메뉴 건너뛰기




Volumn 8, Issue 6, 2017, Pages

Proofreading-deficient coronaviruses adapt for increased fitness over long-term passage without reversion of exoribonuclease-inactivating mutations

Author keywords

Adaptive evolution; Competitive fitness; Coronavirus; Exoribonuclease; Plus strand RNA virus; Proofreading; Replication fidelity; RNA virus

Indexed keywords

AZACITIDINE; EXORIBONUCLEASE; FLUOROURACIL; NONSTRUCTURAL PROTEIN 14; RIBAVIRIN; RNA DIRECTED RNA POLYMERASE; UNCLASSIFIED DRUG; VIRAL PROTEIN; VIRUS RNA; ANTIVIRUS AGENT;

EID: 85039856776     PISSN: 21612129     EISSN: 21507511     Source Type: Journal    
DOI: 10.1128/mBio.01503-17     Document Type: Article
Times cited : (43)

References (88)
  • 1
    • 0027064537 scopus 로고
    • Lack of evidence for proofreading mechanisms associated with an RNA virus polymerase
    • Steinhauer DA, Domingo E, Holland JJ. 1992. Lack of evidence for proofreading mechanisms associated with an RNA virus polymerase. Gene 122:281-288. https://doi.org/10.1016/0378-1119(92)90216-C.
    • (1992) Gene , vol.122 , pp. 281-288
    • Steinhauer, D.A.1    Domingo, E.2    Holland, J.J.3
  • 3
    • 0033598717 scopus 로고    scopus 로고
    • Mutation rates among RNA viruses
    • Drake JW, Holland JJ. 1999. Mutation rates among RNA viruses. Proc Natl Acad Sci U S A 96:13910-13913. https://doi.org/10.1073/pnas.96.24.13910.
    • (1999) Proc Natl Acad Sci U S A , vol.96 , pp. 13910-13913
    • Drake, J.W.1    Holland, J.J.2
  • 4
    • 33847247125 scopus 로고    scopus 로고
    • Theory of lethal mutagenesis for viruses
    • Bull JJ, Sanjuan R, Wilke CO. 2007. Theory of lethal mutagenesis for viruses. J Virol 81:2930-2939. https://doi.org/10.1128/JVI.01624-06.
    • (2007) J Virol , vol.81 , pp. 2930-2939
    • Bull, J.J.1    Sanjuan, R.2    Wilke, C.O.3
  • 6
    • 84883774875 scopus 로고    scopus 로고
    • Correlation between mutation rate and genome size in riboviruses: Mutation rate of bacteriophage Qβ
    • Bradwell K, Combe M, Domingo-Calap P, Sanjuan R. 2013. Correlation between mutation rate and genome size in riboviruses: mutation rate of bacteriophage Qβ. Genetics 195:243-251. https://doi.org/10.1534/genetics.113.154963.
    • (2013) Genetics , vol.195 , pp. 243-251
    • Bradwell, K.1    Combe, M.2    Domingo-Calap, P.3    Sanjuan, R.4
  • 7
    • 62149152282 scopus 로고    scopus 로고
    • Extremely high mutation rate of a hammerhead viroid
    • Gago S, Elena SF, Flores R, Sanjuan R. 2009. Extremely high mutation rate of a hammerhead viroid. Science 323:1308-1308. https://doi.org/10.1126/science.1169202.
    • (2009) Science , vol.323 , pp. 1308
    • Gago, S.1    Elena, S.F.2    Flores, R.3    Sanjuan, R.4
  • 8
    • 77955475761 scopus 로고    scopus 로고
    • Distribution of fitness effects caused by single-nucleotide substitutions in bacteriophage f1
    • Peris JB, Davis P, Cuevas JM, Nebot MR, Sanjuan R. 2010. Distribution of fitness effects caused by single-nucleotide substitutions in bacteriophage f1. Genetics 185:603-609. https://doi.org/10.1534/genetics.110.115162.
    • (2010) Genetics , vol.185 , pp. 603-609
    • Peris, J.B.1    Davis, P.2    Cuevas, J.M.3    Nebot, M.R.4    Sanjuan, R.5
  • 10
    • 0032748221 scopus 로고    scopus 로고
    • Rate of deleterious mutation and the distribution of its effects on fitness in vesicular stomatitis virus
    • Elena SF, Moya A. 1999. Rate of deleterious mutation and the distribution of its effects on fitness in vesicular stomatitis virus. J Evol Biol 12:1078-1088. https://doi.org/10.1046/j.1420-9101.1999.00110.x.
    • (1999) J Evol Biol , vol.12 , pp. 1078-1088
    • Elena, S.F.1    Moya, A.2
  • 12
    • 2942565781 scopus 로고    scopus 로고
    • The distribution of fitness effects caused by single-nucleotide substitutions in an RNA virus
    • Sanjuan R, Moya A, Elena SF. 2004. The distribution of fitness effects caused by single-nucleotide substitutions in an RNA virus. Proc Natl Acad Sci U S A 101:8396-8401. https://doi.org/10.1073/pnas.0400146101.
    • (2004) Proc Natl Acad Sci U S A , vol.101 , pp. 8396-8401
    • Sanjuan, R.1    Moya, A.2    Elena, S.F.3
  • 14
    • 36048969246 scopus 로고    scopus 로고
    • High fidelity of murine hepatitis virus replication is decreased in nsp14 exoribonuclease mutants
    • Eckerle LD, Lu X, Sperry SM, Choi L, Denison MR. 2007. High fidelity of murine hepatitis virus replication is decreased in nsp14 exoribonuclease mutants. J Virol 81:12135-12144. https://doi.org/10.1128/JVI.01296-07.
