The present and future of whole genome sequencing (WGS) and whole metagenome sequencing (WMS) for surveillance of antimicrobial resistant microorganisms and antimicrobial resistance genes across the food chain

Genes

Volumn 9, Issue 5, 2018, Pages

  Oniciuc, Elena A ^a   Likotrafiti, Eleni ^b   Alvarez Molina, Adrián ^c   Prieto, Miguel ^c   Santos, Jesús A ^c   Alvarez Ordóñez, Avelino ^c  

^a DUNAREA DE JOS UNIVERSITY OF GALATI   (Romania)

^b ALEXANDER TECHNOLOGICAL EDUCATIONAL INSTITUTE OF THESSALONIKI   (Greece)

^c University of León   (Spain)

Author keywords

Antimicrobial resistance; Foodborne pathogens; Metagenomics; Surveillance; Whole genome sequencing

Indexed keywords

ANTIBIOTIC RESISTANCE; ANTIMICROBIAL RESISTANCE GENE; BACTERIAL TRANSMISSION; BACTERIUM; FOOD CHAIN; FOODBORNE PATHOGENIC BACTERIA; GENE; GENE SEQUENCE; GENETIC ASSOCIATION; GENETIC RISK; HIGH THROUGHPUT SEQUENCING; QUANTITATIVE ANALYSIS; REVIEW; RISK ASSESSMENT; SEQUENCE ANALYSIS; STANDARDIZATION; WHOLE GENOME SEQUENCING; WHOLE METAGENOME SEQUENCING;

EID: 85047899081     PISSN: None     EISSN: 20734425     Source Type: Journal    
DOI: 10.3390/genes9050268     Document Type: Review

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