An automated approach for clustering an ensemble of NMR-derived protein structures into conformationally related subfamilies

Protein Engineering

Volumn 9, Issue 11, 1996, Pages 1063-1065

  Kelley, Lawrence A ^a   Gardner, Stephen P ^b   Sutcliffe, Michael J ^a  

^a UNIVERSITY OF LEICESTER   (United Kingdom)

^b OXFORD LASERS LTD   (United Kingdom)

Author keywords

Automated clustering; Cluster analysis; Multiple conformations; NMR spectroscopy; Protein structure

Indexed keywords

HIRUDIN;

ARTICLE; AUTOANALYSIS; CLUSTER ANALYSIS; NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY; PRIORITY JOURNAL; PROTEIN CONFORMATION; PROTEIN FAMILY; PROTEIN STRUCTURE;

EID: 0029831680     PISSN: 02692139     EISSN: None     Source Type: Journal    
DOI: 10.1093/protein/9.11.1063     Document Type: Article

References (11)

1. Abola, E.E., Bernstein, F.C, Bryant, S.H., Koetzle, T.F. and Weng, J. (1987) In Allen, F.H., Bergerhoff, G. and Sievers, R. (eds), Crystallographic Databases - Information Content, Software Systems, Scientific Applications. Data Commission of the International Union of Crystallography, Bonn, Germany, pp. 107-132.
2. Adzhubei, A.A., Laughton, C.A. and Neidle, S. (1995) Protein Engng, 8, 615-625.
3. Allen, F.H. and Doyle, M.J. (1991) Acta Crystallogr., B47, 41-49.
4. Billeter, M. (1992) Quart. Rev. Biophys., 25, 325-377.
5. Diamond, R. (1995) Acta Crystallogr., D51, 127-135.
6. Folkers, P.J.M., Clore, G.M., Driscoll, P.C., Dodt, J., Kohler, S. and Gronenborn, A.M. (1989) Biochemistry, 28, 2601-2617.
7. Guntert, P., Szyperski, T. and Wuthrich, K. (1995) Protein Sci., 4, 84.
8. Laskowski, R.A., MacArthur, M.W., Moss, D.S. and Thornton, J.M. (1993) J. Appl. Crystal., 26, 283-291.
9. McLachlan, A.D. (1982) Acta Crystallogr., A38, 871-873.
10. Modi, S., Paine, M.J., Sutcliffe, M.J., Lian, L.Y., Primrose, W.U., Wolf, C.R. and Roberts, G.C.K. (1996) Biochemistry, 35, 4540-4550.
11. Sutcliffe, M.J. (1993) Protein Sci., 2, 936-944.