36460-36466
    • McCartney, R.R.1    Schmidt, M.C.2
  • 151
    • 43249097755 scopus 로고    scopus 로고
    • Actively transcribed rRNA genes in S. cerevisiae are organized in a specialized chromatin associated with the highmobility group protein Hmo1 and are largely devoid of histone molecules
    • Merz, K., M. Hondele, H. Goetze, K. Gmelch, U. Stoeckl et al., 2008 Actively transcribed rRNA genes in S. cerevisiae are organized in a specialized chromatin associated with the highmobility group protein Hmo1 and are largely devoid of histone molecules. Genes Dev. 22: 1190-1204.
    • (2008) Genes Dev. , vol.22 , pp. 1190-1204
    • Merz, K.1    Hondele, M.2    Goetze, H.3    Gmelch, K.4    Stoeckl, U.5
  • 152
    • 0027932717 scopus 로고
    • Mammalian AMP-activated protein kinase shares structural and functional homology with the catalytic domain of yeast Snf1 protein kinase
    • Mitchelhill, K. I., D. Stapleton, G. Gao, C. House, B. Michell et al., 1994 Mammalian AMP-activated protein kinase shares structural and functional homology with the catalytic domain of yeast Snf1 protein kinase. J. Biol. Chem. 269: 2361-2364.
    • (1994) J. Biol. Chem. , vol.269 , pp. 2361-2364
    • Mitchelhill, K.I.1    Stapleton, D.2    Gao, G.3    House, C.4    Michell, B.5
  • 153
    • 77952986553 scopus 로고    scopus 로고
    • Deciphering protein kinase specificity through largescale analysis of yeast phosphorylation site motifs
    • Mok, J., P. M. Kim, H. Y. Lam, S. Piccirillo, X. Zhou et al., 2010 Deciphering protein kinase specificity through largescale analysis of yeast phosphorylation site motifs. Sci. Signal. 3: ra12.
    • (2010) Sci. Signal. , vol.3
    • Mok, J.1    Kim, P.M.2    Lam, H.Y.3    Piccirillo, S.4    Zhou, X.5
  • 154
    • 33748747706 scopus 로고    scopus 로고
    • Mammalian TAK1 activates Snf1 protein kinase in yeast and phosphorylates AMP-activated protein kinase in vitro
    • Momcilovic, M., S. P. Hong, and M. Carlson, 2006 Mammalian TAK1 activates Snf1 protein kinase in yeast and phosphorylates AMP-activated protein kinase in vitro. J. Biol. Chem. 281: 25336-25343.
    • (2006) J. Biol. Chem. , vol.281 , pp. 25336-25343
    • Momcilovic, M.1    Hong, S.P.2    Carlson, M.3
  • 155
    • 50349099673 scopus 로고    scopus 로고
    • Roles of the glycogen-binding domain and Snf4 in glucose inhibition of SNF1 protein kinase
    • Momcilovic, M., S. H. Iram, Y. Liu, and M. Carlson, 2008 Roles of the glycogen-binding domain and Snf4 in glucose inhibition of SNF1 protein kinase. J. Biol. Chem. 283: 19521-19529.
    • (2008) J. Biol. Chem. , vol.283 , pp. 19521-19529
    • Momcilovic, M.1    Iram, S.H.2    Liu, Y.3    Carlson, M.4
  • 156
    • 1242274644 scopus 로고    scopus 로고
    • Glucose sensing and signaling in Saccharomyces cerevisiae through the Rgt2 glucose sensor and casein kinase I
    • Moriya, H., and M. Johnston, 2004 Glucose sensing and signaling in Saccharomyces cerevisiae through the Rgt2 glucose sensor and casein kinase I. Proc. Natl. Acad. Sci. USA 101: 1572-1577.
    • (2004) Proc. Natl. Acad. Sci. USA , vol.101 , pp. 1572-1577
    • Moriya, H.1    Johnston, M.2
  • 157
    • 0035873250 scopus 로고    scopus 로고
    • Yak1p, a DYRK family kinase, translocates to the nucleus and phosphorylates yeast Pop2p in response to a glucose signal
    • Moriya, H., Y. Shimizu-Yoshida, A. Omori, S. Iwashita, M. Katoh et al., 2001 Yak1p, a DYRK family kinase, translocates to the nucleus and phosphorylates yeast Pop2p in response to a glucose signal. Genes Dev. 15: 1217-1228.
    • (2001) Genes Dev. , vol.15 , pp. 1217-1228
    • Moriya, H.1    Shimizu-Yoshida, Y.2    Omori, A.3    Iwashita, S.4    Katoh, M.5
  • 158
    • 0033981095 scopus 로고    scopus 로고
    • RAP, RAP, open up! New wrinkles for RAP1 in yeast
    • Morse, R. H., 2000 RAP, RAP, open up! New wrinkles for RAP1 in yeast. Trends Genet. 16: 51-53.
    • (2000) Trends Genet. , vol.16 , pp. 51-53
    • Morse, R.H.1
  • 159
    • 0037855780 scopus 로고    scopus 로고
    • Glucose-mediated phosphorylation converts the transcription factor Rgt1 from a repressor to an activator
    • Mosley, A. L., J. Lakshmanan, B. K. Aryal, and S. Ozcan, 2003 Glucose-mediated phosphorylation converts the transcription factor Rgt1 from a repressor to an activator. J. Biol. Chem. 278: 10322-10327.
    • (2003) J. Biol. Chem. , vol.278 , pp. 10322-10327
    • Mosley, A.L.1    Lakshmanan, J.2    Aryal, B.K.3    Ozcan, S.4
  • 160
    • 35548960975 scopus 로고    scopus 로고
    • Dissecting timing variability in yeast meiosis
    • Nachman, I., A. Regev, and S. Ramanathan, 2007 Dissecting timing variability in yeast meiosis. Cell 131: 544-556.
    • (2007) Cell , vol.131 , pp. 544-556
    • Nachman, I.1    Regev, A.2    Ramanathan, S.3
  • 161
    • 67649875630 scopus 로고    scopus 로고
    • Widespread reorganization of metabolic enzymes into reversible assemblies upon nutrient starvation
    • Narayanaswamy, R., M. Levy, M. Tsechansky, G. M. Stovall, J. D. O'Connell et al., 2009 Widespread reorganization of metabolic enzymes into reversible assemblies upon nutrient starvation. Proc. Natl. Acad. Sci. USA 106: 10147-10152.
    • (2009) Proc. Natl. Acad. Sci. USA , vol.106 , pp. 10147-10152
    • Narayanaswamy, R.1    Levy, M.2    Tsechansky, M.3    Stovall, G.M.4    O'Connell, J.D.5
  • 162
    • 0038583957 scopus 로고    scopus 로고
    • Yeast Pak1 kinase associates with and activates Snf1
    • Nath, N., R. R. McCartney, and M. C. Schmidt, 2003 Yeast Pak1 kinase associates with and activates Snf1. Mol. Cell. Biol. 23: 3909-3917.
    • (2003) Mol. Cell. Biol. , vol.23 , pp. 3909-3917
    • Nath, N.1    McCartney, R.R.2    Schmidt, M.C.3
  • 163
    • 67651235863 scopus 로고    scopus 로고
    • A genome-wide screen for regulators of TORC1 in response to amino acid starvation reveals a conserved Npr2/3 complex
    • Neklesa, T. K., and R. W. Davis, 2009 A genome-wide screen for regulators of TORC1 in response to amino acid starvation reveals a conserved Npr2/3 complex. PLoS Genet. 5: e1000515.
    • (2009) PLoS Genet. , vol.5
    • Neklesa, T.K.1    Davis, R.W.2
  • 164
    • 0023442858 scopus 로고
    • Rigorous feedback control of cAMP levels in Saccharomyces cerevisiae
    • Nikawa, J., S. Cameron, T. Toda, K. M. Ferguson, and M. Wigler, 1987 Rigorous feedback control of cAMP levels in Saccharomyces cerevisiae. Genes Dev. 1: 931-937.
