Selection of promising strains of probiotics for foods: Proposal for a possible flow-chart with a special focus on the dark side of probiotics

Probiotics in Health and Disease: New Research

Volumn , Issue , 2014, Pages 1-22

  Bevilacqua, Antonio ^a   Campaniello, Daniela ^a   Speranza, Barbara ^a   Sinigaglia, Milena ^a   Corbo, Maria Rosaria ^a  

^a UNIVERSITY OF FOGGIA   (Italy)

Author keywords

Dark side; Foods; Probiotics; Technological robustness

Indexed keywords

EID: 84934937827     PISSN: None     EISSN: None     Source Type: Book    
DOI: None     Document Type: Chapter

References (95)

1. Aires, J., Doucet-Populaire, F. & Butel, M. J. (2007). Tetracycline resistance mediated by tet(W), tet(M) and tet(O) genes of Bifidobacterium isolated from humans. Applied and Environmental Microbiology, 73, 2751-2754.
2. Ammor, M. S., Flórez, A. B., Alvarez-Martín, P., Margolles, A. & Mayo, B. (2008). Analysis of tetracycline resistance tet(W) genes and their flaking sequences in intestinal Bifidobacterium species. Journal of Antimicrobial Chemotherapy, 62, 688-693.
3. Argyri, A., Zoumpopoulou, G., Karatzas, K. G., Tsakalidou, E., Nychas, G. J., Panagou, E. Z. & Tassou C. C. (2013). Selection of potential probiotic lactic acid bacteria from fermented olives by in vitro tests. Food Microbiology, 33, 282-291.
4. Asahara, T., Takahashi, M., Nomoto, K., Takayama, H., Onoue, M., Morotomi, M., Tanaka, R., Yokokura, T. & Yamashita, N. (2003) Assessment of safety of Lactobacillus strains based on resistance to host innate defense mechanisms. Clinical and Diagnostic Laboratory Immunology, 10, 169-173.
5. Bao, Y., Zhang, Y., Zhang, Y., Liu, Y., Wang, S., Dong, X., Wang, Y. & Zhang, H. (2010). Screening of potential probiotic properties of Lactobacillus fermentum isolated from traditional dairy products. Food Control, 21, 695-701.
6. Bautista-Gallego, J., Arroyo-Lopez, F. N., Rantsiou, K., Jimenez-Diaz, R., Garrido-Fernandez, A. & Cocolin, L. (2013). Screening of lactic acid bacteria isolated from fermented table olives with probiotic potential. Food Research International, 50, 135-142.
7. Begley, M., Gahan, C. G. & Hill, C. (2005). The interaction between bacteria and bile. FEMS Microbiology Reviews, 29, 625-651.
8. Begley, M., Hill, C. & Gahan, C. G. (2006). Bile salt hydrolase activity in probiotics. Applied and Environmental Microbiology, 72, 1729-1738.
9. Berg, R. D. (1992). Translocation and the indigenous gut flora. In: R. Fuller (ED.), Probiotics: The Scientific Basis (55-85). London: Chapman & Hall.
10. Berg, R. D. (1995). Bacterial translocation from the gastrointestinal tract. Trends in Microbiology, 3, 149-154.
11. Berr, F., Kullak-Ublick, G. A., Paumgartner, G., Munzing, W. & Hylemon, P.B. (1996). 7a-Dehydroxylating bacteria enhance deoxycholic acid input and cholesterol saturation of bile in patients with gallstones. Gastroenterology, 111, 1611-1620.
12. Bevilacqua, A., Altieri, C., Corbo, M. R., Sinigaglia, M. & Ouoba, L. I. I. (2010). Characterization of lactic acid bacteria isolated from Italian Bella di Cerignola table olives: selection of potential multifunctional starter cultures. Journal of Food Science, 75, M536-M544.
13. Bozdogan, B., Galopin, S., Gerbaud, G., Courvalin, P. & Leclerq, R. (2003). Chromosomal aaD2 encodes an aminoglycoside nucleotidyltransferase in Bacillus clausii. Antimicrobial Agents and Chemotherapy, 47, 1343-1346.
