-
1
-
-
33646928347
-
A distal enhancer and an ultraconserved exon are derived from a novel retroposon
-
Bejerano, G., Lowe, C.B., Ahituv, N., King, B., Siepel, A., Salama, S.R., Rubin, E.M., Kent, W.J., and Haussler, D. 2006. A distal enhancer and an ultraconserved exon are derived from a novel retroposon. Nature 441: 87-90.
-
(2006)
Nature
, vol.441
, pp. 87-90
-
-
Bejerano, G.1
Lowe, C.B.2
Ahituv, N.3
King, B.4
Siepel, A.5
Salama, S.R.6
Rubin, E.M.7
Kent, W.J.8
Haussler, D.9
-
2
-
-
27344459172
-
Nuclear translocation of αN-catenin by the novel zinc finger transcriptional repressor ZASC1
-
Bogaerts, S., Vanlandschoot, A., van Hengel, J., and van Roy, F. 2005. Nuclear translocation of αN-catenin by the novel zinc finger transcriptional repressor ZASC1. Exp. Cell Res. 311: 1-13.
-
(2005)
Exp. Cell Res
, vol.311
, pp. 1-13
-
-
Bogaerts, S.1
Vanlandschoot, A.2
van Hengel, J.3
van Roy, F.4
-
3
-
-
0346447841
-
Genes and chromosomes
-
Nov
-
Bridges, C.B. 1936. Genes and chromosomes. Teaching Biol. Nov: 17-23.
-
(1936)
Teaching Biol
, pp. 17-23
-
-
Bridges, C.B.1
-
4
-
-
20444409791
-
Echoes from the past - Are we still in an RNP world?
-
Brosius, J. 2005. Echoes from the past - Are we still in an RNP world? Cytogenet. Genome Res. 110: 8-24.
-
(2005)
Cytogenet. Genome Res
, vol.110
, pp. 8-24
-
-
Brosius, J.1
-
5
-
-
0026447994
-
On "genomenclature": A comprehensive (and respectful) taxonomy for pseudogenes and other "junk DNA
-
Brosius, J. and Gould, S.J. 1992. On "genomenclature": a comprehensive (and respectful) taxonomy for pseudogenes and other "junk DNA". Proc. Natl. Acad. Sci. 89: 10706-10710.
-
(1992)
Proc. Natl. Acad. Sci
, vol.89
, pp. 10706-10710
-
-
Brosius, J.1
Gould, S.J.2
-
6
-
-
0018263844
-
Why genes in pieces?
-
Gilbert, W. 1978. Why genes in pieces? Nature 271: 501.
-
(1978)
Nature
, vol.271
, pp. 501
-
-
Gilbert, W.1
-
7
-
-
0033017956
-
CORE-SINEs: Eukaryotic short interspersed retroposing elements with common sequence motifs
-
Gilbert, N. and Labuda, D. 1999. CORE-SINEs: Eukaryotic short interspersed retroposing elements with common sequence motifs. Proc. Natl. Acad. Sci. 96: 2869-2874.
-
(1999)
Proc. Natl. Acad. Sci
, vol.96
, pp. 2869-2874
-
-
Gilbert, N.1
Labuda, D.2
-
8
-
-
33646145936
-
Do transposable elements really contribute to proteomes?
-
Gotea, V. and Makalowski, W. 2006. Do transposable elements really contribute to proteomes? Trends Genet. 22: 260-267.
-
(2006)
Trends Genet
, vol.22
, pp. 260-267
-
-
Gotea, V.1
Makalowski, W.2
-
9
-
-
30744451158
-
Adaptive loss of an old duplicated gene during incipient speciation
-
Greenberg, A.J., Moran, J.R., Fang, S., and Wu, C.-I. 2006. Adaptive loss of an old duplicated gene during incipient speciation. Mol. Biol. Evol. 23: 401-410.
-
(2006)
Mol. Biol. Evol
, vol.23
, pp. 401-410
-
-
Greenberg, A.J.1
Moran, J.R.2
Fang, S.3
Wu, C.-I.4
-
10
-
-
2442579711
-
An unappreciated role for RNA surveillance
-
doi: 10.1186/gb-2004-5-2-r8
-
Hillman, R.T., Green, R.E., and Brenner, S.E. 2004. An unappreciated role for RNA surveillance. Genome Biol. 5: R8. doi: 10.1186/gb-2004-5-2-r8.
-
(2004)
Genome Biol
, vol.5
-
-
Hillman, R.T.1
Green, R.E.2
Brenner, S.E.3
-
11
-
-
0141842706
-
Identification of ZASC1 encoding a Krüppel-like zinc finger protein as a novel target for 3q26 amplification in esophageal squamous cell carcinomas
-
Imoto, I., Yuki, Y., Sonoda, I., Ito, T., Shimada, Y., Imamura, M., and Inazawa, J. 2003. Identification of ZASC1 encoding a Krüppel-like zinc finger protein as a novel target for 3q26 amplification in esophageal squamous cell carcinomas. Cancer Res. 63: 5691-5696.