    • (1987) Genes Dev. , vol.1 , pp. 931-937
    • Nikawa, J.1    Cameron, S.2    Toda, T.3    Ferguson, K.M.4    Wigler, M.5
  • 165
    • 34548292509 scopus 로고    scopus 로고
    • Kelch repeat protein interacts with the yeast Galpha subunit Gpa2p at a site that couples receptor binding to guanine nucleotide exchange
    • Niranjan, T., X. Guo, J. Victor, A. Lu, and J. P. Hirsch, 2007 Kelch repeat protein interacts with the yeast Galpha subunit Gpa2p at a site that couples receptor binding to guanine nucleotide exchange. J. Biol. Chem. 282: 24231-24238.
    • (2007) J. Biol. Chem. , vol.282 , pp. 24231-24238
    • Niranjan, T.1    Guo, X.2    Victor, J.3    Lu, A.4    Hirsch, J.P.5
  • 166
    • 73449129423 scopus 로고    scopus 로고
    • Epigenetic and conventional regulation is distributed among activators of FLO11 allowing tuning of population-level heterogeneity in its expression
    • Octavio, L. M., K. Gedeon, and N. Maheshri, 2009 Epigenetic and conventional regulation is distributed among activators of FLO11 allowing tuning of population-level heterogeneity in its expression. PLoS Genet. 5: e1000673.
    • (2009) PLoS Genet. , vol.5
    • Octavio, L.M.1    Gedeon, K.2    Maheshri, N.3
  • 167
    • 33744512096 scopus 로고    scopus 로고
    • General repression of RNA polymerase III transcription is triggered by protein phosphatase type 2A-mediated dephosphorylation of Maf1
    • Oficjalska-Pham, D., O. Harismendy, W. J. Smagowicz, A. Gonzalez de Peredo, M. Boguta et al., 2006 General repression of RNA polymerase III transcription is triggered by protein phosphatase type 2A-mediated dephosphorylation of Maf1. Mol. Cell 22: 623-632.
    • (2006) Mol. Cell , vol.22 , pp. 623-632
    • Oficjalska-Pham, D.1    Harismendy, O.2    Smagowicz, W.J.3    de Gonzalez Peredo, A.4    Boguta, M.5
  • 168
    • 33751191872 scopus 로고    scopus 로고
    • Nitrogen availability and TOR regulate the Snf1 protein kinase in Saccharomyces cerevisiae
    • Orlova, M., E. Kanter, D. Krakovich, and S. Kuchin, 2006 Nitrogen availability and TOR regulate the Snf1 protein kinase in Saccharomyces cerevisiae. Eukaryot. Cell 5: 1831-1837.
    • (2006) Eukaryot. Cell , vol.5 , pp. 1831-1837
    • Orlova, M.1    Kanter, E.2    Krakovich, D.3    Kuchin, S.4
  • 169
    • 75649116458 scopus 로고    scopus 로고
    • Roles of the Snf1-activating kinases during nitrogen limitation and pseudohyphal differentiation in Saccharomyces cerevisiae
    • Orlova, M., H. Ozcetin, L. Barrett, and S. Kuchin, 2010 Roles of the Snf1-activating kinases during nitrogen limitation and pseudohyphal differentiation in Saccharomyces cerevisiae. Eukaryot. Cell 9: 208-214.
    • (2010) Eukaryot. Cell , vol.9 , pp. 208-214
    • Orlova, M.1    Ozcetin, H.2    Barrett, L.3    Kuchin, S.4
  • 170
    • 0036224499 scopus 로고    scopus 로고
    • Sensing, signalling and integrating physical processes during Saccharomyces cerevisiae invasive and filamentous growth
    • Palecek, S. P., A. S. Parikh, and S. J. Kron, 2002 Sensing, signalling and integrating physical processes during Saccharomyces cerevisiae invasive and filamentous growth. Microbiology 148: 893-907.
    • (2002) Microbiology , vol.148 , pp. 893-907
    • Palecek, S.P.1    Parikh, A.S.2    Kron, S.J.3
  • 171
    • 33645530751 scopus 로고    scopus 로고
    • Tpk3 and Snf1 protein kinases regulate Rgt1 association with Saccharomyces cerevisiae HXK2 promoter
    • Palomino, A., P. Herrero, and F. Moreno, 2006 Tpk3 and Snf1 protein kinases regulate Rgt1 association with Saccharomyces cerevisiae HXK2 promoter. Nucleic Acids Res. 34: 1427-1438.
    • (2006) Nucleic Acids Res. , vol.34 , pp. 1427-1438
    • Palomino, A.1    Herrero, P.2    Moreno, F.3
  • 172
    • 33847417585 scopus 로고    scopus 로고
    • P bodies and the control of mRNA translation and degradation
    • Parker, R., and U. Sheth, 2007 P bodies and the control of mRNA translation and degradation. Mol. Cell 25: 635-646.
    • (2007) Mol. Cell , vol.25 , pp. 635-646
    • Parker, R.1    Sheth, U.2
  • 173
    • 78649598716 scopus 로고    scopus 로고
    • 14-3-3 (Bmh) proteins inhibit transcription activation by Adr1 through direct binding to its regulatory domain
    • Parua, P. K., S. Ratnakumar, K. A. Braun, K. M. Dombek, E. Arms et al., 2010 14-3-3 (Bmh) proteins inhibit transcription activation by Adr1 through direct binding to its regulatory domain. Mol. Cell. Biol. 30: 5273-5283.
    • (2010) Mol. Cell. Biol. , vol.30 , pp. 5273-5283
    • Parua, P.K.1    Ratnakumar, S.2    Braun, K.A.3    Dombek, K.M.4    Arms, E.5
  • 174
    • 0348047591 scopus 로고    scopus 로고
    • TOR and PKA signaling pathways converge on the protein kinase Rim15 to control entry into G0
    • Pedruzzi, I., F. Dubouloz, E. Cameroni, V. Wanke, J. Roosen et al., 2003 TOR and PKA signaling pathways converge on the protein kinase Rim15 to control entry into G0. Mol. Cell 12: 1607-1613.
    • (2003) Mol. Cell , vol.12 , pp. 1607-1613
    • Pedruzzi, I.1    Dubouloz, F.2    Cameroni, E.3    Wanke, V.4    Roosen, J.5
  • 175
    • 33748368267 scopus 로고    scopus 로고
    • Kelch-repeat proteins interacting with the Galpha protein Gpa2 bypass adenylate cyclase for direct regulation of protein kinase A in yeast
    • Peeters, T., W. Louwet, R. Gelade, D. Nauwelaers, J. M. Thevelein et al., 2006 Kelch-repeat proteins interacting with the Galpha protein Gpa2 bypass adenylate cyclase for direct regulation of protein kinase A in yeast. Proc. Natl. Acad. Sci. USA 103: 13034-13039.
    • (2006) Proc. Natl. Acad. Sci. USA , vol.103 , pp. 13034-13039
    • Peeters, T.1    Louwet, W.2    Gelade, R.3    Nauwelaers, D.4    Thevelein, J.M.5
  • 176
    • 36248971651 scopus 로고    scopus 로고
    • Directly from Galpha to protein kinase A: The kelch repeat protein bypass of adenylate cyclase
    • Peeters, T., M. Versele, and J. M. Thevelein, 2007 Directly from Galpha to protein kinase A: the kelch repeat protein bypass of adenylate cyclase. Trends Biochem. Sci. 32: 547-554.
    • (2007) Trends Biochem. Sci. , vol.32 , pp. 547-554
    • Peeters, T.1    Versele, M.2    Thevelein, J.M.3
  • 177
    • 78649735310 scopus 로고    scopus 로고
    • Functional domains of yeast hexokinase 2
    • Pelaez, R., P. Herrero, and F. Moreno, 2010 Functional domains of yeast hexokinase 2. Biochem. J. 432: 181-190.