14. Brenchley, J. M. & Douek, D. C. (2012). Microbial translocation across the GI tract. Annual Reviews of Immunology, 30, 149-173.
15. Cannon, J. P., Lee, T. A., Bolanos, J. T. & Danziger, L. H. (2005). Pathogenic relevance of Lactobacillus: a retrospective review of over 200 cases. European Journal of Clinical Microbiology and Infectious Disease, 24, 31-40.
16. Cebeci, A & Gurakan, C. (2003). Properties of potential probiotic Lactobacillus plantarum strains. Food Microbiology, 20, 511-518.
17. Collado, M. C., Isolauri, E., Salminen, S. & Sanz, Y. (2009). The impact of probiotic on gut health. Development and application of an in vitro methodology to determine the transit tolerance of potentially probiotic Lactobacillus and Bifidobacterium species in the upper human gastrointestinal tract. Current Drug Metabolism, 10, 68-78.
18. Collado, M. C., Meriluoto, J. & Salminen, S. (2008). Adhesion and aggregation properties of probiotic and pathogen strains. European Food Research and Technology, 226, 1065-1073.
19. Corbo, M. R., Bevilacqua, A., Gallo, M., Speranza, B. & Sinigaglia, M. (2013). Immobilization and microencapsulation of Lactobacillus plantarum: performances and in vivo applications. Innovative Food Science and Emerging Technologies, 18, 196-201.
20. Darilmaz, D. O. & Beyatli, Y. (2012). Acid-bile, antibiotic resistance and inhibitory properties of propionibacteria isolated from Turkish traditional home-made cheeses. Anaerobe, 18, 122-127.
21. De Vuyst, L. D., Falony, G. & Leroy, F. (2008). Probiotics in fermented sausages. Meat Science, 80, 75-78.
22. Delcour, J., Ferain, T., Deghorain, M., Palumbo, E. & Hols, P. (1999). The biosynthesis and functionality of the cell-wall of lactic acid bacteria. Antonie Van Leeuwenhoek, 76, 159-184.
23. Devirgilis, C., Coppola, D., Barile, S., Colonna, B. & Perozzi, G. (2009). Characterization of the Tn916 conjugative transposon in a food-borne strain of Lactobacillus paracasei. Applied and Environmental Microbiology, 75, 3866-3871.
24. Doulgeraki, A., Pramateftaki, P., Argyri, A., Nychas, G.-J. E., Tassou, C. C. & Panagou, E. Z. (2013). Molecular characterization of lactic acid bacteria isolated from industrially fermented Greek table olives. LWT-Food Science and Technology, 50, 353-356.
25. Drago, L., Gismondo, M.R., Lombardi, A., de Haen, C. & Gozzini, L. (1997). Inhibition of in vitro growth of enteropathogens by new Lactobacillus isolates from human intestinal origin. FEMS Microbiology Letters, 153, 455-63.
26. Ebringer, L., Ferencik, M. & Krajcovic, J. (2008). Beneficial health effects of milk and fermented dairy products. Folia Microbiologica, 53, 378-394.
27. EFSA. (2004). Summary report EFSA Scientific Colloquium, 2, 13-14 December 2004, Brussels.
28. EFSA. (2007). Introduction of the Qualified Presumption of Safety approach for the assessment of selected microorganisms referred to EFSA. The EFSA Journal, 587, 1-16.
29. EFSA. (2008). Update of the criteria used in the assessment of bacterial resistance to antibiotics of human or veterinary importance. The EFSA Journal, 732, 1-15.
30. EFSA (2012). Scientific opinion on the maintenance of the list of QPS biological agents intentionally added to food and feed. The EFSA Journal, 10, 3020.
31. Espeche, M. C., Pellegrino, M., Frola, I., Larriestra, A., Bogni, C. & Nader-Macías, M. E. F. (2012). Lactic acid bacteria from raw milk as potentially beneficial strains to prevent bovine mastitis. Anaerobe, 18, 103-109.
