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Volumn 48, Issue 11, 2008, Pages 2146-2165

Clustering and classifying diverse HIV entry inhibitors using a novel consensus shape-based virtual screening approach: Further evidence for multiple binding sites within the CCR5 extracellular pocket

Author keywords

[No Author keywords available]

Indexed keywords

BINDING ENERGY; QUERY PROCESSING;

EID: 57549116672     PISSN: 15499596     EISSN: 1549960X     Source Type: Journal    
DOI: 10.1021/ci800257x     Document Type: Article
Times cited : (32)

References (85)
  • 1
    • 0027203897 scopus 로고
    • Inhibition of HIVinfection by a fusion domain binding peptide from the HIV-1 envelope glycoprotein GP41
    • Jiang, S.; Lin, K.; Strick, N.: Neurath, A. R. Inhibition of HIVinfection by a fusion domain binding peptide from the HIV-1 envelope glycoprotein GP41. Biochem. Biophys. Res. Commun. 1993, 195, 533-538.
    • (1993) Biochem. Biophys. Res. Commun , vol.195 , pp. 533-538
    • Jiang, S.1    Lin, K.2    Strick, N.3    Neurath, A.R.4
  • 2
    • 33747622811 scopus 로고    scopus 로고
    • Small-molecule HIV-1 gp120 inhibitors to prevent HIV-1 entry: An emerging opportunity for drug development
    • Kadow, J.; Wang, H. G.; Lin, P. F. Small-molecule HIV-1 gp120 inhibitors to prevent HIV-1 entry: An emerging opportunity for drug development. Curr. Opin. Invest. Drugs 2006, 7, 721-726.
    • (2006) Curr. Opin. Invest. Drugs , vol.7 , pp. 721-726
    • Kadow, J.1    Wang, H.G.2    Lin, P.F.3
  • 3
    • 0033012398 scopus 로고    scopus 로고
    • Chemokine receptors as HIV-1 coreceptors: Roles in viral entry, tropism, and disease
    • Berger, E. A.; Murphy, P. M.; Farber, J. M. Chemokine receptors as HIV-1 coreceptors: Roles in viral entry, tropism, and disease. Annu. Rev. Immunol. 1999, 17, 657-700.
    • (1999) Annu. Rev. Immunol , vol.17 , pp. 657-700
    • Berger, E.A.1    Murphy, P.M.2    Farber, J.M.3
  • 4
    • 3042794175 scopus 로고    scopus 로고
    • Recent advances in understanding the molecular mechanisms of HIV-1 entry and fusion: Revisiting current targets and considering new options for therapeutic intervention
    • Markovic, I.; Clouse, K. A. Recent advances in understanding the molecular mechanisms of HIV-1 entry and fusion: revisiting current targets and considering new options for therapeutic intervention. Curr. HIV Res. 2004, 2, 223-234.
    • (2004) Curr. HIV Res , vol.2 , pp. 223-234
    • Markovic, I.1    Clouse, K.A.2
  • 5
    • 77956849100 scopus 로고    scopus 로고
    • New antiviral agents in preclinical or clinical development
    • De Clercq, E. New antiviral agents in preclinical or clinical development. Adv. Antiviral Drug Des. 2004, 4, 1-62.
    • (2004) Adv. Antiviral Drug Des , vol.4 , pp. 1-62
    • De Clercq, E.1
  • 6
    • 0036846898 scopus 로고    scopus 로고
    • Anti-HIV Agents and Targets
    • De Clercq, E. New Anti-HIV Agents and Targets. Med. Res. Rev. 2002, 22, 531-565.
    • (2002) Med. Res. Rev , vol.22 , pp. 531-565
    • Clercq, D.1    New, E.2
  • 8
    • 16644381659 scopus 로고    scopus 로고
    • The current status of, and challenges in, the development of CCR5 inhibitors as therapeutics for HIV-1 infection
    • Maeda, K.; Nakata, H.; Ogata, H.; Koh, Y.; Miyakawa, T.; Mitsuya, H. The current status of, and challenges in, the development of CCR5 inhibitors as therapeutics for HIV-1 infection. Curr. Opin. Pharmacol. 2004, 4, 447-452.
