-
1
-
-
0038981463
-
Frequency modulation detection using high-Q cantilevers for enhanced force microscope sensitivity
-
Albrecht T.R., Grütter P., Horne D., Rugar D. Frequency modulation detection using high-Q cantilevers for enhanced force microscope sensitivity. J. Appl. Physiol. 1991, 69:668-673.
-
(1991)
J. Appl. Physiol.
, vol.69
, pp. 668-673
-
-
Albrecht, T.R.1
Grütter, P.2
Horne, D.3
Rugar, D.4
-
2
-
-
0030856429
-
MutS mediates heteroduplex loop formation by a translocation mechanism
-
Allen D.J., Makhov A., Grilley M., Taylor J., Thresher R., Modrich P., Griffith J.D. MutS mediates heteroduplex loop formation by a translocation mechanism. EMBO J. 1997, 16:4467-4476.
-
(1997)
EMBO J.
, vol.16
, pp. 4467-4476
-
-
Allen, D.J.1
Makhov, A.2
Grilley, M.3
Taylor, J.4
Thresher, R.5
Modrich, P.6
Griffith, J.D.7
-
3
-
-
79251512950
-
Recent trends in surface characterization and chemistry with high-resolution scanning force methods
-
Barth C., Foster A.S., Henry C.R., Shluger A.L. Recent trends in surface characterization and chemistry with high-resolution scanning force methods. Adv. Mater. 2011, 23:477-501.
-
(2011)
Adv. Mater.
, vol.23
, pp. 477-501
-
-
Barth, C.1
Foster, A.S.2
Henry, C.R.3
Shluger, A.L.4
-
4
-
-
0029966653
-
Visualization and analysis of unfolded nucleosomes associated with transcribing chromatin
-
Bazett-Jones D.P., Mendez E., Czarnota G.J., Ottensmeyer F.P., Allfrey V.G. Visualization and analysis of unfolded nucleosomes associated with transcribing chromatin. Nucleic Acids Res. 1996, 24:321-329.
-
(1996)
Nucleic Acids Res.
, vol.24
, pp. 321-329
-
-
Bazett-Jones, D.P.1
Mendez, E.2
Czarnota, G.J.3
Ottensmeyer, F.P.4
Allfrey, V.G.5
-
5
-
-
84957428149
-
TRF2-Mediated Control of Telomere DNA Topology as a Mechanism for Chromosome Chromosome-End Protection as a Mechanism for Chromosome Chromosome-End Protection
-
this issue
-
Benarroch-Popivker D., Pisano S., Mendez-Bermudez A., Lototska L., Kaur P., Bauwens S., Djerbi N., Latrick C.M., Fraisier V., Pei B., et al. TRF2-Mediated Control of Telomere DNA Topology as a Mechanism for Chromosome Chromosome-End Protection as a Mechanism for Chromosome Chromosome-End Protection. Mol Cell 2016, 61:274-286. this issue.
-
(2016)
Mol Cell
, vol.61
, pp. 274-286
-
-
Benarroch-Popivker, D.1
Pisano, S.2
Mendez-Bermudez, A.3
Lototska, L.4
Kaur, P.5
Bauwens, S.6
Djerbi, N.7
Latrick, C.M.8
Fraisier, V.9
Pei, B.10
-
6
-
-
0036352218
-
Local Polarization, Charge Compensation, and Chemical Interactions on Ferroelectric Surfaces: a Route Toward New Nanostructures
-
MRS Proceedings 688.
-
Bonnell, D.A., and Kalinin, S.V. (2001). Local Polarization, Charge Compensation, and Chemical Interactions on Ferroelectric Surfaces: a Route Toward New Nanostructures. MRS Proceedings 688.
-
(2001)
-
-
Bonnell, D.A.1
Kalinin, S.V.2
-
7
-
-
84909594483
-
Structure of the large ribosomal subunit from human mitochondria
-
Brown A., Amunts A., Bai X.C., Sugimoto Y., Edwards P.C., Murshudov G., Scheres S.H., Ramakrishnan V. Structure of the large ribosomal subunit from human mitochondria. Science 2014, 346:718-722.
-
(2014)
Science
, vol.346
, pp. 718-722
-
-
Brown, A.1
Amunts, A.2
Bai, X.C.3
Sugimoto, Y.4
Edwards, P.C.5
Murshudov, G.6
Scheres, S.H.7
Ramakrishnan, V.8
-
8
-
-
0028077880
-
Biochemical and structural applications of scanning force microscopy
-
Bustamante C., Erie D.A., Keller D. Biochemical and structural applications of scanning force microscopy. Curr. Opin. Struct. Biol. 1994, 4:750-760.
-
(1994)
Curr. Opin. Struct. Biol.
, vol.4
, pp. 750-760
-
-
Bustamante, C.1
Erie, D.A.2
Keller, D.3
-
9
-
-
0003854118
-
Visualization and analysis of chromatin by scanning force microscopy
-
Bustamante C., Zuccheri G., Leuba S.H., Yang G., Samori B. Visualization and analysis of chromatin by scanning force microscopy. Methods 1997, 12:73-83.
-
(1997)
Methods
, vol.12
, pp. 73-83
-
-
Bustamante, C.1
Zuccheri, G.2
Leuba, S.H.3
Yang, G.4
Samori, B.5
-
10
-
-
84863534989
-
ATP alters the diffusion mechanics of MutS on mismatched DNA
-
Cho W.-K., Jeong C., Kim D., Chang M., Song K.-M., Hanne J., Ban C., Fishel R., Lee J.-B. ATP alters the diffusion mechanics of MutS on mismatched DNA. Structure 2012, 20:1264-1274.