32. FAO/WHO. (2002). Guidelines for the evaluation of probiotics in food. Food and Agriculture Organization of the United Nations and World Health Organization Working Group Report. http://www.who.int/foodsafety/publications/fs_management/probiotics2/en/, accessed 01.21. 2014.
33. FAO/WHO. (2001). Evaluation of health and nutritional properties of probiotics in food including powder milk with live lactic acid bacteria.
34. Fernandez, M. F., Boris, S. & Barbes, C. (2003). Probiotic properties of human lactobacilli strains to be used in the gastrointestinal tract. Journal of Applied Microbiology, 94, 449-55.
35. Franz, C. M., Huch, M., Abriouel, H., Holzapfel, W. & Gálvez, A. (2011). Enterococci as probiotics and their implications in food safety. International Journal of Food Microbiology, 151, 125-140.
36. Fukao, M. & Yajima, N. (2012). Assessment of antibiotic resistance in probiotic lactobacilli. In M. Pana (Ed.), Antibiotic Resistant Bacteria-A Continuous Challenge in the New Millennium. Rijeka, Croatia: In Tech Publisher.
37. Galopin, S. Cattoir, V. & Leclerq, R. (2009). A chromosomal chloramphenicol acetyltranferase determinant from a probiotic strain of Bacillus clausii. FEMS Microbiology Letters, 296, 185-189.
38. Girlich, D., Leclerq, R., Naas, T. & Nordmann, P. (2007). Molecular and biochemical characterization of the chromosome-encoded class Aß-Lactamase BCL-1 from Bacillus clausii. Antimicrobial Agents and Chemotherapy, 51, 4009-4014.
39. Gong, X., Yu, H., Chen, J. & Han B. (2012). Cell surface properties of Lactobacillus salivarius under osmotic stress. European Food Research and Technology, 234, 671-678.
40. Gotteland, M., Cires, M. J., Carvallo, C., Vega, N., Ramirez, M. A., Morales, P., Astudillo, F., Navarrete, P., Dubos, C., Figueroa, A., Troncoso, M., Ulloa, C., Mizgier, M. L., Carrasco-Pozo, C., Speisky, H., Brunser, O. & Figueroa, G. (2014). Probiotic screening and safety evaluation of Lactobacillus strains from plants, artisanal goat cheese, human stools, and breast milk. Journal of Medicinal Food, doi:10.1089/jmf.2013.0030.
41. Granato, D., Branco, G. F., Nazzaro, F., Cruz, A. G. & Faria J. A. F. (2010). Functional foods and nondairy probiotic food development: trends, concept, and products. Comprehensive Reviews in Food Science and Food Safety, 9, 292-302.
42. Gueimonde, M., Flórez, A. B., van Hoek, A. H., Stuer-Laurodsen, B., Strøman, P., de los Reyes-Gavilán, C. G. & Margolles, A. (2010). Genetic basis of tetracycline resistance in Bifidobacterium animalis subsp. lactis. Applied and Environmental Microbiology, 76, 3364-3369.
43. Gueimonde, M., Sánchez, B., de los Reyes-Gavilán, C. G. & Margolles, A. (2013). Antibiotic resistance in probiotic bacteria. Frontiers in Microbiology, 4, article 202.
44. Harty, D. S. W., Oakey, H. J., Patrikakis, M., Hume, E. B. H. & Knox, K. W. (1994). Pathogenic potential of lactobacilli. International Journal of Food Microbiology, 24, 179-189.
45. Heimbach, J. (2008). Generally Recognized as Safe (GRAS) determination of Lactobacillus reuteri strain DSM 17938. GRAS notice.
46. Huang, C.-H., Lee, F.-L. & Liou, J.-S. (2010). Rapid discrimination and identification of the Lactobacillus plantarum group based on a partial dnaK sequence and DNA fingerprinting techniques. Antonie van Leeuwenhoek, 97, 289-96.
47. Husmaini, Abbas, M. H., Purwati, E., Yuniza, A. & Alimon, A. R. (2011). Growth and survival of lactic acid bacteria isolated from byproduct of virgin coconut oil as probiotic candidate for poultry. International Journal of Poultry Science, 10, 309-314.