    • (2004) Curr. Opin. Pharmacol , vol.4 , pp. 447-452
    • Maeda, K.1    Nakata, H.2    Ogata, H.3    Koh, Y.4    Miyakawa, T.5    Mitsuya, H.6
  • 9
    • 33646755473 scopus 로고    scopus 로고
    • Discovery and development of small-molecule chemokine coreceptor CCR5 antagonists
    • Palani, A.; Tagat, J. R. Discovery and development of small-molecule chemokine coreceptor CCR5 antagonists. J. Med. Chem. 2006, 49, 2851-2857.
    • (2006) J. Med. Chem , vol.49 , pp. 2851-2857
    • Palani, A.1    Tagat, J.R.2
  • 10
    • 0035957911 scopus 로고    scopus 로고
    • Molecular Interaction of Cyclam and Bicyclam Non-peptide Antagonists with the CXCR4 Chemokine Receptor
    • Gerlach, L. O.; Skerlj, R. T.; Bridger, G. J.; Schwartz, T. W. Molecular Interaction of Cyclam and Bicyclam Non-peptide Antagonists with the CXCR4 Chemokine Receptor. J. Biol. Chem. 2001, 276, 14154-14160.
    • (2001) J. Biol. Chem , vol.276 , pp. 14154-14160
    • Gerlach, L.O.1    Skerlj, R.T.2    Bridger, G.J.3    Schwartz, T.W.4
  • 12
    • 42149089443 scopus 로고    scopus 로고
    • Comparison of ligand-based and receptor-based virtual screening of HIV entry inhibitors for the CXCR4 and CCR5 receptors using 3D ligand shape-matching and ligand-receptor docking
    • Pérez-Nueno, V. I.; Ritchie, D. W.; Rabal, O.; Pascual, R.; Borrell, J. I.; Teixidó, J. Comparison of ligand-based and receptor-based virtual screening of HIV entry inhibitors for the CXCR4 and CCR5 receptors using 3D ligand shape-matching and ligand-receptor docking. J. Chem. Inf. Model. 2008, 48, 509-533.
    • (2008) J. Chem. Inf. Model , vol.48 , pp. 509-533
    • Pérez-Nueno, V.I.1    Ritchie, D.W.2    Rabal, O.3    Pascual, R.4    Borrell, J.I.5    Teixidó, J.6
  • 13
    • 33744954776 scopus 로고    scopus 로고
    • Structural and molecular interactions of CCR5 inhibitors with CCR5
    • Maeda, K.; Das, D.; Ogata-Aoki, H.; Nakata, H.; Miyakawa, T.; Tojo, Y. Structural and molecular interactions of CCR5 inhibitors with CCR5. J. Biol. Chem. 2006, 281, 12688-12698.
    • (2006) J. Biol. Chem , vol.281 , pp. 12688-12698
    • Maeda, K.1    Das, D.2    Ogata-Aoki, H.3    Nakata, H.4    Miyakawa, T.5    Tojo, Y.6
  • 15
    • 43049147574 scopus 로고    scopus 로고
    • Binding modes of CCR5-targetting HIV entry inhibitors: Partial and full antagonists
    • Wang, T.; Duan, Y. Binding modes of CCR5-targetting HIV entry inhibitors: Partial and full antagonists. J. Mol. Graphics Modell. 2008, 26, 1287-1295.
    • (2008) J. Mol. Graphics Modell , vol.26 , pp. 1287-1295
    • Wang, T.1    Duan, Y.2
  • 20
    • 0036923938 scopus 로고    scopus 로고
    • Structure modeling of the chemokine receptor CCR5: Implications for ligand binding and selectivity
    • Paterlini, M. G. Structure modeling of the chemokine receptor CCR5: Implications for ligand binding and selectivity. Biophys. J. 2002, 83, 3012-3031.
    • (2002) Biophys. J , vol.83 , pp. 3012-3031
    • Paterlini, M.G.1
  • 21
    • 33745370466 scopus 로고    scopus 로고
    • Modelling the structural basis of human CCR5 chemokine receptor function: From homology modelbuilding and molecular dynamics validation to agonist and antagonist docking
    • Fano. A.; Ritchie, D. W.; Carrieri, A. Modelling the structural basis of human CCR5 chemokine receptor function: from homology modelbuilding and molecular dynamics validation to agonist and antagonist docking. J. Chem. Inf. Model. 2006, 46, 1223-1235.