    • (2010) Biochem. J. , vol.432 , pp. 181-190
    • Pelaez, R.1    Herrero, P.2    Moreno, F.3
  • 178
    • 0035917865 scopus 로고    scopus 로고
    • Cooperation and competition in the evolution of ATP-producing pathways
    • Pfeiffer, T., S. Schuster, and S. Bonhoeffer, 2001 Cooperation and competition in the evolution of ATP-producing pathways. Science 292: 504-507.
    • (2001) Science , vol.292 , pp. 504-507
    • Pfeiffer, T.1    Schuster, S.2    Bonhoeffer, S.3
  • 179
    • 77956530749 scopus 로고    scopus 로고
    • TOR-dependent reduction in the expression level of Rrn3p lowers the activity of the yeast RNA Pol I machinery, but does not account for the strong inhibition of rRNA production
    • Philippi, A., R. Steinbauer, A. Reiter, S. Fath, I. Leger-Silvestre et al., 2010 TOR-dependent reduction in the expression level of Rrn3p lowers the activity of the yeast RNA Pol I machinery, but does not account for the strong inhibition of rRNA production. Nucleic Acids Res. 38: 5315-5326.
    • (2010) Nucleic Acids Res. , vol.38 , pp. 5315-5326
    • Philippi, A.1    Steinbauer, R.2    Reiter, A.3    Fath, S.4    Leger-Silvestre, I.5
  • 180
    • 77957921563 scopus 로고    scopus 로고
    • Regulation of sporulation in the yeast Saccharomyces cerevisiae
    • Piekarska, I., J. Rytka, and B. Rempola, 2010 Regulation of sporulation in the yeast Saccharomyces cerevisiae. Acta Biochim. Pol. 57: 241-250.
    • (2010) Acta Biochim. Pol. , vol.57 , pp. 241-250
    • Piekarska, I.1    Rytka, J.2    Rempola, B.3
  • 181
    • 2942566528 scopus 로고    scopus 로고
    • Glucose and nitrogen regulate the switch from histone deacetylation to acetylation for expression of early meiosis-specific genes in budding yeast
    • Pnueli, L., I. Edry, M. Cohen, and Y. Kassir, 2004 Glucose and nitrogen regulate the switch from histone deacetylation to acetylation for expression of early meiosis-specific genes in budding yeast. Mol. Cell. Biol. 24: 5197-5208.
    • (2004) Mol. Cell. Biol. , vol.24 , pp. 5197-5208
    • Pnueli, L.1    Edry, I.2    Cohen, M.3    Kassir, Y.4
  • 182
    • 0037163019 scopus 로고    scopus 로고
    • In vivo and in vitro phosphorylation of two isoforms of yeast pyruvate kinase by protein kinase A
    • Portela, P., S. Howell, S. Moreno, and S. Rossi, 2002 In vivo and in vitro phosphorylation of two isoforms of yeast pyruvate kinase by protein kinase A. J. Biol. Chem. 277: 30477-30487.
    • (2002) J. Biol. Chem. , vol.277 , pp. 30477-30487
    • Portela, P.1    Howell, S.2    Moreno, S.3    Rossi, S.4
  • 183
    • 33646781928 scopus 로고    scopus 로고
    • Characterization of yeast pyruvate kinase 1 as a protein kinase A substrate, and specificity of the phosphorylation site sequence in the whole protein
    • Portela, P., S. Moreno, and S. Rossi, 2006 Characterization of yeast pyruvate kinase 1 as a protein kinase A substrate, and specificity of the phosphorylation site sequence in the whole protein. Biochem. J. 396: 117-126.
    • (2006) Biochem. J. , vol.396 , pp. 117-126
    • Portela, P.1    Moreno, S.2    Rossi, S.3
  • 184
    • 30944458446 scopus 로고    scopus 로고
    • Extension of chronological life span in yeast by decreased TOR pathway signaling
    • Powers, R. W. III. M. Kaeberlein, S. D. Caldwell, B. K. Kennedy, and S. Fields, 2006 Extension of chronological life span in yeast by decreased TOR pathway signaling. Genes Dev. 20: 174-184.
    • (2006) Genes Dev. , vol.20 , pp. 174-184
    • Powers III, R.W.1    Kaeberlein, M.2    Caldwell, S.D.3    Kennedy, B.K.4    Fields, S.5
  • 185
    • 33947328342 scopus 로고    scopus 로고
    • Mutual interdependence of MSI1 (CAC3) and YAK1 in Saccharomyces cerevisiae
    • Pratt, Z. L., B. J. Drehman, M. E. Miller, and S. D. Johnston, 2007 Mutual interdependence of MSI1 (CAC3) and YAK1 in Saccharomyces cerevisiae. J. Mol. Biol. 368: 30-43.
    • (2007) J. Mol. Biol. , vol.368 , pp. 30-43
    • Pratt, Z.L.1    Drehman, B.J.2    Miller, M.E.3    Johnston, S.D.4
  • 186
    • 1542316919 scopus 로고    scopus 로고
    • Control of yeast filamentous-form growth by modules in an integrated molecular network
    • Prinz, S., I. Avila-Campillo, C. Aldridge, A. Srinivasan, K. Dimitrov et al., 2004 Control of yeast filamentous-form growth by modules in an integrated molecular network. Genome Res. 14: 380-390.
    • (2004) Genome Res. , vol.14 , pp. 380-390
    • Prinz, S.1    Avila-Campillo, I.2    Aldridge, C.3    Srinivasan, A.4    Dimitrov, K.5
  • 187
    • 28444460297 scopus 로고    scopus 로고
    • Global analysis of protein phosphorylation in yeast
    • Ptacek, J., G. Devgan, G. Michaud, H. Zhu, X. Zhu et al., 2005 Global analysis of protein phosphorylation in yeast. Nature 438: 679-684.
    • (2005) Nature , vol.438 , pp. 679-684
    • Ptacek, J.1    Devgan, G.2    Michaud, G.3    Zhu, H.4    Zhu, X.5
  • 188
    • 11144292769 scopus 로고    scopus 로고
    • Glucose inhibits meiotic DNA replication through SCFGrr1pdependent destruction of Ime2p kinase
    • Purnapatre, K., M. Gray, S. Piccirillo, and S. M. Honigberg, 2005 Glucose inhibits meiotic DNA replication through SCFGrr1pdependent destruction of Ime2p kinase. Mol. Cell. Biol. 25: 440-450.
    • (2005) Mol. Cell. Biol. , vol.25 , pp. 440-450
    • Purnapatre, K.1    Gray, M.2    Piccirillo, S.3    Honigberg, S.M.4
  • 189
    • 80053006472 scopus 로고    scopus 로고
    • The cAMP-dependent protein kinase signaling pathway is a key regulator of P body foci formation
    • Ramachandran, V., K. H. Shah, and P. K. Herman, 2011 The cAMP-dependent protein kinase signaling pathway is a key regulator of P body foci formation. Mol. Cell 43: 973-981.
    • (2011) Mol. Cell , vol.43 , pp. 973-981
    • Ramachandran, V.1    Shah, K.H.2    Herman, P.K.3
  • 190
    • 77951245389 scopus 로고    scopus 로고
    • Snf1 dependence of peroxisomal gene expression is mediated by Adr1
    • Ratnakumar, S., and E. T. Young, 2010 Snf1 dependence of peroxisomal gene expression is mediated by Adr1. J. Biol. Chem. 285: 10703-10714.
    • (2010) J. Biol. Chem. , vol.285 , pp. 10703-10714
    • Ratnakumar, S.1    Young, E.T.2
  • 191
    • 70349310032 scopus 로고    scopus 로고
    • Snf1 controls the activity of adr1 through dephosphorylation of Ser230
    • Ratnakumar, S., N. Kacherovsky, E. Arms, and E. T. Young, 2009 Snf1 controls the activity of adr1 through dephosphorylation of Ser230. Genetics 182: 735-745.