-
(2012)
Structure
, vol.20
, pp. 1264-1274
-
-
Cho, W.-K.1
Jeong, C.2
Kim, D.3
Chang, M.4
Song, K.-M.5
Hanne, J.6
Ban, C.7
Fishel, R.8
Lee, J.-B.9
-
11
-
-
8344268623
-
Enhancement of ferroelectricity in strained BaTiO3 thin films
-
Choi K.J., Biegalski M., Li Y.L., Sharan A., Schubert J., Uecker R., Reiche P., Chen Y.B., Pan X.Q., Gopalan V., et al. Enhancement of ferroelectricity in strained BaTiO3 thin films. Science 2004, 306:1005-1009.
-
(2004)
Science
, vol.306
, pp. 1005-1009
-
-
Choi, K.J.1
Biegalski, M.2
Li, Y.L.3
Sharan, A.4
Schubert, J.5
Uecker, R.6
Reiche, P.7
Chen, Y.B.8
Pan, X.Q.9
Gopalan, V.10
-
12
-
-
0032073946
-
Energy dissipation in tapping-mode atomic force microscopy
-
Cleveland J., Anczykowski B., Schmid A., Elings V. Energy dissipation in tapping-mode atomic force microscopy. Appl. Phys. Lett. 1998, 72:2613.
-
(1998)
Appl. Phys. Lett.
, vol.72
, pp. 2613
-
-
Cleveland, J.1
Anczykowski, B.2
Schmid, A.3
Elings, V.4
-
13
-
-
0035894513
-
Resolution enhancement and improved data interpretation in electrostatic force microscopy
-
Colchero J., Gil A., Baró A. Resolution enhancement and improved data interpretation in electrostatic force microscopy. Phys. Rev. B 2001, 64:245403.
-
(2001)
Phys. Rev. B
, vol.64
, pp. 245403
-
-
Colchero, J.1
Gil, A.2
Baró, A.3
-
14
-
-
66749115985
-
Improving lateral resolution of electrostatic force microscopy by multifrequency method under ambient conditions
-
Ding X.D., An J., Xu J.B., Li C., Zeng R.Y. Improving lateral resolution of electrostatic force microscopy by multifrequency method under ambient conditions. Appl. Phys. Lett. 2009, 94:223109.
-
(2009)
Appl. Phys. Lett.
, vol.94
, pp. 223109
-
-
Ding, X.D.1
An, J.2
Xu, J.B.3
Li, C.4
Zeng, R.Y.5
-
15
-
-
84861373551
-
Stoichiometry of MutS and MutL at unrepaired mismatches in vivo suggests a mechanism of repair
-
Elez M., Radman M., Matic I. Stoichiometry of MutS and MutL at unrepaired mismatches in vivo suggests a mechanism of repair. Nucleic Acids Res. 2012, 40:3929-3938.
-
(2012)
Nucleic Acids Res.
, vol.40
, pp. 3929-3938
-
-
Elez, M.1
Radman, M.2
Matic, I.3
-
16
-
-
0028631162
-
DNA bending by Cro protein in specific and nonspecific complexes: implications for protein site recognition and specificity
-
Erie D.A., Yang G., Schultz H.C., Bustamante C. DNA bending by Cro protein in specific and nonspecific complexes: implications for protein site recognition and specificity. Science 1994, 266:1562-1566.
-
(1994)
Science
, vol.266
, pp. 1562-1566
-
-
Erie, D.A.1
Yang, G.2
Schultz, H.C.3
Bustamante, C.4
-
17
-
-
84887101681
-
Molecular architecture of a eukaryotic translational initiation complex
-
Fernández I.S., Bai X.C., Hussain T., Kelley A.C., Lorsch J.R., Ramakrishnan V., Scheres S.H. Molecular architecture of a eukaryotic translational initiation complex. Science 2013, 342:1240585.
-
(2013)
Science
, vol.342
, pp. 1240585
-
-
Fernández, I.S.1
Bai, X.C.2
Hussain, T.3
Kelley, A.C.4
Lorsch, J.R.5
Ramakrishnan, V.6
Scheres, S.H.7
-
18
-
-
84912016430
-
Quantitative electrostatic force microscopy with sharp silicon tips
-
Fumagalli L., Edwards M.A., Gomila G. Quantitative electrostatic force microscopy with sharp silicon tips. Nanotechnology 2014, 25:495701.
-
(2014)
Nanotechnology
, vol.25
, pp. 495701
-
-
Fumagalli, L.1
Edwards, M.A.2
Gomila, G.3
-
19
-
-
0029637281
-
Atomic resolution of the silicon (111)-(7x7) surface by atomic force microscopy
-
Giessibl F.J. Atomic resolution of the silicon (111)-(7x7) surface by atomic force microscopy. Science 1995, 267:68-71.
-
(1995)
Science
, vol.267
, pp. 68-71
-
-
Giessibl, F.J.1
-
20
-
-
0037474573
-
Amplitude or frequency modulation-detection in Kelvin probe force microscopy
-
Glatzel T. Amplitude or frequency modulation-detection in Kelvin probe force microscopy. Appl. Surf. Sci. 2003, 210:84-89.
-
(2003)
Appl. Surf. Sci.
, vol.210
, pp. 84-89
-
-
Glatzel, T.1
-
21
-
-
0033083040
-
HMSH2-hMSH6 forms a hydrolysis-independent sliding clamp on mismatched DNA
-
Gradia S., Subramanian D., Wilson T., Acharya S., Makhov A., Griffith J., Fishel R. hMSH2-hMSH6 forms a hydrolysis-independent sliding clamp on mismatched DNA. Mol. Cell 1999, 3:255-261.
-
(1999)
Mol. Cell
, vol.3
, pp. 255-261
-
-
Gradia, S.1
Subramanian, D.2
Wilson, T.3
Acharya, S.4
Makhov, A.5
Griffith, J.6
Fishel, R.7
-
22
-
-
84860523092
-
Quantifying the dielectric constant of thick insulators by electrostatic force microscopy: effects of the microscopic parts of the probe
-
Gramse G., Gomila G., Fumagalli L. Quantifying the dielectric constant of thick insulators by electrostatic force microscopy: effects of the microscopic parts of the probe. Nanotechnology 2012, 23:205703.