    • (2006) J. Chem. Inf. Model , vol.46 , pp. 1223-1235
    • Fano, A.1    Ritchie, D.W.2    Carrieri, A.3
  • 22
    • 0000720929 scopus 로고    scopus 로고
    • Fast computation, rotation. and comparison of low resolution spherical harmonic molecular surfaces
    • Ritchie, D. W.; Kemp, G. J. L. Fast computation, rotation. and comparison of low resolution spherical harmonic molecular surfaces. J. Comput. Chem. 1999, 20, 383-395.
    • (1999) J. Comput. Chem , vol.20 , pp. 383-395
    • Ritchie, D.W.1    Kemp, G.J.L.2
  • 23
    • 57549103568 scopus 로고    scopus 로고
    • ParaSurf, version08; CEPOS InSilico Ltd.: Erlangen, Germany, 2008: http://www.ceposinsilico.de/Pages/Products.html (accessed May 26, 2008).
    • ParaSurf, version08; CEPOS InSilico Ltd.: Erlangen, Germany, 2008: http://www.ceposinsilico.de/Pages/Products.html (accessed May 26, 2008).
  • 24
    • 17144385534 scopus 로고    scopus 로고
    • Virtual screening workflow development guided by the "receiver operating characteristic" curve approach. application to high-throughput docking on metabotropic glutamate receptor subtype 4
    • Triballeau, N.; Acher, F.; Brabet, I.; Pin. J.-P.; Bertrand, H.-O. Virtual screening workflow development guided by the "receiver operating characteristic" curve approach. application to high-throughput docking on metabotropic glutamate receptor subtype 4. J. Med. Chem. 2005, 48, 2534-2547.
    • (2005) J. Med. Chem , vol.48 , pp. 2534-2547
    • Triballeau, N.1    Acher, F.2    Brabet, I.3    Pin, J.-P.4    Bertrand, H.-O.5
  • 25
    • 0034193510 scopus 로고    scopus 로고
    • Protein docking using spherical polar Fourier correlations
    • Ritchie, D. W.; Kemp, G. J. L. Protein docking using spherical polar Fourier correlations. Proteins: Struct., Fund., Genet. 2000, 39, 178-194.
    • (2000) Proteins: Struct., Fund., Genet , vol.39 , pp. 178-194
    • Ritchie, D.W.1    Kemp, G.J.L.2
  • 26
    • 23844489887 scopus 로고    scopus 로고
    • An analytical, variable resolution, complete description of static molecules and their intermolecular binding properties
    • Lin, J.; Clark, T. An analytical, variable resolution, complete description of static molecules and their intermolecular binding properties. J. Chem. Inf. Model. 2005, 45, 1010-1016.
    • (2005) J. Chem. Inf. Model , vol.45 , pp. 1010-1016
    • Lin, J.1    Clark, T.2
  • 27
    • 35248839331 scopus 로고    scopus 로고
    • Toward high throughput 3D virtual screening using spherical harmonic surface representations
    • Mavridis, L.; Hudson, B. D.; Ritchie, D. W. Toward high throughput 3D virtual screening using spherical harmonic surface representations. J. Chem. Inf. Model. 2007, 47, 1787-1796.
    • (2007) J. Chem. Inf. Model , vol.47 , pp. 1787-1796
    • Mavridis, L.1    Hudson, B.D.2    Ritchie, D.W.3
  • 29
    • 33646023117 scopus 로고    scopus 로고
    • An introduction to ROC analysis
    • Fawcett, T. An introduction to ROC analysis. Pattern Recognit. Lett. 2006, 27, 861-874.
    • (2006) Pattern Recognit. Lett , vol.27 , pp. 861-874
    • Fawcett, T.1
  • 30
    • 57549107118 scopus 로고    scopus 로고
    • Bridger, G.; Skerlj, R.; Kaller, A.; Harwing, C.; Bogucki, D.; Wilson, T. R.; Crawford, J.; McEachern, E. J.; Atsma, B.; Nan, S.; Zhou, Y. World Patent WO 0022600, 2002.
    • Bridger, G.; Skerlj, R.; Kaller, A.; Harwing, C.; Bogucki, D.; Wilson, T. R.; Crawford, J.; McEachern, E. J.; Atsma, B.; Nan, S.; Zhou, Y. World Patent WO 0022600, 2002.