    • (2009) Genetics , vol.182 , pp. 735-745
    • Ratnakumar, S.1    Kacherovsky, N.2    Arms, E.3    Young, E.T.4
  • 192
    • 0034515772 scopus 로고    scopus 로고
    • Coordinate regulation of yeast ribosomal protein genes is associated with targeted recruitment of Esa1 histone acetylase
    • Reid, J. L., V. R. Iyer, P. O. Brown, and K. Struhl, 2000 Coordinate regulation of yeast ribosomal protein genes is associated with targeted recruitment of Esa1 histone acetylase. Mol. Cell 6: 1297-1307.
    • (2000) Mol. Cell , vol.6 , pp. 1297-1307
    • Reid, J.L.1    Iyer, V.R.2    Brown, P.O.3    Struhl, K.4
  • 193
    • 33744515555 scopus 로고    scopus 로고
    • Dephosphorylation and genome-wide association of Maf1 with Pol III-transcribed genes during repression
    • Roberts, D. N., B. Wilson, J. T. Huff, A. J. Stewart, and B. R. Cairns, 2006 Dephosphorylation and genome-wide association of Maf1 with Pol III-transcribed genes during repression. Mol. Cell 22: 633-644.
    • (2006) Mol. Cell , vol.22 , pp. 633-644
    • Roberts, D.N.1    Wilson, B.2    Huff, J.T.3    Stewart, A.J.4    Cairns, B.R.5
  • 195
    • 0032506120 scopus 로고    scopus 로고
    • The three yeast A kinases have specific signaling functions in pseudohyphal growth
    • Robertson, L. S., and G. R. Fink, 1998 The three yeast A kinases have specific signaling functions in pseudohyphal growth. Proc. Natl. Acad. Sci. USA 95: 13783-13787.
    • (1998) Proc. Natl. Acad. Sci. USA , vol.95 , pp. 13783-13787
    • Robertson, L.S.1    Fink, G.R.2
  • 196
    • 0037223438 scopus 로고    scopus 로고
    • The tor pathway regulates gene expression by linking nutrient sensing to histone acetylation
    • Rohde, J. R., and M. E. Cardenas, 2003 The tor pathway regulates gene expression by linking nutrient sensing to histone acetylation. Mol. Cell. Biol. 23: 629-635.
    • (2003) Mol. Cell. Biol. , vol.23 , pp. 629-635
    • Rohde, J.R.1    Cardenas, M.E.2
  • 197
    • 1542605245 scopus 로고    scopus 로고
    • Transcriptional activators Cat8 and Sip4 discriminate between sequence variants of the carbon source-responsive promoter element in the yeast Saccharomyces cerevisiae
    • Roth, S., J. Kumme, and H. J. Schuller, 2004 Transcriptional activators Cat8 and Sip4 discriminate between sequence variants of the carbon source-responsive promoter element in the yeast Saccharomyces cerevisiae. Curr. Genet. 45: 121-128.
    • (2004) Curr. Genet. , vol.45 , pp. 121-128
    • Roth, S.1    Kumme, J.2    Schuller, H.J.3
  • 198
    • 38049174646 scopus 로고    scopus 로고
    • Access denied: Snf1 activation loop phosphorylation is controlled by availability of the phosphorylated threonine 210 to the PP1 phosphatase
    • Rubenstein, E. M., R. R. McCartney, C. Zhang, K. M. Shokat, M. K. Shirra et al., 2008 Access denied: Snf1 activation loop phosphorylation is controlled by availability of the phosphorylated threonine 210 to the PP1 phosphatase. J. Biol. Chem. 283: 222-230.
    • (2008) J. Biol. Chem. , vol.283 , pp. 222-230
    • Rubenstein, E.M.1    McCartney, R.R.2    Zhang, C.3    Shokat, K.M.4    Shirra, M.K.5
  • 199
    • 3543014938 scopus 로고    scopus 로고
    • The in vivo activity of Ime1, the key transcriptional activator of meiosis-specific genes in Saccharomyces cerevisiae, is inhibited by the cyclic AMP/protein kinase A signal pathway through the glycogen synthase kinase 3-beta homolog Rim11
    • Rubin-Bejerano, I., S. Sagee, O. Friedman, L. Pnueli, and Y. Kassir, 2004 The in vivo activity of Ime1, the key transcriptional activator of meiosis-specific genes in Saccharomyces cerevisiae, is inhibited by the cyclic AMP/protein kinase A signal pathway through the glycogen synthase kinase 3-beta homolog Rim11. Mol. Cell. Biol. 24: 6967-6979.
    • (2004) Mol. Cell. Biol. , vol.24 , pp. 6967-6979
    • Rubin-Bejerano, I.1    Sagee, S.2    Friedman, O.3    Pnueli, L.4    Kassir, Y.5
  • 200
    • 14844282303 scopus 로고    scopus 로고
    • Central role of Ifh1p-Fhl1p interaction in the synthesis of yeast ribosomal proteins
    • Rudra, D., Y. Zhao, and J. R. Warner, 2005 Central role of Ifh1p-Fhl1p interaction in the synthesis of yeast ribosomal proteins. EMBO J. 24: 533-542.
    • (2005) EMBO J. , vol.24 , pp. 533-542
    • Rudra, D.1    Zhao, Y.2    Warner, J.R.3
  • 201
    • 70350367853 scopus 로고    scopus 로고
    • Asymmetric signal transduction through paralogs that comprise a genetic switch for sugar sensing in Saccharomyces cerevisiae
    • Sabina, J., and M. Johnston, 2009 Asymmetric signal transduction through paralogs that comprise a genetic switch for sugar sensing in Saccharomyces cerevisiae. J. Biol. Chem. 284: 29635-29643.
    • (2009) J. Biol. Chem. , vol.284 , pp. 29635-29643
    • Sabina, J.1    Johnston, M.2
  • 202
    • 33750522651 scopus 로고    scopus 로고
    • Actin bodies in yeast quiescent cells: An immediately available actin reserve?
    • Sagot, I., B. Pinson, B. Salin, and B. Daignan-Fornier, 2006 Actin bodies in yeast quiescent cells: an immediately available actin reserve? Mol. Biol. Cell 17: 4645-4655.
    • (2006) Mol. Biol. Cell , vol.17 , pp. 4645-4655
    • Sagot, I.1    Pinson, B.2    Salin, B.3    Daignan-Fornier, B.4
  • 203
    • 4344685444 scopus 로고    scopus 로고
    • Nutritional homeostasis in batch and steady-state culture of yeast
    • Saldanha, A. J., M. J. Brauer, and D. Botstein, 2004 Nutritional homeostasis in batch and steady-state culture of yeast. Mol. Biol. Cell 15: 4089-4104.
    • (2004) Mol. Biol. Cell , vol.15 , pp. 4089-4104
    • Saldanha, A.J.1    Brauer, M.J.2    Botstein, D.3
  • 204
    • 77951768486 scopus 로고    scopus 로고
    • Ragulator-Rag complex targets mTORC1 to the lysosomal surface and is necessary for its activation by amino acids
    • Sancak, Y., L. Bar-Peled, R. Zoncu, A. L. Markhard, S. Nada et al., 2010 Ragulator-Rag complex targets mTORC1 to the lysosomal surface and is necessary for its activation by amino acids. Cell 141: 290-303.
    • (2010) Cell , vol.141 , pp. 290-303
    • Sancak, Y.1    Bar-Peled, L.2    Zoncu, R.3    Markhard, A.L.4    Nada, S.5
  • 205
    • 0037119973 scopus 로고    scopus 로고
    • RPD3 is required for the inactivation of yeast ribosomal DNA genes in stationary phase
    • Sandmeier, J. J., S. French, Y. Osheim, W. L. Cheung, C. M. Gallo et al., 2002 RPD3 is required for the inactivation of yeast ribosomal DNA genes in stationary phase. EMBO J. 21: 4959-4968.
    • (2002) EMBO J. , vol.21 , pp. 4959-4968
    • Sandmeier, J.J.1    French, S.2    Osheim, Y.3    Cheung, W.L.4    Gallo, C.M.5
  • 206
    • 33645130011 scopus 로고    scopus 로고
    • Glucose signaling in Saccharomyces cerevisiae
    • Santangelo, G. M., 2006 Glucose signaling in Saccharomyces cerevisiae. Microbiol. Mol. Biol. Rev. 70: 253-282.