    • (2007) J Virol , vol.81 , pp. 12135-12144
    • Eckerle, L.D.1    Lu, X.2    Sperry, S.M.3    Choi, L.4    Denison, M.R.5
  • 15
    • 84929603486 scopus 로고    scopus 로고
    • Mutations in coronavirus nonstructural protein 10 decrease virus replication fidelity
    • Smith EC, Case JB, Blanc H, Isakov O, Shomron N, Vignuzzi M, Denison MR. 2015. Mutations in coronavirus nonstructural protein 10 decrease virus replication fidelity. J Virol 89:6418-6426. https://doi.org/10.1128/JVI.00110-15.
    • (2015) J Virol , vol.89 , pp. 6418-6426
    • Smith, E.C.1    Case, J.B.2    Blanc, H.3    Isakov, O.4    Shomron, N.5    Vignuzzi, M.6    Denison, M.R.7
  • 16
    • 84883438898 scopus 로고    scopus 로고
    • Coronaviruses lacking exoribonuclease activity are susceptible to lethal mutagenesis: Evidence for proofreading and potential therapeutics
    • Smith EC, Blanc H, Surdel MC, Vignuzzi M, Denison MR. 2013. Coronaviruses lacking exoribonuclease activity are susceptible to lethal mutagenesis: evidence for proofreading and potential therapeutics. PLoS Pathog 9:e1003565. https://doi.org/10.1371/journal.ppat.1003565.
    • (2013) Plos Pathog , vol.9
    • Smith, E.C.1    Blanc, H.2    Surdel, M.C.3    Vignuzzi, M.4    Denison, M.R.5
  • 17
    • 84982233000 scopus 로고    scopus 로고
    • Homology-based identification of a mutation in the coronavirus RNA-dependent RNA polymerase that confers resistance to multiple mutagens
    • Sexton NR, Smith EC, Blanc H, Vignuzzi M, Peersen OB, Denison MR. 2016. Homology-based identification of a mutation in the coronavirus RNA-dependent RNA polymerase that confers resistance to multiple mutagens. J Virol 90:7415-7428. https://doi.org/10.1128/JVI.00080-16.
    • (2016) J Virol , vol.90 , pp. 7415-7428
    • Sexton, N.R.1    Smith, E.C.2    Blanc, H.3    Vignuzzi, M.4    Peersen, O.B.5    Denison, M.R.6
  • 18
    • 57349131683 scopus 로고    scopus 로고
    • Determinants of RNA-dependent RNA polymerase (In)fidelity revealed by kinetic analysis of the polymerase encoded by a foot-andmouth disease virus mutant with reduced sensitivity to ribavirin
    • Arias A, Arnold JJ, Sierra M, Smidansky ED, Domingo E, Cameron CE. 2008. Determinants of RNA-dependent RNA polymerase (in)fidelity revealed by kinetic analysis of the polymerase encoded by a foot-andmouth disease virus mutant with reduced sensitivity to ribavirin. J Virol 82:12346-12355. https://doi.org/10.1128/JVI.01297-08.
    • (2008) J Virol , vol.82 , pp. 12346-12355
    • Arias, A.1    Arnold, J.J.2    Sierra, M.3    Smidansky, E.D.4    Domingo, E.5    Cameron, C.E.6
  • 19
    • 84881162575 scopus 로고    scopus 로고
    • An increased replication fidelity mutant of foot-and-mouth disease virus retains fitness in vitro and virulence in vivo
    • Zeng J, Wang H, Xie X, Yang D, Zhou G, Yu L. 2013. An increased replication fidelity mutant of foot-and-mouth disease virus retains fitness in vitro and virulence in vivo. Antiviral Res 100:1-7. https://doi.org/10.1016/j.antiviral.2013.07.008.
    • (2013) Antiviral Res , vol.100 , pp. 1-7
    • Zeng, J.1    Wang, H.2    Xie, X.3    Yang, D.4    Zhou, G.5    Yu, L.6
  • 20
    • 84896904367 scopus 로고    scopus 로고
    • Ribavirinresistant variants of foot-and-mouth disease virus: The effect of restricted quasispecies diversity on viral virulence
    • Zeng J, Wang H, Xie X, Li C, Zhou G, Yang D, Yu L. 2014. Ribavirinresistant variants of foot-and-mouth disease virus: the effect of restricted quasispecies diversity on viral virulence. J Virol 88:4008-4020. https://doi.org/10.1128/JVI.03594-13.
    • (2014) J Virol , vol.88 , pp. 4008-4020
    • Zeng, J.1    Wang, H.2    Xie, X.3    Li, C.4    Zhou, G.5    Yang, D.6    Yu, L.7
  • 21
    • 84907704014 scopus 로고    scopus 로고
    • Foot-and-mouth disease virus low-fidelity polymerase mutants are attenuated
    • Xie X, Wang H, Zeng J, Li C, Zhou G, Yang D, Yu L. 2014. Foot-and-mouth disease virus low-fidelity polymerase mutants are attenuated. Arch Virol 159:2641-2650. https://doi.org/10.1007/s00705-014-2126-z.
    • (2014) Arch Virol , vol.159 , pp. 2641-2650
    • Xie, X.1    Wang, H.2    Zeng, J.3    Li, C.4    Zhou, G.5    Yang, D.6    Yu, L.7
  • 22
    • 33846813925 scopus 로고    scopus 로고
    • Foot-and-mouth disease virus mutant with decreased sensitivity to ribavirin: Implications for error catastrophe
    • Sierra M, Airaksinen A, Gonzalez-Lopez C, Agudo R, Arias A, Domingo E. 2007. Foot-and-mouth disease virus mutant with decreased sensitivity to ribavirin: implications for error catastrophe. J Virol 81:2012-2024. https://doi.org/10.1128/JVI.01606-06.
