-
2
-
-
84902096048
-
Development and applications of CRISPR-Cas9 for genome engineering
-
Hsu, P. D., Lander, E. S. & Zhang, F. Development and applications of CRISPR-Cas9 for genome engineering. Cell 157, 1262-1278 (2014).
-
(2014)
Cell
, vol.157
, pp. 1262-1278
-
-
Hsu, P.D.1
Lander, E.S.2
Zhang, F.3
-
3
-
-
85025128200
-
Beyond native Cas9: Manipulating genomic information and function
-
Mitsunobu, H., Teramoto, J., Nishida, K. & Kondo, A. Beyond native Cas9: manipulating genomic information and function. Trends Biotechnol. 35, 983-996 (2017).
-
(2017)
Trends Biotechnol.
, vol.35
, pp. 983-996
-
-
Mitsunobu, H.1
Teramoto, J.2
Nishida, K.3
Kondo, A.4
-
4
-
-
84971006562
-
Programmable editing of a target base in genomic DNA without double-stranded DNA cleavage
-
Komor, A. C., Kim, Y. B., Packer, M. S., Zuris, J. A. & Liu, D. R. Programmable editing of a target base in genomic DNA without double-stranded DNA cleavage. Nature 533, 420-424 (2016).
-
(2016)
Nature
, vol.533
, pp. 420-424
-
-
Komor, A.C.1
Kim, Y.B.2
Packer, M.S.3
Zuris, J.A.4
Liu, D.R.5
-
5
-
-
85034861903
-
Programmable base editing of A-T to G-C in genomic DNA without DNA cleavage
-
Gaudelli, N. M. et al. Programmable base editing of A-T to G-C in genomic DNA without DNA cleavage. Nature 551, 464-471 (2017).
-
(2017)
Nature
, vol.551
, pp. 464-471
-
-
Gaudelli, N.M.1
-
6
-
-
85006705751
-
CRISPR-based technologies for the manipulation of eukaryotic genomes
-
Komor, A. C., Badran, A. H. & Liu, D. R. CRISPR-based technologies for the manipulation of eukaryotic genomes. Cell 168, 20-36 (2017).
-
(2017)
Cell
, vol.168
, pp. 20-36
-
-
Komor, A.C.1
Badran, A.H.2
Liu, D.R.3
-
7
-
-
84865070369
-
A programmable dual-RNA-guided DNA endonuclease in adaptive bacterial immunity
-
Jinek, M. et al. A programmable dual-RNA-guided DNA endonuclease in adaptive bacterial immunity. Science 337, 816-821 (2012).
-
(2012)
Science
, vol.337
, pp. 816-821
-
-
Jinek, M.1
-
8
-
-
84907257107
-
Saturation editing of genomic regions by multiplex homology-directed repair
-
Findlay, G. M., Boyle, E. A., Hause, R. J., Klein, J. C. & Shendure, J. Saturation editing of genomic regions by multiplex homology-directed repair. Nature 513, 120-123 (2014).
-
(2014)
Nature
, vol.513
, pp. 120-123
-
-
Findlay, G.M.1
Boyle, E.A.2
Hause, R.J.3
Klein, J.C.4
Shendure, J.5
-
9
-
-
84885157177
-
Optimization of scarless human stem cell genome editing
-
Yang, L. et al. Optimization of scarless human stem cell genome editing. Nucleic Acids Res. 41, 9049-9061 (2013).
-
(2013)
Nucleic Acids Res.
, vol.41
, pp. 9049-9061
-
-
Yang, L.1
-
10
-
-
84927514894
-
In vivo genome editing using Staphylococcus aureus Cas9
-
Ran, F. A. et al. In vivo genome editing using Staphylococcus aureus Cas9. Nature 520, 186-191 (2015).
-
(2015)
Nature
, vol.520
, pp. 186-191
-
-
Ran, F.A.1
-
11
-
-
84975678715
-
Cpf1 is a single RNA-guided endonuclease of a class 2 CRISPR-Cas system
-
Zetsche, B. et al. Cpf1 is a single RNA-guided endonuclease of a class 2 CRISPR-Cas system. Cell 163, 759-771 (2015).