    • (2006) Microbiol. Mol. Biol. Rev. , vol.70 , pp. 253-282
    • Santangelo, G.M.1
  • 207
    • 6344237317 scopus 로고    scopus 로고
    • PP2A phosphatase activity is required for stress and Tor kinase regulation of yeast stress response factor Msn2p
    • Santhanam, A., A. Hartley, K. Duvel, J. R. Broach, and S. Garrett, 2004 PP2A phosphatase activity is required for stress and Tor kinase regulation of yeast stress response factor Msn2p. Eukaryot. Cell 3: 1261-1271.
    • (2004) Eukaryot. Cell , vol.3 , pp. 1261-1271
    • Santhanam, A.1    Hartley, A.2    Duvel, K.3    Broach, J.R.4    Garrett, S.5
  • 208
    • 0037328926 scopus 로고    scopus 로고
    • Snf1 protein kinase: A key player in the response to cellular stress in yeast
    • Sanz, P., 2003 Snf1 protein kinase: a key player in the response to cellular stress in yeast. Biochem. Soc. Trans. 31: 178-181.
    • (2003) Biochem. Soc. Trans. , vol.31 , pp. 178-181
    • Sanz, P.1
  • 210
    • 11144244771 scopus 로고    scopus 로고
    • Growth-regulated recruitment of the essential yeast ribosomal protein gene activator Ifh1
    • Schawalder, S. B., M. Kabani, I. Howald, U. Choudhury, M. Werner et al., 2004 Growth-regulated recruitment of the essential yeast ribosomal protein gene activator Ifh1. Nature 432: 1058-1061.
    • (2004) Nature , vol.432 , pp. 1058-1061
    • Schawalder, S.B.1    Kabani, M.2    Howald, I.3    Choudhury, U.4    Werner, M.5
  • 211
    • 33745892068 scopus 로고    scopus 로고
    • Identification of direct and indirect targets of the Gln3 and Gat1 activators by transcriptional profiling in response to nitrogen availability in the short and long term
    • Scherens, B., A. Feller, F. Vierendeels, F. Messenguy, and E. Dubois, 2006 Identification of direct and indirect targets of the Gln3 and Gat1 activators by transcriptional profiling in response to nitrogen availability in the short and long term. FEMS Yeast Res. 6: 777-791.
    • (2006) FEMS Yeast Res. , vol.6 , pp. 777-791
    • Scherens, B.1    Feller, A.2    Vierendeels, F.3    Messenguy, F.4    Dubois, E.5
  • 212
    • 0034665041 scopus 로고    scopus 로고
    • Beta-subunits of Snf1 kinase are required for kinase function and substrate definition
    • Schmidt, M. C., and R. R. McCartney, 2000 beta-subunits of Snf1 kinase are required for kinase function and substrate definition. EMBO J. 19: 4936-4943.
    • (2000) EMBO J. , vol.19 , pp. 4936-4943
    • Schmidt, M.C.1    McCartney, R.R.2
  • 213
    • 0033000330 scopus 로고    scopus 로고
    • Std1 and Mth1 proteins interact with the glucose sensors to control glucose-regulated gene expression in Saccharomyces cerevisiae
    • Schmidt, M. C., R. R. McCartney, X. Zhang, T. S. Tillman, H. Solimeo et al., 1999 Std1 and Mth1 proteins interact with the glucose sensors to control glucose-regulated gene expression in Saccharomyces cerevisiae. Mol. Cell. Biol. 19: 4561-4571.
    • (1999) Mol. Cell. Biol. , vol.19 , pp. 4561-4571
    • Schmidt, M.C.1    McCartney, R.R.2    Zhang, X.3    Tillman, T.S.4    Solimeo, H.5
  • 214
    • 0037774738 scopus 로고    scopus 로고
    • Transcriptional control of nonfermentative metabolism in the yeast Saccharomyces cerevisiae
    • Schuller, H. J., 2003 Transcriptional control of nonfermentative metabolism in the yeast Saccharomyces cerevisiae. Curr. Genet. 43: 139-160.
    • (2003) Curr. Genet. , vol.43 , pp. 139-160
    • Schuller, H.J.1
  • 215
    • 0034649569 scopus 로고    scopus 로고
    • Partitioning the transcriptional program induced by rapamycin among the effectors of the Tor proteins
    • Shamji, A. F., F. G. Kuruvilla, and S. L. Schreiber, 2000 Partitioning the transcriptional program induced by rapamycin among the effectors of the Tor proteins. Curr. Biol. 10: 1574-1581.
    • (2000) Curr. Biol. , vol.10 , pp. 1574-1581
    • Shamji, A.F.1    Kuruvilla, F.G.2    Schreiber, S.L.3
  • 216
    • 58149092197 scopus 로고    scopus 로고
    • A chemical genomics study identifies Snf1 as a repressor of GCN4 translation
    • Shirra, M. K., R. R. McCartney, C. Zhang, K. M. Shokat, M. C. Schmidt et al., 2008 A chemical genomics study identifies Snf1 as a repressor of GCN4 translation. J. Biol. Chem. 283: 35889-35898.
    • (2008) J. Biol. Chem. , vol.283 , pp. 35889-35898
    • Shirra, M.K.1    McCartney, R.R.2    Zhang, C.3    Shokat, K.M.4    Schmidt, M.C.5
  • 217
    • 77951081705 scopus 로고    scopus 로고
    • Metabolic cycling in single yeast cells from unsynchronized steady-state populations limited on glucose or phosphate
    • Silverman, S. J., A. A. Petti, N. Slavov, L. Parsons, R. Briehof et al., 2010 Metabolic cycling in single yeast cells from unsynchronized steady-state populations limited on glucose or phosphate. Proc. Natl. Acad. Sci. USA 107: 6946-6951.
    • (2010) Proc. Natl. Acad. Sci. USA , vol.107 , pp. 6946-6951
    • Silverman, S.J.1    Petti, A.A.2    Slavov, N.3    Parsons, L.4    Briehof, R.5
  • 218
    • 69249240177 scopus 로고    scopus 로고
    • A Rab escort protein integrates the secretion system with TOR signaling and ribosome biogenesis
    • Singh, J., and M. Tyers, 2009 A Rab escort protein integrates the secretion system with TOR signaling and ribosome biogenesis. Genes Dev. 23: 1944-1958.
    • (2009) Genes Dev. , vol.23 , pp. 1944-1958
    • Singh, J.1    Tyers, M.2
  • 219
    • 79959199873 scopus 로고    scopus 로고
    • Coupling among growth rate response, metabolic cycle, and cell division cycle in yeast
    • Slavov, N., and D. Botstein, 2011 Coupling among growth rate response, metabolic cycle, and cell division cycle in yeast. Mol. Biol. Cell 22: 1997-2009.
    • (2011) Mol. Biol. Cell , vol.22 , pp. 1997-2009
    • Slavov, N.1    Botstein, D.2
  • 220
    • 73249152807 scopus 로고    scopus 로고
    • Life in the midst of scarcity: Adaptations to nutrient availability in Saccharomyces cerevisiae
    • Smets, B., R. Ghillebert, P. De Snijder, M. Binda, E. Swinnen et al., 2010 Life in the midst of scarcity: adaptations to nutrient availability in Saccharomyces cerevisiae. Curr. Genet. 56: 1-32.
    • (2010) Curr. Genet. , vol.56 , pp. 1-32
    • Smets, B.1    Ghillebert, R.2    de Snijder, P.3    Binda, M.4    Swinnen, E.5
  • 221
    • 0032127462 scopus 로고    scopus 로고
    • Yeast PKA represses Msn2p/Msn4p-dependent gene expression to regulate growth, stress response and glycogen accumulation
    • Smith, A., M. P. Ward, and S. Garrett, 1998 Yeast PKA represses Msn2p/Msn4p-dependent gene expression to regulate growth, stress response and glycogen accumulation. EMBO J. 17: 3556-3564.
