-
1
-
-
84872038659
-
Transposable elements domesticated and neofunctionalized by eukaryotic genomes
-
COI: 1:CAS:528:DC%2BC38XhtlKjsrnP, PID: 22960324
-
Alzohairy AM, Gyulai G, Jansen RK, Bahieldin A (2013) Transposable elements domesticated and neofunctionalized by eukaryotic genomes. Plasmid 69:1–15
-
(2013)
Plasmid
, vol.69
, pp. 1-15
-
-
Alzohairy, A.M.1
Gyulai, G.2
Jansen, R.K.3
Bahieldin, A.4
-
2
-
-
84878437562
-
Non-coding RNAs in homeostasis, disease and stress responses: an evolutionary perspective
-
COI: 1:CAS:528:DC%2BC3sXos12hurk%3D, PID: 23709461
-
Amaral PP, Dinger ME, Mattick JS (2013) Non-coding RNAs in homeostasis, disease and stress responses: an evolutionary perspective. Brief Funct Genomics 12:254–278
-
(2013)
Brief Funct Genomics
, vol.12
, pp. 254-278
-
-
Amaral, P.P.1
Dinger, M.E.2
Mattick, J.S.3
-
3
-
-
36549053175
-
A genomic view of introgression and hybrid speciation
-
COI: 1:CAS:528:DC%2BD2sXhsVWisbzI, PID: 17933508
-
Baack EJ, Rieseberg LH (2007) A genomic view of introgression and hybrid speciation. Curr Opin Genet Dev 17:513–518
-
(2007)
Curr Opin Genet Dev
, vol.17
, pp. 513-518
-
-
Baack, E.J.1
Rieseberg, L.H.2
-
4
-
-
84879355401
-
A new exon derived from a mammalian apparent LTR retrotransposon of the SUPT16H gene
-
PID: 23671841
-
Bae MI, Kim YJ, Lee JR, Jung YD, Kim HS (2013) A new exon derived from a mammalian apparent LTR retrotransposon of the SUPT16H gene. Int J Genomics 2013:387594
-
(2013)
Int J Genomics
, vol.2013
, pp. 387594
-
-
Bae, M.I.1
Kim, Y.J.2
Lee, J.R.3
Jung, Y.D.4
Kim, H.S.5
-
5
-
-
33847029992
-
Null mutations in the filaggrin gene (FLG) determine major susceptibility to early-onset atopic dermatitis that persists into adulthood
-
COI: 1:CAS:528:DC%2BD2sXhs1Crtr0%3D, PID: 16990802
-
Barker JN, Palmer CN, Zhao Y et al (2007) Null mutations in the filaggrin gene (FLG) determine major susceptibility to early-onset atopic dermatitis that persists into adulthood. J Invest Dermatol 127:564–567
-
(2007)
J Invest Dermatol
, vol.127
, pp. 564-567
-
-
Barker, J.N.1
Palmer, C.N.2
Zhao, Y.3
-
6
-
-
0347444723
-
MicroRNAs: genomics, biogenesis, mechanism, and function
-
COI: 1:CAS:528:DC%2BD2cXhtVals7o%3D, PID: 14744438
-
Bartel DP (2004) MicroRNAs: genomics, biogenesis, mechanism, and function. Cell 116:281–297
-
(2004)
Cell
, vol.116
, pp. 281-297
-
-
Bartel, D.P.1
-
7
-
-
39749182717
-
The impact of multiple splice sites in human L1 elements
-
COI: 1:CAS:528:DC%2BD1cXis1aksbo%3D, PID: 18261861
-
Belancio VP, Roy-Engel AM, Deininger P (2008) The impact of multiple splice sites in human L1 elements. Gene 411:38–45
-
(2008)
Gene
, vol.411
, pp. 38-45
-
-
Belancio, V.P.1
Roy-Engel, A.M.2
Deininger, P.3
-
8
-
-
0030813619
-
Identification of a placental enhancer for the human leptin gene
-
COI: 1:CAS:528:DyaK2sXnslGgsb8%3D, PID: 9374555
-
Bi S, Gavrilova O, Gong DW, Mason MM, Reitman M (1997) Identification of a placental enhancer for the human leptin gene. J Biol Chem 272:30583–30588
-
(1997)
J Biol Chem
, vol.272
, pp. 30583-30588
-
-
Bi, S.1
Gavrilova, O.2
Gong, D.W.3
Mason, M.M.4
Reitman, M.5
-
9
-
-
0037379495
-
Placenta-specific INSL4 expression is mediated by a human endogenous retrovirus element
-
PID: 12606452
-
Bièche I, Laurent A, Laurendeau I et al (2003) Placenta-specific INSL4 expression is mediated by a human endogenous retrovirus element. Biol Reprod 68:1422–1429
-
(2003)
Biol Reprod
, vol.68
, pp. 1422-1429
-
-
Bièche, I.1
Laurent, A.2
Laurendeau, I.3
-
10
-
-
0020317050
-
The molecular basis of P-M hybrid dysgenesis: the role of the P element, a P-strain-specific transposon family
-
COI: 1:CAS:528:DyaL38XltVCqsLk%3D, PID: 6295641
-
Bingham PM, Kidwell MG, Rubin GM (1982) The molecular basis of P-M hybrid dysgenesis: the role of the P element, a P-strain-specific transposon family. Cell 29:995–1004
-
(1982)
Cell
, vol.29
, pp. 995-1004
-
-
Bingham, P.M.1
Kidwell, M.G.2
Rubin, G.M.3
-
11
-
-
0242300065
-
Genomewide screening for fusogenic human endogenous retrovirus envelopes identifies syncytin 2, a gene conserved on primate evolution
-
COI: 1:CAS:528:DC%2BD3sXoslKms70%3D, PID: 14557543
-
Blaise S, de Parseval N, Bénit L, Heidmann T (2003) Genomewide screening for fusogenic human endogenous retrovirus envelopes identifies syncytin 2, a gene conserved on primate evolution. Proc Natl Acad Sci U S A 100:13013–13018
-
(2003)
Proc Natl Acad Sci U S A
, vol.100
, pp. 13013-13018
-
-
Blaise, S.1
de Parseval, N.2
Bénit, L.3
Heidmann, T.4
-
12
-
-
84865420717
-
Accumulation and rapid decay of non-LTR retrotransposons in the genome of the three-spine stickleback
-
PID: 22534163
-
Blass E, Bell M, Boissinot S (2012) Accumulation and rapid decay of non-LTR retrotransposons in the genome of the three-spine stickleback. Genome Biol Evol 4:687–702
-
(2012)
Genome Biol Evol
, vol.4
, pp. 687-702
-
-
Blass, E.1
Bell, M.2
Boissinot, S.3
-
13
-
-
39749165104
-
Transposable elements as drivers of genomic and biological diversity in vertebrates
-
PID: 18293113
-
Böhne A, Brunet F, Galiana-Arnoux D, Schultheis C, Volff JN (2008) Transposable elements as drivers of genomic and biological diversity in vertebrates. Chromosome Res 16:203–215
-
(2008)
Chromosome Res
, vol.16
, pp. 203-215
-
-
Böhne, A.1
Brunet, F.2
Galiana-Arnoux, D.3
Schultheis, C.4
Volff, J.N.5
-
14
-
-
83455168092
-
Comprehensive analysis of microRNA genomic loci identifies pervasive repetitive-element origins
-
Borchert GM, Holton NW, Williams JD et al (2011) Comprehensive analysis of microRNA genomic loci identifies pervasive repetitive-element origins. Mob Genet Elem 1:8–17
-
(2011)
Mob Genet Elem
, vol.1
, pp. 8-17
-
-
Borchert, G.M.1
Holton, N.W.2
Williams, J.D.3
-
15
-
-
71749094924
-
Transposable elements in gene regulation and in the evolution of vertebrate genomes
-
COI: 1:CAS:528:DC%2BD1MXhsV2gsrbK, PID: 19914058
-
Bourque G (2009) Transposable elements in gene regulation and in the evolution of vertebrate genomes. Curr Opin Genet Dev 19:607–612
-
(2009)
Curr Opin Genet Dev
, vol.19
, pp. 607-612
-
-
Bourque, G.1
-
16
-
-
55549117831
-
Evolution of the mammalian transcription factor binding repertoire via transposable elements
-
COI: 1:CAS:528:DC%2BD1cXhtlKhsr3O, PID: 18682548
-
Bourque G, Leong B, Vega VB et al (2008) Evolution of the mammalian transcription factor binding repertoire via transposable elements. Genome Res 18:1752–1762
-
(2008)
Genome Res
, vol.18
, pp. 1752-1762
-
-
Bourque, G.1
Leong, B.2
Vega, V.B.3
-
17
-
-
13444257816
-
Transposable elements as a source of genetic innovation: expression and evolution of a family of retrotransposon-derived neogenes in mammals
-
COI: 1:CAS:528:DC%2BD2MXhtFejsbk%3D, PID: 15716091
-
Brandt J, Schrauth S, Veith AM et al (2005) Transposable elements as a source of genetic innovation: expression and evolution of a family of retrotransposon-derived neogenes in mammals. Gene 345:101–111
-
(2005)
Gene
, vol.345
, pp. 101-111
-
-
Brandt, J.1
Schrauth, S.2
Veith, A.M.3
-
18
-
-
84907867272
-
The genomic substrate for adaptive radiation in African cichlid fish
-
COI: 1:CAS:528:DC%2BC2cXhsFOlu7bM, PID: 25186727
-
Brawand D, Wagner CE, Li YI et al (2014) The genomic substrate for adaptive radiation in African cichlid fish. Nature 513:375–381
-
(2014)
Nature
, vol.513
, pp. 375-381
-
-
Brawand, D.1
Wagner, C.E.2
Li, Y.I.3
-
19
-
-
0015070886
-
Repetitive and non-repetitive DNA sequences and a speculation on the origins of evolutionary novelty
-
COI: 1:STN:280:DyaE387hsFSqsw%3D%3D, PID: 5160087
-
Britten RJ, Davidson EH (1971) Repetitive and non-repetitive DNA sequences and a speculation on the origins of evolutionary novelty. Q Rev Biol 46:111–138
-
(1971)
Q Rev Biol
, vol.46
, pp. 111-138
-
-
Britten, R.J.1
Davidson, E.H.2
-
20
-
-
0036948420
-
Allosteric cascade of spliceosome activation
-
COI: 1:CAS:528:DC%2BD3sXjslekug%3D%3D, PID: 12429696
-
Brow DA (2002) Allosteric cascade of spliceosome activation. Annu Rev Genet 36:333–360
-
(2002)
Annu Rev Genet
, vol.36
, pp. 333-360
-
-
Brow, D.A.1
-
21
-
-
33750151691
-
Computational characterization of multiple Gag-like human proteins
-
COI: 1:CAS:528:DC%2BD28XhtFeqtLvE, PID: 16979784
-
Campillos M, Doerks T, Shah PK, Bork P (2006) Computational characterization of multiple Gag-like human proteins. Trends Genet 22:585–589
-
(2006)
Trends Genet
, vol.22
, pp. 585-589
-
-
Campillos, M.1
Doerks, T.2
Shah, P.K.3
Bork, P.4
-
22
-
-
40849098032
-
Loss of LINE-1 activity in the megabats
-
COI: 1:CAS:528:DC%2BD1cXhs12ltrw%3D, PID: 18202382
-
Cantrell MA, Scott L, Brown CJ, Martinez AR, Wichman HA (2008) Loss of LINE-1 activity in the megabats. Genetics 178:393–404
-
(2008)
Genetics
, vol.178
, pp. 393-404
-
-
Cantrell, M.A.1
Scott, L.2
Brown, C.J.3
Martinez, A.R.4
Wichman, H.A.5
-
23
-
-
84859466218
-
Mutation in a primate-conserved retrotransposon reveals a noncoding RNA as a mediator of infantile encephalopathy
-
COI: 1:CAS:528:DC%2BC38Xlt1agtbc%3D, PID: 22411793
-
Cartault F, Munier P, Benko E et al (2012) Mutation in a primate-conserved retrotransposon reveals a noncoding RNA as a mediator of infantile encephalopathy. Proc Natl Acad Sci U S A 109:4980–4985
-
(2012)
Proc Natl Acad Sci U S A
, vol.109
, pp. 4980-4985
-
-
Cartault, F.1
Munier, P.2
Benko, E.3
-
24
-
-
38349103460
-
Convergent domestication of pogo-like transposases into centromere-binding proteins in fission yeast and mammals
-
COI: 1:CAS:528:DC%2BD1cXit12jsLw%3D, PID: 17940212
-
Casola C, Hucks D, Feschotte C (2008) Convergent domestication of pogo-like transposases into centromere-binding proteins in fission yeast and mammals. Mol Biol Evol 25:29–41
-
(2008)
Mol Biol Evol
, vol.25
, pp. 29-41
-
-
Casola, C.1
Hucks, D.2
Feschotte, C.3
-
25
-
-
84885788740
-
Genetic innovation in vertebrates: gypsy integrase genes and other genes derived from transposable elements
-
PID: 22928150
-
Chalopin D, Galiana D, Volff JN (2012) Genetic innovation in vertebrates: gypsy integrase genes and other genes derived from transposable elements. Int J Evol Biol 2012:724519
-
(2012)
Int J Evol Biol
, vol.2012
, pp. 724519
-
-
Chalopin, D.1
Galiana, D.2
Volff, J.N.3
-
26
-
-
84928236059
-
Comparative analysis of transposable elements highlights mobilome diversity and evolution in vertebrates
-
COI: 1:CAS:528:DC%2BC2MXkvV2rtL4%3D, PID: 25577199
-
Chalopin D, Naville M, Plard F, Galiana D, Volff JN (2015) Comparative analysis of transposable elements highlights mobilome diversity and evolution in vertebrates. Genome Biol Evol 7:567–580
-
(2015)
Genome Biol Evol
, vol.7
, pp. 567-580
-
-
Chalopin, D.1
Naville, M.2
Plard, F.3
Galiana, D.4
Volff, J.N.5
-
27
-
-
51349160670
-
Transcriptomic and genomic evolution under constant cold in Antarctic notothenioid fish
-
COI: 1:CAS:528:DC%2BD1cXhtFSjsbjM, PID: 18753634
-
Chen Z, Cheng CH, Zhang J et al (2008) Transcriptomic and genomic evolution under constant cold in Antarctic notothenioid fish. Proc Natl Acad Sci U S A 105:12944–12949
-
(2008)
Proc Natl Acad Sci U S A
, vol.105
, pp. 12944-12949
-
-
Chen, Z.1
Cheng, C.H.2
Zhang, J.3
-
28
-
-
58449095204
-
Using Alu elements as polyadenylation sites: a case of retroposon exaptation
-
COI: 1:CAS:528:DC%2BD1MXntVeqtA%3D%3D, PID: 18984903
-
Chen C, Ara T, Gautheret D (2009) Using Alu elements as polyadenylation sites: a case of retroposon exaptation. Mol Biol Evol 26:327–334
-
(2009)
Mol Biol Evol
, vol.26
, pp. 327-334
-
-
Chen, C.1
Ara, T.2
Gautheret, D.3
-
29
-
-
1542563409
-
Initial sequencing and comparative analysis of the mouse genome
-
PID: 12466850
-
Chinwalla AT, Cook LL, Delehaunty KD et al (2002) Initial sequencing and comparative analysis of the mouse genome. Nature 420:520–562
-
(2002)
Nature
, vol.420
, pp. 520-562
-
-
Chinwalla, A.T.1
Cook, L.L.2
Delehaunty, K.D.3
-
30
-
-
55549130502
-
Evidence that SIZN1 is a candidate X-linked mental retardation gene