-
(2012)
Nanotechnology
, vol.23
, pp. 205703
-
-
Gramse, G.1
Gomila, G.2
Fumagalli, L.3
-
23
-
-
84885584591
-
Many ways to loop DNA
-
Griffith J.D. Many ways to loop DNA. J. Biol. Chem. 2013, 288:29724-29735.
-
(2013)
J. Biol. Chem.
, vol.288
, pp. 29724-29735
-
-
Griffith, J.D.1
-
24
-
-
0017869441
-
Electron microscope visualization of chromatin and other DNA-protein complexes
-
Griffith J.D., Christiansen G. Electron microscope visualization of chromatin and other DNA-protein complexes. Annu. Rev. Biophys. Bioeng. 1978, 7:19-35.
-
(1978)
Annu. Rev. Biophys. Bioeng.
, vol.7
, pp. 19-35
-
-
Griffith, J.D.1
Christiansen, G.2
-
25
-
-
0024494766
-
Isolation and characterization of the Escherichia coli mutL gene product
-
Grilley M., Welsh K.M., Su S.S., Modrich P. Isolation and characterization of the Escherichia coli mutL gene product. J. Biol. Chem. 1989, 264:1000-1004.
-
(1989)
J. Biol. Chem.
, vol.264
, pp. 1000-1004
-
-
Grilley, M.1
Welsh, K.M.2
Su, S.S.3
Modrich, P.4
-
26
-
-
84881515719
-
Using stable MutS dimers and tetramers to quantitatively analyze DNA mismatch recognition and sliding clamp formation
-
Groothuizen F.S., Fish A., Petoukhov M.V., Reumer A., Manelyte L., Winterwerp H.H., Marinus M.G., Lebbink J.H., Svergun D.I., Friedhoff P., Sixma T.K. Using stable MutS dimers and tetramers to quantitatively analyze DNA mismatch recognition and sliding clamp formation. Nucleic Acids Res. 2013, 41:8166-8181.
-
(2013)
Nucleic Acids Res.
, vol.41
, pp. 8166-8181
-
-
Groothuizen, F.S.1
Fish, A.2
Petoukhov, M.V.3
Reumer, A.4
Manelyte, L.5
Winterwerp, H.H.6
Marinus, M.G.7
Lebbink, J.H.8
Svergun, D.I.9
Friedhoff, P.10
Sixma, T.K.11
-
27
-
-
72849138482
-
Tunneling electroresistance effect in ferroelectric tunnel junctions at the nanoscale
-
Gruverman A., Wu D., Lu H., Wang Y., Jang H.W., Folkman C.M., Zhuravlev M.Y., Felker D., Rzchowski M., Eom C.B., Tsymbal E.Y. Tunneling electroresistance effect in ferroelectric tunnel junctions at the nanoscale. Nano Lett. 2009, 9:3539-3543.
-
(2009)
Nano Lett.
, vol.9
, pp. 3539-3543
-
-
Gruverman, A.1
Wu, D.2
Lu, H.3
Wang, Y.4
Jang, H.W.5
Folkman, C.M.6
Zhuravlev, M.Y.7
Felker, D.8
Rzchowski, M.9
Eom, C.B.10
Tsymbal, E.Y.11
-
28
-
-
84875613843
-
Structural visualization of key steps in human transcription initiation
-
He Y., Fang J., Taatjes D.J., Nogales E. Structural visualization of key steps in human transcription initiation. Nature 2013, 495:481-486.
-
(2013)
Nature
, vol.495
, pp. 481-486
-
-
He, Y.1
Fang, J.2
Taatjes, D.J.3
Nogales, E.4
-
29
-
-
84904170133
-
The dynamic duo: combining NMR and small angle scattering in structural biology
-
Hennig J., Sattler M. The dynamic duo: combining NMR and small angle scattering in structural biology. Protein Sci. 2014, 23:669-682.
-
(2014)
Protein Sci.
, vol.23
, pp. 669-682
-
-
Hennig, J.1
Sattler, M.2
-
30
-
-
81855189485
-
Visualization of eukaryotic DNA mismatch repair reveals distinct recognition and repair intermediates
-
Hombauer H., Campbell C.S., Smith C.E., Desai A., Kolodner R.D. Visualization of eukaryotic DNA mismatch repair reveals distinct recognition and repair intermediates. Cell 2011, 147:1040-1053.
-
(2011)
Cell
, vol.147
, pp. 1040-1053
-
-
Hombauer, H.1
Campbell, C.S.2
Smith, C.E.3
Desai, A.4
Kolodner, R.D.5
-
31
-
-
0005453373
-
Enhanced sensitivity to force gradients by using higher flexural modes of the atomic force microscope cantilever
-
Hoummady M., Farnault E. Enhanced sensitivity to force gradients by using higher flexural modes of the atomic force microscope cantilever. Applied Physics A: Materials Science & Processing 1998, 66:361-364.
-
(1998)
Applied Physics A: Materials Science & Processing
, vol.66
, pp. 361-364
-
-
Hoummady, M.1
Farnault, E.2
-
32
-
-
84880840334
-
Comprehensive macromolecular conformations mapped by quantitative SAXS analyses
-
Hura G.L., Budworth H., Dyer K.N., Rambo R.P., Hammel M., McMurray C.T., Tainer J.A. Comprehensive macromolecular conformations mapped by quantitative SAXS analyses. Nat. Methods 2013, 10:453-454.