  • 31
    • 57549116839 scopus 로고    scopus 로고
    • Bridger, G.; Skerlj, R.; Kaller, A.; Harwing, C.; Bogucki, D.; Wilson, T. R.; Crawford, J.; McEachern, E. J.; Atsma, B.; Nan, S.; Zhou, Y. World Patent WO 0022599, 2002.
    • Bridger, G.; Skerlj, R.; Kaller, A.; Harwing, C.; Bogucki, D.; Wilson, T. R.; Crawford, J.; McEachern, E. J.; Atsma, B.; Nan, S.; Zhou, Y. World Patent WO 0022599, 2002.
  • 32
    • 57549096694 scopus 로고    scopus 로고
    • Bridger, G.; Skerlj, R.; Kaller, A.; Harwing, C.; Bogucki, D.; Wilson, T. R.; Crawford, J.; McEachern, E. J.; Atsma, B.; Nan, S.; Zhou, Y. World Patent WO 00234745, 2002.
    • Bridger, G.; Skerlj, R.; Kaller, A.; Harwing, C.; Bogucki, D.; Wilson, T. R.; Crawford, J.; McEachern, E. J.; Atsma, B.; Nan, S.; Zhou, Y. World Patent WO 00234745, 2002.
  • 33
    • 57549102450 scopus 로고    scopus 로고
    • Bridger, G.; Skerlj, R.; Kaller, A.; Harwing, C.; Bogucki, D.; Wilson, T. R.; Crawford, J.; McEachern, E. J.; Atsma, B.; Nan, S.; Zhou, Y. World Patent WO 055876, 2003.
    • Bridger, G.; Skerlj, R.; Kaller, A.; Harwing, C.; Bogucki, D.; Wilson, T. R.; Crawford, J.; McEachern, E. J.; Atsma, B.; Nan, S.; Zhou, Y. World Patent WO 055876, 2003.
  • 36
    • 57549087922 scopus 로고    scopus 로고
    • Murakami, T.; Yoshida, A.; Tanaka, R.; Mitsuhashi, S.; Hirose, K.; Yanaka, M.; Yamamato, N.; Tanaka, Y. KRH-2731: An Orally Bioavailable CXCR4 Antagonist Is a Potent Inhibitor of HIV-1 Infection. In 2004 Antivirals Pipeline Report; Proceedings of the 11th Conference on Retroviruses and Opportunistic Infection, San Francisco, CA, Feb 8-11, 2004; Camp, R., Ed.; Treatment Action Group: San Francisco CA, 2004; Abstract 541.
    • Murakami, T.; Yoshida, A.; Tanaka, R.; Mitsuhashi, S.; Hirose, K.; Yanaka, M.; Yamamato, N.; Tanaka, Y. KRH-2731: An Orally Bioavailable CXCR4 Antagonist Is a Potent Inhibitor of HIV-1 Infection. In 2004 Antivirals Pipeline Report; Proceedings of the 11th Conference on Retroviruses and Opportunistic Infection, San Francisco, CA, Feb 8-11, 2004; Camp, R., Ed.; Treatment Action Group: San Francisco CA, 2004; Abstract 541.
  • 37
    • 57549117600 scopus 로고    scopus 로고
    • Yamazaki, T.; Saitou, A.; Ono, M.; Yokohama, S.; Bannai, K.; Hiroswe, K.; Yanaka, M. World Patent WO 029218, 2003
    • Yamazaki, T.; Saitou, A.; Ono, M.; Yokohama, S.; Bannai, K.; Hiroswe, K.; Yanaka, M. World Patent WO 029218, 2003
  • 38
    • 57549097068 scopus 로고    scopus 로고
    • Yamazaki, T.; Kikumoto, S.; Ono, M.; Saitou, A.; Takahashi, H.; Kumakura, S.; Hirose, K. World Patent WO 024697, 2004.
    • Yamazaki, T.; Kikumoto, S.; Ono, M.; Saitou, A.; Takahashi, H.; Kumakura, S.; Hirose, K. World Patent WO 024697, 2004.
  • 39
    • 0033598379 scopus 로고    scopus 로고
    • Synthesis and structure-activity relationships of phenylenebis(methylene)-linked bis-azamacrocycles that inhibit HIV-1 and HIV-2 replication by antagonism of the chemokine receptor CXCR4
    • Bridger, G. J.; Skerlj, R. T.; Padmanabhan, S.; Martellucci, S. A.; Henson, G. W.; Struyf, S.; Witvrouw, M.; Schols, D.; De Clercq, E. Synthesis and structure-activity relationships of phenylenebis(methylene)-linked bis-azamacrocycles that inhibit HIV-1 and HIV-2 replication by antagonism of the chemokine receptor CXCR4. J. Med. Chem. 1999, 42, 3971-3981.