-
COI: 1:CAS:528:DC%2BD1MXitVWgtb4%3D, PID: 18798319
-
Cho G, Bhat SS, Gao J et al (2008a) Evidence that SIZN1 is a candidate X-linked mental retardation gene. Am J Med Genet A 146A:2644–2650
-
(2008)
Am J Med Genet A
, vol.146A
, pp. 2644-2650
-
-
Cho, G.1
Bhat, S.S.2
Gao, J.3
-
31
-
-
40749122613
-
Sizn1 is a novel protein that functions as a transcriptional coactivator of bone morphogenic protein signaling
-
COI: 1:CAS:528:DC%2BD1cXivVajt70%3D, PID: 18160706
-
Cho G, Lim Y, Zand D, Golden JA (2008b) Sizn1 is a novel protein that functions as a transcriptional coactivator of bone morphogenic protein signaling. Mol Cell Biol 28:1565–1572
-
(2008)
Mol Cell Biol
, vol.28
, pp. 1565-1572
-
-
Cho, G.1
Lim, Y.2
Zand, D.3
Golden, J.A.4
-
32
-
-
79953052805
-
XLMR candidate mouse gene, Zcchc12 (Sizn1) is a novel marker of Cajal-Retzius cells
-
COI: 1:CAS:528:DC%2BC3MXjvV2rsbY%3D, PID: 21172456
-
Cho G, Lim Y, Golden JA (2011) XLMR candidate mouse gene, Zcchc12 (Sizn1) is a novel marker of Cajal-Retzius cells. Gene Expr Patterns 11:216–200
-
(2011)
Gene Expr Patterns
, vol.11
, pp. 200-216
-
-
Cho, G.1
Lim, Y.2
Golden, J.A.3
-
33
-
-
84874663519
-
Endogenous retroviruses function as species-specific enhancer elements in the placenta
-
COI: 1:CAS:528:DC%2BC3sXit1ahtLk%3D, PID: 23396136
-
Chuong EB, Rumi MAK, Soares MJ, Baker JC (2013) Endogenous retroviruses function as species-specific enhancer elements in the placenta. Nat Genet 45:325–329
-
(2013)
Nat Genet
, vol.45
, pp. 325-329
-
-
Chuong, E.B.1
Rumi, M.A.K.2
Soares, M.J.3
Baker, J.C.4
-
34
-
-
33744497802
-
Birth of a chimeric primate gene by capture of the transposase gene from a mobile element
-
COI: 1:CAS:528:DC%2BD28Xlt1Cht7w%3D, PID: 16672366
-
Cordaux R, Udit S, Batzer MA, Feschotte C (2006) Birth of a chimeric primate gene by capture of the transposase gene from a mobile element. Proc Natl Acad Sci U S A 103:8101–8106
-
(2006)
Proc Natl Acad Sci U S A
, vol.103
, pp. 8101-8106
-
-
Cordaux, R.1
Udit, S.2
Batzer, M.A.3
Feschotte, C.4
-
35
-
-
84857124504
-
Ancestral capture of syncytin-Car1, a fusogenic endogenous retroviral envelope gene involved in placentation and conserved in Carnivora
-
COI: 1:CAS:528:DC%2BC38XivVOjtLY%3D, PID: 22308384
-
Cornelis G, Heidmann O, Bernard-Stoecklin S et al (2012) Ancestral capture of syncytin-Car1, a fusogenic endogenous retroviral envelope gene involved in placentation and conserved in Carnivora. Proc Natl Acad Sci U S A 109:E432–E441
-
(2012)
Proc Natl Acad Sci U S A
, vol.109
, pp. E432-E441
-
-
Cornelis, G.1
Heidmann, O.2
Bernard-Stoecklin, S.3
-
36
-
-
84874453328
-
Captured retroviral envelope syncytin gene associated with the unique placental structure of higher ruminants
-
COI: 1:CAS:528:DC%2BC3sXkvVyrtLs%3D, PID: 23401540
-
Cornelis G, Heidmann O, Degrelle SA et al (2013) Captured retroviral envelope syncytin gene associated with the unique placental structure of higher ruminants. Proc Natl Acad Sci U S A 110:E828–E837
-
(2013)
Proc Natl Acad Sci U S A
, vol.110
, pp. E828-E837
-
-
Cornelis, G.1
Heidmann, O.2
Degrelle, S.A.3
-
37
-
-
84907898472
-
Retroviral envelope syncytin capture in an ancestrally diverged mammalian clade for placentation in the primitive Afrotherian tenrecs
-
COI: 1:CAS:528:DC%2BC2cXhs1ChtrbI, PID: 25267646
-
Cornelis G, Vernochet C, Malicorne S et al (2014) Retroviral envelope syncytin capture in an ancestrally diverged mammalian clade for placentation in the primitive Afrotherian tenrecs. Proc Natl Acad Sci 111:E4332–E4341
-
(2014)
Proc Natl Acad Sci
, vol.111
, pp. E4332-E4341
-
-
Cornelis, G.1
Vernochet, C.2
Malicorne, S.3
-
38
-
-
84922309125
-
Retroviral envelope gene captures and syncytin exaptation for placentation in marsupials
-
COI: 1:CAS:528:DC%2BC2MXhtFKht74%3D, PID: 25605903
-
Cornelis G, Vernochet C, Carradec Q et al (2015) Retroviral envelope gene captures and syncytin exaptation for placentation in marsupials. Proc Natl Acad Sci U S A 112:E487–E496
-
(2015)
Proc Natl Acad Sci U S A
, vol.112
, pp. E487-E496
-
-
Cornelis, G.1
Vernochet, C.2
Carradec, Q.3
-
39
-
-
84879911829
-
The evolution of lineage-specific regulatory activities in the human embryonic limb
-
COI: 1:CAS:528:DC%2BC3sXhtVGrsrbF, PID: 23827682
-
Cotney J, Leng J, Yin J et al (2013) The evolution of lineage-specific regulatory activities in the human embryonic limb. Cell 154:185–196
-
(2013)
Cell
, vol.154
, pp. 185-196
-
-
Cotney, J.1
Leng, J.2
Yin, J.3
-
40
-
-
84873507928
-
Transposable elements re-wire and fine-tune the transcriptome
-
COI: 1:CAS:528:DC%2BC3sXivVehtbk%3D, PID: 23358118
-
Cowley M, Oakey RJ (2013) Transposable elements re-wire and fine-tune the transcriptome. PLoS Genet 9:e1003234
-
(2013)
PLoS Genet
, vol.9
, pp. e1003234
-
-
Cowley, M.1
Oakey, R.J.2
-
41
-
-
0032574346
-
The evolutionary genetics of speciation
-
COI: 1:STN:280:DyaK1c7psVehsw%3D%3D, PID: 9533126
-
Coyne JA, Orr HA (1998) The evolutionary genetics of speciation. Philos Trans R Soc Lond B Biol Sci 353:287–305
-
(1998)
Philos Trans R Soc Lond B Biol Sci
, vol.353
, pp. 287-305
-
-
Coyne, J.A.1
Orr, H.A.2
-
42
-
-
0029156092
-
Characterization and genomic mapping of the ZNF80 locus: expression of this zinc-finger gene is driven by a solitary LTR of ERV9 endogenous retrovrial family
-
PID: 7659503
-
Cristofano AD, Strazzullo M, Longo L, Mantia GL (1995) Characterization and genomic mapping of the ZNF80 locus: expression of this zinc-finger gene is driven by a solitary LTR of ERV9 endogenous retrovrial family. Nucl Acids Res 23:2823–2830
-
(1995)
Nucl Acids Res
, vol.23
, pp. 2823-2830
-
-
Cristofano, A.D.1
Strazzullo, M.2
Longo, L.3
Mantia, G.L.4
-
43
-
-
78650855113
-
Impact of Alu repeats on the evolution of human p53 binding sites
-
COI: 1:CAS:528:DC%2BC3MXhsFWitr0%3D, PID: 21208455
-
Cui F, Sirotin MV, Zhurkin VB (2011) Impact of Alu repeats on the evolution of human p53 binding sites. Biol Direct 6:2
-
(2011)
Biol Direct
, vol.6
, pp. 2
-
-
Cui, F.1
Sirotin, M.V.2
Zhurkin, V.B.3
-
44
-
-
33947208484
-
The tightly regulated promoter of the xanA gene of Aspergillus nidulans is included in a helitron
-
COI: 1:CAS:528:DC%2BD2sXksVWlsLs%3D, PID: 17367381
-
Cultrone A, Domínguez YR, Drevet C, Scazzocchio C, Fernández-Martín R (2007) The tightly regulated promoter of the xanA gene of Aspergillus nidulans is included in a helitron. Mol Microbiol 63:1577–1587
-
(2007)
Mol Microbiol
, vol.63
, pp. 1577-1587
-
-
Cultrone, A.1
Domínguez, Y.R.2
Drevet, C.3
Scazzocchio, C.4
Fernández-Martín, R.5
-
45
-
-
38149117037
-
Bursts and horizontal evolution of DNA transposons in the speciation of pseudotetraploid salmonids
-
PID: 18021408
-
de Boer JG, Yazawa R, Davidson WS, Koop BF (2007) Bursts and horizontal evolution of DNA transposons in the speciation of pseudotetraploid salmonids. BMC Genomics 8:422
-
(2007)
BMC Genomics
, vol.8
, pp. 422
-
-
de Boer, J.G.1
Yazawa, R.2
Davidson, W.S.3
Koop, B.F.4
-
46
-
-
84877749322
-
Exaptation of transposable elements into novel cis-regulatory elements: is the evidence always strong?
-
PID: 23486611
-
de Souza FSJ, Franchini LF, Rubinstein M (2013) Exaptation of transposable elements into novel cis-regulatory elements: is the evidence always strong? Mol Biol Evol 30:1239–1251
-
(2013)
Mol Biol Evol
, vol.30
, pp. 1239-1251
-
-
de Souza, F.S.J.1
Franchini, L.F.2
Rubinstein, M.3
-
47
-
-
84855199454
-
Alu elements: know the SINEs
-
COI: 1:CAS:528:DC%2BC38XhtVyis7o%3D, PID: 22204421
-
Deininger P (2011a) Alu elements: know the SINEs. Genome Biol 12:236
-
(2011)
Genome Biol
, vol.12
, pp. 236
-
-
Deininger, P.1
-
49
-
-
0032796376
-
Alu repeats and human disease
-
COI: 1:CAS:528:DyaK1MXjvFWrtr4%3D, PID: 10381326
-
Deininger PL, Batzer MA (1999) Alu repeats and human disease. Mol Genet Metab 67:183–193
-
(1999)
Mol Genet Metab
, vol.67
, pp. 183-193
-
-
Deininger, P.L.1
Batzer, M.A.2
-
50
-
-
84907217918
-
Noncoding origins of anthropoid traits and a new null model of transposon functionalization
-
PID: 25043600
-
del Rosario RCH, Rayan NA, Prabhakar S (2014) Noncoding origins of anthropoid traits and a new null model of transposon functionalization. Genome Res 24:1469–1484
-
(2014)
Genome Res
, vol.24
, pp. 1469-1484
-
-
del Rosario, R.C.H.1
Rayan, N.A.2
Prabhakar, S.3
-
51
-
-
84865727393
-
The GENCODE v7 catalogue of human long non-coding RNAs: analysis of their structure, evolution and expression
-
COI: 1:CAS:528:DC%2BC38XhtlentLvO, PID: 22955988
-
Derrien T, Johnson R, Bussotti G et al (2012) The GENCODE v7 catalogue of human long non-coding RNAs: analysis of their structure, evolution and expression. Genome Res 22:1775–1789
-
(2012)
Genome Res
, vol.22
, pp. 1775-1789
-
-
Derrien, T.1
Johnson, R.2
Bussotti, G.3
-
52
-
-
84899528769
-
RNA-seq reveals transcriptomic shock involving transposable elements reactivation in hybrids of young lake whitefish species
-
COI: 1:CAS:528:DC%2BC2cXmvFCitL4%3D, PID: 24505119
-
Dion-Cote AM, Renaut S, Normandeau E, Bernatchez L (2014) RNA-seq reveals transcriptomic shock involving transposable elements reactivation in hybrids of young lake whitefish species. Mol Biol Evol 31:1188–1199
-
(2014)
Mol Biol Evol
, vol.31
, pp. 1188-1199
-
-
Dion-Cote, A.M.1
Renaut, S.2
Normandeau, E.3
Bernatchez, L.4
-
53
-
-
84865757142
-
Landscape of transcription in human cells
-
COI: 1:CAS:528:DC%2BC38XhtlGnt73M, PID: 22955620
-
Djebali S, Davis CA, Merkel A et al (2012) Landscape of transcription in human cells. Nature 489:101–108
-
(2012)
Nature
, vol.489
, pp. 101-108
-
-
Djebali, S.1
Davis, C.A.2
Merkel, A.3
-
54
-
-
14644435850
-
LINE-1 amplification accompanies explosive genome repatterning in rodents
-
COI: 1:CAS:528:DC%2BD2MXhtFCqtLw%3D, PID: 15702417
-
Dobigny G, Ozouf-Costaz C, Waters PD, Bonillo C, Coutanceau JP, Volobouev V (2004) LINE-1 amplification accompanies explosive genome repatterning in rodents. Chromosome Res 12:787–793
-
(2004)
Chromosome Res
, vol.12
, pp. 787-793
-
-
Dobigny, G.1
Ozouf-Costaz, C.2
Waters, P.D.3
Bonillo, C.4
Coutanceau, J.P.5
Volobouev, V.6
-
55
-
-
84940767554
-
HTT-DB: Horizontally transferred transposable elements database
-
PID: 25940562
-
Dotto BR, Carvalho EL, Silva AF et al (2015) HTT-DB: Horizontally transferred transposable elements database. Bioinformatics 31:2915–2917
-
(2015)
Bioinformatics
, vol.31
, pp. 2915-2917
-
-
Dotto, B.R.1
Carvalho, E.L.2
Silva, A.F.3
-
56
-
-
84885215226
-
Systematic classification of non-coding RNAs by epigenomic similarity
-
Dozmorov MG, Giles CB, Koelsch KA, Wren JD (2013) Systematic classification of non-coding RNAs by epigenomic similarity. BMC Bioinf 14:S2
-
(2013)
BMC Bioinf
, vol.14
, pp. S2
-
-
Dozmorov, M.G.1
Giles, C.B.2
Koelsch, K.A.3
Wren, J.D.4
-
57
-
-
14144254156
-
Syncytin-A and syncytin-B, two fusogenic placenta-specific murine envelope genes of retroviral origin conserved in Muridae
-
COI: 1:CAS:528:DC%2BD2MXis1CqsL4%3D, PID: 15644441
-
Dupressoir A, Marceau G, Vernochet C et al (2005) Syncytin-A and syncytin-B, two fusogenic placenta-specific murine envelope genes of retroviral origin conserved in Muridae. Proc Natl Acad Sci U S A 102:725–730
-
(2005)
Proc Natl Acad Sci U S A
, vol.102
, pp. 725-730
-
-
Dupressoir, A.1
Marceau, G.2
Vernochet, C.3
-
58
-
-
25144467005
-
The SCAN domain family of zinc finger transcription factors
-
COI: 1:CAS:528:DC%2BD2MXhtVanu7nE, PID: 16139965
-
Edelstein LC, Collins T (2005) The SCAN domain family of zinc finger transcription factors. Gene 359:1–17
-
(2005)
Gene
, vol.359
, pp. 1-17
-
-
Edelstein, L.C.1
Collins, T.2
-
59
-
-
45849118721
-
The evolution of the DLK1-DIO3 imprinted domain in mammals
-
COI: 1:CAS:528:DC%2BD1cXotVejtL8%3D
-
Edwards CA, Mungall AJ, Matthews L et al (2008) The evolution of the DLK1-DIO3 imprinted domain in mammals. PLoS Biol 6:1292–1305
-
(2008)
PLoS Biol
, vol.6
, pp. 1292-1305