    • (2007) J Virol , vol.81 , pp. 2012-2024
    • Sierra, M.1    Airaksinen, A.2    Gonzalez-Lopez, C.3    Agudo, R.4    Arias, A.5    Domingo, E.6
  • 23
    • 31144465690 scopus 로고    scopus 로고
    • Quasispecies diversity determines pathogenesis through cooperative interactions in a viral population
    • Vignuzzi M, Stone JK, Arnold JJ, Cameron CE, Andino R. 2006. Quasispecies diversity determines pathogenesis through cooperative interactions in a viral population. Nature 439:344-348. https://doi.org/10.1038/nature04388.
    • (2006) Nature , vol.439 , pp. 344-348
    • Vignuzzi, M.1    Stone, J.K.2    Arnold, J.J.3    Cameron, C.E.4    Ino, R.5
  • 24
    • 38949184924 scopus 로고    scopus 로고
    • Engineering attenuated virus vaccines by controlling replication fidelity
    • Vignuzzi M, Wendt E, Andino R. 2008. Engineering attenuated virus vaccines by controlling replication fidelity. Nat Med 14:154-161. https://doi.org/10.1038/nm1726.
    • (2008) Nat Med , vol.14 , pp. 154-161
    • Vignuzzi, M.1    Wendt, E.2    Ino, R.3
  • 25
    • 0038809107 scopus 로고    scopus 로고
    • A single mutation in poliovirus RNAdependent RNA polymerase confers resistance to mutagenic nucleotide analogs via increased fidelity
    • Pfeiffer JK, Kirkegaard K. 2003. A single mutation in poliovirus RNAdependent RNA polymerase confers resistance to mutagenic nucleotide analogs via increased fidelity. Proc Natl Acad Sci U S A 100:7289-7294. https://doi.org/10.1073/pnas.1232294100.
    • (2003) Proc Natl Acad Sci U S A , vol.100 , pp. 7289-7294
    • Pfeiffer, J.K.1    Kirkegaard, K.2
  • 26
    • 21844431621 scopus 로고    scopus 로고
    • Remote site control of an active site fidelity checkpoint in a viral RNA-dependent RNA polymerase
    • Arnold JJ, Vignuzzi M, Stone JK, Andino R, Cameron CE. 2005. Remote site control of an active site fidelity checkpoint in a viral RNA-dependent RNA polymerase. J Biol Chem 280:25706-25716. https://doi.org/10.1074/jbc.M503444200.
    • (2005) J Biol Chem , vol.280 , pp. 25706-25716
    • Arnold, J.J.1    Vignuzzi, M.2    Stone, J.K.3    Ino, R.4    Cameron, C.E.5
  • 27
    • 84887467058 scopus 로고    scopus 로고
    • Vaccine-derived mutation in motif D of poliovirus RNA-dependent RNA polymerase lowers nucleotide incorporation fidelity
    • Liu X, Yang X, Lee CA, Moustafa IM, Smidansky ED, Lum D, Arnold JJ, Cameron CE, Boehr DD. 2013. Vaccine-derived mutation in motif D of poliovirus RNA-dependent RNA polymerase lowers nucleotide incorporation fidelity. J Biol Chem 288:32753-32765. https://doi.org/10.1074/jbc.M113.484428.
    • (2013) J Biol Chem , vol.288 , pp. 32753-32765
    • Liu, X.1    Yang, X.2    Lee, C.A.3    Moustafa, I.M.4    Smidansky, E.D.5    Lum, D.6    Arnold, J.J.7    Cameron, C.E.8    Boehr, D.D.9
  • 28
    • 84866423000 scopus 로고    scopus 로고
    • A polymerase mechanism-based strategy for viral attenuation and vaccine development
    • Weeks SA, Lee CA, Zhao Y, Smidansky ED, August A, Arnold JJ, Cameron CE. 2012. A polymerase mechanism-based strategy for viral attenuation and vaccine development. J Biol Chem 287:31618-31622. https://doi.org/10.1074/jbc.C112.401471.
    • (2012) J Biol Chem , vol.287 , pp. 31618-31622
    • Weeks, S.A.1    Lee, C.A.2    Zhao, Y.3    Smidansky, E.D.4    August, A.5    Arnold, J.J.6    Cameron, C.E.7
  • 30
    • 80053164707 scopus 로고    scopus 로고
    • Arbovirus high fidelity variant loses fitness in mosquitoes and mice
    • Coffey LL, Beeharry Y, Borderia AV, Blanc H, Vignuzzi M. 2011. Arbovirus high fidelity variant loses fitness in mosquitoes and mice. Proc Natl Acad Sci U S A 108:16038-16043. https://doi.org/10.1073/pnas.1111650108.
    • (2011) Proc Natl Acad Sci U S A , vol.108 , pp. 16038-16043
    • Coffey, L.L.1    Beeharry, Y.2    Borderia, A.V.3    Blanc, H.4    Vignuzzi, M.5
  • 31
    • 84893756804 scopus 로고    scopus 로고
    • Alphavirus mutator variants present host-specific defects and attenuation in mammalian and insect models
    • Rozen-Gagnon K, Stapleford KA, Mongelli V, Blanc H, Failloux AB, Saleh MC, Vignuzzi M. 2014. Alphavirus mutator variants present host-specific defects and attenuation in mammalian and insect models. PLoS Pathog 10:e1003877. https://doi.org/10.1371/journal.ppat.1003877.