    • (1998) EMBO J. , vol.17 , pp. 3556-3564
    • Smith, A.1    Ward, M.P.2    Garrett, S.3
  • 222
    • 4744373127 scopus 로고    scopus 로고
    • Regulation and recognition of SCFGrr1 targets in the glucose and amino acid signaling pathways
    • Spielewoy, N., K. Flick, T. I. Kalashnikova, J. R. Walker, and C. Wittenberg, 2004 Regulation and recognition of SCFGrr1 targets in the glucose and amino acid signaling pathways. Mol. Cell. Biol. 24: 8994-9005.
    • (2004) Mol. Cell. Biol. , vol.24 , pp. 8994-9005
    • Spielewoy, N.1    Flick, K.2    Kalashnikova, T.I.3    Walker, J.R.4    Wittenberg, C.5
  • 223
    • 0041700137 scopus 로고    scopus 로고
    • Elm1p is one of three upstream kinases for the Saccharomyces cerevisiae SNF1 complex
    • Sutherland, C. M., S. A. Hawley, R. R. McCartney, A. Leech, M. J. Stark et al., 2003 Elm1p is one of three upstream kinases for the Saccharomyces cerevisiae SNF1 complex. Curr. Biol. 13: 1299-1305.
    • (2003) Curr. Biol. , vol.13 , pp. 1299-1305
    • Sutherland, C.M.1    Hawley, S.A.2    McCartney, R.R.3    Leech, A.4    Stark, M.J.5
  • 224
    • 33750051551 scopus 로고    scopus 로고
    • Rim15 and the crossroads of nutrient signalling pathways in Saccharomyces cerevisiae
    • Swinnen, E., V. Wanke, J. Roosen, B. Smets, F. Dubouloz et al., 2006 Rim15 and the crossroads of nutrient signalling pathways in Saccharomyces cerevisiae. Cell Div. 1: 3.
    • (2006) Cell Div. , vol.1 , pp. 3
    • Swinnen, E.1    Wanke, V.2    Roosen, J.3    Smets, B.4    Dubouloz, F.5
  • 225
    • 14844338858 scopus 로고    scopus 로고
    • Combined global localization analysis and transcriptome data identify genes that are directly coregulated by Adr1 and Cat8
    • Tachibana, C., J. Y. Yoo, J. B. Tagne, N. Kacherovsky, T. I. Lee et al., 2005 Combined global localization analysis and transcriptome data identify genes that are directly coregulated by Adr1 and Cat8. Mol. Cell. Biol. 25: 2138-2146.
    • (2005) Mol. Cell. Biol. , vol.25 , pp. 2138-2146
    • Tachibana, C.1    Yoo, J.Y.2    Tagne, J.B.3    Kacherovsky, N.4    Lee, T.I.5
  • 226
    • 45549085296 scopus 로고    scopus 로고
    • Predictive behavior within microbial genetic networks
    • Tagkopoulos, I., Y. C. Liu, and S. Tavazoie, 2008 Predictive behavior within microbial genetic networks. Science 320: 1313-1317.
    • (2008) Science , vol.320 , pp. 1313-1317
    • Tagkopoulos, I.1    Liu, Y.C.2    Tavazoie, S.3
  • 227
    • 0141480258 scopus 로고    scopus 로고
    • Tor1/2 regulation of retrograde gene expression in Saccharomyces cerevisiae derives indirectly as a consequence of alterations in ammonia metabolism
    • Tate, J. J., and T. G. Cooper, 2003 Tor1/2 regulation of retrograde gene expression in Saccharomyces cerevisiae derives indirectly as a consequence of alterations in ammonia metabolism. J. Biol. Chem. 278: 36924-36933.
    • (2003) J. Biol. Chem. , vol.278 , pp. 36924-36933
    • Tate, J.J.1    Cooper, T.G.2
  • 228
    • 59049104862 scopus 로고    scopus 로고
    • Rapamycin-induced Gln3 dephosphorylation is insufficient for nuclear localization: Sit4 and PP2A phosphatases are regulated and function differently
    • Tate, J. J., I. Georis, A. Feller, E. Dubois, and T. G. Cooper, 2009 Rapamycin-induced Gln3 dephosphorylation is insufficient for nuclear localization: Sit4 and PP2A phosphatases are regulated and function differently. J. Biol. Chem. 284: 2522-2534.
    • (2009) J. Biol. Chem. , vol.284 , pp. 2522-2534
    • Tate, J.J.1    Georis, I.2    Feller, A.3    Dubois, E.4    Cooper, T.G.5
  • 229
    • 77952934628 scopus 로고    scopus 로고
    • Distinct phosphatase requirements and GATA factor responses to nitrogen catabolite repression and rapamycin treatment in Saccharomyces cerevisiae
    • Tate, J. J., I. Georis, E. Dubois, and T. G. Cooper, 2010 Distinct phosphatase requirements and GATA factor responses to nitrogen catabolite repression and rapamycin treatment in Saccharomyces cerevisiae. J. Biol. Chem. 285: 17880-17895.
    • (2010) J. Biol. Chem. , vol.285 , pp. 17880-17895
    • Tate, J.J.1    Georis, I.2    Dubois, E.3    Cooper, T.G.4
  • 231
    • 34047161436 scopus 로고    scopus 로고
    • Crystal structures of the adenylate sensor from fission yeast AMP-activated protein kinase
    • Townley, R., and L. Shapiro, 2007 Crystal structures of the adenylate sensor from fission yeast AMP-activated protein kinase. Science 315: 1726-1729.
    • (2007) Science , vol.315 , pp. 1726-1729
    • Townley, R.1    Shapiro, L.2
  • 232
    • 46749088609 scopus 로고    scopus 로고
    • Derepression of RNA polymerase III transcription by phosphorylation and nuclear export of its negative regulator, Maf1
    • Towpik, J., D. Graczyk, A. Gajda, O. Lefebvre, and M. Boguta, 2008 Derepression of RNA polymerase III transcription by phosphorylation and nuclear export of its negative regulator, Maf1. J. Biol. Chem. 283: 17168-17174.
    • (2008) J. Biol. Chem. , vol.283 , pp. 17168-17174
    • Towpik, J.1    Graczyk, D.2    Gajda, A.3    Lefebvre, O.4    Boguta, M.5
  • 233
    • 27944487902 scopus 로고    scopus 로고
    • Logic of the yeast metabolic cycle: Temporal compartmentalization of cellular processes
    • Tu, B. P., A. Kudlicki, M. Rowicka, and S. L. McKnight, 2005 Logic of the yeast metabolic cycle: temporal compartmentalization of cellular processes. Science 310: 1152-1158.
    • (2005) Science , vol.310 , pp. 1152-1158
    • Tu, B.P.1    Kudlicki, A.2    Rowicka, M.3    McKnight, S.L.4
  • 234
    • 0028894928 scopus 로고
    • REG1 binds to protein phosphatase type 1 and regulates glucose repression in Saccharomyces cerevisiae
    • Tu, J., and M. Carlson, 1995 REG1 binds to protein phosphatase type 1 and regulates glucose repression in Saccharomyces cerevisiae. EMBO J. 14: 5939-5946.
    • (1995) EMBO J. , vol.14 , pp. 5939-5946
    • Tu, J.1    Carlson, M.2
  • 235
    • 74549132460 scopus 로고    scopus 로고
    • Transcriptional regulation of nonfermentable carbon utilization in budding yeast
    • Turcotte, B., X. B. Liang, F. Robert, and N. Soontorngun, 2010 Transcriptional regulation of nonfermentable carbon utilization in budding yeast. FEMS Yeast Res. 10: 2-13.
    • (2010) FEMS Yeast Res. , vol.10 , pp. 2-13
    • Turcotte, B.1    Liang, X.B.2    Robert, F.3    Soontorngun, N.4
  • 236
    • 34249813098 scopus 로고    scopus 로고
    • Sch9 is a major target of TORC1 in Saccharomyces cerevisiae
    • Urban, J., A. Soulard, A. Huber, S. Lippman, D. Mukhopadhyay et al., 2007 Sch9 is a major target of TORC1 in Saccharomyces cerevisiae. Mol. Cell 26: 663-674.