-
-
Edwards, C.A.1
Mungall, A.J.2
Matthews, L.3
-
60
-
-
49649094943
-
A dual origin of the Xist gene from a protein-coding gene and a set of transposable elements
-
Elisaphenko EA, Kolesnikov NN, Shevchenko AI et al (2008) A dual origin of the Xist gene from a protein-coding gene and a set of transposable elements. PLoS One 3:1–11
-
(2008)
PLoS One
, vol.3
, pp. 1-11
-
-
Elisaphenko, E.A.1
Kolesnikov, N.N.2
Shevchenko, A.I.3
-
61
-
-
84863946845
-
Transformation of a transposon into a derived prolactin promoter with function during human pregnancy
-
COI: 1:CAS:528:DC%2BC38Xht1WrurjJ, PID: 22733751
-
Emera D, Wagner GP (2012a) Transformation of a transposon into a derived prolactin promoter with function during human pregnancy. Proc Natl Acad Sci U S A 109:11246–11251
-
(2012)
Proc Natl Acad Sci U S A
, vol.109
, pp. 11246-11251
-
-
Emera, D.1
Wagner, G.P.2
-
62
-
-
84863918449
-
Transposable element recruitments in the mammalian placenta: impacts and mechanisms
-
COI: 1:CAS:528:DC%2BC38XhtFantrbI, PID: 22753775
-
Emera D, Wagner GP (2012b) Transposable element recruitments in the mammalian placenta: impacts and mechanisms. Brief Funct Genomics 11:267–276
-
(2012)
Brief Funct Genomics
, vol.11
, pp. 267-276
-
-
Emera, D.1
Wagner, G.P.2
-
63
-
-
84861320913
-
Convergent evolution of endometrial prolactin expression in primates, mice, and elephants through the independent recruitment of transposable elements
-
COI: 1:CAS:528:DC%2BC3MXhs1ynur3N, PID: 21813467
-
Emera D, Casola C, Lynch VJ, Wildman DE, Agnew D, Wagner GP (2012) Convergent evolution of endometrial prolactin expression in primates, mice, and elephants through the independent recruitment of transposable elements. Mol Biol Evol 29:239–247
-
(2012)
Mol Biol Evol
, vol.29
, pp. 239-247
-
-
Emera, D.1
Casola, C.2
Lynch, V.J.3
Wildman, D.E.4
Agnew, D.5
Wagner, G.P.6
-
64
-
-
58949084539
-
Adaptive evolution in zinc finger transcription factors
-
PID: 19119423
-
Emerson RO, Thomas JH (2009) Adaptive evolution in zinc finger transcription factors. PLoS Genet 5:e1000325
-
(2009)
PLoS Genet
, vol.5
, pp. e1000325
-
-
Emerson, R.O.1
Thomas, J.H.2
-
65
-
-
81255184397
-
Retrofitting the genome: L1 extinction follows endogenous retroviral expansion in a group of muroid rodents
-
PID: 21957310
-
Erickson IK, Cantrell MA, Scott L, Wichman HA (2011) Retrofitting the genome: L1 extinction follows endogenous retroviral expansion in a group of muroid rodents. J Virol 85:12315–12323
-
(2011)
J Virol
, vol.85
, pp. 12315-12323
-
-
Erickson, I.K.1
Cantrell, M.A.2
Scott, L.3
Wichman, H.A.4
-
66
-
-
4143085887
-
Merlin, a new superfamily of DNA transposons identified in diverse animal genomes and related to bacterial IS1016 insertion sequences
-
COI: 1:CAS:528:DC%2BD2cXntVCitbw%3D, PID: 15190130
-
Feschotte C (2004) Merlin, a new superfamily of DNA transposons identified in diverse animal genomes and related to bacterial IS1016 insertion sequences. Mol Biol Evol 21:1769–1780
-
(2004)
Mol Biol Evol
, vol.21
, pp. 1769-1780
-
-
Feschotte, C.1
-
67
-
-
42349096534
-
Transposable elements and the evolution of regulatory networks
-
COI: 1:CAS:528:DC%2BD1cXkvVOhs7k%3D, PID: 18368054
-
Feschotte C (2008) Transposable elements and the evolution of regulatory networks. Nat Rev Genet 9:397–405
-
(2008)
Nat Rev Genet
, vol.9
, pp. 397-405
-
-
Feschotte, C.1
-
68
-
-
37549029474
-
DNA transposons and the evolution of eukaryotic genomes
-
COI: 1:CAS:528:DC%2BD1cXns1Sisw%3D%3D, PID: 18076328
-
Feschotte C, Pritham EJ (2007) DNA transposons and the evolution of eukaryotic genomes. Annu Rev Genet 41:331–368
-
(2007)
Annu Rev Genet
, vol.41
, pp. 331-368
-
-
Feschotte, C.1
Pritham, E.J.2
-
69
-
-
84901651635
-
Deep transcriptome profiling of mammalian stem cells supports a regulatory role for retrotransposons in pluripotency maintenance
-
COI: 1:CAS:528:DC%2BC2cXmvFSjt7w%3D, PID: 24777452
-
Fort A, Hashimoto K, Yamada D et al (2014) Deep transcriptome profiling of mammalian stem cells supports a regulatory role for retrotransposons in pluripotency maintenance. Nat Genet 46:558–566
-
(2014)
Nat Genet
, vol.46
, pp. 558-566
-
-
Fort, A.1
Hashimoto, K.2
Yamada, D.3
-
70
-
-
80053067142
-
Convergent evolution of two mammalian neuronal enhancers by sequential exaptation of unrelated retroposons
-
COI: 1:CAS:528:DC%2BC3MXht1Gqt7%2FE, PID: 21876128
-
Franchini LF, López-Leal R, Nasif S et al (2011) Convergent evolution of two mammalian neuronal enhancers by sequential exaptation of unrelated retroposons. Proc Natl Acad Sci U S A 108:15270–15275
-
(2011)
Proc Natl Acad Sci U S A
, vol.108
, pp. 15270-15275
-
-
Franchini, L.F.1
López-Leal, R.2
Nasif, S.3
-
71
-
-
60149095444
-
Most mammalian mRNAs are conserved targets of microRNAs
-
COI: 1:CAS:528:DC%2BD1MXptFWjuw%3D%3D, PID: 18955434
-
Friedman RC, Farh KKH, Burge CB, Bartel DP (2009) Most mammalian mRNAs are conserved targets of microRNAs. Genome Res 19:92–105
-
(2009)
Genome Res
, vol.19
, pp. 92-105
-
-
Friedman, R.C.1
Farh, K.K.H.2
Burge, C.B.3
Bartel, D.P.4
-
72
-
-
78549247150
-
The rapid generation of chimerical genes expanding protein diversity in zebrafish
-
COI: 1:CAS:528:DC%2BC3cXhsFagt73F, PID: 21106061
-
Fu B, Chen M, Zou M, Long M, He S (2010) The rapid generation of chimerical genes expanding protein diversity in zebrafish. BMC Genomics 11:657
-
(2010)
BMC Genomics
, vol.11
, pp. 657
-
-
Fu, B.1
Chen, M.2
Zou, M.3
Long, M.4
He, S.5
-
73
-
-
0348048755
-
L1 (LINE-1) retrotransposon diversity differs dramatically between mammals and fish
-
COI: 1:CAS:528:DC%2BD3sXpvFyrsbs%3D, PID: 14698614
-
Furano AV, Duvernell DD, Boissinot S (2004) L1 (LINE-1) retrotransposon diversity differs dramatically between mammals and fish. Trends Genet 20:9–14
-
(2004)
Trends Genet
, vol.20
, pp. 9-14
-
-
Furano, A.V.1
Duvernell, D.D.2
Boissinot, S.3
-
74
-
-
34248512741
-
Evolutionary dynamics of transposable elements in the short-tailed opossum Monodelphis domestica
-
COI: 1:CAS:528:DC%2BD2sXnvVWktbc%3D, PID: 17495012
-
Gentles AJ, Wakefield MJ, Kohany O et al (2007) Evolutionary dynamics of transposable elements in the short-tailed opossum Monodelphis domestica. Genome Res 17:992–1004
-
(2007)
Genome Res
, vol.17
, pp. 992-1004
-
-
Gentles, A.J.1
Wakefield, M.J.2
Kohany, O.3
-
75
-
-
84876799419
-
Transposable elements as genetic regulatory substrates in early development
-
COI: 1:CAS:528:DC%2BC3sXisVSgsLY%3D, PID: 23411159
-
Gifford WD, Pfaff SL, Macfarlan TS (2013) Transposable elements as genetic regulatory substrates in early development. Trends Cell Biol 23:218–226
-
(2013)
Trends Cell Biol
, vol.23
, pp. 218-226
-
-
Gifford, W.D.1
Pfaff, S.L.2
Macfarlan, T.S.3
-
76
-
-
77951778552
-
A role for host-parasite interactions in the horizontal transfer of transposons across phyla
-
COI: 1:CAS:528:DC%2BC3cXltl2ltrY%3D, PID: 20428170
-
Gilbert C, Schaack S, Pace JK 2nd, Brindley PJ, Feschotte C (2010) A role for host-parasite interactions in the horizontal transfer of transposons across phyla. Nature 464:1347–1350
-
(2010)
Nature
, vol.464
, pp. 1347-1350
-
-
Gilbert, C.1
Schaack, S.2
Pace, J.K.3
Brindley, P.J.4
Feschotte, C.5
-
77
-
-
84855898254
-
Rampant horizontal transfer of SPIN transposons in squamate reptiles
-
COI: 1:CAS:528:DC%2BC38Xos1Sisw%3D%3D, PID: 21771716
-
Gilbert C, Hernandez SS, Flores-Benabib J, Smith EN, Feschotte C (2012) Rampant horizontal transfer of SPIN transposons in squamate reptiles. Mol Biol Evol 29:503–515
-
(2012)
Mol Biol Evol
, vol.29
, pp. 503-515
-
-
Gilbert, C.1
Hernandez, S.S.2
Flores-Benabib, J.3
Smith, E.N.4
Feschotte, C.5
-
78
-
-
84947495588
-
Genome-wide identification and classification of microRNAs derived from repetitive elements
-
PID: 25705168
-
Gim JA, Ha HS, Ahn K, Kim DS, Kim HS (2014) Genome-wide identification and classification of microRNAs derived from repetitive elements. Genomics Inform 12:261–267
-
(2014)
Genomics Inform
, vol.12
, pp. 261-267
-
-
Gim, J.A.1
Ha, H.S.2
Ahn, K.3
Kim, D.S.4
Kim, H.S.5
-
79
-
-
84979851107
-
Transposable elements and DNA methylation create in embryonic stem cells human-specific regulatory sequences associated with distal enhancers and noncoding RNAs
-
COI: 1:CAS:528:DC%2BC2MXhs1Wiu73I, PID: 25956794
-
Glinsky GV (2015) Transposable elements and DNA methylation create in embryonic stem cells human-specific regulatory sequences associated with distal enhancers and noncoding RNAs. Genome Biol Evol 7:1432–1454
-
(2015)
Genome Biol Evol
, vol.7
, pp. 1432-1454
-
-
Glinsky, G.V.1
-
80
-
-
68049102316
-
Exaptation of an ancient Alu short interspersed element provides a highly conserved vitamin D-mediated innate immune response in humans and primates
-
PID: 19607716
-
Gombart AF, Saito T, Koeffler HP (2009) Exaptation of an ancient Alu short interspersed element provides a highly conserved vitamin D-mediated innate immune response in humans and primates. BMC Genomics 10:321
-
(2009)
BMC Genomics
, vol.10
, pp. 321
-
-
Gombart, A.F.1
Saito, T.2
Koeffler, H.P.3
-
81
-
-
23844436019
-
Extinction of LINE-1 activity coincident with a major mammalian radiation in rodents
-
COI: 1:STN:280:DC%2BD2Mvislekuw%3D%3D, PID: 16093693
-
Grahn RA, Rinehart TA, Cantrell MA, Wichman HA (2005) Extinction of LINE-1 activity coincident with a major mammalian radiation in rodents. Cytogenet Genome Res 110:407–415
-
(2005)
Cytogenet Genome Res
, vol.110
, pp. 407-415
-
-
Grahn, R.A.1
Rinehart, T.A.2
Cantrell, M.A.3
Wichman, H.A.4
-
82
-
-
84904985459
-
Regulation of microRNA biogenesis
-
COI: 1:CAS:528:DC%2BC2cXhtFGqu7nP, PID: 25027649
-
Ha M, Kim VN (2014) Regulation of microRNA biogenesis. Nat Rev Mol Cell Biol 15:509–524
-
(2014)
Nat Rev Mol Cell Biol
, vol.15
, pp. 509-524
-
-
Ha, M.1
Kim, V.N.2
-
83
-
-
0030845714
-
Chicken repeat 1 (CR1) elements, which define an ancient family of vertebrate non-LTR retrotransposons, contain two closely spaced open reading frames
-
COI: 1:CAS:528:DyaK2sXlsFGmsLg%3D, PID: 9332379
-
Haas NB, Grabowski JM, Sivitz AB, Burch JBE (1997) Chicken repeat 1 (CR1) elements, which define an ancient family of vertebrate non-LTR retrotransposons, contain two closely spaced open reading frames. Gene 197:305–309
-
(1997)
Gene
, vol.197
, pp. 305-309
-
-
Haas, N.B.1
Grabowski, J.M.2
Sivitz, A.B.3
Burch, J.B.E.4
-
84
-
-
0027379052
-
Identification and characterization of an Alu-containing, T-cell-specific enhancer located in the last intron of the human CD8 alpha gene
-
COI: 1:CAS:528:DyaK2cXisV2hug%3D%3D, PID: 8413295
-
Hambor JE, Mennone J, Coon ME, Hanke JH, Kavathas P (1993) Identification and characterization of an Alu-containing, T-cell-specific enhancer located in the last intron of the human CD8 alpha gene. Mol Cell Biol 13:7056–7070
-
(1993)
Mol Cell Biol
, vol.13
, pp. 7056-7070
-
-
Hambor, J.E.1
Mennone, J.2
Coon, M.E.3
Hanke, J.H.4
Kavathas, P.5
-
85
-
-
84885086234
-
Identification and evolution of the silkworm helitrons and their contribution to transcripts
-
COI: 1:CAS:528:DC%2BC3sXhsFOju7fJ, PID: 23771679
-
Han MJ, Shen YH, Xu MS, Liang HY, Zhang HH, Zhang Z (2013) Identification and evolution of the silkworm helitrons and their contribution to transcripts. DNA Res 20:471–484
-
(2013)
DNA Res
, vol.20
, pp. 471-484
-
-
Han, M.J.1
Shen, Y.H.2
Xu, M.S.3
Liang, H.Y.4
Zhang, H.H.5
Zhang, Z.6
-
86
-
-
70449098000
-
p53 responsive elements in human retrotransposons
-
COI: 1:CAS:528:DC%2BD1MXhtVKhs7rN, PID: 19718052
-
Harris CR, Dewan A, Zupnick A et al (2009) p53 responsive elements in human retrotransposons. Oncogene 28:3857–3865
-
(2009)
Oncogene
, vol.28
, pp. 3857-3865
-
-
Harris, C.R.1
Dewan, A.2
Zupnick, A.3
-
87
-
-
0035949607
-
Alu-mediated inactivation of the human CMP- N-acetylneuraminic acid hydroxylase gene
-
COI: 1:CAS:528:DC%2BD3MXnt1yqur8%3D, PID: 11562455
-