    • (1999) J. Med. Chem , vol.42 , pp. 3971-3981
    • Bridger, G.J.1    Skerlj, R.T.2    Padmanabhan, S.3    Martellucci, S.A.4    Henson, G.W.5    Struyf, S.6    Witvrouw, M.7    Schols, D.8    De Clercq, E.9
  • 40
    • 0034062515 scopus 로고    scopus 로고
    • Inhibition of HIV infection by bicyclams, highly potent and specific CXCR4 antagonists
    • De Clercq, E. Inhibition of HIV infection by bicyclams, highly potent and specific CXCR4 antagonists. Mol. Pharmacol. 2000, 57, 833-839.
    • (2000) Mol. Pharmacol , vol.57 , pp. 833-839
    • De Clercq, E.1
  • 42
    • 0032775435 scopus 로고    scopus 로고
    • Bicyclams, selective antagonists of the human chemokine receptor CXCR4, potently inhibit feline immunodeficiency virus replication
    • Egberink, H. F.; De Clercq, E.; Van Vliet, A. L. W.; Balzarini, J.; Bridger, G. J.; Henson, G.; Horzinek, M. C.; Schols, D. Bicyclams, selective antagonists of the human chemokine receptor CXCR4, potently inhibit feline immunodeficiency virus replication. J. Virol. 1999, 73, 6346-6352.
    • (1999) J. Virol , vol.73 , pp. 6346-6352
    • Egberink, H.F.1    De Clercq, E.2    Van Vliet, A.L.W.3    Balzarini, J.4    Bridger, G.J.5    Henson, G.6    Horzinek, M.C.7    Schols, D.8
  • 46
    • 34848834558 scopus 로고    scopus 로고
    • Molecular mechanism of action of monociclam versus biciclam non-peptide antagonist in the CXCR4 chemokine receptor
    • Rosenkilde, M. M.; Gerlach, L. O.; Hatse, S.; Skerlj, R. L.; Schols, D.; Bridger, G.; Schwartz, T. W. Molecular mechanism of action of monociclam versus biciclam non-peptide antagonist in the CXCR4 chemokine receptor. J. Biol. Chem. 2007, 282, 27354-27365.
    • (2007) J. Biol. Chem , vol.282 , pp. 27354-27365
    • Rosenkilde, M.M.1    Gerlach, L.O.2    Hatse, S.3    Skerlj, R.L.4    Schols, D.5    Bridger, G.6    Schwartz, T.W.7
  • 48
    • 12144291142 scopus 로고    scopus 로고
    • The differential sensitivity of human and rhesus macaque CCR5 to small-molecule inhibitors of human immunodeficiency virus type 1 entry is explained by a single amino acid difference and suggests a mechanism of action for these inhibitors
    • Billick, E.; Seibert, C.; Pugach, P.; Ketas, T.; Trkola, A.; Endres, M. J.; Murgolo, N. J.; Coates, E.; Reyes, G. R.; Baroudy, B. M.; Sakmar, T. P.; Moore, J. P.; Kuhmann, S. E. The differential sensitivity of human and rhesus macaque CCR5 to small-molecule inhibitors of human immunodeficiency virus type 1 entry is explained by a single amino acid difference and suggests a mechanism of action for these inhibitors. J. Virol. 2004, 78, 4134-4144.
    • (2004) J. Virol , vol.78 , pp. 4134-4144
    • Billick, E.1    Seibert, C.2    Pugach, P.3    Ketas, T.4    Trkola, A.5    Endres, M.J.6    Murgolo, N.J.7    Coates, E.8    Reyes, G.R.9    Baroudy, B.M.10    Sakmar, T.P.11    Moore, J.P.12    Kuhmann, S.E.13
  • 49
    • 0035860744 scopus 로고    scopus 로고
    • Novel low molecular weight spirodiketopiperazine derivatives potently inhibit R5 HTV-1 infection through their antagonistic effects on CCR5
    • Maeda, K.; Yoshimura, K.; Shibayama, S.; Habashita, H.; Tada, H.; Sagawa, K.; Mikayawa, T.; Auki, M.; Fukushima, D.; Mitsuya, H. Novel low molecular weight spirodiketopiperazine derivatives potently inhibit R5 HTV-1 infection through their antagonistic effects on CCR5. J. Biol. Chem. 2001, 276, 35194-35200.