    • (2007) Mol. Cell , vol.26 , pp. 663-674
    • Urban, J.1    Soulard, A.2    Huber, A.3    Lippman, S.4    Mukhopadhyay, D.5
  • 237
    • 73149091660 scopus 로고    scopus 로고
    • Reconstruction of the yeast Snf1 kinase regulatory network reveals its role as a global energy regulator
    • Usaite, R., M. C. Jewett, A. P. Oliveira, J. R. Yates 3rd. L. Olsson et al., 2009 Reconstruction of the yeast Snf1 kinase regulatory network reveals its role as a global energy regulator. Mol. Syst. Biol. 5: 319.
    • (2009) Mol. Syst. Biol. , vol.5 , pp. 319
    • Usaite, R.1    Jewett, M.C.2    Oliveira, A.P.3    Yates III, J.R.4    Olsson, L.5
  • 238
    • 84934440405 scopus 로고    scopus 로고
    • Microautophagy in the yeast Saccharomyces cerevisiae
    • Uttenweiler, A., and A. Mayer, 2008 Microautophagy in the yeast Saccharomyces cerevisiae. Methods Mol. Biol. 445: 245-259.
    • (2008) Methods Mol. Biol. , vol.445 , pp. 245-259
    • Uttenweiler, A.1    Mayer, A.2
  • 239
    • 66249108601 scopus 로고    scopus 로고
    • Understanding the Warburg effect: The metabolic requirements of cell proliferation
    • Vander Heiden, M. G., L. C. Cantley, and C. B. Thompson, 2009 Understanding the Warburg effect: the metabolic requirements of cell proliferation. Science 324: 1029-1033. van Oevelen, C. J., H. A.
    • (2009) Science , vol.324 , pp. 1029-1033
    • Vander Heiden, M.G.1    Cantley, L.C.2    Thompson, C.B.3
  • 240
    • 33645212856 scopus 로고    scopus 로고
    • Snf1p-dependent Spt-Ada-Gcn5-acetyltransferase (SAGA) recruitment and chromatin remodeling activities on the HXT2 and HXT4 promoters
    • van Teeffelen, F. J. van Werven, and H. T. Timmers, 2006 Snf1p-dependent Spt-Ada-Gcn5-acetyltransferase (SAGA) recruitment and chromatin remodeling activities on the HXT2 and HXT4 promoters. J. Biol. Chem. 281: 4523-4531.
    • (2006) J. Biol. Chem. , vol.281 , pp. 4523-4531
    • van Teeffelen, F.1    van Werven, J.2    Timmers, H.T.3
  • 241
    • 0033485516 scopus 로고    scopus 로고
    • Gal83 mediates the interaction of the Snf1 kinase complex with the transcription activator Sip4
    • Vincent, O., and M. Carlson, 1999 Gal83 mediates the interaction of the Snf1 kinase complex with the transcription activator Sip4. EMBO J. 18: 6672-6681.
    • (1999) EMBO J. , vol.18 , pp. 6672-6681
    • Vincent, O.1    Carlson, M.2
  • 242
    • 0035338114 scopus 로고    scopus 로고
    • Subcellular localization of the Snf1 kinase is regulated by specific beta subunits and a novel glucose signaling mechanism
    • Vincent, O., R. Townley, S. Kuchin, andM. Carlson, 2001 Subcellular localization of the Snf1 kinase is regulated by specific beta subunits and a novel glucose signaling mechanism. Genes Dev. 15: 1104-1114.
    • (2001) Genes Dev. , vol.15 , pp. 1104-1114
    • Vincent, O.1    Townley, R.2    Kuchin, S.3    Carlson, M.4
  • 243
    • 69749111488 scopus 로고    scopus 로고
    • The Hsp70 homolog Ssb is essential for glucose sensing via the SNF1 kinase network
    • von Plehwe, U., U. Berndt, C. Conz, M. Chiabudini, E. Fitzke et al., 2009 The Hsp70 homolog Ssb is essential for glucose sensing via the SNF1 kinase network. Genes Dev. 23: 2102-2115.
    • (2009) Genes Dev. , vol.23 , pp. 2102-2115
    • von Plehwe, U.1    Berndt, U.2    Conz, C.3    Chiabudini, M.4    Fitzke, E.5
  • 244
    • 11144231369 scopus 로고    scopus 로고
    • The transcription factor Ifh1 is a key regulator of yeast ribosomal protein genes
    • Wade, J. T., D. B. Hall, and K. Struhl, 2004 The transcription factor Ifh1 is a key regulator of yeast ribosomal protein genes. Nature 432: 1054-1058.
    • (2004) Nature , vol.432 , pp. 1054-1058
    • Wade, J.T.1    Hall, D.B.2    Struhl, K.3
  • 245
    • 33645818545 scopus 로고    scopus 로고
    • Plasma membrane localization of Ras requires class C Vps proteins and functional mitochondria in Saccharomyces cerevisiae
    • Wang, G., and R. J. Deschenes, 2006 Plasma membrane localization of Ras requires class C Vps proteins and functional mitochondria in Saccharomyces cerevisiae. Mol. Cell. Biol. 26: 3243-3255.
    • (2006) Mol. Cell. Biol. , vol.26 , pp. 3243-3255
    • Wang, G.1    Deschenes, R.J.2
  • 246
    • 19344365135 scopus 로고    scopus 로고
    • Ras and Gpa2 mediate one branch of a redundant glucose signaling pathway in yeast
    • Wang, Y., M. Pierce, L. Schneper, C. G. Guldal, X. Zhang et al., 2004 Ras and Gpa2 mediate one branch of a redundant glucose signaling pathway in yeast. PLoS Biol. 2: E128.
    • (2004) PLoS Biol. , vol.2
    • Wang, Y.1    Pierce, M.2    Schneper, L.3    Guldal, C.G.4    Zhang, X.5
  • 247
    • 70149089302 scopus 로고    scopus 로고
    • Deterministic mathematical models of the cAMP pathway in Saccharomyces cerevisiae
    • Williamson, T., J. M. Schwartz, D. B. Kell, and L. Stateva, 2009 Deterministic mathematical models of the cAMP pathway in Saccharomyces cerevisiae. BMC Syst. Biol. 3: 70.
    • (2009) BMC Syst. Biol. , vol.3 , pp. 70
    • Williamson, T.1    Schwartz, J.M.2    Kell, D.B.3    Stateva, L.4
  • 248
    • 33846659385 scopus 로고    scopus 로고
    • Integration of nutritional and stress signaling pathways by Maf1
    • Willis, I. M., and R. D. Moir, 2007 Integration of nutritional and stress signaling pathways by Maf1. Trends Biochem. Sci. 32: 51-53.
    • (2007) Trends Biochem. Sci. , vol.32 , pp. 51-53
    • Willis, I.M.1    Moir, R.D.2
  • 249
    • 0030293885 scopus 로고    scopus 로고
    • Glucose repression/ derepression in budding yeast: SNF1 protein kinase is activated by phosphorylation under derepressing conditions, and this correlates with a high AMP:ATP ratio
    • Wilson, W. A., S. A. Hawley, and D. G. Hardie, 1996 Glucose repression/ derepression in budding yeast: SNF1 protein kinase is activated by phosphorylation under derepressing conditions, and this correlates with a high AMP:ATP ratio. Curr. Biol. 6: 1426-1434.
    • (1996) Curr. Biol. , vol.6 , pp. 1426-1434
    • Wilson, W.A.1    Hawley, S.A.2    Hardie, D.G.3
  • 250
    • 79955802907 scopus 로고    scopus 로고
    • Establishment and maintenance of alternative chromatin states at a multicopy gene locus
    • Wittner, M., S. Hamperl, U. Stockl, W. Seufert, H. Tschochner et al., 2011 Establishment and maintenance of alternative chromatin states at a multicopy gene locus. Cell 145: 543-554.