Hayakawa T, Satta Y, Gagneux P, Varki A, Takahata N (2001) Alu-mediated inactivation of the human CMP- N-acetylneuraminic acid hydroxylase gene. Proc Natl Acad Sci U S A 98:11399–11404
-
(2001)
Proc Natl Acad Sci U S A
, vol.98
, pp. 11399-11404
-
-
Hayakawa, T.1
Satta, Y.2
Gagneux, P.3
Varki, A.4
Takahata, N.5
-
88
-
-
84920982305
-
Pan-vertebrate comparative genomics unmasks retrovirus macroevolution
-
COI: 1:CAS:528:DC%2BC2cXitFCqs7zN, PID: 25535393
-
Hayward A, Cornwallis CK, Jern P (2015) Pan-vertebrate comparative genomics unmasks retrovirus macroevolution. Proc Natl Acad Sci U S A 112:464–469
-
(2015)
Proc Natl Acad Sci U S A
, vol.112
, pp. 464-469
-
-
Hayward, A.1
Cornwallis, C.K.2
Jern, P.3
-
89
-
-
84887376115
-
ANRIL/CDKN2B-AS shows two-stage clade-specific evolution and becomes conserved after transposon insertions in simians
-
PID: 24225082
-
He S, Gu W, Li Y, Zhu H (2013) ANRIL/CDKN2B-AS shows two-stage clade-specific evolution and becomes conserved after transposon insertions in simians. BMC Evol Biol 13:247
-
(2013)
BMC Evol Biol
, vol.13
, pp. 247
-
-
He, S.1
Gu, W.2
Li, Y.3
Zhu, H.4
-
90
-
-
71949099774
-
Identification of an endogenous retroviral envelope gene with fusogenic activity and placenta-specific expression in the rabbit: a new “syncytin” in a third order of mammals
-
PID: 19943933
-
Heidmann O, Vernochet C, Dupressoir A, Heidmann T (2009) Identification of an endogenous retroviral envelope gene with fusogenic activity and placenta-specific expression in the rabbit: a new “syncytin” in a third order of mammals. Retrovirology 6:107
-
(2009)
Retrovirology
, vol.6
, pp. 107
-
-
Heidmann, O.1
Vernochet, C.2
Dupressoir, A.3
Heidmann, T.4
-
91
-
-
77951823093
-
The genome of the Western clawed frog Xenopus tropicalis
-
COI: 1:CAS:528:DC%2BC3cXlt1Crt70%3D, PID: 20431018
-
Hellsten U, Harland RM, Gilchrist MJ et al (2010) The genome of the Western clawed frog Xenopus tropicalis. Science 328:633–636
-
(2010)
Science
, vol.328
, pp. 633-636
-
-
Hellsten, U.1
Harland, R.M.2
Gilchrist, M.J.3
-
92
-
-
84924120484
-
Selective expression of sense and antisense transcripts of the sushi-ichi-related retrotransposon—derived family during mouse placentogenesis
-
PID: 25888968
-
Henke C, Strissel PL, Schubert MT et al (2015) Selective expression of sense and antisense transcripts of the sushi-ichi-related retrotransposon—derived family during mouse placentogenesis. Retrovirology 12:9
-
(2015)
Retrovirology
, vol.12
, pp. 9
-
-
Henke, C.1
Strissel, P.L.2
Schubert, M.T.3
-
93
-
-
63449117467
-
Segmental copy number variation shapes tissue transcriptomes
-
COI: 1:CAS:528:DC%2BD1MXivVKnur8%3D, PID: 19270705
-
Henrichsen CN, Vinckenbosch N, Zöllner S et al (2009) Segmental copy number variation shapes tissue transcriptomes. Nat Genet 41:424–429
-
(2009)
Nat Genet
, vol.41
, pp. 424-429
-
-
Henrichsen, C.N.1
Vinckenbosch, N.2
Zöllner, S.3
-
94
-
-
77649269711
-
Transcriptional rewiring of the sex determining dmrt1 gene duplicate by transposable elements
-
PID: 20169179
-
Herpin A, Braasch I, Kraeussling M et al (2010) Transcriptional rewiring of the sex determining dmrt1 gene duplicate by transposable elements. PLoS Genet 6:e1000844
-
(2010)
PLoS Genet
, vol.6
, pp. e1000844
-
-
Herpin, A.1
Braasch, I.2
Kraeussling, M.3
-
95
-
-
84929705123
-
Principles of long noncoding RNA evolution derived from direct comparison of transcriptomes in 17 species
-
COI: 1:CAS:528:DC%2BC2MXotVCmtb4%3D, PID: 25959816
-
Hezroni H, Koppstein D, Schwartz MG, Avrutin A, Bartel DP, Ulitsky I (2015) Principles of long noncoding RNA evolution derived from direct comparison of transcriptomes in 17 species. Cell Rep 11:1110–1122
-
(2015)
Cell Rep
, vol.11
, pp. 1110-1122
-
-
Hezroni, H.1
Koppstein, D.2
Schwartz, M.G.3
Avrutin, A.4
Bartel, D.P.5
Ulitsky, I.6
-
96
-
-
37549067404
-
Evolution of the Xenopus piggyBac transposon family TxpB: domesticated and untamed strategies of transposon subfamilies
-
COI: 1:CAS:528:DC%2BD1cXnsVGjug%3D%3D, PID: 17934208
-
Hikosaka A, Kobayashi T, Saito Y, Kawahara A (2007) Evolution of the Xenopus piggyBac transposon family TxpB: domesticated and untamed strategies of transposon subfamilies. Mol Biol Evol 24:2648–2656
-
(2007)
Mol Biol Evol
, vol.24
, pp. 2648-2656
-
-
Hikosaka, A.1
Kobayashi, T.2
Saito, Y.3
Kawahara, A.4
-
97
-
-
10644283823
-
Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution
-
COI: 1:CAS:528:DC%2BD2cXhtVGmtb7M
-
Hillier L, Miller W, Birney E et al (2004) Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution. Nature 432:695–716
-
(2004)
Nature
, vol.432
, pp. 695-716
-
-
Hillier, L.1
Miller, W.2
Birney, E.3
-
98
-
-
84880799429
-
Alu elements in ANRIL non-coding RNA at chromosome 9p21 modulate atherogenic cell functions through trans-regulation of gene networks
-
Holdt LM, Hoffmann S, Sass K et al (2013) Alu elements in ANRIL non-coding RNA at chromosome 9p21 modulate atherogenic cell functions through trans-regulation of gene networks. PLoS Genet 9:1–12
-
(2013)
PLoS Genet
, vol.9
, pp. 1-12
-
-
Holdt, L.M.1
Hoffmann, S.2
Sass, K.3
-
99
-
-
35848941492
-
Population and evolutionary dynamics of helitron transposable elements in Arabidopsis thaliana
-
COI: 1:CAS:528:DC%2BD2sXhtlGmsbfE, PID: 17890239
-
Hollister JD, Gaut BS (2007) Population and evolutionary dynamics of helitron transposable elements in Arabidopsis thaliana. Mol Biol Evol 24:2515–2524
-
(2007)
Mol Biol Evol
, vol.24
, pp. 2515-2524
-
-
Hollister, J.D.1
Gaut, B.S.2
-
100
-
-
84876798186
-
The zebrafish reference genome sequence and its relationship to the human genome
-
COI: 1:CAS:528:DC%2BC3sXlvF2isb0%3D, PID: 23594743
-
Howe K, Clark MD, Torroja CF et al (2013) The zebrafish reference genome sequence and its relationship to the human genome. Nature 496:498–503
-
(2013)
Nature
, vol.496
, pp. 498-503
-
-
Howe, K.1
Clark, M.D.2
Torroja, C.F.3
-
101
-
-
0035734951
-
Evidence for genomic rearrangements mediated by human endogenous retroviruses during primate evolution
-
COI: 1:CAS:528:DC%2BD3MXovFGisrg%3D, PID: 11704760
-
Hughes JF, Coffin JM (2001) Evidence for genomic rearrangements mediated by human endogenous retroviruses during primate evolution. Nat Genet 29:487–489
-
(2001)
Nat Genet
, vol.29
, pp. 487-489
-
-
Hughes, J.F.1
Coffin, J.M.2
-
102
-
-
31144439046
-
Human endogenous retroviral elements as indicators of ectopic recombination events in the primate genome
-
COI: 1:CAS:528:DC%2BD28Xjs1KrsA%3D%3D, PID: 16157677
-
Hughes JF, Coffin JM (2005) Human endogenous retroviral elements as indicators of ectopic recombination events in the primate genome. Genetics 171:1183–1194
-
(2005)
Genetics
, vol.171
, pp. 1183-1194
-
-
Hughes, J.F.1
Coffin, J.M.2
-
103
-
-
25444521540
-
Reversion mutation of ib oculocutaneous albinism to wild-type pigmentation in medaka fish
-
COI: 1:CAS:528:DC%2BD2MXhtFeltrfO, PID: 16162178
-
Iida A, Takamatsu N, Hori H et al (2005) Reversion mutation of ib oculocutaneous albinism to wild-type pigmentation in medaka fish. Pigment Cell Res 18:382–384
-
(2005)
Pigment Cell Res
, vol.18
, pp. 382-384
-
-
Iida, A.1
Takamatsu, N.2
Hori, H.3
-
104
-
-
84887622325
-
Jumping the fine LINE between species: horizontal transfer of transposable elements in animals catalyses genome evolution
-
COI: 1:CAS:528:DC%2BC3sXhvVShsLjI, PID: 24003001
-
Ivancevic AM, Walsh AM, Kortschak RD, Adelson DL (2013) Jumping the fine LINE between species: horizontal transfer of transposable elements in animals catalyses genome evolution. BioEssays 35:1071–1082
-
(2013)
BioEssays
, vol.35
, pp. 1071-1082
-
-
Ivancevic, A.M.1
Walsh, A.M.2
Kortschak, R.D.3
Adelson, D.L.4
-
105
-
-
84878522936
-
The majority of primate-specific regulatory sequences are derived from transposable elements
-
COI: 1:CAS:528:DC%2BC3sXpsFylsLw%3D, PID: 23675311
-
Jacques PÉ, Jeyakani J, Bourque G (2013) The majority of primate-specific regulatory sequences are derived from transposable elements. PLoS Genet 9:e1003504
-
(2013)
PLoS Genet
, vol.9
, pp. e1003504
-
-
Jacques, P.É.1
Jeyakani, J.2
Bourque, G.3
-
106
-
-
84902682913
-
The RIDL hypothesis: transposable elements as functional domains of long noncoding RNAs
-
COI: 1:CAS:528:DC%2BC2cXhtFWgsrzO, PID: 24850885
-
Johnson R, Guigó R (2014) The RIDL hypothesis: transposable elements as functional domains of long noncoding RNAs. RNA 20:959–976
-
(2014)
RNA
, vol.20
, pp. 959-976
-
-
Johnson, R.1
Guigó, R.2
-
107
-
-
78649231644
-
Origins, evolution, and phenotypic impact of new genes
-
COI: 1:CAS:528:DC%2BC3cXht12jsrjL, PID: 20651121
-
Kaessmann H (2010) Origins, evolution, and phenotypic impact of new genes. Genome Res 20:1313–1326
-
(2010)
Genome Res
, vol.20
, pp. 1313-1326
-
-
Kaessmann, H.1
-
108
-
-
84875769579
-
The role of genes domesticated from LTR retrotransposons and retroviruses in mammals
-
Kaneko-Ishino T, Ishino F (2012) The role of genes domesticated from LTR retrotransposons and retroviruses in mammals. Front Microbiol 3:1–10
-
(2012)
Front Microbiol
, vol.3
, pp. 1-10
-
-
Kaneko-Ishino, T.1
Ishino, F.2
-
109
-
-
84971392079
-
Transposable element insertions in long intergenic non-coding RNA genes
-
Kannan S, Chernikova D, Rogozin IB et al (2015) Transposable element insertions in long intergenic non-coding RNA genes. Front Bioeng Biotechnol 3:1–9
-
(2015)
Front Bioeng Biotechnol
, vol.3
, pp. 1-9
-
-
Kannan, S.1
Chernikova, D.2
Rogozin, I.B.3
-
110
-
-
0035902449
-
Rolling-circle transposons in eukaryotes
-
COI: 1:CAS:528:DC%2BD3MXls1WitLo%3D, PID: 11447285
-
Kapitonov VV, Jurka J (2001) Rolling-circle transposons in eukaryotes. Proc Natl Acad Sci U S A 98:8714–8719
-
(2001)
Proc Natl Acad Sci U S A
, vol.98
, pp. 8714-8719
-
-
Kapitonov, V.V.1
Jurka, J.2
-
111
-
-
2542567200
-
Harbinger transposons and an ancient HARBI1 gene derived from a transposase
-
COI: 1:CAS:528:DC%2BD2cXkt1OgtL8%3D, PID: 15169610
-
Kapitonov VV, Jurka J (2004) Harbinger transposons and an ancient HARBI1 gene derived from a transposase. DNA Cell Biol 23:311–324
-
(2004)
DNA Cell Biol
, vol.23
, pp. 311-324
-
-
Kapitonov, V.V.1
Jurka, J.2
-
112
-
-
33645227457
-
Self-synthesizing DNA transposons in eukaryotes
-
COI: 1:CAS:528:DC%2BD28XjtlKisL0%3D, PID: 16537396
-
Kapitonov VV, Jurka J (2006) Self-synthesizing DNA transposons in eukaryotes. Proc Natl Acad Sci U S A 103:4540–4545
-
(2006)
Proc Natl Acad Sci U S A
, vol.103
, pp. 4540-4545
-
-
Kapitonov, V.V.1
Jurka, J.2
-
113
-
-
84928580279
-
Evolution of the RAG1-RAG2 locus: both proteins came from the same transposon
-
COI: 1:CAS:528:DC%2BC2MXpvFGkt7Y%3D
-
Kapitonov VV, Koonin EV (2015) Evolution of the RAG1-RAG2 locus: both proteins came from the same transposon. Biol Direct 10:1–8
-
(2015)
Biol Direct
, vol.10
, pp. 1-8
-
-
Kapitonov, V.V.1
Koonin, E.V.2
-
114
-
-
84921908289
-
Volatile evolution of long noncoding RNA repertoires: mechanisms and biological implications
-
COI: 1:CAS:528:DC%2BC2cXhsVOhtrzL, PID: 25218058
-
Kapusta A, Feschotte C (2014) Volatile evolution of long noncoding RNA repertoires: mechanisms and biological implications. Trends Genet 30:439–452
-
(2014)
Trends Genet
, vol.30
, pp. 439-452
-
-
Kapusta, A.1
Feschotte, C.2
-
115
-
-
84876864345
-
Transposable elements are major contributors to the origin, diversification, and regulation of vertebrate long noncoding RNAs
-
COI: 1:CAS:528:DC%2BC3sXnt1aqs7o%3D, PID: 23637635
-
Kapusta A, Kronenberg Z, Lynch VJ et al (2013) Transposable elements are major contributors to the origin, diversification, and regulation of vertebrate long noncoding RNAs. PLoS Genet 9:e1003470
-
(2013)
PLoS Genet
, vol.9
, pp. e1003470
-
-
Kapusta, A.1
Kronenberg, Z.2
Lynch, V.J.3
-
116
-
-
1542513556
-
Mobile elements: drivers of genome evolution
-
COI: 1:CAS:528:DC%2BD2cXhvFCntrk%3D, PID: 15016989
-
Kazazian HH Jr (2004) Mobile elements: drivers of genome evolution. Science 303:1626–1632
-
(2004)
Science
, vol.303
, pp. 1626-1632