-
(2003)
Cancer Res
, vol.63
, pp. 5691-5696
-
-
Imoto, I.1
Yuki, Y.2
Sonoda, I.3
Ito, T.4
Shimada, Y.5
Imamura, M.6
Inazawa, J.7
-
12
-
-
8644235566
-
Anthology of human repetitive DNA
-
ed. R.A. Meyers, pp, Wiley-VCH, Weinheim
-
Kapitonov, V.V., Pavlicek, A., and Jurka, J. 2004. Anthology of human repetitive DNA. In Encyclopedia of molecular cell biology and molecular medicine (ed. R.A. Meyers), pp. 251-305. Wiley-VCH, Weinheim.
-
(2004)
Encyclopedia of molecular cell biology and molecular medicine
, pp. 251-305
-
-
Kapitonov, V.V.1
Pavlicek, A.2
Jurka, J.3
-
13
-
-
33646255212
-
Retroposed elements as archives for the evolutionary history of placental mammals
-
doi: 10.1371/journal. pbio.0040091
-
Kriegs, J.O., Churakov, G., Kiefmann, M., Jordan, U., Brosius, J., and Schmitz, J. 2006. Retroposed elements as archives for the evolutionary history of placental mammals. PLoS Biol. 4: e91. doi: 10.1371/journal. pbio.0040091.
-
(2006)
PLoS Biol
, vol.4
-
-
Kriegs, J.O.1
Churakov, G.2
Kiefmann, M.3
Jordan, U.4
Brosius, J.5
Schmitz, J.6
-
14
-
-
25444517024
-
Alu-SINE exonization: En route to protein-coding function
-
Krull, M., Brosius, J., and Schmitz, J. 2005. Alu-SINE exonization: En route to protein-coding function. Mol. Biol. Evol. 22: 1702-1711.
-
(2005)
Mol. Biol. Evol
, vol.22
, pp. 1702-1711
-
-
Krull, M.1
Brosius, J.2
Schmitz, J.3
-
15
-
-
2042437650
-
Initial sequencing and analysis of the human genome
-
Lander, E.S., Linton, L.M., Birren, B., Nusbaum, C., Zody, M.C., Baldwin, J., Devon, K., Dewar, K., Doyle, M., FitzHugh, W., et al. 2001. Initial sequencing and analysis of the human genome. Nature 409: 860-921.
-
(2001)
Nature
, vol.409
, pp. 860-921
-
-
Lander, E.S.1
Linton, L.M.2
Birren, B.3
Nusbaum, C.4
Zody, M.C.5
Baldwin, J.6
Devon, K.7
Dewar, K.8
Doyle, M.9
FitzHugh, W.10
-
16
-
-
0038701605
-
The birth of an alternatively spliced exon: 3 Splice-site selection in Alu exons
-
Lev-Maor, G., Sorek, R., Shomron, N., and Ast, G. 2003. The birth of an alternatively spliced exon: 3 Splice-site selection in Alu exons. Science 300: 1288-1291.
-
(2003)
Science
, vol.300
, pp. 1288-1291
-
-
Lev-Maor, G.1
Sorek, R.2
Shomron, N.3
Ast, G.4
-
17
-
-
0028356158
-
Alu sequences in the coding regions of mRNA: A source of protein variability
-
Makalowski, W., Mitchell, G.A., and Labuda, D. 1994. Alu sequences in the coding regions of mRNA: A source of protein variability. Trends Genet. 10: 188-193.
-
(1994)
Trends Genet
, vol.10
, pp. 188-193
-
-
Makalowski, W.1
Mitchell, G.A.2
Labuda, D.3
-
18
-
-
33846694462
-
Exonization of Alu-generated splice variants in the Survivin gene of human and non-human primates
-
Mola, G., Vela, E., Fernández-Figueras, M.T., Isamat, M., and Munoz-Mármol, A.M. 2007. Exonization of Alu-generated splice variants in the Survivin gene of human and non-human primates. J. Mol. Biol. 366: 1055-1063.
-
(2007)
J. Mol. Biol
, vol.366
, pp. 1055-1063
-
-
Mola, G.1
Vela, E.2
Fernández-Figueras, M.T.3
Isamat, M.4
Munoz-Mármol, A.M.5
-
19
-
-
33745620751
-
Functional noncoding sequences derived from SINEs in the mammalian genome
-
Nishihara, H., Smit, A.F.A., and Okada, N. 2006. Functional noncoding sequences derived from SINEs in the mammalian genome. Genome Res. 16: 864-874.
-
(2006)
Genome Res
, vol.16
, pp. 864-874
-
-
Nishihara, H.1
Smit, A.F.A.2
Okada, N.3
-
21
-
-
27344459274
-
The cDNA of mouse skeletal muscle transcribe for both isoforms 1 and 2 of acetylcholine receptor α subunit
-
Saini, S.S., Tüzün, E., and Christadoss, P. 2005. The cDNA of mouse skeletal muscle transcribe for both isoforms 1 and 2 of acetylcholine receptor α subunit. J. Neuroimmunol. 169: 177-179.