48. Jacobsen, C. N., Rosenfeldt, N. V., Hayford, A. E., Moller, P. L., Michaelsen, K. F., Paerregard, A., Sandstrom B., Tvede, M. & Jakobsen, M. (1999). Screening of probiotic activities of forty-seven strains of Lactobacillus sp by in vitro techniques and evaluation of colonisation ability of five selected strains in humans. Applied and Environmental Microbiology, 65, 4949-56.
49. Kechagia, M., Basoulis, D., Konstantopoulou, S., Dimitriadi, D., Gyftopoulou, K., Skarmoutsou, N. & Fakiri E. M. (2013). Health Benefits of Probiotics: A Review. ISRN Nutrition, 1, 1-45.
50. Klingberg, T. D., Axelsson, L., Naterstad, K., Elsser, D. & Budde, B. B. (2005). Identification of potential probiotic starter cultures for Scandinavian-type fermented sausages. International Journal of Food Microbiology, 105, 419-431.
51. Kos, B., Šušković, J., Vuković, S., Šimpraga, M., Frece, J. & Matošić, S. (2003). Adhesion and aggregation ability of probiotic strain Lactobacillus acidophilus M92. Journal of Applied Microbiology, 94, 981-987.
52. Lavermicocca, P., Valerio, F., Lonigro, S. L., De Angelis, M., Morelli, L., Callegari, M. L., Rizzello, C. G. & Visconti, A. (2005). Study of adhesion and survival of lactobacilli and bifidobacteria on table olives with the aim of formulating a new probiotic food. Applied and Environmental Microbiology, 71, 4233-4240.
53. Lebeer, S., Vanderleyden, J. & De Keersmaecker, S. C. (2008). Genes and molecules of lactobacilli supporting probiotic action. Microbiology and Molecular Biology Reviews, 72, 728-764.
54. Liong, M. T. & Shah, N. P. (2005). Acid and bile tolerance and cholesterol removal ability of lactobacilli strains. Journal of Dairy Science, 88, 55-66.
55. Liong, M.-T.(2008). safety of probiotics: translocation and infection. Nutrition Reviews, 66, 192-202.
56. Makaryus, A. N, Yang, R., Hahn, R. T & Kort, S. (2005). A rare case of Lactobacillus acidophilus presenting as mitral valve bacterial endocarditis. Echocardiography, 22, 421-425.
57. Mamianett, A., Garrido, D., Carducci, C. N. & Vescina, M. C. (1999). Fecal bile acid excretion pattern profile in gallstone patients. Medicina, 59, 269-273.
58. Maragkoudakis, P. A., Zoumpopoulou, G., Miaris, C., Kalantzopoulos, G., Pot, B. & Tsakalidou, E. (2006). Probiotic potential of Lactobacillus strains isolated from dairy products. International Dairy Journal, 16, 189-199.
59. Marco, M. L., Pavan, S. & Kleerebezem, M. (2006). Towards understanding molecular modes of probiotic action. Current Opinion in Biotechnology, 17, 204-210.
60. Martin, R., Olivares, M., Pérez, M., Xaus, J., Torre, C., Fernández, L. & Rodríguez, J. M. (2010). Identification and evaluation of the probiotic potential of lactobacilli isolated from canine milk. The Veterinary Journal, 185, 193-198.
61. Martins, F., Silva, A., Vieira, A., Barbosa, F., Arantes, R., Teixeira, M. & Nicoli, J. (2009). Comparative study of Bifidobacterium animalis, Escherichia coli, Lactobacillus casei and Saccharomyces boulardii probiotic properties. Archives of Microbiology, 191, 623-630.
62. Mattila-Sandholm, T., Myllärinena, P., Crittenden, R., Mogensen, G., Fondén, R. & Saarela, M. (2002). Technological challenges for future probiotic foods. International Dairy Journal, 12, 173-182.
63. McConnel, M., Mercer, A. & Tannock, G.(1991). Transfer of plasmid pAMß1 between members of the normal microflora inhabiting the murine digestive tract and modification of the plasmid in a Lactobacillus reuteri host. Microbial Ecology in Health and Disease, 4, 343-355.