-
-
Kazazian, H.H.1
-
117
-
-
84869881863
-
Transposable elements reveal a stem cell-specific class of long noncoding RNAs
-
PID: 23181609
-
Kelley D, Rinn J (2012) Transposable elements reveal a stem cell-specific class of long noncoding RNAs. Genome Biol 13:R107
-
(2012)
Genome Biol
, vol.13
, pp. R107
-
-
Kelley, D.1
Rinn, J.2
-
118
-
-
33745614284
-
Vertebrate DNA transposon as a natural mutator: the medaka fish Tol2 element contributes to genetic variation without recognizable traces
-
COI: 1:CAS:528:DC%2BD28XmsVOkurs%3D, PID: 16672286
-
Koga A, Iida A, Hori H, Shimada A, Shima A (2006) Vertebrate DNA transposon as a natural mutator: the medaka fish Tol2 element contributes to genetic variation without recognizable traces. Mol Biol Evol 23:1414–1419
-
(2006)
Mol Biol Evol
, vol.23
, pp. 1414-1419
-
-
Koga, A.1
Iida, A.2
Hori, H.3
Shimada, A.4
Shima, A.5
-
119
-
-
84876548744
-
Genesis and regulatory wiring of retroelement-derived domesticated genes: a phylogenomic perspective
-
PID: 23348003
-
Kokošar J, Kordiš D (2013) Genesis and regulatory wiring of retroelement-derived domesticated genes: a phylogenomic perspective. Mol Biol Evol 30:1015–1031
-
(2013)
Mol Biol Evol
, vol.30
, pp. 1015-1031
-
-
Kokošar, J.1
Kordiš, D.2
-
120
-
-
0345055836
-
The Bov-B lines found in Vipera ammodytes toxic PLA2 genes are widespread in snake genomes
-
PID: 9792174
-
Kordiš D, Gubensek F (1998) The Bov-B lines found in Vipera ammodytes toxic PLA2 genes are widespread in snake genomes. Toxicon 36:1585–1590
-
(1998)
Toxicon
, vol.36
, pp. 1585-1590
-
-
Kordiš, D.1
Gubensek, F.2
-
121
-
-
0344172788
-
Molecular evolution of Bov-B LINEs in vertebrates
-
PID: 10570995
-
Kordiš D, Gubensek F (1999) Molecular evolution of Bov-B LINEs in vertebrates. Gene 238:171–178
-
(1999)
Gene
, vol.238
, pp. 171-178
-
-
Kordiš, D.1
Gubensek, F.2
-
122
-
-
78649925356
-
Genome size and species diversification
-
PID: 22140283
-
Kraaijeveld K (2010) Genome size and species diversification. Evol Biol 37:227–233
-
(2010)
Evol Biol
, vol.37
, pp. 227-233
-
-
Kraaijeveld, K.1
-
123
-
-
25444517024
-
Alu-SINE exonization: en route to protein-coding function
-
COI: 1:CAS:528:DC%2BD2MXmslGjsro%3D, PID: 15901843
-
Krull M, Brosius J, Schmitz J (2005) Alu-SINE exonization: en route to protein-coding function. Mol Biol Evol 22:1702–1711
-
(2005)
Mol Biol Evol
, vol.22
, pp. 1702-1711
-
-
Krull, M.1
Brosius, J.2
Schmitz, J.3
-
124
-
-
34547643930
-
Functional persistence of exonized mammalian-wide interspersed repeat elements (MIRs)
-
COI: 1:CAS:528:DC%2BD2sXptVyhsL4%3D, PID: 17623809
-
Krull M, Petrusma M, Makalowski W, Brosius J, Schmitz J (2007) Functional persistence of exonized mammalian-wide interspersed repeat elements (MIRs). Genome Res 17:1139–1145
-
(2007)
Genome Res
, vol.17
, pp. 1139-1145
-
-
Krull, M.1
Petrusma, M.2
Makalowski, W.3
Brosius, J.4
Schmitz, J.5
-
125
-
-
77954100084
-
Transposable elements have rewired the core regulatory network of human embryonic stem cells
-
COI: 1:CAS:528:DC%2BC3cXntVSrsb4%3D, PID: 20526341
-
Kunarso G, Chia NY, Jeyakani J et al (2010) Transposable elements have rewired the core regulatory network of human embryonic stem cells. Nat Genet 42:631–634
-
(2010)
Nat Genet
, vol.42
, pp. 631-634
-
-
Kunarso, G.1
Chia, N.Y.2
Jeyakani, J.3
-
126
-
-
84864629645
-
Rapid turnover of long noncoding RNAs and the evolution of gene expression
-
COI: 1:CAS:528:DC%2BC38XhtFeisrnO, PID: 22844254
-
Kutter C, Watt S, Stefflova K et al (2012) Rapid turnover of long noncoding RNAs and the evolution of gene expression. PLoS Genet 8:e1002841
-
(2012)
PLoS Genet
, vol.8
, pp. e1002841
-
-
Kutter, C.1
Watt, S.2
Stefflova, K.3
-
127
-
-
0037791694
-
Functional analysis of the endogenous retroviral promoter of the human endothelin B receptor gene
-
COI: 1:CAS:528:DC%2BD3sXkvV2qu78%3D, PID: 12805445
-
Landry JR, Mager DL (2003) Functional analysis of the endogenous retroviral promoter of the human endothelin B receptor gene. J Virol 77:7459–7466
-
(2003)
J Virol
, vol.77
, pp. 7459-7466
-
-
Landry, J.R.1
Mager, D.L.2
-
128
-
-
0036854278
-
The Opitz syndrome gene mid1 is transcribed from a human endogenous retroviral promoter
-
COI: 1:CAS:528:DC%2BD38XovFOntbo%3D, PID: 12411602
-
Landry JR, Rouhi A, Medstrand P, Mager DL (2002) The Opitz syndrome gene mid1 is transcribed from a human endogenous retroviral promoter. Mol Biol Evol 19:1934–1942
-
(2002)
Mol Biol Evol
, vol.19
, pp. 1934-1942
-
-
Landry, J.R.1
Rouhi, A.2
Medstrand, P.3
Mager, D.L.4
-
129
-
-
33750461976
-
Population genetics models of competition between transposable element subfamilies
-
PID: 16888345
-
Le Rouzic A, Capy P (2006) Population genetics models of competition between transposable element subfamilies. Genetics 174:785–793
-
(2006)
Genetics
, vol.174
, pp. 785-793
-
-
Le Rouzic, A.1
Capy, P.2
-
130
-
-
0027751663
-
The C. elegans heterochronic gene lin-4 encodes small RNAs with antisense complementarity to lin-14
-
COI: 1:CAS:528:DyaK2cXpslGqtA%3D%3D, PID: 8252621
-
Lee RC (1993) The C. elegans heterochronic gene lin-4 encodes small RNAs with antisense complementarity to lin-14. Cell 75:843–854
-
(1993)
Cell
, vol.75
, pp. 843-854
-
-
Lee, R.C.1
-
131
-
-
29144525954
-
The SET domain protein Metnase mediates foreign DNA integration and links integration to nonhomologous end-joining repair
-
COI: 1:CAS:528:DC%2BD2MXhtlersr3J, PID: 16332963
-
Lee SH, Oshige M, Durant ST et al (2005) The SET domain protein Metnase mediates foreign DNA integration and links integration to nonhomologous end-joining repair. Proc Natl Acad Sci U S A 102:18075–18080
-
(2005)
Proc Natl Acad Sci U S A
, vol.102
, pp. 18075-18080
-
-
Lee, S.H.1
Oshige, M.2
Durant, S.T.3
-
132
-
-
55249096744
-
Phylogenetic analysis of mRNA polyadenylation sites reveals a role of transposable elements in evolution of the 3′-end of genes
-
COI: 1:CAS:528:DC%2BD1MXisFOmuw%3D%3D, PID: 18757892
-
Lee JY, Ji Z, Tian B (2008) Phylogenetic analysis of mRNA polyadenylation sites reveals a role of transposable elements in evolution of the 3′-end of genes. Nucl Acids Res 36:5581–5590
-
(2008)
Nucl Acids Res
, vol.36
, pp. 5581-5590
-
-
Lee, J.Y.1
Ji, Z.2
Tian, B.3
-
133
-
-
0038701605
-
The birth of an alternatively spliced exon: 3ʹ splice-site selection in Alu exons
-
COI: 1:CAS:528:DC%2BD3sXktFGkt7w%3D, PID: 12764196
-
Lev-Maor G, Sorek R, Shomron N, Ast G (2003) The birth of an alternatively spliced exon: 3ʹ splice-site selection in Alu exons. Science 300:1288–1291
-
(2003)
Science
, vol.300
, pp. 1288-1291
-
-
Lev-Maor, G.1
Sorek, R.2
Shomron, N.3
Ast, G.4
-
134
-
-
0033537716
-
Regulation of maternal behavior and offspring growth by paternally expressed Peg3
-
COI: 1:CAS:528:DyaK1MXitlOgt7Y%3D, PID: 10195900
-
Li L, Keverne EB, Aparicio SA, Ishino F, Barton SC, Surani MA (1999) Regulation of maternal behavior and offspring growth by paternally expressed Peg3. Science 284:330–333
-
(1999)
Science
, vol.284
, pp. 330-333
-
-
Li, L.1
Keverne, E.B.2
Aparicio, S.A.3
Ishino, F.4
Barton, S.C.5
Surani, M.A.6
-
135
-
-
66149120239
-
Large-scale analysis of exonized mammalian-wide interspersed repeats in primate genomes
-
COI: 1:CAS:528:DC%2BD1MXmtlWntLs%3D, PID: 19324900
-
Lin L, Jiang P, Shen S, Sato S, Davidson BL, Xing Y (2009) Large-scale analysis of exonized mammalian-wide interspersed repeats in primate genomes. Hum Mol Genet 18:2204–2214
-
(2009)
Hum Mol Genet
, vol.18
, pp. 2204-2214
-
-
Lin, L.1
Jiang, P.2
Shen, S.3
Sato, S.4
Davidson, B.L.5
Xing, Y.6
-
136
-
-
33846627783
-
The human SETMAR protein preserves most of the activities of the ancestral Hsmar1 transposase
-
PID: 17130240
-
Liu D, Bischerour J, Siddique A, Buisine N, Bigot Y, Chalmers R (2007) The human SETMAR protein preserves most of the activities of the ancestral Hsmar1 transposase. Mol Cell Biol 27:1125–1132
-
(2007)
Mol Cell Biol
, vol.27
, pp. 1125-1132
-
-
Liu, D.1
Bischerour, J.2
Siddique, A.3
Buisine, N.4
Bigot, Y.5
Chalmers, R.6
-
137
-
-
78649467088
-
Large intergenic non-coding RNA-RoR modulates reprogramming of human induced pluripotent stem cells
-
COI: 1:CAS:528:DC%2BC3cXhtl2jsbzE, PID: 21057500
-
Loewer S, Cabili MN, Guttman M et al (2010) Large intergenic non-coding RNA-RoR modulates reprogramming of human induced pluripotent stem cells. Nat Genet 42:1113–1117
-
(2010)
Nat Genet
, vol.42
, pp. 1113-1117
-
-
Loewer, S.1
Cabili, M.N.2
Guttman, M.3
-
138
-
-
84924388328
-
Analysis of 13 cell types reveals evidence for the expression of numerous novel primate- and tissue-specific microRNAs
-
COI: 1:CAS:528:DC%2BC2MXjtFemtbo%3D, PID: 25713380
-
Londin E, Loher P, Telonis AG et al (2015) Analysis of 13 cell types reveals evidence for the expression of numerous novel primate- and tissue-specific microRNAs. Proc Natl Acad Sci U S A 112:E1106–E1115
-
(2015)
Proc Natl Acad Sci U S A
, vol.112
, pp. E1106-E1115
-
-
Londin, E.1
Loher, P.2
Telonis, A.G.3
-
139
-
-
80155146885
-
Human piRNAs are under selection in Africans and repress transposable elements
-
COI: 1:CAS:528:DC%2BC3MXhtlyqsbvJ, PID: 21613236
-
Lukic S, Chen K (2011) Human piRNAs are under selection in Africans and repress transposable elements. Mol Biol Evol 28:3061–3067
-
(2011)
Mol Biol Evol
, vol.28
, pp. 3061-3067
-
-
Lukic, S.1
Chen, K.2
-
140
-
-
80055010534
-
Transposon-mediated rewiring of gene regulatory networks contributed to the evolution of pregnancy in mammals
-
COI: 1:CAS:528:DC%2BC3MXht1anurbO, PID: 21946353
-
Lynch VJ, Leclerc RD, May G, Wagner GP (2011) Transposon-mediated rewiring of gene regulatory networks contributed to the evolution of pregnancy in mammals. Nat Genet 43:1154–1159
-
(2011)
Nat Genet
, vol.43
, pp. 1154-1159
-
-
Lynch, V.J.1
Leclerc, R.D.2
May, G.3
Wagner, G.P.4
-
141
-
-
84922820231
-
Ancient transposable elements transformed the uterine regulatory landscape and transcriptome during the evolution of mammalian pregnancy
-
COI: 1:CAS:528:DC%2BC2MXhvVOqt7s%3D, PID: 25640180
-
Lynch VJ, Nnamani MC, Kapusta A et al (2015) Ancient transposable elements transformed the uterine regulatory landscape and transcriptome during the evolution of mammalian pregnancy. Cell Rep 10:551–561
-
(2015)
Cell Rep
, vol.10
, pp. 551-561
-
-
Lynch, V.J.1
Nnamani, M.C.2
Kapusta, A.3
-
142
-
-
84874780403
-
The vast, conserved mammalian lincRNome
-
COI: 1:CAS:528:DC%2BC3sXkt1Wmsrk%3D, PID: 23468607
-
Managadze D, Lobkovsky AE, Wolf YI, Shabalina SA, Rogozin IB, Koonin EV (2013) The vast, conserved mammalian lincRNome. PLoS Comput Biol 9:e1002917
-
(2013)
PLoS Comput Biol
, vol.9
, pp. e1002917
-
-
Managadze, D.1
Lobkovsky, A.E.2
Wolf, Y.I.3
Shabalina, S.A.4
Rogozin, I.B.5
Koonin, E.V.6
-
143
-
-
27844557002
-
Emergence of young human genes after a burst of retroposition in primates
-
COI: 1:CAS:528:DC%2BD2MXht1als77E
-
Marques AC, Dupanloup I, Vinckenbosch N, Reymond A, Kaessmann H (2005) Emergence of young human genes after a burst of retroposition in primates. PLoS Biol 3:1970–1979
-
(2005)
PLoS Biol
, vol.3
, pp. 1970-1979
-
-
Marques, A.C.1
Dupanloup, I.2
Vinckenbosch, N.3
Reymond, A.4
Kaessmann, H.5
-
144
-
-
45549083763
-
Functional diversification of duplicate genes through subcellular adaptation of encoded proteins
-
PID: 18336717
-
Marques AC, Vinckenbosch N, Brawand D, Kaessmann H (2008) Functional diversification of duplicate genes through subcellular adaptation of encoded proteins. Genome Biol 9:R54
-
(2008)
Genome Biol
, vol.9
, pp. R54
-
-
Marques, A.C.1
Vinckenbosch, N.2
Brawand, D.3
Kaessmann, H.4
-
145
-
-
77952303782
-
Location analysis for the estrogen receptor-α reveals binding to diverse ERE sequences and widespread binding within repetitive DNA elements
-
COI: 1:CAS:528:DC%2BC3cXkvVOrs74%3D, PID: 20047966
-
Mason CE, Shu FJ, Wang C et al (2010) Location analysis for the estrogen receptor-α reveals binding to diverse ERE sequences and widespread binding within repetitive DNA elements. Nucl Acids Res 38:2355–2368