    • (2001) J. Biol. Chem , vol.276 , pp. 35194-35200
    • Maeda, K.1    Yoshimura, K.2    Shibayama, S.3    Habashita, H.4    Tada, H.5    Sagawa, K.6    Mikayawa, T.7    Auki, M.8    Fukushima, D.9    Mitsuya, H.10
  • 50
    • 57549099219 scopus 로고    scopus 로고
    • Shibayama, S.; Sagawa, K.; Watanabe, N.; Takeda, K.; Tada, H.; Fukushima, D. World Patent WO 2004054616, 2004.
    • Shibayama, S.; Sagawa, K.; Watanabe, N.; Takeda, K.; Tada, H.; Fukushima, D. World Patent WO 2004054616, 2004.
  • 51
    • 57549086836 scopus 로고    scopus 로고
    • Takaoka, Y.; Okamoto, M.; Genba, Y. World Patent WO 2004026874, 2004.
    • Takaoka, Y.; Okamoto, M.; Genba, Y. World Patent WO 2004026874, 2004.
  • 52
    • 57549087368 scopus 로고    scopus 로고
    • Takaoka, Y.; Nishizawa, R.; Shibayama, S.; Sagawa, K.; Matsuo, M. Y. World Patent WO 2002074770, 2002.
    • Takaoka, Y.; Nishizawa, R.; Shibayama, S.; Sagawa, K.; Matsuo, M. Y. World Patent WO 2002074770, 2002.
  • 53
    • 57549118868 scopus 로고    scopus 로고
    • Imawaka, H.; Shibayama, S.; Takaoka, Y. World Patent WO 2003035074, 2003.
    • Imawaka, H.; Shibayama, S.; Takaoka, Y. World Patent WO 2003035074, 2003.
  • 54
    • 57549087732 scopus 로고    scopus 로고
    • Cumming, J.; Tucker, H. World Patent WO 2003042177, 2003.
    • Cumming, J.; Tucker, H. World Patent WO 2003042177, 2003.
  • 55
    • 57549085519 scopus 로고    scopus 로고
    • Cumming, J. World Patent WO 2003042178, 2003.
    • Cumming, J. World Patent WO 2003042178, 2003.
  • 56
    • 57549112009 scopus 로고    scopus 로고
    • Cumming, J. World Patent WO 2003080574, 2003.
    • Cumming, J. World Patent WO 2003080574, 2003.
  • 57
    • 57549113289 scopus 로고    scopus 로고
    • Cumming, J.; Winter, J. World Patent WO 2004018425, 2004.
    • Cumming, J.; Winter, J. World Patent WO 2004018425, 2004.
  • 58
    • 57549100011 scopus 로고    scopus 로고
    • Burrows, J.; Cumming, J. World Patent WO 2002076, 2002.
    • Burrows, J.; Cumming, J. World Patent WO 2002076, 2002.
  • 59
    • 0037330767 scopus 로고    scopus 로고
    • Willoughby, C. W.; Rosauer, K. G.; Hale, J. J.; Budhu, R. J.; Mills, S. G.; Chapman, K. T.; MacCoss, M.; Malkowitz, L.; Springer, M. S.; Gould, S. L.; DeMartino, J. A.; Siciliano, S. J.; Cascieri, M. A.; Carella, A.; Catver, G.; Colmes, K.; Schlief, W. A.; Danzeisen, R.; Hazuda, D.; Kessler, J.; Lineberger, J.; Miller, M.; Emini, E. A. 1,3,4 Trisubstituted pyrrolidine CCR5 receptor antagonists bearing 4-aminoheterocycle substituted piperidine side chains. Bioorg. Med. Chem. Lett. 2003, 13, 427-431.
    • Willoughby, C. W.; Rosauer, K. G.; Hale, J. J.; Budhu, R. J.; Mills, S. G.; Chapman, K. T.; MacCoss, M.; Malkowitz, L.; Springer, M. S.; Gould, S. L.; DeMartino, J. A.; Siciliano, S. J.; Cascieri, M. A.; Carella, A.; Catver, G.; Colmes, K.; Schlief, W. A.; Danzeisen, R.; Hazuda, D.; Kessler, J.; Lineberger, J.; Miller, M.; Emini, E. A. 1,3,4 Trisubstituted pyrrolidine CCR5 receptor antagonists bearing 4-aminoheterocycle substituted piperidine side chains. Bioorg. Med. Chem. Lett. 2003, 13, 427-431.