64. Monteagudo-Mera, A., Rodriguez-Aparicio, L., Rua, J., Martinez-Blanco, H., Navasa, N., Garcia-Armesto, R. M. & Ferrero, M. A. (2012). In vitro evaluation of physiological probiotic properties of different lactic acid bacteria strains of dairy and human origin. Journal of Functional Foods, 4, 531-541.
65. Morelli, L., Sarra, P. G. & Bottazzi, V. (1988). In vivo transfer of pAM beta 1 from Lactobacillus reuteri to Enterococcus faecalis. Journal of Applied Bacteriology, 65, 371-375.
66. Ohland, C. L. & MacNaughton, W. K. (2010). Probiotic bacteria and intestinal epithelial barrier function. Americam Journal of Physiology, Gastrointestinal and Liver Physiology, 298, 807-819.
67. Ouwehand, A. C., Salminen, S., Toekkoe, S., Roberts, P. J., Ovaska, J. & Salminen, E. (2002). Resected human colonic tissue: new model for characterizing adhesion of lactic acid bacteria. Clinical and Diagnostic Laboratory Immunology, 9, 184-186.
68. Pennacchia, C., Ercolini, D., Blaiotta, G., Pepe, O., Mauriello, G. & Villani, F. (2004). Selection of Lactobacillus strains from fermented sausages for their potential use as probiotics. Meat Science, 67, 309-317.
69. Pennacchia, C., Vaughan, E. E. & Villani, F. (2006). Potential probiotic Lactobacillus strains from fermented sausages: further investigations on their probiotic properties. Meat Science, 73, 90-101.
70. Perdigon, G., Alvarez, S., Aquero, G., Medici, M. & Ruiz Holgado, A. P. (1997). Interactions between lactic acid bacteria, intestinal microflora and the immune system. In: M. T. Martins, M. I. Zanoli Sato, J. M. Tiedje, J. B. Norton Haggler, J. Dobereiner & P. Sanchez (Eds), Proceedings of the 7th International Symposium of Microbial Ecology, (311-316). Santos, Brazil.
71. Perricone, M., Bevilacqua, A., Corbo, M. R. & Sinigaglia, M. (2014). Technological characterization and probiotic traits of yeasts isolated from Altamura sourdough to select promising microorganisms as functional starter cultures for cereal-based products. Food Microbiology, 38, 26-35.
72. Petty, C. A. (2007). Detection and identification of microorganisms by gene amplification and sequencing. Clinical Infectious Disease, 44, 1108-1114.
73. Picot, A. & Lacroix C. (2004). Encapsulation of bifidobacteria in whey protein-based microcapsules and survival in simulated gastrointestinal conditions and in yoghurt. International Dairy Journal, 14, 505-515.
74. Rebucci, R., Sangalli, L., Fava, M., Bersani, C., Cantoni, C. & Baldi, A. (2007). Evaluation of functional aspects in Lactobacillus strains isolated from dry fermented sausages. Journal of Food Quality, 30, 187-201.
75. Rivera-Espinoza, Y. & Gallardo-Navarro, Y. (2010). Non-dairy probiotic products. Food Microbiology, 27, 1-11.
76. Rodriguez, A. V., Baigorí, M. D., Alvarez, S., Castro, G. R. & Oliver, G. (2001). Phosphatidylinositol-specific phospholipase C activity in Lactobacillus rhamnosus with capacity to translocate. FEMS Microbiology Letters, 204, 33-38.
77. Rosenberg, M., Gutnick, D. & Rosenberg, E. (1980). Adherence of bacteria to hydrocarbons: a simple method for measuring cell-surface hydrophobicity. FEMS Microbiol Letters, 9, 29-33.
78. Roy D. (2001). Media for the isolation and enumeration of bifidobacteria in dairy products. International Journal of Food Microbiology, 69, 167-182.