-
(2005)
J. Neuroimmunol
, vol.169
, pp. 177-179
-
-
Saini, S.S.1
Tüzün, E.2
Christadoss, P.3
-
22
-
-
3843093872
-
From "junk" to gene: Curriculum vitae of a primate receptor isoform gene
-
Singer, S.S., Maennel, D.N., Hehlgans, T., Brosius, J., and Schmitz, J. 2004. From "junk" to gene: Curriculum vitae of a primate receptor isoform gene. J. Mol. Biol. 341: 883-886.
-
(2004)
J. Mol. Biol
, vol.341
, pp. 883-886
-
-
Singer, S.S.1
Maennel, D.N.2
Hehlgans, T.3
Brosius, J.4
Schmitz, J.5
-
23
-
-
0037121088
-
Phylogenetic comparison of the pre-mRNA adenosine deaminase ADAR2 genes and transcripts: Conservation and diversity in editing site sequence and alternative splicing patterns
-
Slavov, D. and Gardiner, K. 2002. Phylogenetic comparison of the pre-mRNA adenosine deaminase ADAR2 genes and transcripts: Conservation and diversity in editing site sequence and alternative splicing patterns. Gene 299: 83-94.
-
(2002)
Gene
, vol.299
, pp. 83-94
-
-
Slavov, D.1
Gardiner, K.2
-
24
-
-
0028804572
-
MIRs are classic, tRNA-derived SINEs that amplified before the mammalian radiation
-
Smit, A.F. and Riggs, A.D. 1995. MIRs are classic, tRNA-derived SINEs that amplified before the mammalian radiation. Nucleic Acids Res. 23: 98-102.
-
(1995)
Nucleic Acids Res
, vol.23
, pp. 98-102
-
-
Smit, A.F.1
Riggs, A.D.2
-
25
-
-
0036064148
-
Alu-containing exons are alternatively spliced
-
Sorek, R., Ast, G., and Graur, D. 2002. Alu-containing exons are alternatively spliced. Genome Res. 12: 1060-1067.
-
(2002)
Genome Res
, vol.12
, pp. 1060-1067
-
-
Sorek, R.1
Ast, G.2
Graur, D.3
-
26
-
-
0036677083
-
mRNA surveillance: The perfect persist
-
Wagner, E. and Lykke-Andersen, J. 2002. mRNA surveillance: The perfect persist. J. Cell Sci. 115: 3033-3038.
-
(2002)
J. Cell Sci
, vol.115
, pp. 3033-3038
-
-
Wagner, E.1
Lykke-Andersen, J.2
-
27
-
-
26444593981
-
Evidence of functional selection pressure for alternative splicing events that accelerate evolution of protein subsequences
-
Xing, Y. and Lee, C. 2005. Evidence of functional selection pressure for alternative splicing events that accelerate evolution of protein subsequences. Proc. Natl. Acad. Sci. 102: 13526-13531.
-
(2005)
Proc. Natl. Acad. Sci
, vol.102
, pp. 13526-13531
-
-
Xing, Y.1
Lee, C.2
-
28
-
-
33745394130
-
Alternative splicing and RNA selection pressure - Evolutionary consequences for eukaryotic genomes
-
Xing, Y. and Lee, C. 2006. Alternative splicing and RNA selection pressure - Evolutionary consequences for eukaryotic genomes. Nat. Rev. Genet. 7: 499-509.
-
(2006)
Nat. Rev. Genet
, vol.7
, pp. 499-509
-
-
Xing, Y.1
Lee, C.2
-
29
-
-
0030683599
-
PAML: A program package for phylogenetic analysis by maximum likelihood
-
Yang, Z. 1997. PAML: A program package for phylogenetic analysis by maximum likelihood. Comput. Appl. Biosci. 13: 555-556.
-
(1997)
Comput. Appl. Biosci
, vol.13
, pp. 555-556
-
-
Yang, Z.1
-
30
-
-
0033979433
-
Estimating synonymous and nonsynonymous substitution rates under realistic evolutionary models
-
Yang, Z. and Nielsen, R. 2000. Estimating synonymous and nonsynonymous substitution rates under realistic evolutionary models. Mol. Biol. Evol. 17: 32-43.
-
(2000)
Mol. Biol. Evol
, vol.17
, pp. 32-43
-
-
Yang, Z.1
Nielsen, R.2
-
31
-
-
33748596625
-
Comparison of multiple vertebrate genomes reveals the birth and evolution of human exons
-
Zhang, X.H.-F. and Chasin, L.A. 2006. Comparison of multiple vertebrate genomes reveals the birth and evolution of human exons. Proc. Natl. Acad. Sci. 103: 13427-13432.
-
(2006)
Proc. Natl. Acad. Sci
, vol.103
, pp. 13427-13432
-
-
Zhang, X.H.-F.1
Chasin, L.A.2
|