-
(2015)
Cell
, vol.163
, pp. 759-771
-
-
Zetsche, B.1
-
12
-
-
85013297989
-
In vivo genome editing with a small Cas9 orthologue derived from Campylobacter jejuni
-
Kim, E. et al. In vivo genome editing with a small Cas9 orthologue derived from Campylobacter jejuni. Nat. Commun. 8, 14500 (2017).
-
(2017)
Nat. Commun.
, vol.8
, pp. 14500
-
-
Kim, E.1
-
13
-
-
84960467897
-
Streptococcus thermophilus CRISPR-Cas9 systems enable specific editing of the human genome
-
Müller, M. et al. Streptococcus thermophilus CRISPR-Cas9 systems enable specific editing of the human genome. Mol. Ther. 24, 636-644 (2016).
-
(2016)
Mol. Ther.
, vol.24
, pp. 636-644
-
-
Müller, M.1
-
14
-
-
84960449403
-
The Neisseria meningitidis CRISPR-Cas9 system enables specific genome editing in mammalian cells
-
Lee, C. M., Cradick, T. J. & Bao, G. The Neisseria meningitidis CRISPR-Cas9 system enables specific genome editing in mammalian cells. Mol. Ther. 24, 645-654 (2016).
-
(2016)
Mol. Ther.
, vol.24
, pp. 645-654
-
-
Lee, C.M.1
Cradick, T.J.2
Bao, G.3
-
15
-
-
84949791988
-
Broadening the targeting range of Staphylococcus aureus CRISPR-Cas9 by modifying PAM recognition
-
Kleinstiver, B. P. et al. Broadening the targeting range of Staphylococcus aureus CRISPR-Cas9 by modifying PAM recognition. Nat. Biotechnol. 33, 1293-1298 (2015).
-
(2015)
Nat. Biotechnol.
, vol.33
, pp. 1293-1298
-
-
Kleinstiver, B.P.1
-
16
-
-
84937908208
-
Engineered CRISPR-Cas9 nucleases with altered PAM specificities
-
Kleinstiver, B. P. et al. Engineered CRISPR-Cas9 nucleases with altered PAM specificities. Nature 523, 481-485 (2015).
-
(2015)
Nature
, vol.523
, pp. 481-485
-
-
Kleinstiver, B.P.1
-
17
-
-
84943777049
-
Development of potent in vivo mutagenesis plasmids with broad mutational spectra
-
Badran, A. H. & Liu, D. R. Development of potent in vivo mutagenesis plasmids with broad mutational spectra. Nat. Commun. 6, 8425 (2015).
-
(2015)
Nat. Commun.
, vol.6
, pp. 8425
-
-
Badran, A.H.1
Liu, D.R.2
-
18
-
-
79955534060
-
A system for the continuous directed evolution of biomolecules
-
Esvelt, K. M., Carlson, J. C. & Liu, D. R. A system for the continuous directed evolution of biomolecules. Nature 472, 499-503 (2011).
-
(2011)
Nature
, vol.472
, pp. 499-503
-
-
Esvelt, K.M.1
Carlson, J.C.2
Liu, D.R.3
-
19
-
-
84969786561
-
Continuous evolution of Bacillus thuringiensis toxins overcomes insect resistance
-
Badran, A. H. et al. Continuous evolution of Bacillus thuringiensis toxins overcomes insect resistance. Nature 533, 58-63 (2016).
-
(2016)
Nature
, vol.533
, pp. 58-63
-
-
Badran, A.H.1
-
20
-
-
84959102577
-
Continuous directed evolution of DNA-binding proteins to improve TALEN specificity
-
Hubbard, B. P. et al. Continuous directed evolution of DNA-binding proteins to improve TALEN specificity. Nat. Methods 12, 939-942 (2015).
-
(2015)
Nat. Methods
, vol.12
, pp. 939-942
-
-
Hubbard, B.P.1
-
21
-
-
85034865436
-
Continuous directed evolution of aminoacyl-tRNA synthetases
-
Bryson, D. I. et al. Continuous directed evolution of aminoacyl-tRNA synthetases. Nat. Chem. Biol. 13, 1253-1260 (2017).
-
(2017)
Nat. Chem. Biol.