79. Ruiz-Moyano, S., Martin, A., Benito, M. J., Aranda, E., Casquete, R. & Cordoba, M. D. (2009). Safety and functional aspects of preselected enterococci for probiotic use in Iberian dry-fermented sausages. Journal of Food Science, 74, 398-404.
80. Salim Ammor, M., Belen Florez, A. & Mayo, B. (2007). Antibiotic resistance in nonenterococcal lactic acid bacteria and bifidobacteria. Food Microbiology, 24, 559-570.
81. Salyers, A., Moon, K. & Schlesinger, D. (2007). The human intestinal tract-a hotbed of resistance gene transfer? Part I CM Newsletter, 29, 17-21.
82. Shou, J., Motyka, L. E. & Daly, J. M. (1994). Intestinal microbial translocation: immunologic consequences and effects of interleukin-4. Surgery, 116, 868-876.
83. Sommer, M. O., Dantas, G. & Church, G. M. (2009). Functional characterization of the antibiotic resistance reservoir in the human microflora. Science, 325, 1128-1131.
84. Sridevi, N., Vishwe, P. & Prabhune, A. (2009). Hypocholesteremic effect of bile salt hydrolase from Lactobacillus buchneri ATCC 4005. Food Research International, 42, 516-520.
85. Tallon, R., Arias, S., Bressollier, P. & Urdaci, M. C. (2007). Strain-and matrixdependent adhesion of Lactobacillus plantarum is mediated by proteinaceous bacterial compounds. Journal of Applied Microbiology, 102, 442-451.
86. Tannock, G. W., Luchansky, J. B., Miller, L., Connel, H., Thode-Andersen, S., Mercer, A. A. & Klaenhammer, T. R. (1994). Molecular characterization of a plasmid-borne (pGT633) erythromycin resistance determinant (ermGT) from Lactobacillus reuteri 100-63. Plasmid, 31, 60-71.
87. Tannock, G. W. (1999) A fresh look at the intestinal microflora. In: G. W. Tannock (Ed.), Probiotics. A Critical Review, (5-14). Wymondham, UK: Horizon Scientific Press.
88. Vahabnezhad, E-. Mochon, A. B., Wozniak, L. J. & Ziring, D. A. (2013). Lactobacillus bacteremia associated with probiotic use in pediatric patient with ulcerative colitis. Journal of Clinical Gastroenterology, 47, 437-439.
89. Valerio, F., De Bellis, P., Lonigro, S. L., Morelli, L., Visconti, A. & Lavermicocca, P. (2006). In vitro and in vivo survival and transit tolerance of potentially probiotic strain carried by artichokes in the gastrointestinal tract. Applied and Environmental Microbiology, 72, 3042-3045.
90. van der Aa Kühle, A., Skovgaard, K. & Jespersen, L. (2005). In vitro screening of probiotic properties of Saccharomyces cerevisiae var. boulardii and food-borne Saccharomyces cerevisiae strains. International Journal of Food Microbiology, 101, 29-39.
91. Vescovo, M., Morelli, L., Bottazzi, V. & Gasson, M. J. (1983). Conjugal tranfer of broad-host-range plasmid pAMbetaJ into enteric species of lactic acid bacteria. Applied and Environmental Microbiology, 46, 753-755.
92. von Wright, A. (2001). Antibiotic resistance and probiotics. Available at www.foodprotection.org/events/european-symposia/11Ede/von_Wright.pdf 2011, accessed 1.21.2014.
93. Yoon, K. Y., Woodams, E. E. & Hang Y. D. (2006). Production of probiotic cabbage juice by lactic acid bacteria. Bioresource Technology 97, 1427-1430.
94. Zacarías, M. F., Binetti, A., Laco, M., Reinheimer, J. & Vinderola, G. (2011). Preliminary technological and probiotic characterization of bifidobacteria isolated from breast milk for use in dairy products. International Dairy Journal, 21, 548-555.
95. Zhang, H., Wang, Y., Syn, J., Guo, Z., Guo, H. & Ren, F. (2013). Safety evaluation of Lactobacillus paracasei subsp. paracasei LC-01, a probiotic bacterium. Journal of Microbiology, 51, 633-638.