-
(2013)
Nat. Methods
, vol.10
, pp. 453-454
-
-
Hura, G.L.1
Budworth, H.2
Dyer, K.N.3
Rambo, R.P.4
Hammel, M.5
McMurray, C.T.6
Tainer, J.A.7
-
33
-
-
84886437286
-
DNA conformations in mismatch repair probed in solution by X-ray scattering from gold nanocrystals
-
Hura G.L., Tsai C.L., Claridge S.A., Mendillo M.L., Smith J.M., Williams G.J., Mastroianni A.J., Alivisatos A.P., Putnam C.D., Kolodner R.D., Tainer J.A. DNA conformations in mismatch repair probed in solution by X-ray scattering from gold nanocrystals. Proc. Natl. Acad. Sci. USA 2013, 110:17308-17313.
-
(2013)
Proc. Natl. Acad. Sci. USA
, vol.110
, pp. 17308-17313
-
-
Hura, G.L.1
Tsai, C.L.2
Claridge, S.A.3
Mendillo, M.L.4
Smith, J.M.5
Williams, G.J.6
Mastroianni, A.J.7
Alivisatos, A.P.8
Putnam, C.D.9
Kolodner, R.D.10
Tainer, J.A.11
-
34
-
-
0346250182
-
The molecular machines of DNA repair: scanning force microscopy analysis of their architecture
-
Janićijević A., Ristic D., Wyman C. The molecular machines of DNA repair: scanning force microscopy analysis of their architecture. J. Microsc. 2003, 212:264-272.
-
(2003)
J. Microsc.
, vol.212
, pp. 264-272
-
-
Janićijević, A.1
Ristic, D.2
Wyman, C.3
-
35
-
-
79960627586
-
Atomic force microscopy captures MutS tetramers initiating DNA mismatch repair
-
Jiang Y., Marszalek P.E. Atomic force microscopy captures MutS tetramers initiating DNA mismatch repair. EMBO J. 2011, 30:2881-2893.
-
(2011)
EMBO J.
, vol.30
, pp. 2881-2893
-
-
Jiang, Y.1
Marszalek, P.E.2
-
36
-
-
0344082893
-
Fluid Electric Force Microscopy for Charge Density Mapping in Biological Systems
-
Johnson A.S., Nehl C.L., Mason M.G., Hafner J.H. Fluid Electric Force Microscopy for Charge Density Mapping in Biological Systems. Langmuir 2003, 19:10007-10010.
-
(2003)
Langmuir
, vol.19
, pp. 10007-10010
-
-
Johnson, A.S.1
Nehl, C.L.2
Mason, M.G.3
Hafner, J.H.4
-
37
-
-
0000267538
-
Vacuum compatible high-sensitive Kelvin probe force microscopy
-
Kikukawa A., Hosaka S., Imura R. Vacuum compatible high-sensitive Kelvin probe force microscopy. Rev. Sci. Instrum. 1996, 67:1463-1467.
-
(1996)
Rev. Sci. Instrum.
, vol.67
, pp. 1463-1467
-
-
Kikukawa, A.1
Hosaka, S.2
Imura, R.3
-
38
-
-
56349155070
-
Spring constant of microcantilevers in fundamental and higher eigenmodes
-
Kokavecz J., Mechler A. Spring constant of microcantilevers in fundamental and higher eigenmodes. Phys. Rev. B 2008, 78:172101.
-
(2008)
Phys. Rev. B
, vol.78
, pp. 172101
-
-
Kokavecz, J.1
Mechler, A.2
-
40
-
-
84948741378
-
Eukaryotic Mismatch Repair in Relation to DNA Replication
-
Kunkel T.A., Erie D.A. Eukaryotic Mismatch Repair in Relation to DNA Replication. Annu. Rev. Genet. 2015, 49:291-313.
-
(2015)
Annu. Rev. Genet.
, vol.49
, pp. 291-313
-
-
Kunkel, T.A.1
Erie, D.A.2
-
41
-
-
0034641947
-
The crystal structure of DNA mismatch repair protein MutS binding to a G x T mismatch
-
Lamers M.H., Perrakis A., Enzlin J.H., Winterwerp H.H., de Wind N., Sixma T.K. The crystal structure of DNA mismatch repair protein MutS binding to a G x T mismatch. Nature 2000, 407:711-717.
-
(2000)
Nature
, vol.407
, pp. 711-717
-
-
Lamers, M.H.1
Perrakis, A.2
Enzlin, J.H.3
Winterwerp, H.H.4
de Wind, N.5
Sixma, T.K.6
-
42
-
-
2642565204
-
Quantitative electrostatic force microscopy-phase measurements
-
Lei C., Das A., Elliott M., Macdonald J.E. Quantitative electrostatic force microscopy-phase measurements. Nanotechnology 2004, 15:627.
-
(2004)
Nanotechnology
, vol.15
, pp. 627
-
-
Lei, C.1
Das, A.2
Elliott, M.3
Macdonald, J.E.4
-
43
-
-
78649260205
-
Improved Kelvin probe force microscopy for imaging individual DNA molecules on insulating surfaces
-
Leung C., Maradan D., Kramer A., Howorka S., Mesquida P., Hoogenboom B.W. Improved Kelvin probe force microscopy for imaging individual DNA molecules on insulating surfaces. Appl. Phys. Lett. 2010, 97:203703.
-
(2010)
Appl. Phys. Lett.
, vol.97
, pp. 203703
-
-
Leung, C.1
Maradan, D.2
Kramer, A.3
Howorka, S.4
Mesquida, P.5
Hoogenboom, B.W.6
-
44
-
-
33847026837
-
Using atomic force microscopy to study chromatin structure and nucleosome remodeling
-
Lohr D., Bash R., Wang H., Yodh J., Lindsay S. Using atomic force microscopy to study chromatin structure and nucleosome remodeling. Methods 2007, 41:333-341.