, vol.13
, pp. 1253-1260
-
-
Bryson, D.I.1
-
22
-
-
85031807193
-
Phage-assisted continuous evolution of proteases with altered substrate specificity
-
Packer, M. S., Rees, H. A. & Liu, D. R. Phage-assisted continuous evolution of proteases with altered substrate specificity. Nat. Commun. 8, 956 (2017).
-
(2017)
Nat. Commun.
, vol.8
, pp. 956
-
-
Packer, M.S.1
Rees, H.A.2
Liu, D.R.3
-
23
-
-
34250661506
-
Identifying DNA sequences recognized by a transcription factor using a bacterial one-hybrid system
-
Meng, X. & Wolfe, S. A. Identifying DNA sequences recognized by a transcription factor using a bacterial one-hybrid system. Nat. Protocols 1, 30-45 (2006).
-
(2006)
Nat. Protocols
, vol.1
, pp. 30-45
-
-
Meng, X.1
Wolfe, S.A.2
-
24
-
-
0030907304
-
Activation of prokaryotic transcription through arbitrary protein-protein contacts
-
Dove, S. L., Joung, J. K. & Hochschild, A. Activation of prokaryotic transcription through arbitrary protein-protein contacts. Nature 386, 627-630 (1997).
-
(1997)
Nature
, vol.386
, pp. 627-630
-
-
Dove, S.L.1
Joung, J.K.2
Hochschild, A.3
-
25
-
-
84908508061
-
Structural basis of PAMdependent target DNA recognition by the Cas9 endonuclease
-
Anders, C., Niewoehner, O., Duerst, A. & Jinek, M. Structural basis of PAMdependent target DNA recognition by the Cas9 endonuclease. Nature 513, 569-573 (2014).
-
(2014)
Nature
, vol.513
, pp. 569-573
-
-
Anders, C.1
Niewoehner, O.2
Duerst, A.3
Jinek, M.4
-
26
-
-
85031099583
-
Enhanced proofreading governs CRISPR-Cas9 targeting accuracy
-
Chen, J. S. et al. Enhanced proofreading governs CRISPR-Cas9 targeting accuracy. Nature 550, 407-410 (2017).
-
(2017)
Nature
, vol.550
, pp. 407-410
-
-
Chen, J.S.1
-
27
-
-
84946215320
-
Conformational control of DNA target cleavage by CRISPR-Cas9
-
Sternberg, S. H., LaFrance, B., Kaplan, M. & Doudna, J. A. Conformational control of DNA target cleavage by CRISPR-Cas9. Nature 527, 110-113 (2015).
-
(2015)
Nature
, vol.527
, pp. 110-113
-
-
Sternberg, S.H.1
LaFrance, B.2
Kaplan, M.3
Doudna, J.A.4
-
28
-
-
85022143145
-
Engineered Cpf1 variants with altered PAM specificities
-
Gao, L. et al. Engineered Cpf1 variants with altered PAM specificities. Nat. Biotechnol. 35, 789-792 (2017).
-
(2017)
Nat. Biotechnol.
, vol.35
, pp. 789-792
-
-
Gao, L.1
-
29
-
-
84923266604
-
GUIDE-seq enables genome-wide profiling of off-target cleavage by CRISPR-Cas nucleases
-
Tsai, S. Q. et al. GUIDE-seq enables genome-wide profiling of off-target cleavage by CRISPR-Cas nucleases. Nat. Biotechnol. 33, 187-197 (2015).
-
(2015)
Nat. Biotechnol.
, vol.33
, pp. 187-197
-
-
Tsai, S.Q.1
-
30
-
-
85034565473
-
Rescue of high-specificity Cas9 variants using sgRNAs with matched 5' nucleotides
-
Kim, S. et al. Rescue of high-specificity Cas9 variants using sgRNAs with matched 5' nucleotides. Genome Biology 18, 218 (2017).
-
(2017)
Genome Biology
, vol.18
, pp. 218
-
-
Kim, S.1
-
31
-
-
84926521955
-
Highly efficient Cas9-mediated transcriptional programming
-
Chavez, A. et al. Highly efficient Cas9-mediated transcriptional programming. Nat. Methods 12, 326-328 (2015).
