Norwegian patients and retail chicken meat share cephalosporin-resistant Escherichia coli and IncK/blaCMY-2 resistance plasmids

Clinical Microbiology and Infection

Volumn 23, Issue 6, 2017, Pages 407.e9-407.e15

  Berg, E S ^a   Wester, A L ^a   Ahrenfeldt, J ^b   Mo, S S ^c   Slettemeas J S ^c   Steinbakk, M ^a   Samuelsen, O ^d,e   Grude, N ^f   Simonsen, G S ^d,e   Lohr I H ^g   Jorgensen S B ^h   Tofteland, S ⁱ   Lund, O ^b   Dahle, U R ^a   Sunde, M ^a,c  

^a NORWEGIAN INSTITUTE OF PUBLIC HEALTH   (Norway)

^b TECHNICAL UNIVERSITY OF DENMARK   (Denmark)

^c NORWEGIAN VETERINARY INSTITUTE   (Norway)

^d UNIVERSITY HOSPITAL OF NORTH NORWAY   (Norway)

^e UNIVERSITY OF TROMSØ   (Norway)

^f VESTFOLD HOSPITAL TRUST   (Norway)

^g STAVANGER UNIVERSITY HOSPITAL   (Norway)

^h AKERSHUS UNIVERSITY HOSPITAL   (Norway)

ⁱ Sørlandet Hospital   (Norway)

Author keywords

Chicken meat; Plasmid mediated AmpC transmission; Urinary tract infections; Zoonotic transfer of cephalosporin resistant Escherichia coli

Indexed keywords

AMINOGLYCOSIDE ANTIBIOTIC AGENT; CEFOTAXIME; CEFTAZIDIME; CEPHALOSPORIN; COTRIMOXAZOLE; QUINOLINE DERIVED ANTIINFECTIVE AGENT; BETA LACTAMASE; BETA-LACTAMASE CMY-2, E COLI; CEPHALOSPORIN DERIVATIVE; ESCHERICHIA COLI PROTEIN;

ANTIBIOTIC RESISTANCE; ARTICLE; BACTERIAL GENE; BACTERIAL GENOME; BACTERIAL STRAIN; BACTERIUM ISOLATE; BLA CMY 2 GENE; CHICKEN MEAT; ESCHERICHIA COLI; GENE SEQUENCE; HUMAN; MULTILOCUS SEQUENCE TYPING; NONHUMAN; NORWEGIAN (PEOPLE); PHYLOGENY; PLASMID; POLYMERASE CHAIN REACTION; POULTRY; PRIORITY JOURNAL; SINGLE NUCLEOTIDE POLYMORPHISM; URINARY TRACT INFECTION; WHOLE GENOME SEQUENCING; ANALYSIS; ANIMAL; CHICKEN; CLASSIFICATION; ESCHERICHIA COLI INFECTION; FOOD CONTAMINATION; GENETICS; ISOLATION AND PURIFICATION; MICROBIOLOGY; NORWAY; POULTRY PRODUCT;

ANIMALS; BETA-LACTAMASES; CEPHALOSPORINS; CHICKENS; DRUG RESISTANCE, BACTERIAL; ESCHERICHIA COLI; ESCHERICHIA COLI INFECTIONS; ESCHERICHIA COLI PROTEINS; FOOD CONTAMINATION; HUMANS; NORWAY; PHYLOGENY; PLASMIDS; POLYMORPHISM, SINGLE NUCLEOTIDE; POULTRY PRODUCTS; URINARY TRACT INFECTIONS;

EID: 85013487487     PISSN: 1198743X     EISSN: 14690691     Source Type: Journal    
DOI: 10.1016/j.cmi.2016.12.035     Document Type: Article

References (33)