-
(2007)
Methods
, vol.41
, pp. 333-341
-
-
Lohr, D.1
Bash, R.2
Wang, H.3
Yodh, J.4
Lindsay, S.5
-
45
-
-
1842411320
-
Crystal structure of the nucleosome core particle at 2.8 A resolution
-
Luger K., Mäder A.W., Richmond R.K., Sargent D.F., Richmond T.J. Crystal structure of the nucleosome core particle at 2.8 A resolution. Nature 1997, 389:251-260.
-
(1997)
Nature
, vol.389
, pp. 251-260
-
-
Luger, K.1
Mäder, A.W.2
Richmond, R.K.3
Sargent, D.F.4
Richmond, T.J.5
-
46
-
-
84862732690
-
New insights into nucleosome and chromatin structure: an ordered state or a disordered affair?
-
Luger K., Dechassa M.L., Tremethick D.J. New insights into nucleosome and chromatin structure: an ordered state or a disordered affair?. Nat. Rev. Mol. Cell Biol. 2012, 13:436-447.
-
(2012)
Nat. Rev. Mol. Cell Biol.
, vol.13
, pp. 436-447
-
-
Luger, K.1
Dechassa, M.L.2
Tremethick, D.J.3
-
47
-
-
77951819090
-
Stochastic and reversible assembly of a multiprotein DNA repair complex ensures accurate target site recognition and efficient repair
-
Luijsterburg M.S., von Bornstaedt G., Gourdin A.M., Politi A.Z., Moné M.J., Warmerdam D.O., Goedhart J., Vermeulen W., van Driel R., Höfer T. Stochastic and reversible assembly of a multiprotein DNA repair complex ensures accurate target site recognition and efficient repair. J. Cell Biol. 2010, 189:445-463.
-
(2010)
J. Cell Biol.
, vol.189
, pp. 445-463
-
-
Luijsterburg, M.S.1
von Bornstaedt, G.2
Gourdin, A.M.3
Politi, A.Z.4
Moné, M.J.5
Warmerdam, D.O.6
Goedhart, J.7
Vermeulen, W.8
van Driel, R.9
Höfer, T.10
-
48
-
-
84900335723
-
Nanoscale Nucleosome Dynamics Assessed with Time-lapse AFM
-
Lyubchenko Y.L. Nanoscale Nucleosome Dynamics Assessed with Time-lapse AFM. Biophys. Rev. 2014, 6:181-190.
-
(2014)
Biophys. Rev.
, vol.6
, pp. 181-190
-
-
Lyubchenko, Y.L.1
-
49
-
-
0035235288
-
Atomic force microscopy of DNA and protein-DNA complexes using functionalized mica substrates
-
Lyubchenko Y.L., Gall A.A., Shlyakhtenko L.S. Atomic force microscopy of DNA and protein-DNA complexes using functionalized mica substrates. Methods Mol. Biol. 2001, 148:569-578.
-
(2001)
Methods Mol. Biol.
, vol.148
, pp. 569-578
-
-
Lyubchenko, Y.L.1
Gall, A.A.2
Shlyakhtenko, L.S.3
-
50
-
-
84903181318
-
The palindromic DNA-bound USP/EcR nuclear receptor adopts an asymmetric organization with allosteric domain positioning
-
Maletta M., Orlov I., Roblin P., Beck Y., Moras D., Billas I.M., Klaholz B.P. The palindromic DNA-bound USP/EcR nuclear receptor adopts an asymmetric organization with allosteric domain positioning. Nat. Commun. 2014, 5:4139.
-
(2014)
Nat. Commun.
, vol.5
, pp. 4139
-
-
Maletta, M.1
Orlov, I.2
Roblin, P.3
Beck, Y.4
Moras, D.5
Billas, I.M.6
Klaholz, B.P.7
-
51
-
-
33750306098
-
Atomic force microscope-force mapping and profiling on a sub 100-Å scale
-
Martin Y., Williams C.C., Wickramasinghe H.K. Atomic force microscope-force mapping and profiling on a sub 100-Å scale. J. Appl. Physiol. 1987, 61:4723-4729.
-
(1987)
J. Appl. Physiol.
, vol.61
, pp. 4723-4729
-
-
Martin, Y.1
Williams, C.C.2
Wickramasinghe, H.K.3
-
52
-
-
33644983240
-
Measuring phase shifts and energy dissipation with amplitude modulation atomic force microscopy
-
Martínez N.F., García R. Measuring phase shifts and energy dissipation with amplitude modulation atomic force microscopy. Nanotechnology 2006, 17:S167-S172.
-
(2006)
Nanotechnology
, vol.17
, pp. S167-S172
-
-
Martínez, N.F.1
García, R.2
-
53
-
-
51349160561
-
Bimodal atomic force microscopy imaging of isolated antibodies in air and liquids
-
Martínez N.F., Lozano J.R., Herruzo E.T., Garcia F., Richter C., Sulzbach T., Garcia R. Bimodal atomic force microscopy imaging of isolated antibodies in air and liquids. Nanotechnology 2008, 19:384011.
-
(2008)
Nanotechnology
, vol.19
, pp. 384011
-
-
Martínez, N.F.1
Lozano, J.R.2
Herruzo, E.T.3
Garcia, F.4
Richter, C.5
Sulzbach, T.6
Garcia, R.7
-
54
-
-
78649522892
-
Kelvin probe force microscopy and its application
-
Melitz W., Shen J., Kummel A.C., Lee S. Kelvin probe force microscopy and its application. Surf. Sci. Rep. 2011, 66:1-27.
-
(2011)
Surf. Sci. Rep.
, vol.66
, pp. 1-27
-
-
Melitz, W.1
Shen, J.2
Kummel, A.C.3
Lee, S.4
-
55
-
-
34447255483
-
Escherichia coli MutS tetramerization domain structure reveals that stable dimers but not tetramers are essential for DNA mismatch repair in vivo
-
Mendillo M.L., Putnam C.D., Kolodner R.D. Escherichia coli MutS tetramerization domain structure reveals that stable dimers but not tetramers are essential for DNA mismatch repair in vivo. J. Biol. Chem. 2007, 282:16345-16354.