-
(2010)
Nucl Acids Res
, vol.38
, pp. 2355-2368
-
-
Mason, C.E.1
Shu, F.J.2
Wang, C.3
-
146
-
-
33748750454
-
Mouse homologue of skin-specific retroviral-like aspartic protease involved in wrinkle formation
-
COI: 1:CAS:528:DC%2BD28XptlKmtLc%3D, PID: 16837463
-
Matsui T, Kinoshita-Ida Y, Hayashi-Kisumi F et al (2006) Mouse homologue of skin-specific retroviral-like aspartic protease involved in wrinkle formation. J Biol Chem 281:27512–27525
-
(2006)
J Biol Chem
, vol.281
, pp. 27512-27525
-
-
Matsui, T.1
Kinoshita-Ida, Y.2
Hayashi-Kisumi, F.3
-
147
-
-
79957895462
-
SASPase regulates stratum corneum hydration through profilaggrin-to-filaggrin processing
-
COI: 1:CAS:528:DC%2BC3MXnsFKrs7o%3D, PID: 21542132
-
Matsui T, Miyamoto K, Kubo A et al (2011) SASPase regulates stratum corneum hydration through profilaggrin-to-filaggrin processing. EMBO Mol Med 3:320–333
-
(2011)
EMBO Mol Med
, vol.3
, pp. 320-333
-
-
Matsui, T.1
Miyamoto, K.2
Kubo, A.3
-
148
-
-
77049292314
-
Controlling elements and the gene
-
COI: 1:STN:280:DyaG2s%2FotVansg%3D%3D, PID: 13433592
-
McClintock B (1956) Controlling elements and the gene. Cold Spring Harb Symp Quant Biol 21:197–216
-
(1956)
Cold Spring Harb Symp Quant Biol
, vol.21
, pp. 197-216
-
-
McClintock, B.1
-
149
-
-
37249013294
-
Genomic instability within centromeres of interspecific marsupial hybrids
-
COI: 1:CAS:528:DC%2BD1cXhtlCjtrc%3D, PID: 18073443
-
Metcalfe CJ, Bulazel KV, Ferreri GC et al (2007) Genomic instability within centromeres of interspecific marsupial hybrids. Genetics 177:2507–2517
-
(2007)
Genetics
, vol.177
, pp. 2507-2517
-
-
Metcalfe, C.J.1
Bulazel, K.V.2
Ferreri, G.C.3
-
150
-
-
84867761085
-
Evolution of the Australian lungfish (Neoceratodus forsteri) genome: a major role for CR1 and L2 LINE elements
-
COI: 1:CAS:528:DC%2BC38XhsFCru7jN, PID: 22734051
-
Metcalfe CJ, Filee J, Germon I, Joss J, Casane D (2012) Evolution of the Australian lungfish (Neoceratodus forsteri) genome: a major role for CR1 and L2 LINE elements. Mol Biol Evol 29:3529–3539
-
(2012)
Mol Biol Evol
, vol.29
, pp. 3529-3539
-
-
Metcalfe, C.J.1
Filee, J.2
Germon, I.3
Joss, J.4
Casane, D.5
-
151
-
-
84871974893
-
Birth and expression evolution of mammalian microRNA genes
-
COI: 1:CAS:528:DC%2BC3sXnvV2ltQ%3D%3D, PID: 23034410
-
Meunier J, Lemoine F, Soumillon M et al (2013) Birth and expression evolution of mammalian microRNA genes. Genome Res 23:34–45
-
(2013)
Genome Res
, vol.23
, pp. 34-45
-
-
Meunier, J.1
Lemoine, F.2
Soumillon, M.3
-
152
-
-
0342545919
-
Syncytin is a captive retroviral envelope protein involved in human placental morphogenesis
-
COI: 1:CAS:528:DC%2BD3cXhsVWitLg%3D, PID: 10693809
-
Mi S, Lee X, Li X et al (2000) Syncytin is a captive retroviral envelope protein involved in human placental morphogenesis. Nature 403:785–789
-
(2000)
Nature
, vol.403
, pp. 785-789
-
-
Mi, S.1
Lee, X.2
Li, X.3
-
153
-
-
84868266826
-
A fish-specific transposable element shapes the repertoire of p53 target genes in zebrafish
-
COI: 1:CAS:528:DC%2BC38XhslWjs7nN, PID: 23118857
-
Micale L, Loviglio MN, Manzoni M et al (2012) A fish-specific transposable element shapes the repertoire of p53 target genes in zebrafish. PLoS One 7:e46642
-
(2012)
PLoS One
, vol.7
, pp. e46642
-
-
Micale, L.1
Loviglio, M.N.2
Manzoni, M.3
-
154
-
-
0027478362
-
The emergence of new DNA repeats and the divergence of primates
-
COI: 1:CAS:528:DyaK3sXhs1agsrs%3D, PID: 8446601
-
Minghetti PP, Dugaiczyk A (1993) The emergence of new DNA repeats and the divergence of primates. Proc Natl Acad Sci U S A 90:1872–1876
-
(1993)
Proc Natl Acad Sci U S A
, vol.90
, pp. 1872-1876
-
-
Minghetti, P.P.1
Dugaiczyk, A.2
-
155
-
-
33749389932
-
Comparative genomics modeling of the NRSF/REST repressor network: from single conserved sites to genome-wide repertoire
-
COI: 1:CAS:528:DC%2BD28XhtVOmtrnL, PID: 16963704
-
Mortazavi A, Leeper Thompson EC, Garcia ST, Myers RM, Wold B (2006) Comparative genomics modeling of the NRSF/REST repressor network: from single conserved sites to genome-wide repertoire. Genome Res 16:1208–1221
-
(2006)
Genome Res
, vol.16
, pp. 1208-1221
-
-
Mortazavi, A.1
Leeper Thompson, E.C.2
Garcia, S.T.3
Myers, R.M.4
Wold, B.5
-
156
-
-
84865286053
-
A SINE-derived element constitutes a unique modular enhancer for mammalian diencephalic Fgf8
-
COI: 1:CAS:528:DC%2BC38Xht1Oit7rO, PID: 22937095
-
Nakanishi A, Kobayashi N, Suzuki-Hirano A et al (2012) A SINE-derived element constitutes a unique modular enhancer for mammalian diencephalic Fgf8. PLoS One 7:e43785
-
(2012)
PLoS One
, vol.7
, pp. e43785
-
-
Nakanishi, A.1
Kobayashi, N.2
Suzuki-Hirano, A.3
-
157
-
-
84895908120
-
The evolution of lncRNA repertoires and expression patterns in tetrapods
-
COI: 1:CAS:528:DC%2BC2cXhsFemtLg%3D, PID: 24463510
-
Necsulea A, Soumillon M, Warnefors M et al (2014) The evolution of lncRNA repertoires and expression patterns in tetrapods. Nature 505:635–640
-
(2014)
Nature
, vol.505
, pp. 635-640
-
-
Necsulea, A.1
Soumillon, M.2
Warnefors, M.3
-
158
-
-
84925778794
-
A family of transposable elements co-opted into developmental enhancers in the mouse neocortex
-
COI: 1:CAS:528:DC%2BC2MXhtF2itLzK, PID: 25806706
-
Notwell JH, Chung T, Heavner W, Bejerano G (2015) A family of transposable elements co-opted into developmental enhancers in the mouse neocortex. Nat Commun 6:6644
-
(2015)
Nat Commun
, vol.6
, pp. 6644
-
-
Notwell, J.H.1
Chung, T.2
Heavner, W.3
Bejerano, G.4
-
159
-
-
77958130019
-
Rapid sequence and expression divergence suggest selection for novel function in primate-specific KRAB-ZNF genes
-
COI: 1:CAS:528:DC%2BC3cXhtlShu7rF, PID: 20573777
-
Nowick K, Hamilton AT, Zhang H, Stubbs L (2010) Rapid sequence and expression divergence suggest selection for novel function in primate-specific KRAB-ZNF genes. Mol Biol Evol 27:2606–2617
-
(2010)
Mol Biol Evol
, vol.27
, pp. 2606-2617
-
-
Nowick, K.1
Hamilton, A.T.2
Zhang, H.3
Stubbs, L.4
-
160
-
-
0009673698
-
Undermethylation associated with retroelement activation and chromosome remodelling in an interspecific mammalian hybrid
-
PID: 9590690
-
O’Neill RJ, O’Neill MJ, Graves JA (1998) Undermethylation associated with retroelement activation and chromosome remodelling in an interspecific mammalian hybrid. Nature 393:68–72
-
(1998)
Nature
, vol.393
, pp. 68-72
-
-
O’Neill, R.J.1
O’Neill, M.J.2
Graves, J.A.3
-
161
-
-
29444434486
-
Deletion of Peg10, an imprinted gene acquired from a retrotransposon, causes early embryonic lethality
-
COI: 1:CAS:528:DC%2BD2MXhtlCmtr%2FJ, PID: 16341224
-
Ono R, Nakamura K, Inoue K et al (2006) Deletion of Peg10, an imprinted gene acquired from a retrotransposon, causes early embryonic lethality. Nat Genet 38:101–106
-
(2006)
Nat Genet
, vol.38
, pp. 101-106
-
-
Ono, R.1
Nakamura, K.2
Inoue, K.3
-
162
-
-
63449122253
-
Burst of young retrogenes and independent retrogene formation in mammals
-
PID: 19325906
-
Pan D, Zhang L (2009) Burst of young retrogenes and independent retrogene formation in mammals. PLoS One 4:e5040
-
(2009)
PLoS One
, vol.4
, pp. e5040
-
-
Pan, D.1
Zhang, L.2
-
163
-
-
68049137925
-
Cloning, characterization, and expression analysis of the novel acetyltransferase retrogene Ard1b in the mouse
-
COI: 1:CAS:528:DC%2BD1MXptVaitb0%3D, PID: 19246321
-
Pang ALY, Peacock S, Johnson W, Bear DH, Rennert OM, Chan WY (2009) Cloning, characterization, and expression analysis of the novel acetyltransferase retrogene Ard1b in the mouse. Biol Reprod 81:302–309
-
(2009)
Biol Reprod
, vol.81
, pp. 302-309
-
-
Pang, A.L.Y.1
Peacock, S.2
Johnson, W.3
Bear, D.H.4
Rennert, O.M.5
Chan, W.Y.6
-
164
-
-
34748895999
-
Diet and the evolution of human amylase gene copy number variation
-
COI: 1:CAS:528:DC%2BD2sXhtV2isL7J, PID: 17828263
-
Perry GH, Dominy NJ, Claw KG et al (2007) Diet and the evolution of human amylase gene copy number variation. Nat Genet 39:1256–1260
-
(2007)
Nat Genet
, vol.39
, pp. 1256-1260
-
-
Perry, G.H.1
Dominy, N.J.2
Claw, K.G.3
-
165
-
-
9144249570
-
The LTR enhancer of ERV-9 human endogenous retrovirus is active in oocytes and progenitor cells in transgenic zebrafish and humans
-
COI: 1:CAS:528:DC%2BD2cXhsVWhu70%3D, PID: 14718667
-
Pi W, Yang Z, Wang J et al (2004) The LTR enhancer of ERV-9 human endogenous retrovirus is active in oocytes and progenitor cells in transgenic zebrafish and humans. Proc Natl Acad Sci U S A 101:805–810
-
(2004)
Proc Natl Acad Sci U S A
, vol.101
, pp. 805-810
-
-
Pi, W.1
Yang, Z.2
Wang, J.3
-
166
-
-
34250776711
-
A family of human microRNA genes from miniature inverted-repeat transposable elements
-
PID: 17301878
-
Piriyapongsa J, Jordan IK (2007) A family of human microRNA genes from miniature inverted-repeat transposable elements. PLoS One 2:e203
-
(2007)
PLoS One
, vol.2
, pp. e203
-
-
Piriyapongsa, J.1
Jordan, I.K.2
-
167
-
-
34250729886
-
Origin and evolution of human microRNAs from transposable elements
-
COI: 1:CAS:528:DC%2BD2sXovVOqs7k%3D, PID: 17435244
-
Piriyapongsa J, Mariño-Ramírez L, Jordan IK (2007a) Origin and evolution of human microRNAs from transposable elements. Genetics 176:1323–1337
-
(2007)
Genetics
, vol.176
, pp. 1323-1337
-
-
Piriyapongsa, J.1
Mariño-Ramírez, L.2
Jordan, I.K.3
-
169
-
-
80053190889
-
Tracking the ancestry of a deeply conserved eumetazoan SINE domain
-
COI: 1:CAS:528:DC%2BC3MXht1eiu7vP, PID: 21512106
-
Piskurek O, Jackson DJ (2011) Tracking the ancestry of a deeply conserved eumetazoan SINE domain. Mol Biol Evol 28:2727–2730
-
(2011)
Mol Biol Evol
, vol.28
, pp. 2727-2730
-
-
Piskurek, O.1
Jackson, D.J.2
-
170
-
-
33750496896
-
Arc/Arg3.1 is essential for the consolidation of synaptic plasticity and memories
-
COI: 1:CAS:528:DC%2BD28Xht1KhtbjE, PID: 17088210
-
Plath N, Ohana O, Dammermann B et al (2006) Arc/Arg3.1 is essential for the consolidation of synaptic plasticity and memories. Neuron 52:437–444
-
(2006)
Neuron
, vol.52
, pp. 437-444
-
-
Plath, N.1
Ohana, O.2
Dammermann, B.3
-
171
-
-
43249118306
-
Chromosomal gene movements reflect the recent origin and biology of therian sex chromosomes
-
COI: 1:CAS:528:DC%2BD1cXlvFCitL0%3D
-
Potrzebowski L, Vinckenbosch N, Marques AC, Chalmel F, Jégou B, Kaessmann H (2008) Chromosomal gene movements reflect the recent origin and biology of therian sex chromosomes. PLoS Biol 6:709–716
-
(2008)
PLoS Biol
, vol.6
, pp. 709-716
-
-
Potrzebowski, L.1
Vinckenbosch, N.2
Marques, A.C.3
Chalmel, F.4
Jégou, B.5
Kaessmann, H.6
-
172
-
-
72449140662
-
The emergence of new genes on the young therian X
-
COI: 1:CAS:528:DC%2BD1MXhs1WksrfK, PID: 19931933
-
Potrzebowski L, Vinckenbosch N, Kaessmann H (2010) The emergence of new genes on the young therian X. Trends Genet 26:1–4
-
(2010)
Trends Genet
, vol.26
, pp. 1-4
-
-
Potrzebowski, L.1
Vinckenbosch, N.2
Kaessmann, H.3
-
173
-
-
84938633193
-
The role of transposable elements in the origin and evolution of microRNAs in human
-
PID: 26115450
-
Qin S, Jin P, Zhou X, Chen L, Ma F (2015) The role of transposable elements in the origin and evolution of microRNAs in human. Plos One 10:e0131365
-
(2015)
Plos One
, vol.10
, pp. e0131365
-
-
Qin, S.1
Jin, P.2
Zhou, X.3
Chen, L.4
Ma, F.5
-
174
-
-
43149103661
-
Multiple waves of recent DNA transposon activity in the bat, Myotis lucifugus
-
COI: 1:CAS:528:DC%2BD1cXlslChs7g%3D, PID: 18340040
-
Ray DA, Feschotte C, Pagan HJT et al (2008) Multiple waves of recent DNA transposon activity in the bat, Myotis lucifugus. Genome Res 18:717–728
-
(2008)
Genome Res
, vol.18
, pp. 717-728
-
-
Ray, D.A.1
Feschotte, C.2
Pagan, H.J.T.3
-
175
-
-
84867050577
-
Transposable elements: an abundant and natural source of regulatory sequences for host genes
-
COI: 1:CAS:528:DC%2BC38XhvVyktbnN, PID: 22905872
-