1. Holmes, A.H., Moore, L.S., Sundsfjord, A., Steinbakk, M., Regmi, S., Karkey, A., et al. Understanding the mechanisms and drivers of antimicrobial resistance. Lancet 387 (2016), 176–187.
2. Lazarus, B., Paterson, D.L., Mollinger, J.L., Rogers, B.A., Do human extraintestinal Escherichia coli infections resistant to expanded-spectrum cephalosporins originate from food-producing animals? A systematic review. Clin Infect Dis 60 (2015), 439–452.
3. WHO, Critically Important Antimicrobials for Human Medicine, 3rd Revision. Available at: http://appswhoint/iris/bitstream/10665/77376/1/9789241504485_engpdf, 2011 [Accessed April 2016].
4. EUCAST. European Food Safety Authority, Scientific Opinion on the public health risks of bacterial strains producing extended-spectrum β-lactamases and/or AmpC β-lactamases in food and food-producing animals. EFSA Journal, 9(2322), 2011 Available at: http://www.efsa.europa.eu/sites/default/files/scientific_output/files/main_documents/2322.pdf [Accessed April 2016].
5. Liebana, E., Carattoli, A., Coque, T.M., Hasman, H., Magiorakos, A.P., Mevius, D., et al. Public health risks of enterobacterial isolates producing extended-spectrum beta-lactamases or AmpC beta-lactamases in food and food-producing animals: an EU perspective of epidemiology, analytical methods, risk factors, and control options. Clin Infect Dis 56 (2013), 1030–1037.
6. Manges, A.R., Escherichia coli and urinary tract infections: the role of poultry-meat. Clin Microbiol Infect 22 (2016), 122–129.
7. NORM/NORM-VET. 2011, Usage of Antimicrobial Agents and Occurrence of Antimicrobial Resistance in Norway. Tromsø / Oslo, 2012 ISSN:1502–2307 (print) / 1890-9965 (electronic).
8. NORM/NORM-VET. 2012, Usage of Antimicrobial Agents and Occurrence of Antimicrobial Resistance in Norway. Tromsø / Oslo, 2013 ISSN:1502–2307 (print) / 1890-9965 (electronic).
9. NORM/NORM-VET. 2014, Usage of Antimicrobial Agents and Occurrence of Antimicrobial Resistance in Norway. Tromsø / Oslo, 2015 ISSN:1502–2307 (print) / 1890-9965 (electronic).
10. Mo, S.S., Norstrom, M., Slettemeas, J.S., Lovland, A., Urdahl, A.M., Sunde, M., Emergence of AmpC-producing Escherichia coli in the broiler production chain in a country with a low antimicrobial usage profile. Vet Microbiol 171 (2014), 315–320.
11. Mo, S.S., Slettemeas, J.S., Berg, E.S., Norstrom, M., Sunde, M., Plasmid and host strain characteristics of Escherichia coli resistant to extended-spectrum cephalosporins in the Norwegian broiler production. PloS One, 11, 2016, e0154019.
12. Brolund, A., Wisell, K.T., Edquist, P.J., Elfstrom, L., Walder, M., Giske, C.G., Development of a real-time SYBRGreen PCR assay for rapid detection of acquired AmpC in Enterobacteriaceae. J Microbiol Methods 82 (2010), 229–233.
13. EUCAST, EUCAST guidelines for detection of resistance mechanisms and specific resistances of clinical and/or epidemiological importance. EUCAST, 2011 Available at: http://www.eucast.org/fileadmin/src/media/PDFs/EUCAST_files/Resistance_mechanisms/EUCAST_detection_of_resistance_mechanisms_v1.0_20131211.pdf [Accessed April 2016].
14. Carattoli, A., Bertini, A., Villa, L., Falbo, V., Hopkins, K.L., Threlfall, E.J., Identification of plasmids by PCR-based replicon typing. J Microbiol Methods 63 (2005), 219–228.
15. Bankevich, A., Nurk, S., Antipov, D., Gurevich, A.A., Dvorkin, M., Kulikov, A.S., et al. SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing. J Comput Biol 19 (2012), 455–477.
16. Kaas, R.S., Leekitcharoenphon, P., Aarestrup, F.M., Lund, O., Solving the problem of comparing whole bacterial genomes across different sequencing platforms. PloS One, 9, 2014, e104984.
17. Leimbach, A., Hacker, J., Dobrindt, U., E. coli as an all-rounder: the thin line between commensalism and pathogenicity. Curr Top Microbiol Immunol 358 (2013), 3–32.
18. Kaas, R.S., Friis, C., Ussery, D.W., Aarestrup, F.M., Estimating variation within the genes and inferring the phylogeny of 186 sequenced diverse Escherichia coli genomes. BMC Genomics, 13, 2012, 577.