-
(2007)
J. Biol. Chem.
, vol.282
, pp. 16345-16354
-
-
Mendillo, M.L.1
Putnam, C.D.2
Kolodner, R.D.3
-
56
-
-
65149101444
-
Electrostatic force microscopy: imaging DNA and protein polarizations one by one
-
Mikamo-Satoh E., Yamada F., Takagi A., Matsumoto T., Kawai T. Electrostatic force microscopy: imaging DNA and protein polarizations one by one. Nanotechnology 2009, 20:145102.
-
(2009)
Nanotechnology
, vol.20
, pp. 145102
-
-
Mikamo-Satoh, E.1
Yamada, F.2
Takagi, A.3
Matsumoto, T.4
Kawai, T.5
-
57
-
-
25444480278
-
Open clamp structure in the clamp-loading complex visualized by electron microscopic image analysis
-
Miyata T., Suzuki H., Oyama T., Mayanagi K., Ishino Y., Morikawa K. Open clamp structure in the clamp-loading complex visualized by electron microscopic image analysis. Proc. Natl. Acad. Sci. USA 2005, 102:13795-13800.
-
(2005)
Proc. Natl. Acad. Sci. USA
, vol.102
, pp. 13795-13800
-
-
Miyata, T.1
Suzuki, H.2
Oyama, T.3
Mayanagi, K.4
Ishino, Y.5
Morikawa, K.6
-
58
-
-
24944540931
-
Mesoscale conformational changes in the DNA-repair complex Rad50/Mre11/Nbs1 upon binding DNA
-
Moreno-Herrero F., de Jager M., Dekker N.H., Kanaar R., Wyman C., Dekker C. Mesoscale conformational changes in the DNA-repair complex Rad50/Mre11/Nbs1 upon binding DNA. Nature 2005, 437:440-443.
-
(2005)
Nature
, vol.437
, pp. 440-443
-
-
Moreno-Herrero, F.1
de Jager, M.2
Dekker, N.H.3
Kanaar, R.4
Wyman, C.5
Dekker, C.6
-
60
-
-
0034641938
-
Crystal structures of mismatch repair protein MutS and its complex with a substrate DNA
-
Obmolova G., Ban C., Hsieh P., Yang W. Crystal structures of mismatch repair protein MutS and its complex with a substrate DNA. Nature 2000, 407:703-710.
-
(2000)
Nature
, vol.407
, pp. 703-710
-
-
Obmolova, G.1
Ban, C.2
Hsieh, P.3
Yang, W.4
-
61
-
-
77957292751
-
Methods for three-dimensional reconstruction of heterogeneous assemblies
-
Orlova E.V., Saibil H.R. Methods for three-dimensional reconstruction of heterogeneous assemblies. Methods Enzymol. 2010, 482:321-341.
-
(2010)
Methods Enzymol.
, vol.482
, pp. 321-341
-
-
Orlova, E.V.1
Saibil, H.R.2
-
62
-
-
84861859587
-
Large conformational changes in MutS during DNA scanning, mismatch recognition and repair signalling
-
Qiu R., DeRocco V.C., Harris C., Sharma A., Hingorani M.M., Erie D.A., Weninger K.R. Large conformational changes in MutS during DNA scanning, mismatch recognition and repair signalling. EMBO J. 2012, 31:2528-2540.
-
(2012)
EMBO J.
, vol.31
, pp. 2528-2540
-
-
Qiu, R.1
DeRocco, V.C.2
Harris, C.3
Sharma, A.4
Hingorani, M.M.5
Erie, D.A.6
Weninger, K.R.7
-
63
-
-
0034814802
-
A novel single-molecule study to determine protein--protein association constants
-
Ratcliff G.C., Erie D.A. A novel single-molecule study to determine protein--protein association constants. J. Am. Chem. Soc. 2001, 123:5632-5635.
-
(2001)
J. Am. Chem. Soc.
, vol.123
, pp. 5632-5635
-
-
Ratcliff, G.C.1
Erie, D.A.2
-
64
-
-
27644509290
-
Atomic and Kelvin force microscopy applied on hydrogenated diamond surfaces
-
Rezek B. Atomic and Kelvin force microscopy applied on hydrogenated diamond surfaces. New Diam Front C Tech 2005, 15:275-295.
-
(2005)
New Diam Front C Tech
, vol.15
, pp. 275-295
-
-
Rezek, B.1
-
65
-
-
2642571726
-
Compositional mapping of surfaces in atomic force microscopy by excitation of the second normal mode of the microcantilever
-
Rodríguez T.R., García R. Compositional mapping of surfaces in atomic force microscopy by excitation of the second normal mode of the microcantilever. Appl. Phys. Lett. 2004, 84:449.
-
(2004)
Appl. Phys. Lett.
, vol.84
, pp. 449
-
-
Rodríguez, T.R.1
García, R.2
-
66
-
-
84879969009
-
Combined optical and topographic imaging reveals different arrangements of human RAD54 with presynaptic and postsynaptic RAD51-DNA filaments
-
Sanchez H., Kertokalio A., van Rossum-Fikkert S., Kanaar R., Wyman C. Combined optical and topographic imaging reveals different arrangements of human RAD54 with presynaptic and postsynaptic RAD51-DNA filaments. Proc. Natl. Acad. Sci. USA 2013, 110:11385-11390.
-
(2013)
Proc. Natl. Acad. Sci. USA
, vol.110
, pp. 11385-11390
-
-
Sanchez, H.1
Kertokalio, A.2
van Rossum-Fikkert, S.3
Kanaar, R.4
Wyman, C.5
-
67
-
-
0035958857
-
Interaction of Escherichia coli MutS and MutL at a DNA mismatch
-
Schofield M.J., Nayak S., Scott T.H., Du C., Hsieh P. Interaction of Escherichia coli MutS and MutL at a DNA mismatch. J. Biol. Chem. 2001, 276:28291-28299.