Rebollo R, Romanish MT, Mager DL (2012) Transposable elements: an abundant and natural source of regulatory sequences for host genes. Annu Rev Genet 46:21–42
-
(2012)
Annu Rev Genet
, vol.46
, pp. 21-42
-
-
Rebollo, R.1
Romanish, M.T.2
Mager, D.L.3
-
176
-
-
79952261267
-
Dioxin receptor and SLUG transcription factors regulate the insulator activity of B1 SINE retrotransposons via an RNA polymerase switch
-
PID: 21324874
-
Román AC, González-Rico FJ, Moltó E et al (2011) Dioxin receptor and SLUG transcription factors regulate the insulator activity of B1 SINE retrotransposons via an RNA polymerase switch. Genome Res 21:422–432
-
(2011)
Genome Res
, vol.21
, pp. 422-432
-
-
Román, A.C.1
González-Rico, F.J.2
Moltó, E.3
-
178
-
-
0025282303
-
Retroviral and pseudogene insertion sites reveal the lineage of human salivary and pancreatic amylase genes from a single gene during primate evolution
-
COI: 1:CAS:528:DyaK3cXkvFantrs%3D, PID: 1692956
-
Samuelson LC, Wiebauer K, Snow CM, Meisler MH (1990) Retroviral and pseudogene insertion sites reveal the lineage of human salivary and pancreatic amylase genes from a single gene during primate evolution. Mol Cell Biol 10:2513–2520
-
(1990)
Mol Cell Biol
, vol.10
, pp. 2513-2520
-
-
Samuelson, L.C.1
Wiebauer, K.2
Snow, C.M.3
Meisler, M.H.4
-
179
-
-
35948981635
-
Ancient exaptation of a CORE-SINE retroposon into a highly conserved mammalian neuronal enhancer of the proopiomelanocortin gene
-
COI: 1:CAS:528:DC%2BD2sXhsVOgu7fF, PID: 17922573
-
Santangelo AM, de Souza FSJ, Franchini LF, Bumaschny VF, Low MJ, Rubinstein M (2007) Ancient exaptation of a CORE-SINE retroposon into a highly conserved mammalian neuronal enhancer of the proopiomelanocortin gene. PLoS Genet 3:1813–1826
-
(2007)
PLoS Genet
, vol.3
, pp. 1813-1826
-
-
Santangelo, A.M.1
de Souza, F.S.J.2
Franchini, L.F.3
Bumaschny, V.F.4
Low, M.J.5
Rubinstein, M.6
-
180
-
-
84871215627
-
HERV-H RNA is abundant in human embryonic stem cells and a precise marker for pluripotency
-
COI: 1:CAS:528:DC%2BC3sXivVOrtL8%3D, PID: 23253934
-
Santoni FA, Guerra J, Luban J (2012) HERV-H RNA is abundant in human embryonic stem cells and a precise marker for pluripotency. Retrovirology 9:111
-
(2012)
Retrovirology
, vol.9
, pp. 111
-
-
Santoni, F.A.1
Guerra, J.2
Luban, J.3
-
181
-
-
84911454495
-
The evolution of cichlid fish egg-spots is linked with a cis-regulatory change
-
COI: 1:CAS:528:DC%2BC2cXitVaksLfP, PID: 25296686
-
Santos ME, Braasch I, Boileau N et al (2014) The evolution of cichlid fish egg-spots is linked with a cis-regulatory change. Nat Commun 5:5149
-
(2014)
Nat Commun
, vol.5
, pp. 5149
-
-
Santos, M.E.1
Braasch, I.2
Boileau, N.3
-
182
-
-
41949093041
-
Possible involvement of SINEs in mammalian-specific brain formation
-
COI: 1:CAS:528:DC%2BD1cXkt1ehsr4%3D, PID: 18334644
-
Sasaki T, Nishihara H, Hirakawa M et al (2008) Possible involvement of SINEs in mammalian-specific brain formation. Proc Natl Acad Sci U S A 105:4220–4225
-
(2008)
Proc Natl Acad Sci U S A
, vol.105
, pp. 4220-4225
-
-
Sasaki, T.1
Nishihara, H.2
Hirakawa, M.3
-
183
-
-
33847665108
-
Human polymorphism at microRNAs and microRNA target sites
-
COI: 1:CAS:528:DC%2BD2sXjtVWltrs%3D, PID: 17360642
-
Saunders MA, Liang H, Li WH (2007) Human polymorphism at microRNAs and microRNA target sites. Proc Natl Acad Sci U S A 104:3300–3305
-
(2007)
Proc Natl Acad Sci U S A
, vol.104
, pp. 3300-3305
-
-
Saunders, M.A.1
Liang, H.2
Li, W.H.3
-
184
-
-
77955658052
-
Promiscuous DNA: horizontal transfer of transposable elements and why it matters for eukaryotic evolution
-
PID: 20591532
-
Schaack S, Gilbert C, Feschotte C (2010) Promiscuous DNA: horizontal transfer of transposable elements and why it matters for eukaryotic evolution. Trends Ecol Evol 25:537–546
-
(2010)
Trends Ecol Evol
, vol.25
, pp. 537-546
-
-
Schaack, S.1
Gilbert, C.2
Feschotte, C.3
-
185
-
-
0032710999
-
Melanoma loss-of-function mutants in Xiphophorus caused by Xmrk-oncogene deletion and gene disruption by a transposable element
-
COI: 1:CAS:528:DyaK1MXnslSjsbY%3D, PID: 10545466
-
Schartl M, Hornung U, Gutbrod H, Volff JN, Wittbrodt J (1999) Melanoma loss-of-function mutants in Xiphophorus caused by Xmrk-oncogene deletion and gene disruption by a transposable element. Genetics 153:1385–1394
-
(1999)
Genetics
, vol.153
, pp. 1385-1394
-
-
Schartl, M.1
Hornung, U.2
Gutbrod, H.3
Volff, J.N.4
Wittbrodt, J.5
-
186
-
-
80355122714
-
V(D)J recombination: mechanisms of initiation
-
COI: 1:CAS:528:DC%2BC3MXhs1ahtr3I, PID: 21854230
-
Schatz DG, Swanson PC (2011) V(D)J recombination: mechanisms of initiation. Annu Rev Genet 45:167–202
-
(2011)
Annu Rev Genet
, vol.45
, pp. 167-202
-
-
Schatz, D.G.1
Swanson, P.C.2
-
187
-
-
84863393570
-
Waves of retrotransposon expansion remodel genome organization and CTCF binding in multiple mammalian lineages
-
COI: 1:CAS:528:DC%2BC38XhtFKgtr4%3D, PID: 22244452
-
Schmidt D, Schwalie PC, Wilson MD et al (2012) Waves of retrotransposon expansion remodel genome organization and CTCF binding in multiple mammalian lineages. Cell 148:335–348
-
(2012)
Cell
, vol.148
, pp. 335-348
-
-
Schmidt, D.1
Schwalie, P.C.2
Wilson, M.D.3
-
188
-
-
80053564717
-
Exonization of transposed elements: a challenge and opportunity for evolution
-
COI: 1:CAS:528:DC%2BC3MXht1Gqs7zN, PID: 21787833
-
Schmitz J, Brosius J (2011) Exonization of transposed elements: a challenge and opportunity for evolution. Biochimie 93:1928–1934
-
(2011)
Biochimie
, vol.93
, pp. 1928-1934
-
-
Schmitz, J.1
Brosius, J.2
-
189
-
-
27344449164
-
The human PNMA family: novel neuronal proteins implicated in paraneoplastic neurological disease
-
PID: 16214224
-
Schüller M, Jenne D, Voltz R (2005) The human PNMA family: novel neuronal proteins implicated in paraneoplastic neurological disease. J Neuroimmunol 169:172–176
-
(2005)
J Neuroimmunol
, vol.169
, pp. 172-176
-
-
Schüller, M.1
Jenne, D.2
Voltz, R.3
-
190
-
-
0031746566
-
Structure and phylogenetic analysis of an endogenous retrovirus inserted into the human growth factor gene pleiotrophin
-
COI: 1:CAS:528:DyaK1cXjvFGltLs%3D, PID: 9621070
-
Schulte AM, Wellstein A (1998) Structure and phylogenetic analysis of an endogenous retrovirus inserted into the human growth factor gene pleiotrophin. J Virol 72:6065–6072
-
(1998)
J Virol
, vol.72
, pp. 6065-6072
-
-
Schulte, A.M.1
Wellstein, A.2
-
191
-
-
38649091005
-
Role of retrotransposon-derived imprinted gene, Rtl1, in the feto-maternal interface of mouse placenta
-
COI: 1:CAS:528:DC%2BD1cXhsVSjsbo%3D, PID: 18176565
-
Sekita Y, Wagatsuma H, Nakamura K et al (2008) Role of retrotransposon-derived imprinted gene, Rtl1, in the feto-maternal interface of mouse placenta. Nat Genet 40:243–248
-
(2008)
Nat Genet
, vol.40
, pp. 243-248
-
-
Sekita, Y.1
Wagatsuma, H.2
Nakamura, K.3
-
192
-
-
34748869000
-
Comparative analysis of transposed element insertion within human and mouse genomes reveals Alu’s unique role in shaping the human transcriptome
-
PID: 17594509
-
Sela N, Mersch B, Gal-Mark N, Lev-Maor G, Hotz-Wagenblatt A, Ast G (2007) Comparative analysis of transposed element insertion within human and mouse genomes reveals Alu’s unique role in shaping the human transcriptome. Genome Biol 8:R127
-
(2007)
Genome Biol
, vol.8
, pp. R127
-
-
Sela, N.1
Mersch, B.2
Gal-Mark, N.3
Lev-Maor, G.4
Hotz-Wagenblatt, A.5
Ast, G.6
-
193
-
-
77956222970
-
Characteristics of transposable element exonization within human and mouse
-
PID: 20532223
-
Sela N, Mersch B, Hotz-Wagenblatt A, Ast G (2010) Characteristics of transposable element exonization within human and mouse. PLoS One 5:e10907
-
(2010)
PLoS One
, vol.5
, pp. e10907
-
-
Sela, N.1
Mersch, B.2
Hotz-Wagenblatt, A.3
Ast, G.4
-
194
-
-
79952615527
-
Widespread establishment and regulatory impact of Alu exons in human genes
-
COI: 1:CAS:528:DC%2BC3MXitl2ht7k%3D, PID: 21282640
-
Shen S, Lin L, Cai JJ et al (2011) Widespread establishment and regulatory impact of Alu exons in human genes. Proc Natl Acad Sci U S A 108:2837–2842
-
(2011)
Proc Natl Acad Sci U S A
, vol.108
, pp. 2837-2842
-
-
Shen, S.1
Lin, L.2
Cai, J.J.3
-
195
-
-
3843093872
-
From “junk” to gene: curriculum vitae of a primate receptor isoform gene
-
COI: 1:CAS:528:DC%2BD2cXmt1CitLo%3D, PID: 15328599
-
Singer SS, Männel DN, Hehlgans T, Brosius J, Schmitz J (2004) From “junk” to gene: curriculum vitae of a primate receptor isoform gene. J Mol Biol 341:883–886
-
(2004)
J Mol Biol
, vol.341
, pp. 883-886
-
-
Singer, S.S.1
Männel, D.N.2
Hehlgans, T.3
Brosius, J.4
Schmitz, J.5
-
196
-
-
62349089758
-
Molecular domestication of transposable elements: from detrimental parasites to useful host genes
-
COI: 1:CAS:528:DC%2BD1MXjtFKqsbc%3D, PID: 19132291
-
Sinzelle L, Izsvák Z, Ivics Z (2009) Molecular domestication of transposable elements: from detrimental parasites to useful host genes. Cell Mol Life Sci 66:1073–1093
-
(2009)
Cell Mol Life Sci
, vol.66
, pp. 1073-1093
-
-
Sinzelle, L.1
Izsvák, Z.2
Ivics, Z.3
-
197
-
-
19444367079
-
Mammalian microRNAs derived from genomic repeats
-
COI: 1:CAS:528:DC%2BD2MXks1Cmsb4%3D, PID: 15922829
-
Smalheiser NR, Torvik VI (2005) Mammalian microRNAs derived from genomic repeats. Trends Genet 21:322–326
-
(2005)
Trends Genet
, vol.21
, pp. 322-326
-
-
Smalheiser, N.R.1
Torvik, V.I.2
-
198
-
-
84897490429
-
Functional microRNAs and target sites are created by lineage-specific transposition
-
COI: 1:CAS:528:DC%2BC2cXmtVemsrw%3D, PID: 24234653
-
Spengler RM, Oakley CK, Davidson BL (2014) Functional microRNAs and target sites are created by lineage-specific transposition. Hum Mol Genet 23:1783–1793
-
(2014)
Hum Mol Genet
, vol.23
, pp. 1783-1793
-
-
Spengler, R.M.1
Oakley, C.K.2
Davidson, B.L.3
-
199
-
-
84928761213
-
The landscape of long noncoding RNA classification
-
COI: 1:CAS:528:DC%2BC2MXlsVKqsr8%3D, PID: 25869999
-
St. Laurent G, Wahlestedt C, Kapranov P (2015) The landscape of long noncoding RNA classification. Trends Genet 31:239–251
-
(2015)
Trends Genet
, vol.31
, pp. 239-251
-
-
St. Laurent, G.1
Wahlestedt, C.2
Kapranov, P.3
-
200
-
-
27744555914
-
Y chromosomes: born to be destroyed
-
COI: 1:CAS:528:DC%2BD2MXhtFKqtb3M, PID: 16163733
-
Steinemann S, Steinemann M (2005) Y chromosomes: born to be destroyed. BioEssays 27:1076–1083
-
(2005)
BioEssays
, vol.27
, pp. 1076-1083
-
-
Steinemann, S.1
Steinemann, M.2
-
201
-
-
84865806641
-
LTR retrotransposons contribute to genomic gigantism in plethodontid salamanders
-
PID: 22200636
-
Sun C, Shepard DB, Chong RA et al (2012) LTR retrotransposons contribute to genomic gigantism in plethodontid salamanders. Genome Biol Evol 4:168–183
-
(2012)
Genome Biol Evol
, vol.4
, pp. 168-183
-
-
Sun, C.1
Shepard, D.B.2
Chong, R.A.3
-
202
-
-
84911936991
-
Widespread contribution of transposable elements to the innovation of gene regulatory networks
-
COI: 1:CAS:528:DC%2BC2cXitVOls77L, PID: 25319995
-
Sundaram V, Cheng Y, Ma Z et al (2014) Widespread contribution of transposable elements to the innovation of gene regulatory networks. Genome Res 24:1963–1976
-
(2014)
Genome Res
, vol.24
, pp. 1963-1976
-
-
Sundaram, V.1
Cheng, Y.2
Ma, Z.3
-
203
-
-
84928004436
-
Repeated horizontal transfers of four DNA transposons in invertebrates and bats
-
PID: 25606061
-
Tang Z, Zhang HH, Huang K, Zhang XG, Han MJ, Zhang Z (2015) Repeated horizontal transfers of four DNA transposons in invertebrates and bats. Mob DNA 6:3
-
(2015)
Mob DNA
, vol.6
, pp. 3
-
-
Tang, Z.1
Zhang, H.H.2
Huang, K.3
Zhang, X.G.4
Han, M.J.5
Zhang, Z.6
-
204
-
-
82955188747
-
A mammalian conserved element derived from SINE displays enhancer properties recapitulating satb2 expression in early-born callosal projection neurons
-
COI: 1:CAS:528:DC%2BC3MXhs1Oqur3N, PID: 22174821
-
Tashiro K, Teissier A, Kobayashi N et al (2011) A mammalian conserved element derived from SINE displays enhancer properties recapitulating satb2 expression in early-born callosal projection neurons. PLoS One 6:e28497