    • (2014) Plos Pathog , vol.10
    • Rozen-Gagnon, K.1    Stapleford, K.A.2    Mongelli, V.3    Blanc, H.4    Failloux, A.B.5    Saleh, M.C.6    Vignuzzi, M.7
  • 34
    • 84919427801 scopus 로고    scopus 로고
    • Structure-function relationships underlying the replication fidelity of viral RNA-dependent RNA polymerases
    • Campagnola G, McDonald S, Beaucourt S, Vignuzzi M, Peersen OB. 2015. Structure-function relationships underlying the replication fidelity of viral RNA-dependent RNA polymerases. J Virol 89:275-286. https://doi.org/10.1128/JVI.01574-14.
    • (2015) J Virol , vol.89 , pp. 275-286
    • Campagnola, G.1    McDonald, S.2    Beaucourt, S.3    Vignuzzi, M.4    Peersen, O.B.5
  • 35
    • 84881378030 scopus 로고    scopus 로고
    • A study of the virulence in mice of high copying fidelity variants of human enterovirus 71
    • Sadeghipour S, McMinn PC. 2013. A study of the virulence in mice of high copying fidelity variants of human enterovirus 71. Virus Res 176: 265-272. https://doi.org/10.1016/j.virusres.2013.06.019.
    • (2013) Virus Res , vol.176 , pp. 265-272
    • Sadeghipour, S.1    McMinn, P.C.2
  • 36
    • 84873023551 scopus 로고    scopus 로고
    • Ribavirin-resistant mutants of human enterovirus 71 express a high replication fidelity phenotype during growth in cell culture
    • Sadeghipour S, Bek EJ, McMinn PC. 2013. Ribavirin-resistant mutants of human enterovirus 71 express a high replication fidelity phenotype during growth in cell culture. J Virol 87:1759-1769. https://doi.org/10.1128/JVI.02139-12.
    • (2013) J Virol , vol.87 , pp. 1759-1769
    • Sadeghipour, S.1    Bek, E.J.2    McMinn, P.C.3
  • 37
    • 84899079298 scopus 로고    scopus 로고
    • Attenuation of human enterovirus 71 highreplication-fidelity variants in AG129 mice
    • Meng T, Kwang J. 2014. Attenuation of human enterovirus 71 highreplication-fidelity variants in AG129 mice. J Virol 88:5803-5815. https://doi.org/10.1128/JVI.00289-14.
    • (2014) J Virol , vol.88 , pp. 5803-5815
    • Meng, T.1    Kwang, J.2
  • 38
    • 84870946428 scopus 로고    scopus 로고
    • A live, impaired-fidelity coronavirus vaccine protects in an aged, immunocompromised mouse model of lethal disease
    • Graham RL, Becker MM, Eckerle LD, Bolles M, Denison MR, Baric RS. 2012. A live, impaired-fidelity coronavirus vaccine protects in an aged, immunocompromised mouse model of lethal disease. Nat Med 18:1820-1826. https://doi.org/10.1038/nm.2972.
    • (2012) Nat Med , vol.18 , pp. 1820-1826
    • Graham, R.L.1    Becker, M.M.2    Eckerle, L.D.3    Bolles, M.4    Denison, M.R.5    Baric, R.S.6
  • 39
    • 85016934946 scopus 로고    scopus 로고
    • Thinking outside the triangle: Replication fidelity of the largest RNA viruses
    • Smith EC, Sexton NR, Denison MR. 2014. Thinking outside the triangle: replication fidelity of the largest RNA viruses. Annu Rev Virol 1:111-132. https://doi.org/10.1146/annurev-virology-031413-085507.
    • (2014) Annu Rev Virol , vol.1 , pp. 111-132
    • Smith, E.C.1    Sexton, N.R.2    Denison, M.R.3
  • 40
    • 33645093947 scopus 로고    scopus 로고
    • Nidovirales: Evolving the largest RNA virus genome
    • Gorbalenya AE, Enjuanes L, Ziebuhr J, Snijder EJ. 2006. Nidovirales: evolving the largest RNA virus genome. Virus Res 117:17-37. https://doi.org/10.1016/j.virusres.2006.01.017.
    • (2006) Virus Res , vol.117 , pp. 17-37
    • Gorbalenya, A.E.1    Enjuanes, L.2    Ziebuhr, J.3    Snijder, E.J.4
  • 42
    • 33645518839 scopus 로고    scopus 로고
    • Discovery of an RNA virus 3’->5’ exoribonuclease that is critically involved in coronavirus RNA synthesis
    • Minskaia E, Hertzig T, Gorbalenya AE, Campanacci V, Cambillau C, Canard B, Ziebuhr J. 2006. Discovery of an RNA virus 3’->5’ exoribonuclease that is critically involved in coronavirus RNA synthesis. Proc Natl Acad Sci U S A 103:5108-5113. https://doi.org/10.1073/pnas.0508200103.
    • (2006) Proc Natl Acad Sci U S A , vol.103 , pp. 5108-5113
    • Minskaia, E.1    Hertzig, T.2    Gorbalenya, A.E.3    Campanacci, V.4    Cambillau, C.5    Canard, B.6    Ziebuhr, J.7
  • 43
    • 0042164218 scopus 로고    scopus 로고
    • Unique and conserved features of genome and proteome of SARS-coronavirus, an early split-off from the coronavirus group 2 lineage
    • Snijder EJ, Bredenbeek PJ, Dobbe JC, Thiel V, Ziebuhr J, Poon LLM, Guan Y, Rozanov M, Spaan WJM, Gorbalenya AE. 2003. Unique and conserved features of genome and proteome of SARS-coronavirus, an early split-off from the coronavirus group 2 lineage. J Mol Biol 331:991-1004. https://doi.org/10.1016/S0022-2836(03)00865-9.