19. de Been, M., Lanza, V.F., de Toro, M., Scharringa, J., Dohmen, W., Du, Y., et al. Dissemination of cephalosporin resistance genes between Escherichia coli strains from farm animals and humans by specific plasmid lineages. PLoS Genet, 10, 2014, e1004776.
20. Drummond, A.J., Suchard, M.A., Xie, D., Rambaut, A., Bayesian phylogenetics with BEAUti and the BEAST 1.7. Mol Biol Evol 29 (2012), 1969–1973.
21. Voets, G.M., Fluit, A.C., Scharringa, J., Schapendonk, C., van den Munckhof, T., Leverstein-van Hall, M.A., et al. Identical plasmid AmpC beta-lactamase genes and plasmid types in E. coli isolates from patients and poultry meat in the Netherlands. Int J Food Microbiol 167 (2013), 359–362.
22. Dierikx, C., van der Goot, J., Fabri, T., van Essen-Zandbergen, A., Smith, H., Mevius, D., Extended-spectrum-beta-lactamase- and AmpC-beta-lactamase-producing Escherichia coli in Dutch broilers and broiler farmers. J Antimicrob Chemother 68 (2013), 60–67.
23. Agerso, Y., Jensen, J.D., Hasman, H., Pedersen, K., Spread of extended spectrum cephalosporinase-producing Escherichia coli clones and plasmids from parent animals to broilers and to broiler meat in a production without use of cephalosporins. Foodborne Pathog Dis 11 (2014), 740–746.
24. Seiffert, S.N., Tinguely, R., Lupo, A., Neuwirth, C., Perreten, V., Endimiani, A., High prevalence of extended-spectrum-cephalosporin-resistant enterobacteriaceae in poultry meat in Switzerland: emergence of CMY-2- and VEB-6-possessing Proteus mirabilis. Antimicrob Agents Chemother 57 (2013), 6406–6408.
25. Day, M.J., Rodriguez, I., van Essen-Zandbergen, A., Dierikx, C., Kadlec, K., Schink, A.K., et al. Diversity of STs, plasmids and ESBL genes among Escherichia coli from humans, animals and food in Germany, the Netherlands and the UK. J Antimicrob Chemother 71 (2016), 1178–1182.
26. Jakobsen, L., Kurbasic, A., Skjot-Rasmussen, L., Ejrnaes, K., Porsbo, L.J., Pedersen, K., et al. Escherichia coli isolates from broiler chicken meat, broiler chickens, pork, and pigs share phylogroups and antimicrobial resistance with community-dwelling humans and patients with urinary tract infection. Foodborne Pathog Dis 7 (2010), 537–547.
27. Kluytmans, J.A., Overdevest, I.T., Willemsen, I., Kluytmans-van den Bergh, M.F., van der Zwaluw, K., Heck, M., et al. Extended-spectrum beta-lactamase-producing Escherichia coli from retail chicken meat and humans: comparison of strains, plasmids, resistance genes, and virulence factors. Clin Infect Dis 56 (2013), 478–487.
28. Leverstein-van Hall, M.A., Dierikx, C.M., Cohen Stuart, J., Voets, G.M., van den Munckhof, M.P., van Essen-Zandbergen, A., et al. Dutch patients, retail chicken meat and poultry share the same ESBL genes, plasmids and strains. Clin Microbiol Infect 17 (2011), 873–880.
29. Overdevest, I., Willemsen, I., Rijnsburger, M., Eustace, A., Xu, L., Hawkey, P., et al. Extended-spectrum beta-lactamase genes of Escherichia coli in chicken meat and humans, The Netherlands. Emerg Infect Dis 17 (2011), 1216–1222.
30. Vincent, C., Boerlin, P., Daignault, D., Dozois, C.M., Dutil, L., Galanakis, C., et al. Food reservoir for Escherichia coli causing urinary tract infections. Emerg Infect Dis 16 (2010), 88–95.
31. Borjesson, S., Ny, S., Egervarn, M., Bergstrom, J., Rosengren, A., Englund, S., et al. Limited dissemination of extended-spectrum beta-lactamase- and plasmid-encoded AmpC-producing Escherichia coli from food and farm animals, Sweden. Emerg Infect Dis 22 (2016), 634–640.
32. Egervarn, M., Borjesson, S., Byfors, S., Finn, M., Kaipe, C., Englund, S., et al. Escherichia coli with extended-spectrum beta-lactamases or transferable AmpC beta-lactamases and Salmonella on meat imported into Sweden. Int J Food Microbiol. 171 (2014), 8–14.
33. Unterholzner, S.J., Poppenberger, B., Rozhon, W., Toxin–antitoxin systems: biology, identification, and application. Mob Genet Elements, 3, 2013, e26219.