-
(2011)
PLoS One
, vol.6
, pp. e28497
-
-
Tashiro, K.1
Teissier, A.2
Kobayashi, N.3
-
205
-
-
77958487981
-
Pervasive horizontal transfer of rolling-circle transposons among animals
-
PID: 20693155
-
Thomas J, Schaack S, Pritham EJ (2010) Pervasive horizontal transfer of rolling-circle transposons among animals. Genome Biol Evol 2:656–664
-
(2010)
Genome Biol Evol
, vol.2
, pp. 656-664
-
-
Thomas, J.1
Schaack, S.2
Pritham, E.J.3
-
206
-
-
84929996202
-
Rolling-circle transposons catalyze genomic innovation in a mammalian lineage
-
COI: 1:CAS:528:DC%2BC2cXitFGiu7%2FE, PID: 25223768
-
Thomas J, Phillips CD, Baker RJ, Pritham EJ (2014) Rolling-circle transposons catalyze genomic innovation in a mammalian lineage. Genome Biol Evol 6:2595–2610
-
(2014)
Genome Biol Evol
, vol.6
, pp. 2595-2610
-
-
Thomas, J.1
Phillips, C.D.2
Baker, R.J.3
Pritham, E.J.4
-
207
-
-
67650869803
-
The role of transposable elements in the regulation of IFN-λ1 gene expression
-
COI: 1:CAS:528:DC%2BD1MXptVKjsbg%3D, PID: 19570999
-
Thomson SJP, Goh FG, Banks H et al (2009) The role of transposable elements in the regulation of IFN-λ1 gene expression. Proc Natl Acad Sci U S A 106:11564–11569
-
(2009)
Proc Natl Acad Sci U S A
, vol.106
, pp. 11564-11569
-
-
Thomson, S.J.P.1
Goh, F.G.2
Banks, H.3
-
208
-
-
0026668650
-
Endogenous retroviral sequences are required for tissue-specific expression of a human salivary amylase gene
-
COI: 1:CAS:528:DyaK38XlsVCktr4%3D, PID: 1379564
-
Ting CN, Rosenberg MP, Snow CM, Samuelson LC, Meisler MH (1992) Endogenous retroviral sequences are required for tissue-specific expression of a human salivary amylase gene. Genes Dev 6:1457–1465
-
(1992)
Genes Dev
, vol.6
, pp. 1457-1465
-
-
Ting, C.N.1
Rosenberg, M.P.2
Snow, C.M.3
Samuelson, L.C.4
Meisler, M.H.5
-
209
-
-
3342951462
-
Isolation and characterisation of GTF2IRD2, a novel fusion gene and member of the TFII-I family of transcription factors, deleted in Williams-Beuren syndrome
-
COI: 1:CAS:528:DC%2BD2cXltF2htbc%3D, PID: 15100712
-
Tipney HJ, Hinsley TA, Brass A, Metcalfe K, Donnai D, Tassabehji M (2004) Isolation and characterisation of GTF2IRD2, a novel fusion gene and member of the TFII-I family of transcription factors, deleted in Williams-Beuren syndrome. Eur J Hum Genet 12:551–560
-
(2004)
Eur J Hum Genet
, vol.12
, pp. 551-560
-
-
Tipney, H.J.1
Hinsley, T.A.2
Brass, A.3
Metcalfe, K.4
Donnai, D.5
Tassabehji, M.6
-
210
-
-
0035863861
-
CENP-B is not critical for meiotic chromosome segregation in male mice
-
COI: 1:CAS:528:DC%2BD3MXosFOjur8%3D, PID: 11719105
-
Tomascik-Cheeseman L, Marchetti F, Lowe X et al (2002) CENP-B is not critical for meiotic chromosome segregation in male mice. Mutat Res 513:197–203
-
(2002)
Mutat Res
, vol.513
, pp. 197-203
-
-
Tomascik-Cheeseman, L.1
Marchetti, F.2
Lowe, X.3
-
211
-
-
0021127698
-
Alu sequences are processed 7SL RNA genes
-
COI: 1:CAS:528:DyaL2MXktVymtw%3D%3D, PID: 6209580
-
Ullu E, Tschudi C (1984) Alu sequences are processed 7SL RNA genes. Nature 312:171–172
-
(1984)
Nature
, vol.312
, pp. 171-172
-
-
Ullu, E.1
Tschudi, C.2
-
212
-
-
84904735424
-
Transcriptional regulatory functions of nuclear long noncoding RNAs
-
COI: 1:CAS:528:DC%2BC2cXhtVKhurfI, PID: 24974018
-
Vance KW, Ponting CP (2014) Transcriptional regulatory functions of nuclear long noncoding RNAs. Trends Genet 30:348–355
-
(2014)
Trends Genet
, vol.30
, pp. 348-355
-
-
Vance, K.W.1
Ponting, C.P.2
-
213
-
-
0001918159
-
Loss of N-glycolylneuraminic acid in humans: mechanisms, consequences, and implications for hominid evolution
-
Varki A (2001) Loss of N-glycolylneuraminic acid in humans: mechanisms, consequences, and implications for hominid evolution. Am J Phys Anthropol Suppl 33:54–69
-
(2001)
Am J Phys Anthropol Suppl
, vol.33
, pp. 54-69
-
-
Varki, A.1
-
214
-
-
77952369047
-
Colloquium paper: uniquely human evolution of sialic acid genetics and biology
-
COI: 1:CAS:528:DC%2BC3cXmt1yitb8%3D, PID: 20445087
-
Varki A (2010) Colloquium paper: uniquely human evolution of sialic acid genetics and biology. Proc Natl Acad Sci U S A 107(Suppl):8939–8946
-
(2010)
Proc Natl Acad Sci U S A
, vol.107
, pp. 8939-8946
-
-
Varki, A.1
-
215
-
-
0032530173
-
Determining and dating recent rodent speciation events by using L1 (LINE-1) retrotransposons
-
COI: 1:CAS:528:DyaK1cXmt1agsL4%3D, PID: 9736728
-
Verneau O, Catzeflis F, Furano AV (1998) Determining and dating recent rodent speciation events by using L1 (LINE-1) retrotransposons. Proc Natl Acad Sci U S A 95:11284–11289
-
(1998)
Proc Natl Acad Sci U S A
, vol.95
, pp. 11284-11289
-
-
Verneau, O.1
Catzeflis, F.2
Furano, A.V.3
-
216
-
-
84922302820
-
The captured retroviral envelope syncytin-A and syncytin-B genes are conserved in the Spalacidae together with hemotrichorial placentation
-
PID: 25339103
-
Vernochet C, Redelsperger F, Harper F et al (2014) The captured retroviral envelope syncytin-A and syncytin-B genes are conserved in the Spalacidae together with hemotrichorial placentation. Biol Reprod 91:148–148
-
(2014)
Biol Reprod
, vol.91
, pp. 148
-
-
Vernochet, C.1
Redelsperger, F.2
Harper, F.3
-
217
-
-
84922295278
-
Enhancer evolution across 20 mammalian species
-
COI: 1:CAS:528:DC%2BC2MXitFyls7k%3D, PID: 25635462
-
Villar D, Berthelot C, Aldridge S et al (2015) Enhancer evolution across 20 mammalian species. Cell 160:554–566
-
(2015)
Cell
, vol.160
, pp. 554-566
-
-
Villar, D.1
Berthelot, C.2
Aldridge, S.3
-
218
-
-
33644777605
-
Evolutionary fate of retroposed gene copies in the human genome
-
COI: 1:CAS:528:DC%2BD28XksF2kt7s%3D, PID: 16492757
-
Vinckenbosch N, Dupanloup I, Kaessmann H (2006) Evolutionary fate of retroposed gene copies in the human genome. Proc Natl Acad Sci U S A 103:3220–3225
-
(2006)
Proc Natl Acad Sci U S A
, vol.103
, pp. 3220-3225
-
-
Vinckenbosch, N.1
Dupanloup, I.2
Kaessmann, H.3
-
219
-
-
33748936552
-
Turning junk into gold: domestication of transposable elements and the creation of new genes in eukaryotes
-
COI: 1:CAS:528:DC%2BD28XhtVKqsrjM, PID: 16937363
-
Volff JN (2006) Turning junk into gold: domestication of transposable elements and the creation of new genes in eukaryotes. BioEssays 28:913–922
-
(2006)
BioEssays
, vol.28
, pp. 913-922
-
-
Volff, J.N.1
-
220
-
-
0345724809
-
Diversity of retrotransposable elements in compact pufferfish genomes
-
COI: 1:CAS:528:DC%2BD3sXpt1emsb4%3D, PID: 14642744
-
Volff JN, Bouneau L, Ozouf-Costaz C, Fischer C (2003) Diversity of retrotransposable elements in compact pufferfish genomes. Trends Genet 19:674–678
-
(2003)
Trends Genet
, vol.19
, pp. 674-678
-
-
Volff, J.N.1
Bouneau, L.2
Ozouf-Costaz, C.3
Fischer, C.4
-
221
-
-
34248189595
-
Governing sex determination in fish: regulatory putsches and ephemeral dictators
-
PID: 18391519
-
Volff JN, Nanda I, Schmid M, Schartl M (2007) Governing sex determination in fish: regulatory putsches and ephemeral dictators. Sex Dev 1:85–99
-
(2007)
Sex Dev
, vol.1
, pp. 85-99
-
-
Volff, J.N.1
Nanda, I.2
Schmid, M.3
Schartl, M.4
-
222
-
-
84866370634
-
Horizontal transposon transfer in eukarya: detection, bias, and perspectives
-
PID: 22798449
-
Wallau GL, Ortiz MF, Loreto EL (2012) Horizontal transposon transfer in eukarya: detection, bias, and perspectives. Genome Biol Evol 4:689–699
-
(2012)
Genome Biol Evol
, vol.4
, pp. 689-699
-
-
Wallau, G.L.1
Ortiz, M.F.2
Loreto, E.L.3
-
223
-
-
36749061982
-
Species-specific endogenous retroviruses shape the transcriptional network of the human tumor suppressor protein p53
-
COI: 1:CAS:528:DC%2BD2sXhtl2ku7nI, PID: 18003932
-
Wang T, Zeng J, Lowe CB et al (2007) Species-specific endogenous retroviruses shape the transcriptional network of the human tumor suppressor protein p53. Proc Natl Acad Sci U S A 104:18613–18618
-
(2007)
Proc Natl Acad Sci U S A
, vol.104
, pp. 18613-18618
-
-
Wang, T.1
Zeng, J.2
Lowe, C.B.3
-
224
-
-
84922115236
-
Primate-specific endogenous retrovirus-driven transcription defines naive-like stem cells
-
COI: 1:CAS:528:DC%2BC2cXhvVemtrvJ, PID: 25317556
-
Wang J, Xie G, Singh M et al (2014) Primate-specific endogenous retrovirus-driven transcription defines naive-like stem cells. Nature 516:405–409
-
(2014)
Nature
, vol.516
, pp. 405-409
-
-
Wang, J.1
Xie, G.2
Singh, M.3
-
225
-
-
84898747543
-
Evolutionary dynamics and tissue specificity of human long noncoding RNAs in six mammals
-
COI: 1:CAS:528:DC%2BC2cXmt1Crs7Y%3D, PID: 24429298
-
Washietl S, Kellis M, Garber M (2014) Evolutionary dynamics and tissue specificity of human long noncoding RNAs in six mammals. Genome Res 24:616–628
-
(2014)
Genome Res
, vol.24
, pp. 616-628
-
-
Washietl, S.1
Kellis, M.2
Garber, M.3
-
226
-
-
77950414161
-
Genomic organization of duplicated short wave-sensitive and long wave-sensitive opsin genes in the green swordtail, Xiphophorus helleri
-
PID: 20353595
-
Watson CT, Lubieniecki KP, Loew E, Davidson WS, Breden F (2010) Genomic organization of duplicated short wave-sensitive and long wave-sensitive opsin genes in the green swordtail, Xiphophorus helleri. BMC Evol Biol 10:87
-
(2010)
BMC Evol Biol
, vol.10
, pp. 87
-
-
Watson, C.T.1
Lubieniecki, K.P.2
Loew, E.3
Davidson, W.S.4
Breden, F.5
-
227
-
-
19944432437
-
The repetitive landscape of the chicken genome
-
PID: 15256510
-
Wicker T, Robertson JS, Schulze SR et al (2005) The repetitive landscape of the chicken genome. Genome Res 15:126–136
-
(2005)
Genome Res
, vol.15
, pp. 126-136
-
-
Wicker, T.1
Robertson, J.S.2
Schulze, S.R.3
-
228
-
-
84887091047
-
Origin and evolution of yolk proteins: expansion and functional diversification of large lipid transfer protein superfamily
-
PID: 23426435
-
Wu LT, Hui JHL, Chu KH (2013) Origin and evolution of yolk proteins: expansion and functional diversification of large lipid transfer protein superfamily. Biol Reprod 88:102
-
(2013)
Biol Reprod
, vol.88
, pp. 102
-
-
Wu, L.T.1
Hui, J.H.L.2
Chu, K.H.3
-
229
-
-
33845218958
-
Emergence of primate genes by retrotransposon-mediated sequence transduction
-
COI: 1:CAS:528:DC%2BD28Xht1KnurnP, PID: 17101974
-
Xing J, Wang H, Belancio VP, Cordaux R, Deininger PL, Batzer MA (2006) Emergence of primate genes by retrotransposon-mediated sequence transduction. Proc Natl Acad Sci U S A 103:17608–17613
-
(2006)
Proc Natl Acad Sci U S A
, vol.103
, pp. 17608-17613
-
-
Xing, J.1
Wang, H.2
Belancio, V.P.3
Cordaux, R.4
Deininger, P.L.5
Batzer, M.A.6
-
230
-
-
78149243536
-
Origin and evolution of a placental-specific microRNA family in the human genome
-
PID: 21067568
-
Yuan Z, Sun X, Jiang D et al (2010) Origin and evolution of a placental-specific microRNA family in the human genome. BMC Evol Biol 10:346
-
(2010)
BMC Evol Biol
, vol.10
, pp. 346
-
-
Yuan, Z.1
Sun, X.2
Jiang, D.3
-
231
-
-
79959876171
-
A single nucleotide polymorphism in a miR-1302 binding site in CGA increases the risk of idiopathic male infertility
-
COI: 1:CAS:528:DC%2BC3MXosFWgsbs%3D, PID: 21601192
-
Zhang H, Liu Y, Su D et al (2011) A single nucleotide polymorphism in a miR-1302 binding site in CGA increases the risk of idiopathic male infertility. Fertil Steril 96:34–39
-
(2011)
Fertil Steril
, vol.96
, pp. 34-39
-
-
Zhang, H.1
Liu, Y.2
Su, D.3
-
232
-
-
84883103192
-
Inferring the expression variability of human transposable element-derived exons by linear model analysis of deep RNA sequencing data
-
COI: 1:CAS:528:DC%2BC3sXhsVKrtL%2FE, PID: 23984937
-
Zhang W, Edwards A, Fan W, Fang Z, Deininger P, Zhang K (2013) Inferring the expression variability of human transposable element-derived exons by linear model analysis of deep RNA sequencing data. BMC Genomics 14:584
-
(2013)
BMC Genomics
, vol.14
, pp. 584
-
-
Zhang, W.1
Edwards, A.2
Fan, W.3
Fang, Z.4
Deininger, P.5
Zhang, K.6
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