  • 60
    • 57549084819 scopus 로고    scopus 로고
    • Kazmierski, W. M.; Aquino, C. J.; Bifulco, N.; Boros, E. E.; Chauder, B. A.; Chong, P. Y.; Duan, M.; Deanada, F. Jr.; Koble, C. S.; Malean, E. W.; Peckham, J. P.; Perkins, A. C.; Thompson, J. B.; Vanderwall, D. World Patent WO 2004054974, 2004.
    • Kazmierski, W. M.; Aquino, C. J.; Bifulco, N.; Boros, E. E.; Chauder, B. A.; Chong, P. Y.; Duan, M.; Deanada, F. Jr.; Koble, C. S.; Malean, E. W.; Peckham, J. P.; Perkins, A. C.; Thompson, J. B.; Vanderwall, D. World Patent WO 2004054974, 2004.
  • 61
    • 57549116628 scopus 로고    scopus 로고
    • Duan, M.; Kazmierski, W. M.; Aquino, C. J. World Patent WO 200405481, 2004.
    • Duan, M.; Kazmierski, W. M.; Aquino, C. J. World Patent WO 200405481, 2004.
  • 62
    • 57549092014 scopus 로고    scopus 로고
    • Peckham, J. P.; Aquino, C. J.; Kazmierski, W. M. World Patent WO2004055010, 2004.
    • Peckham, J. P.; Aquino, C. J.; Kazmierski, W. M. World Patent WO2004055010, 2004.
  • 63
    • 57549098574 scopus 로고    scopus 로고
    • Aquino, C. J.; Chong, P. Y.; Duan, M.; Kazmierski, W. M. World Patent WO 2004055011, 2004.
    • Aquino, C. J.; Chong, P. Y.; Duan, M.; Kazmierski, W. M. World Patent WO 2004055011, 2004.
  • 64
    • 57549092206 scopus 로고    scopus 로고
    • Youngman, M.; Kazmierski, W. M.; Yang, H.; Aquino, C. J. World Patent WO 2004055012, 2004.
    • Youngman, M.; Kazmierski, W. M.; Yang, H.; Aquino, C. J. World Patent WO 2004055012, 2004.
  • 65
    • 57549103696 scopus 로고    scopus 로고
    • Yang, H.; Kazmierski, W. M.; Aquino, C. J. World Patent WO 2004055016, 2004.
    • Yang, H.; Kazmierski, W. M.; Aquino, C. J. World Patent WO 2004055016, 2004.
  • 66
    • 4444384251 scopus 로고    scopus 로고
    • Synthesis of 1-benzothiepine and 1-benzazepine derivatives as orally active CCR5 antagonists
    • Aramaki, Y.; Seto, M.; Okawa, T.; Oda, T.; Kanzaki, N.; Shiraishi, M. Synthesis of 1-benzothiepine and 1-benzazepine derivatives as orally active CCR5 antagonists. Chem. Pharm. Bull. 2004, 52, 254-258.
    • (2004) Chem. Pharm. Bull , vol.52 , pp. 254-258
    • Aramaki, Y.1    Seto, M.2    Okawa, T.3    Oda, T.4    Kanzaki, N.5    Shiraishi, M.6
  • 67
    • 8844238461 scopus 로고    scopus 로고
    • Orally active antagonists as anti-HIV-1 agents: Synthesis and biological activity of 1-benzothiepine 1,1-dioxide and 1-benzazepine derivatives containing a tertiary amine moiety
    • Seto, M.; Aramaki, Y.; Okawa, T.; Miyamoto, N.; Aikawa, K.; Kanzaki, N.; Shiraishi, M. Orally active antagonists as anti-HIV-1 agents: Synthesis and biological activity of 1-benzothiepine 1,1-dioxide and 1-benzazepine derivatives containing a tertiary amine moiety. Chem. Pharm. Bull. 2004, 52, 577-590.