    • (2011) Cell , vol.145 , pp. 543-554
    • Wittner, M.1    Hamperl, S.2    Stockl, U.3    Seufert, W.4    Tschochner, H.5
  • 251
    • 0028070457 scopus 로고
    • Yeast SNF1 is functionally related to mammalian AMPactivated protein kinase and regulates acetyl-CoA carboxylase in vivo
    • Woods, A., M. R. Munday, J. Scott, X. Yang, M. Carlson et al., 1994 Yeast SNF1 is functionally related to mammalian AMPactivated protein kinase and regulates acetyl-CoA carboxylase in vivo. J. Biol. Chem. 269: 19509-19515.
    • (1994) J. Biol. Chem. , vol.269 , pp. 19509-19515
    • Woods, A.1    Munday, M.R.2    Scott, J.3    Yang, X.4    Carlson, M.5
  • 252
    • 33646397570 scopus 로고    scopus 로고
    • Competitive intra-and extracellular nutrient sensing by the transporter homologue Ssy1p
    • Wu, B., K. Ottow, P. Poulsen, R. F. Gaber, E. Albers et al., 2006 Competitive intra-and extracellular nutrient sensing by the transporter homologue Ssy1p. J. Cell Biol. 173: 327-331.
    • (2006) J. Cell Biol. , vol.173 , pp. 327-331
    • Wu, B.1    Ottow, K.2    Poulsen, P.3    Gaber, R.F.4    Albers, E.5
  • 253
    • 72949105986 scopus 로고    scopus 로고
    • Transcriptional control of the quorum sensing response in yeast
    • Wuster, A., and M. M. Babu, 2010 Transcriptional control of the quorum sensing response in yeast. Mol. Biosyst. 6: 134-141.
    • (2010) Mol. Biosyst. , vol.6 , pp. 134-141
    • Wuster, A.1    Babu, M.M.2
  • 254
    • 0032055105 scopus 로고    scopus 로고
    • GPR1 encodes a putative G protein-coupled receptor that associates with the Gpa2p Galpha subunit and functions in a Ras-independent pathway
    • Xue, Y., M. Batlle, and J. P. Hirsch, 1998 GPR1 encodes a putative G protein-coupled receptor that associates with the Gpa2p Galpha subunit and functions in a Ras-independent pathway. EMBO J. 17: 1996-2007.
    • (1998) EMBO J. , vol.17 , pp. 1996-2007
    • Xue, Y.1    Batlle, M.2    Hirsch, J.P.3
  • 255
    • 33747626107 scopus 로고    scopus 로고
    • Rapamycin activates Tap42-associated phosphatases by abrogating their association with Tor complex 1
    • Yan, G., X. Shen, and Y. Jiang, 2006 Rapamycin activates Tap42-associated phosphatases by abrogating their association with Tor complex 1. EMBO J. 25: 3546-3555.
    • (2006) EMBO J. , vol.25 , pp. 3546-3555
    • Yan, G.1    Shen, X.2    Jiang, Y.3
  • 256
    • 84862776556 scopus 로고    scopus 로고
    • The TOR complex 1 is a direct target of Rho1 GTPase
    • Yan, G., Y. Lai, and Y. Jiang, 2012 The TOR complex 1 is a direct target of Rho1 GTPase. Mol. Cell 45: 1-11.
    • (2012) Mol. Cell , vol.45 , pp. 1-11
    • Yan, G.1    Lai, Y.2    Jiang, Y.3
  • 257
    • 74949090299 scopus 로고    scopus 로고
    • An overview of the molecular mechanism of autophagy
    • Yang, Z., and D. J. Klionsky, 2009 An overview of the molecular mechanism of autophagy. Curr. Top. Microbiol. Immunol. 335: 1-32.
    • (2009) Curr. Top. Microbiol. Immunol. , vol.335 , pp. 1-32
    • Yang, Z.1    Klionsky, D.J.2
  • 258
    • 34948828483 scopus 로고    scopus 로고
    • Protein kinase A and Sch9 cooperatively regulate induction of autophagy in Saccharomyces cerevisiae
    • Yorimitsu, T., S. Zaman, J. R. Broach, and D. J. Klionsky, 2007 Protein kinase A and Sch9 cooperatively regulate induction of autophagy in Saccharomyces cerevisiae. Mol. Biol. Cell 18: 4180-4189.
    • (2007) Mol. Biol. Cell , vol.18 , pp. 4180-4189
    • Yorimitsu, T.1    Zaman, S.2    Broach, J.R.3    Klionsky, D.J.4
  • 259
    • 0038506725 scopus 로고    scopus 로고
    • Multiple pathways are co-regulated by the protein kinase Snf1 and the transcription factors Adr1 and Cat8
    • Young, E. T., K. M. Dombek, C. Tachibana, and T. Ideker, 2003 Multiple pathways are co-regulated by the protein kinase Snf1 and the transcription factors Adr1 and Cat8. J. Biol. Chem. 278: 26146-26158.
    • (2003) J. Biol. Chem. , vol.278 , pp. 26146-26158
    • Young, E.T.1    Dombek, K.M.2    Tachibana, C.3    Ideker, T.4
  • 261
    • 60749127330 scopus 로고    scopus 로고
    • Glucose regulates transcription in yeast through a network of signaling pathways
    • Zaman, S., S. I. Lippman, L. Schneper, N. Slonim, and J. R. Broach, 2009 Glucose regulates transcription in yeast through a network of signaling pathways. Mol. Syst. Biol. 5: 245.
    • (2009) Mol. Syst. Biol. , vol.5 , pp. 245
    • Zaman, S.1    Lippman, S.I.2    Schneper, L.3    Slonim, N.4    Broach, J.R.5
  • 262
    • 34548324648 scopus 로고    scopus 로고
    • The RACK1 ortholog Asc1 functions as a G-protein beta subunit coupled to glucose responsiveness in yeast
    • Zeller, C. E., S. C. Parnell, and H. G. Dohlman, 2007 The RACK1 ortholog Asc1 functions as a G-protein beta subunit coupled to glucose responsiveness in yeast. J. Biol. Chem. 282: 25168-25176.
    • (2007) J. Biol. Chem. , vol.282 , pp. 25168-25176
    • Zeller, C.E.1    Parnell, S.C.2    Dohlman, H.G.3
  • 263
    • 34548840827 scopus 로고    scopus 로고
    • Conditions of protection by hypothermia and effects on apoptotic pathways in a rat model of permanent middle cerebral artery occlusion
    • Zhao, H., J. Q. Wang, T. Shimohata, G. Sun, M. A. Yenari et al., 2007 Conditions of protection by hypothermia and effects on apoptotic pathways in a rat model of permanent middle cerebral artery occlusion. J. Neurosurg. 107: 636-641.
    • (2007) J. Neurosurg. , vol.107 , pp. 636-641
    • Zhao, H.1    Wang, J.Q.2    Shimohata, T.3    Sun, G.4    Yenari, M.A.5
  • 264
    • 33745433124 scopus 로고    scopus 로고
    • Fine-structure analysis of ribosomal protein gene transcription
    • Zhao, Y., K. B. McIntosh, D. Rudra, S. Schawalder, D. Shore et al., 2006 Fine-structure analysis of ribosomal protein gene transcription. Mol. Cell. Biol. 26: 4853-4862.
    • (2006) Mol. Cell. Biol. , vol.26 , pp. 4853-4862
    • Zhao, Y.1    McIntosh, K.B.2    Rudra, D.3    Schawalder, S.4    Shore, D.5
  • 265
    • 63849315606 scopus 로고    scopus 로고
    • High-resolution DNA-binding specificity analysis of yeast transcription factors
    • Zhu, C., K. J. Byers, R. P. McCord, Z. Shi, M. F. Berger et al., 2009 High-resolution DNA-binding specificity analysis of yeast transcription factors. Genome Res. 19: 556-566.
    • (2009) Genome Res. , vol.19 , pp. 556-566
    • Zhu, C.1    Byers, K.J.2    McCord, R.P.3    Shi, Z.4    Berger, M.F.5


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