    • (2003) J Mol Biol , vol.331 , pp. 991-1004
    • Snijder, E.J.1    Bredenbeek, P.J.2    Dobbe, J.C.3    Thiel, V.4    Ziebuhr, J.5    Poon, L.6    Guan, Y.7    Rozanov, M.8    Spaan, W.9    Gorbalenya, A.E.10
  • 44
    • 84938086703 scopus 로고    scopus 로고
    • Structural basis and functional analysis of the SARS coronavirus nsp14-nsp10 complex
    • Ma Y, Wu L, Shaw N, Gao Y, Wang J, Sun Y, Lou Z, Yan L, Zhang R, Rao Z. 2015. Structural basis and functional analysis of the SARS coronavirus nsp14-nsp10 complex. Proc Natl Acad Sci U S A 112:9436-9441. https://doi.org/10.1073/pnas.1508686112.
    • (2015) Proc Natl Acad Sci U S A , vol.112 , pp. 9436-9441
    • Ma, Y.1    Wu, L.2    Shaw, N.3    Gao, Y.4    Wang, J.5    Sun, Y.6    Lou, Z.7    Yan, L.8    Zhang, R.9    Rao, Z.10
  • 45
    • 0035283033 scopus 로고    scopus 로고
    • Exoribonuclease superfamilies: Structural analysis and phylogenetic distribution
    • Zuo Y, Deutscher MP. 2001. Exoribonuclease superfamilies: structural analysis and phylogenetic distribution. Nucleic Acids Res 29:1017-1026. https://doi.org/10.1093/nar/29.5.1017.
    • (2001) Nucleic Acids Res , vol.29 , pp. 1017-1026
    • Zuo, Y.1    Deutscher, M.P.2
  • 46
    • 84862203582 scopus 로고    scopus 로고
    • RNA 3’-end mismatch excision by the severe acute respiratory syndrome coronavirus nonstructural protein nsp10/nsp14 exoribonuclease complex
    • Bouvet M, Imbert I, Subissi L, Gluais L, Canard B, Decroly E. 2012. RNA 3’-end mismatch excision by the severe acute respiratory syndrome coronavirus nonstructural protein nsp10/nsp14 exoribonuclease complex. Proc Natl Acad Sci U S A 109:9372-9377. https://doi.org/10.1073/pnas.1201130109.
    • (2012) Proc Natl Acad Sci U S A , vol.109 , pp. 9372-9377
    • Bouvet, M.1    Imbert, I.2    Subissi, L.3    Gluais, L.4    Canard, B.5    Decroly, E.6
  • 47
    • 0025799395 scopus 로고
    • Heterogeneity of gene expression of the hemagglutinin-esterase (HE) protein of murine coronaviruses
    • Yokomori K, Banner LR, Lai MMC. 1991. Heterogeneity of gene expression of the hemagglutinin-esterase (HE) protein of murine coronaviruses. Virology 183:647-657. https://doi.org/10.1016/0042-6822(91)90994-M.
    • (1991) Virology , vol.183 , pp. 647-657
    • Yokomori, K.1    Banner, L.R.2    Lai, M.M.C.3
  • 48
    • 0024094778 scopus 로고    scopus 로고
    • 1988. Sequence of mouse hepatitis virus A59 mRNA 2: Indications for RNA recombination between coronaviruses and influenza C virus
    • Luytjes W, Bredenbeek PJ, Noten AF, Horzinek MC, Spaan WJ. 1988. Sequence of mouse hepatitis virus A59 mRNA 2: indications for RNA recombination between coronaviruses and influenza C virus. Virology 166:415-422. https://doi.org/10.1016/0042-6822(88)90512-0.
    • Virology , vol.166 , pp. 415-422
    • Luytjes, W.1    Bredenbeek, P.J.2    Noten, A.F.3    Horzinek, M.C.4    Spaan, W.J.5
  • 49
    • 0025990903 scopus 로고
    • Mouse hepatitis virus S RNA sequence reveals that nonstructural proteins ns4 and ns5a are not essential for murine coronavirus replication
    • Yokomori K, Lai MM. 1991. Mouse hepatitis virus S RNA sequence reveals that nonstructural proteins ns4 and ns5a are not essential for murine coronavirus replication. J Virol 65:5605-5608.
    • (1991) J Virol , vol.65 , pp. 5605-5608
    • Yokomori, K.1    Lai, M.M.2
  • 50
    • 29744463888 scopus 로고    scopus 로고
    • Luxury at a cost? Recombinant mouse hepatitis viruses expressing the accessory hemagglutinin esterase protein display reduced fitness in vitro
    • Lissenberg A, Vrolijk MM, van Vliet ALW, Langereis MA, de Groot-Mijnes JDF, Rottier PJM, de Groot RJ. 2005. Luxury at a cost? Recombinant mouse hepatitis viruses expressing the accessory hemagglutinin esterase protein display reduced fitness in vitro. J Virol 79:15054-15063. https://doi.org/10.1128/JVI.79.24.15054-15063.2005.
    • (2005) J Virol , vol.79 , pp. 15054-15063
    • Lissenberg, A.1    Vrolijk, M.M.2    Van Vliet, A.3    Langereis, M.A.4    De Groot-Mijnes, J.5    Rottier, P.6    De Groot, R.J.7
  • 51
    • 56449089281 scopus 로고    scopus 로고
    • Murine coronaviruses encoding nsp2 at different genomic loci have altered replication, protein expression, and localization
    • Gadlage MJ, Graham RL, Denison MR. 2008. Murine coronaviruses encoding nsp2 at different genomic loci have altered replication, protein expression, and localization. J Virol 82:11964-11969. https://doi.org/10.1128/JVI.01126-07.