    • (2004) Chem. Pharm. Bull , vol.52 , pp. 577-590
    • Seto, M.1    Aramaki, Y.2    Okawa, T.3    Miyamoto, N.4    Aikawa, K.5    Kanzaki, N.6    Shiraishi, M.7
  • 68
    • 57549114026 scopus 로고    scopus 로고
    • Perros, M.; Price, D. A.; Stammen, B. L. C.; Wood, A. World Patent WO 2003084954, 2003.
    • Perros, M.; Price, D. A.; Stammen, B. L. C.; Wood, A. World Patent WO 2003084954, 2003.
  • 69
    • 57549087731 scopus 로고    scopus 로고
    • Basford, P. A.; Stephenson, P. T.; Taylor, S. C. J.; Wood, A. World Patent WO 2003084954, 2003.
    • Basford, P. A.; Stephenson, P. T.; Taylor, S. C. J.; Wood, A. World Patent WO 2003084954, 2003.
  • 70
    • 57549085518 scopus 로고    scopus 로고
    • Armour, D. R.; Price, D. A.; Stammen, B. L. C.; Wood, A.; Perros, M.; Edwards, M. P. World Patent WO 2000038680, 2000.
    • Armour, D. R.; Price, D. A.; Stammen, B. L. C.; Wood, A.; Perros, M.; Edwards, M. P. World Patent WO 2000038680, 2000.
  • 76
    • 0141889021 scopus 로고    scopus 로고
    • Generation of predictive pharmacophore models for CCR5 antagonists: Study with piperidine- and piperazine-based compounds as a new class of HIV-1 entry inhibitors
    • Debnath, A. K. Generation of predictive pharmacophore models for CCR5 antagonists: Study with piperidine- and piperazine-based compounds as a new class of HIV-1 entry inhibitors. J. Med. Chem. 2003, 46, 4501-4515.
    • (2003) J. Med. Chem , vol.46 , pp. 4501-4515
    • Debnath, A.K.1
  • 77
    • 84944178665 scopus 로고
    • Hierarchical grouping to optimize an objective function
    • Ward, J. H. Hierarchical grouping to optimize an objective function. J. Am. Statist. Assoc. 1963, 58, 236-244.
    • (1963) J. Am. Statist. Assoc , vol.58 , pp. 236-244
    • Ward, J.H.1
  • 78
    • 57549099614 scopus 로고    scopus 로고
    • JKlustor, version 5.0.4; ChemAxon Ltd, Budapest, Hungary, 2008;, accessed May 26, 2008
    • JKlustor, version 5.0.4; ChemAxon Ltd.: Budapest, Hungary, 2008; http://www.chemaxon.com/jchem/doc/user/JKlustor.html (accessed May 26, 2008).
  • 79
    • 0029831680 scopus 로고    scopus 로고
    • An automated approach for clustering an ensemble of NMR-derived protein structures into conformationally-related subfamilies
    • Kelley, L. A.; Gardner, S. P.; Sutcliffe, M. J. An automated approach for clustering an ensemble of NMR-derived protein structures into conformationally-related subfamilies. Protein Eng. 1996, 9, 1063-1065.
    • (1996) Protein Eng , vol.9 , pp. 1063-1065
    • Kelley, L.A.1    Gardner, S.P.2    Sutcliffe, M.J.3
  • 81
    • 0001109246 scopus 로고    scopus 로고
    • A fast method of molecular shape comparison: A simple application of a Gaussian description of molecular shape
    • Grant, A. J.; Pickup, B. T. A fast method of molecular shape comparison: a simple application of a Gaussian description of molecular shape. J. Comput. Chem. 1996, 17, 1653-1659.
    • (1996) J. Comput. Chem , vol.17 , pp. 1653-1659
    • Grant, A.J.1    Pickup, B.T.2
  • 82
    • 11644261806 scopus 로고    scopus 로고
    • Automated docking using a Lamarckian genetic algorithm and empirical binding free energy function
    • Morris, G. M.; Goodsell, D. S.; Halliday, R. S.; Hart, W.; Belew, R. K.; Olson, A. J. Automated docking using a Lamarckian genetic algorithm and empirical binding free energy function. J. Comput. Chem. 1998, 19, 1639-1662.
    • (1998) J. Comput. Chem , vol.19 , pp. 1639-1662
    • Morris, G.M.1    Goodsell, D.S.2    Halliday, R.S.3    Hart, W.4    Belew, R.K.5    Olson, A.J.6
  • 85


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