-
(2001)
J. Biol. Chem.
, vol.276
, pp. 28291-28299
-
-
Schofield, M.J.1
Nayak, S.2
Scott, T.H.3
Du, C.4
Hsieh, P.5
-
68
-
-
0001173529
-
Tapping-mode atomic force microscopy and phase-imaging in higher eigenmodes
-
Stark R.W., Drobek T., Heckl W.M. Tapping-mode atomic force microscopy and phase-imaging in higher eigenmodes. Appl. Phys. Lett. 1999, 74:3296-3298.
-
(1999)
Appl. Phys. Lett.
, vol.74
, pp. 3296-3298
-
-
Stark, R.W.1
Drobek, T.2
Heckl, W.M.3
-
69
-
-
33947539451
-
Multifrequency electrostatic force microscopy in the repulsive regime
-
Stark R.W., Naujoks N., Stemmer A. Multifrequency electrostatic force microscopy in the repulsive regime. Nanotechnology 2007, 18:065502.
-
(2007)
Nanotechnology
, vol.18
, pp. 065502
-
-
Stark, R.W.1
Naujoks, N.2
Stemmer, A.3
-
70
-
-
84907320786
-
Solution-state conformation and stoichiometry of yeast Sir3 heterochromatin fibres
-
Swygert S.G., Manning B.J., Senapati S., Kaur P., Lindsay S., Demeler B., Peterson C.L. Solution-state conformation and stoichiometry of yeast Sir3 heterochromatin fibres. Nat. Commun. 2014, 5:4751.
-
(2014)
Nat. Commun.
, vol.5
, pp. 4751
-
-
Swygert, S.G.1
Manning, B.J.2
Senapati, S.3
Kaur, P.4
Lindsay, S.5
Demeler, B.6
Peterson, C.L.7
-
71
-
-
13744251078
-
Study of the noise of micromechanical oscillators under quality factor enhancement via driving force control
-
Tamayo J. Study of the noise of micromechanical oscillators under quality factor enhancement via driving force control. J. Appl. Physiol. 2005, 97:044903.
-
(2005)
J. Appl. Physiol.
, vol.97
, pp. 044903
-
-
Tamayo, J.1
-
72
-
-
61349195257
-
Mechanism of MutS searching for DNA mismatches and signaling repair
-
Tessmer I., Yang Y., Zhai J., Du C., Hsieh P., Hingorani M.M., Erie D.A. Mechanism of MutS searching for DNA mismatches and signaling repair. J. Biol. Chem. 2008, 283:36646-36654.
-
(2008)
J. Biol. Chem.
, vol.283
, pp. 36646-36654
-
-
Tessmer, I.1
Yang, Y.2
Zhai, J.3
Du, C.4
Hsieh, P.5
Hingorani, M.M.6
Erie, D.A.7
-
73
-
-
84875132314
-
Subsurface imaging of carbon nanotube networks in polymers with DC-biased multifrequency dynamic atomic force microscopy
-
Thompson H.T., Barroso-Bujans F., Herrero J.G., Reifenberger R., Raman A. Subsurface imaging of carbon nanotube networks in polymers with DC-biased multifrequency dynamic atomic force microscopy. Nanotechnology 2013, 24:135701.
-
(2013)
Nanotechnology
, vol.24
, pp. 135701
-
-
Thompson, H.T.1
Barroso-Bujans, F.2
Herrero, J.G.3
Reifenberger, R.4
Raman, A.5
-
74
-
-
84862954232
-
Computational reconstruction of multidomain proteins using atomic force microscopy data
-
Trinh M.H., Odorico M., Pique M.E., Teulon J.M., Roberts V.A., Ten Eyck L.F., Getzoff E.D., Parot P., Chen S.W., Pellequer J.L. Computational reconstruction of multidomain proteins using atomic force microscopy data. Structure 2012, 20:113-120.
-
(2012)
Structure
, vol.20
, pp. 113-120
-
-
Trinh, M.H.1
Odorico, M.2
Pique, M.E.3
Teulon, J.M.4
Roberts, V.A.5
Ten Eyck, L.F.6
Getzoff, E.D.7
Parot, P.8
Chen, S.W.9
Pellequer, J.L.10
-
75
-
-
29144531935
-
Ferroelectric properties of epitaxial BaTiO3 thin films and heterostructures on different substrates
-
Trithaveesak O., Schubert J., Buchal C. Ferroelectric properties of epitaxial BaTiO3 thin films and heterostructures on different substrates. J. Appl. Physiol. 2005, 98:114101.
-
(2005)
J. Appl. Physiol.
, vol.98
, pp. 114101
-
-
Trithaveesak, O.1
Schubert, J.2
Buchal, C.3
-
76
-
-
84902178992
-
CryoEM and image sorting for flexible protein/DNA complexes
-
Villarreal S.A., Stewart P.L. CryoEM and image sorting for flexible protein/DNA complexes. J. Struct. Biol. 2014, 187:76-83.
-
(2014)
J. Struct. Biol.
, vol.187
, pp. 76-83
-
-
Villarreal, S.A.1
Stewart, P.L.2
-
77
-
-
0036931098
-
Glutaraldehyde modified mica: a new surface for atomic force microscopy of chromatin
-
Wang H., Bash R., Yodh J.G., Hager G.L., Lohr D., Lindsay S.M. Glutaraldehyde modified mica: a new surface for atomic force microscopy of chromatin. Biophys. J. 2002, 83:3619-3625.
-
(2002)
Biophys. J.