    • (2008) J Virol , vol.82 , pp. 11964-11969
    • Gadlage, M.J.1    Graham, R.L.2    Denison, M.R.3
  • 52
    • 84862297105 scopus 로고    scopus 로고
    • Antagonism of the interferon-induced OAS-RNase L pathway by murine coronavirus ns2 protein is required for virus replication and liver pathology
    • Zhao L, Jha BK, Wu A, Elliott R, Ziebuhr J, Gorbalenya AE, Silverman RH, Weiss SR. 2012. Antagonism of the interferon-induced OAS-RNase L pathway by murine coronavirus ns2 protein is required for virus replication and liver pathology. Cell Host Microbe 11:607-616. https://doi.org/10.1016/j.chom.2012.04.011.
    • (2012) Cell Host Microbe , vol.11 , pp. 607-616
    • Zhao, L.1    Jha, B.K.2    Wu, A.3    Elliott, R.4    Ziebuhr, J.5    Gorbalenya, A.E.6    Silverman, R.H.7    Weiss, S.R.8
  • 53
    • 84994048698 scopus 로고    scopus 로고
    • Antagonism of RNase L is required for murine coronavirus replication in Kupffer cells and liver sinusoidal endothelial cells but not in hepatocytes
    • Li Y, Weiss SR. 2016. Antagonism of RNase L is required for murine coronavirus replication in Kupffer cells and liver sinusoidal endothelial cells but not in hepatocytes. J Virol 90:9826-9832. https://doi.org/10.1128/JVI.01423-16.
    • (2016) J Virol , vol.90 , pp. 9826-9832
    • Li, Y.1    Weiss, S.R.2
  • 55
    • 84963726977 scopus 로고    scopus 로고
    • Crystal structure of the mouse hepatitis virus ns2 phosphodiesterase domain that antagonizes RNase L activation
    • Sui B, Huang J, Jha BK, Yin P, Zhou M, Fu ZF, Silverman RH, Weiss SR, Peng G, Zhao L. 2016. Crystal structure of the mouse hepatitis virus ns2 phosphodiesterase domain that antagonizes RNase L activation. J Gen Virol 97:880-886. https://doi.org/10.1099/jgv.0.000395.
    • (2016) J Gen Virol , vol.97 , pp. 880-886
    • Sui, B.1    Huang, J.2    Jha, B.K.3    Yin, P.4    Zhou, M.5    Fu, Z.F.6    Silverman, R.H.7    Weiss, S.R.8    Peng, G.9    Zhao, L.10
  • 56
    • 0025107069 scopus 로고
    • Murine coronavirus nonstructural protein ns2 is not essential for virus replication in transformed cells
    • Schwarz B, Routledge E, Siddell SG. 1990. Murine coronavirus nonstructural protein ns2 is not essential for virus replication in transformed cells. J Virol 64:4784-4791.
    • (1990) J Virol , vol.64 , pp. 4784-4791
    • Schwarz, B.1    Routledge, E.2    Siddell, S.G.3
  • 57
    • 80053932661 scopus 로고    scopus 로고
    • Cell-type-specific type I interferon antagonism influences organ tropism of murine coronavirus
    • Zhao L, Rose KM, Elliott R, Van Rooijen N, Weiss SR. 2011. Cell-type-specific type I interferon antagonism influences organ tropism of murine coronavirus. J Virol 85:10058-10068. https://doi.org/10.1128/JVI.05075-11.
    • (2011) J Virol , vol.85 , pp. 10058-10068
    • Zhao, L.1    Rose, K.M.2    Elliott, R.3    Van Rooijen, N.4    Weiss, S.R.5
  • 58
    • 84897540760 scopus 로고    scopus 로고
    • Delayed lysis confers resistance to the nucleoside analogue 5-fluorouracil and alleviates mutation accumulation in the single-stranded DNA bacteriophage φX174
    • Pereira-Gomez M, Sanjuan R. 2014. Delayed lysis confers resistance to the nucleoside analogue 5-fluorouracil and alleviates mutation accumulation in the single-stranded DNA bacteriophage φX174. J Virol 88: 5042-5049. https://doi.org/10.1128/JVI.02147-13.
    • (2014) J Virol , vol.88 , pp. 5042-5049
    • Pereira-Gomez, M.1    Sanjuan, R.2
  • 59
    • 40649100793 scopus 로고    scopus 로고
    • Structure-function relationships among RNA-dependent RNA polymerases
    • Ng KKS, Arnold JJ, Cameron CE. 2008. Structure-function relationships among RNA-dependent RNA polymerases. Curr Top Microbiol Immunol 320:137-156. https://doi.org/10.1007/978-3-540-75157-1_7.
    • (2008) Curr Top Microbiol Immunol , vol.320 , pp. 137-156
    • Ng, K.1    Arnold, J.J.2    Cameron, C.E.3
  • 60
    • 0141856288 scopus 로고    scopus 로고
    • Characterization of the expression, intracellular localization, and replication complex association of the putative mouse hepatitis virus RNA-dependent RNA polymerase
    • Brockway SM, Clay CT, Lu XT, Denison MR. 2003. Characterization of the expression, intracellular localization, and replication complex association of the putative mouse hepatitis virus RNA-dependent RNA polymerase. J Virol 77:10515-10527. https://doi.org/10.1128/JVI.77.19.10515-10527.2003.