-
(2015)
Nat. Methods
, vol.12
, pp. 326-328
-
-
Chavez, A.1
-
32
-
-
84921540377
-
Rational design of highly active sgRNAs for CRISPR-Cas9-mediated gene inactivation
-
Doench, J. G. et al. Rational design of highly active sgRNAs for CRISPR-Cas9-mediated gene inactivation. Nat. Biotechnol. 32, 1262-1267 (2014).
-
(2014)
Nat. Biotechnol.
, vol.32
, pp. 1262-1267
-
-
Doench, J.G.1
-
33
-
-
84903200702
-
Comparison of non-canonical PAMs for CRISPR/Cas9-mediated DNA cleavage in human cells
-
Zhang, Y. et al. Comparison of non-canonical PAMs for CRISPR/Cas9-mediated DNA cleavage in human cells. Sci. Rep. 4, 5405 (2014).
-
(2014)
Sci. Rep.
, vol.4
, pp. 5405
-
-
Zhang, Y.1
-
34
-
-
85017397628
-
Increasing the genome-targeting scope and precision of base editing with engineered Cas9-cytidine deaminase fusions
-
Kim, Y. B. et al. Increasing the genome-targeting scope and precision of base editing with engineered Cas9-cytidine deaminase fusions. Nat. Biotechnol. 35, 371-376 (2017).
-
(2017)
Nat. Biotechnol.
, vol.35
, pp. 371-376
-
-
Kim, Y.B.1
-
35
-
-
85030701188
-
Improved base excision repair inhibition and bacteriophage Mu Gam protein yields C:G-to-T:A base editors with higher efficiency and product purity
-
Komor, A. C. et al. Improved base excision repair inhibition and bacteriophage Mu Gam protein yields C:G-to-T:A base editors with higher efficiency and product purity. Sci. Adv. 3, eaao4774 (2017)
-
(2017)
Sci. Adv.
, vol.3
, pp. eaao4774
-
-
Komor, A.C.1
-
36
-
-
80052293623
-
Revealing off-target cleavage specificities of zinc-finger nucleases by in vitro selection
-
Pattanayak, V., Ramirez, C. L., Joung, J. K. & Liu, D. R. Revealing off-target cleavage specificities of zinc-finger nucleases by in vitro selection. Nat. Methods 8, 765-770 (2011).
-
(2011)
Nat. Methods
, vol.8
, pp. 765-770
-
-
Pattanayak, V.1
Ramirez, C.L.2
Joung, J.K.3
Liu, D.R.4
-
37
-
-
84952943845
-
Rationally engineered Cas9 nucleases with improved specificity
-
Slaymaker, I. M. et al. Rationally engineered Cas9 nucleases with improved specificity. Science 351, 84-88 (2016).
-
(2016)
Science
, vol.351
, pp. 84-88
-
-
Slaymaker, I.M.1
-
38
-
-
84963941043
-
High-fidelity CRISPR-Cas9 nucleases with no detectable genome-wide off-target effects
-
Kleinstiver, B. P. et al. High-fidelity CRISPR-Cas9 nucleases with no detectable genome-wide off-target effects. Nature 529, 490-495 (2016).
-
(2016)
Nature
, vol.529
, pp. 490-495
-
-
Kleinstiver, B.P.1
-
39
-
-
84891809093
-
ClinVar: Public archive of relationships among sequence variation and human phenotype
-
Landrum, M. J. et al. ClinVar: public archive of relationships among sequence variation and human phenotype. Nucleic Acids Res. 42, D980-D985 (2014).
-
(2014)
Nucleic Acids Res.
, vol.42
, pp. D980-D985
-
-
Landrum, M.J.1
-
40
-
-
2142738304
-
WebLogo: A sequence logo generator
-
Crooks, G. E., Hon, G., Chandonia, J. M. & Brenner, S. E. WebLogo: a sequence logo generator. Genome Res. 14, 1188-1190 (2004).
-
(2004)
Genome Res.
, vol.14
, pp. 1188-1190
-
-
Crooks, G.E.1
Hon, G.2
Chandonia, J.M.3
Brenner, S.E.4
|