, vol.83
, pp. 3619-3625
-
-
Wang, H.1
Bash, R.2
Yodh, J.G.3
Hager, G.L.4
Lohr, D.5
Lindsay, S.M.6
-
78
-
-
10744232659
-
DNA bending and unbending by MutS govern mismatch recognition and specificity
-
Wang H., Yang Y., Schofield M.J., Du C., Fridman Y., Lee S.D., Larson E.D., Drummond J.T., Alani E., Hsieh P., Erie D.A. DNA bending and unbending by MutS govern mismatch recognition and specificity. Proc. Natl. Acad. Sci. USA 2003, 100:14822-14827.
-
(2003)
Proc. Natl. Acad. Sci. USA
, vol.100
, pp. 14822-14827
-
-
Wang, H.1
Yang, Y.2
Schofield, M.J.3
Du, C.4
Fridman, Y.5
Lee, S.D.6
Larson, E.D.7
Drummond, J.T.8
Alani, E.9
Hsieh, P.10
Erie, D.A.11
-
79
-
-
46249106053
-
Scanning electron microscopy of chromosomes
-
Wanner G., Schroeder-Reiter E. Scanning electron microscopy of chromosomes. Methods Cell Biol. 2008, 88:451-474.
-
(2008)
Methods Cell Biol.
, vol.88
, pp. 451-474
-
-
Wanner, G.1
Schroeder-Reiter, E.2
-
80
-
-
34248572591
-
Structure of the human MutSalpha DNA lesion recognition complex
-
Warren J.J., Pohlhaus T.J., Changela A., Iyer R.R., Modrich P.L., Beese L.S. Structure of the human MutSalpha DNA lesion recognition complex. Mol. Cell 2007, 26:579-592.
-
(2007)
Mol. Cell
, vol.26
, pp. 579-592
-
-
Warren, J.J.1
Pohlhaus, T.J.2
Changela, A.3
Iyer, R.R.4
Modrich, P.L.5
Beese, L.S.6
-
81
-
-
84900404387
-
Structural insights into NHEJ: building up an integrated picture of the dynamic DSB repair super complex, one component and interaction at a time
-
Williams G.J., Hammel M., Radhakrishnan S.K., Ramsden D., Lees-Miller S.P., Tainer J.A. Structural insights into NHEJ: building up an integrated picture of the dynamic DSB repair super complex, one component and interaction at a time. DNA Repair (Amst.) 2014, 17:110-120.
-
(2014)
DNA Repair (Amst.)
, vol.17
, pp. 110-120
-
-
Williams, G.J.1
Hammel, M.2
Radhakrishnan, S.K.3
Ramsden, D.4
Lees-Miller, S.P.5
Tainer, J.A.6
-
82
-
-
0028543569
-
Role of linker histones in extended chromatin fibre structure
-
Yang G., Leuba S.H., Bustamante C., Zlatanova J., van Holde K. Role of linker histones in extended chromatin fibre structure. Nat. Struct. Biol. 1994, 1:761-763.
-
(1994)
Nat. Struct. Biol.
, vol.1
, pp. 761-763
-
-
Yang, G.1
Leuba, S.H.2
Bustamante, C.3
Zlatanova, J.4
van Holde, K.5
-
83
-
-
0037328523
-
Quantitative characterization of biomolecular assemblies and interactions using atomic force microscopy
-
Yang Y., Wang H., Erie D.A. Quantitative characterization of biomolecular assemblies and interactions using atomic force microscopy. Methods 2003, 29:175-187.
-
(2003)
Methods
, vol.29
, pp. 175-187
-
-
Yang, Y.1
Wang, H.2
Erie, D.A.3
-
84
-
-
84867376482
-
Damaged DNA induced UV-damaged DNA-binding protein (UV-DDB) dimerization and its roles in chromatinized DNA repair
-
Yeh J.I., Levine A.S., Du S., Chinte U., Ghodke H., Wang H., Shi H., Hsieh C.L., Conway J.F., Van Houten B., Rapić-Otrin V. Damaged DNA induced UV-damaged DNA-binding protein (UV-DDB) dimerization and its roles in chromatinized DNA repair. Proc. Natl. Acad. Sci. USA 2012, 109:E2737-E2746.
-
(2012)
Proc. Natl. Acad. Sci. USA
, vol.109
, pp. E2737-E2746
-
-
Yeh, J.I.1
Levine, A.S.2
Du, S.3
Chinte, U.4
Ghodke, H.5
Wang, H.6
Shi, H.7
Hsieh, C.L.8
Conway, J.F.9
Van Houten, B.10
Rapić-Otrin, V.11
-
85
-
-
34248192442
-
Compensating electrostatic forces by single-scan Kelvin probe force microscopy
-
Ziegler D., Rychen J., Naujoks N., Stemmer A. Compensating electrostatic forces by single-scan Kelvin probe force microscopy. Nanotechnology 2007, 18:225505.
-
(2007)
Nanotechnology
, vol.18
, pp. 225505
-
-
Ziegler, D.1
Rychen, J.2
Naujoks, N.3
Stemmer, A.4
-
86
-
-
0037823505
-
Chromatin fibers, one-at-a-time
-
Zlatanova J., Leuba S.H. Chromatin fibers, one-at-a-time. J. Mol. Biol. 2003, 331:1-19.
-
(2003)
J. Mol. Biol.
, vol.331
, pp. 1-19
-
-
Zlatanova, J.1
Leuba, S.H.2
-
87
-
-
0028286015
-
Linker DNA accessibility in chromatin fibers of different conformations: a reevaluation
-
Zlatanova J., Leuba S.H., Yang G., Bustamante C., van Holde K. Linker DNA accessibility in chromatin fibers of different conformations: a reevaluation. Proc. Natl. Acad. Sci. USA 1994, 91:5277-5280.
-
(1994)
Proc. Natl. Acad. Sci. USA
, vol.91
, pp. 5277-5280
-
-
Zlatanova, J.1
Leuba, S.H.2
Yang, G.3
Bustamante, C.4
van Holde, K.5
|