    • (2003) J Virol , vol.77 , pp. 10515-10527
    • Brockway, S.M.1    Clay, C.T.2    Lu, X.T.3    Denison, M.R.4
  • 62
    • 84930074657 scopus 로고    scopus 로고
    • The Phyre2 web portal for protein modeling, prediction and analysis
    • Kelley LA, Mezulis S, Yates CM, Wass MN, Sternberg MJE. 2015. The Phyre2 web portal for protein modeling, prediction and analysis. Nat Protoc 10:845-858. https://doi.org/10.1038/nprot.2015.053.
    • (2015) Nat Protoc , vol.10 , pp. 845-858
    • Kelley, L.A.1    Mezulis, S.2    Yates, C.M.3    Wass, M.N.4    Sternberg, M.J.E.5
  • 64
    • 34249940286 scopus 로고    scopus 로고
    • Murine hepatitis virus replicase protein nsp10 is a critical regulator of viral RNA synthesis
    • Donaldson EF, Sims AC, Graham RL, Denison MR, Baric RS. 2007. Murine hepatitis virus replicase protein nsp10 is a critical regulator of viral RNA synthesis. J Virol 81:6356-6368. https://doi.org/10.1128/JVI.02805-06.
    • (2007) J Virol , vol.81 , pp. 6356-6368
    • Donaldson, E.F.1    Sims, A.C.2    Graham, R.L.3    Denison, M.R.4    Baric, R.S.5
  • 65
    • 0036182633 scopus 로고    scopus 로고
    • Ribavirin’s antiviral mechanism of action: Lethal mutagenesis?
    • Crotty S, Cameron C, Andino R. 2002. Ribavirin’s antiviral mechanism of action: lethal mutagenesis? J Mol Med 80:86-95. https://doi.org/10.1007/s00109-001-0308-0.
    • (2002) J Mol Med , vol.80 , pp. 86-95
    • Crotty, S.1    Cameron, C.2    Ino, R.3
  • 66
    • 0026528541 scopus 로고
    • 5-Azacytidine and RNA secondary structure increase the retrovirus mutation rate
    • Pathak VK, Temin HM. 1992. 5-Azacytidine and RNA secondary structure increase the retrovirus mutation rate. J Virol 66:3093-3100.
    • (1992) J Virol , vol.66 , pp. 3093-3100
    • Pathak, V.K.1    Temin, H.M.2
  • 68
    • 0026085471 scopus 로고
    • The The 3’-5’ exonuclease of DNA polymerase I of Escherichia coli: Contribution of each amino acid at the active site to the reaction
    • Derbyshire V, Grindley ND, Joyce CM. 1991. The The 3’-5’ exonuclease of DNA polymerase I of Escherichia coli: contribution of each amino acid at the active site to the reaction. EMBO J 10:17-24.
    • (1991) EMBO J , vol.10 , pp. 17-24
    • Derbyshire, V.1    Grindley, N.D.2    Joyce, C.M.3
  • 69
    • 84971393087 scopus 로고    scopus 로고
    • Mutagenesis of coronavirus nsp14 reveals its potential role in modulation of the innate immune response
    • Becares M, Pascual-Iglesias A, Nogales A, Sola I, Enjuanes L, Zuniga S. 2016. Mutagenesis of coronavirus nsp14 reveals its potential role in modulation of the innate immune response. J Virol 90:5399-5414. https://doi.org/10.1128/JVI.03259-15.
    • (2016) J Virol , vol.90 , pp. 5399-5414
    • Becares, M.1    Pascual-Iglesias, A.2    Nogales, A.3    Sola, I.4    Enjuanes, L.5    Zuniga, S.6
  • 74
    • 0038322040 scopus 로고    scopus 로고
    • The herpes simplex virus type 1 DNA polymerase processivity factor increases fidelity without altering pre-steady-state rate constants for polymerization or excision
    • Chaudhuri M, Song L, Parris DS. 2003. The herpes simplex virus type 1 DNA polymerase processivity factor increases fidelity without altering pre-steady-state rate constants for polymerization or excision. J Biol Chem 278:8996-9004. https://doi.org/10.1074/jbc.M210023200.
    • (2003) J Biol Chem , vol.278 , pp. 8996-9004
    • Chaudhuri, M.1    Song, L.2    Parris, D.S.3
  • 75
    • 84956638813 scopus 로고    scopus 로고
    • The β2 clamp in the Mycobacterium tuberculosis DNA polymerase III αβ2ε replicase promotes polymerization and reduces exonuclease activity
    • Gu S, Li W, Zhang H, Fleming J, Yang W, Wang S, Wei W, Zhou J, Zhu G, Deng J, Hou J, Zhou Y, Lin S, Zhang XE, Bi L. 2016. The β2 clamp in the Mycobacterium tuberculosis DNA polymerase III αβ2ε replicase promotes polymerization and reduces exonuclease activity. Sci Rep 6:18418. https://doi.org/10.1038/srep18418.
    • (2016) Sci Rep , vol.6 , pp. 18418
    • Gu, S.1    Li, W.2    Zhang, H.3    Fleming, J.4    Yang, W.5    Wang, S.6    Wei, W.7    Zhou, J.8    Zhu, G.9    Deng, J.10    Hou, J.11    Zhou, Y.12    Lin, S.13    Zhang, X.E.14    Bi, L.15
  • 76
  • 77
    • 84964470509 scopus 로고    scopus 로고
    • Involvement of a joker mutation in a polymerase-independent lethal mutagenesis escape mechanism
    • Agudo R, de la Higuera I, Arias A, Grande-Perez A, Domingo E. 2016. Involvement of a joker mutation in a polymerase-independent lethal mutagenesis escape mechanism. Virology 494:257-266. https://doi.org/10.1016/j.virol.2016.04.023.
    • (2016) Virology , vol.494 , pp. 257-266
    • Agudo, R.1    De La Higuera, I.2    Arias, A.3    Grande-Perez, A.4    Domingo, E.5
  • 79
    • 7644238616 scopus 로고    scopus 로고
    • The severe acute respiratory syndrome coronavirus Nsp15 protein is an endoribonuclease that prefers manganese as a cofactor
    • Bhardwaj K, Guarino L, Kao CC. 2004. The severe acute respiratory syndrome coronavirus Nsp15 protein is an endoribonuclease that prefers manganese as a cofactor. J Virol 78:12218-12224. https://doi.org/10.1128/JVI.78.22.12218-12224.2004.
    • (2004) J Virol , vol.78 , pp. 12218-12224
    • Bhardwaj, K.1    Guarino, L.2    Kao, C.C.3
  • 80
    • 34347327212 scopus 로고    scopus 로고
    • Selection for robustness in mutagenized RNA viruses
    • Sanjuan R, Cuevas JM, Furio V, Holmes EC, Moya A. 2007. Selection for robustness in mutagenized RNA viruses. PLoS Genet 3:e93. https://doi.org/10.1371/journal.pgen.0030093.
    • (2007) Plos Genet , vol.3
    • Sanjuan, R.1    Cuevas, J.M.2    Furio, V.3    Holmes, E.C.4    Moya, A.5
  • 81
    • 84897648142 scopus 로고    scopus 로고
    • Evolvability and robustness in populations of RNA virus Φ6
    • Goldhill D, Lee A, Williams ESCP, Turner PE. 2014. Evolvability and robustness in populations of RNA virus Φ6. Front Microbiol 5:35. https://doi.org/10.3389/fmicb.2014.00035.
    • (2014) Front Microbiol , vol.5 , pp. 35
    • Goldhill, D.1    Lee, A.2    Williams, E.3    Turner, P.E.4
  • 83
    • 84869189162 scopus 로고    scopus 로고
    • Codon usage determines the mutational robustness, evolutionary capacity, and virulence of an RNA virus
    • Lauring AS, Acevedo A, Cooper SB, Andino R. 2012. Codon usage determines the mutational robustness, evolutionary capacity, and virulence of an RNA virus. Cell Host Microbe 12:623-632. https://doi.org/10.1016/j.chom.2012.10.008.
    • (2012) Cell Host Microbe , vol.12 , pp. 623-632
    • Lauring, A.S.1    Acevedo, A.2    Cooper, S.B.3    Ino, R.4
  • 84
    • 84876406925 scopus 로고    scopus 로고
    • The role of mutational robustness in RNA virus evolution
    • Lauring AS, Frydman J, Andino R. 2013. The role of mutational robustness in RNA virus evolution. Nat Rev Microbiol 11:327-336. https://doi.org/10.1038/nrmicro3003.
    • (2013) Nat Rev Microbiol , vol.11 , pp. 327-336
    • Lauring, A.S.1    Frydman, J.2    Ino, R.3
  • 85
    • 85019101126 scopus 로고    scopus 로고
    • Plaques formed by mutagenized viral populations have elevated coinfection frequencies
    • Aguilera ER, Erickson AK, Jesudhasan PR, Robinson CM, Pfeiffer JK. 2017. Plaques formed by mutagenized viral populations have elevated coinfection frequencies. mBio 8:e02020-16. https://doi.org/10.1128/mBio.02020-16.
    • (2017) Mbio , vol.8 , pp. e02016-e02020
    • Aguilera, E.R.1    Erickson, A.K.2    Jesudhasan, P.R.3    Robinson, C.M.4    Pfeiffer, J.K.5
  • 86
    • 84857851921 scopus 로고    scopus 로고
    • Mutational robustness of an RNA virus influences sensitivity to lethal mutagenesis
    • Graci JD, Gnadig NF, Galarraga JE, Castro C, Vignuzzi M, Cameron CE. 2012. Mutational robustness of an RNA virus influences sensitivity to lethal mutagenesis. J Virol 86:2869-2873. https://doi.org/10.1128/JVI.05712-11.
    • (2012) J Virol , vol.86 , pp. 2869-2873
    • Graci, J.D.1    Gnadig, N.F.2    Galarraga, J.E.3    Castro, C.4    Vignuzzi, M.5    Cameron, C.E.6
  • 87
    • 77955488013 scopus 로고    scopus 로고
    • Does mutational robustness inhibit extinction by lethal mutagenesis in viral populations?
    • O’Dea EB, Keller TE, Wilke CO. 2010. Does mutational robustness inhibit extinction by lethal mutagenesis in viral populations? PLoS Comput Biol 6:e1000811. https://doi.org/10.1371/journal.pcbi.1000811.
    • (2010) Plos Comput Biol , vol.6
    • O’Dea, E.B.1    Keller, T.E.2    Wilke, C.O.3
  • 88
    • 0036838992 scopus 로고    scopus 로고
    • Systematic assembly of a full-length infectious cDNA of mouse hepatitis virus strain A59
    • Yount B, Denison MR, Weiss SR, Baric RS. 2002. Systematic assembly of a full-length infectious cDNA of mouse hepatitis virus strain A59. J Virol 76:11065-11078. https://doi.org/10.1128/JVI.76.21.11065-11078.2002.
    • (2002) J Virol , vol.76 , pp. 11065-11078
    • Yount, B.1    Denison, M.R.2    Weiss, S.R.3    Baric, R.S.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.