-
1
-
-
40549120596
-
The RAST Server: Rapid annotations using subsystems technology
-
Aziz RK, Bartels D, Best AA, et al. The RAST Server: Rapid annotations using subsystems technology. BMC Genomics 2008;9:75.
-
(2008)
BMC Genomics
, vol.9
, pp. 75
-
-
Aziz, R.K.1
Bartels, D.2
Best, A.A.3
-
2
-
-
84888339710
-
Identification of novel antimicrobial resistance genes from microbiota on retail spinach
-
Berman HF, Riley LW. Identification of novel antimicrobial resistance genes from microbiota on retail spinach. BMC Microbiol 2013;13:272.
-
(2013)
BMC Microbiol
, vol.13
, pp. 272
-
-
Berman, H.F.1
Riley, L.W.2
-
3
-
-
84880144696
-
A brief multidisciplinary review on antimicrobial resistance in medicine and its linkage to the global environmental microbiota
-
Cantas L, Shah SQ, Cavaco LM, et al. A brief multidisciplinary review on antimicrobial resistance in medicine and its linkage to the global environmental microbiota. Front Microbiol 2013;4:96.
-
(2013)
Front Microbiol
, vol.4
, pp. 96
-
-
Cantas, L.1
Shah, S.Q.2
Cavaco, L.M.3
-
5
-
-
84874586090
-
Investigation of antibiotic resistance in the genomic era of multidrug-resistant Gram-negative bacilli, especially Enterobacteriaceae, Pseudomonas and Acinetobacter
-
Diene SM, Rolain J.-M. Investigation of antibiotic resistance in the genomic era of multidrug-resistant Gram-negative bacilli, especially Enterobacteriaceae, Pseudomonas and Acinetobacter. Expert Rev Anti Infect Ther 2013;11:277.
-
(2013)
Expert Rev Anti Infect Ther
, vol.11
, pp. 277
-
-
Diene, S.M.1
Rolain, J.-M.2
-
6
-
-
79251641527
-
Virulenceassociated and antibiotic resistance genes of microbial populations in cattle feces analyzed using a metagenomic approach
-
Durso LM, Harhay GP, Bono JL, Smith TP. Virulenceassociated and antibiotic resistance genes of microbial populations in cattle feces analyzed using a metagenomic approach. J Microbiol Methods 2011;84:278-282.
-
(2011)
J Microbiol Methods
, vol.84
, pp. 278-282
-
-
Durso, L.M.1
Harhay, G.P.2
Bono, J.L.3
Smith, T.P.4
-
7
-
-
84868318290
-
Distribution and quantification of antibiotic resistant genes and bacteria across agricultural and non-agricultural metagenomes
-
Durso LM, Miller DN, Wienhold BJ. Distribution and quantification of antibiotic resistant genes and bacteria across agricultural and non-agricultural metagenomes. PLoS One 2012; 7:e48325.
-
(2012)
PLoS One
, vol.7
, pp. e48325
-
-
Durso, L.M.1
Miller, D.N.2
Wienhold, B.J.3
-
8
-
-
84865531061
-
The shared antibiotic resistome of soil bacteria and human pathogens
-
Forsberg KJ, Reyes A, Wang B, Selleck EM, Sommer MO, Dantas G. The shared antibiotic resistome of soil bacteria and human pathogens. Science 2012;337:1107-1111.
-
(2012)
Science
, vol.337
, pp. 1107-1111
-
-
Forsberg, K.J.1
Reyes, A.2
Wang, B.3
Selleck, E.M.4
Sommer, M.O.5
Dantas, G.6
-
9
-
-
84905460334
-
Characterization of microbiota composition and presence of selected antibiotic resistance genes in carriage water of ornamental fish
-
Gerzova L, Videnska P, Faldynova M, et al. Characterization of microbiota composition and presence of selected antibiotic resistance genes in carriage water of ornamental fish. PLoS One 2014;9: e103865.
-
(2014)
PLoS One
, vol.9
, pp. e103865
-
-
Gerzova, L.1
Videnska, P.2
Faldynova, M.3
-
10
-
-
34547345994
-
The effects of subtherapeutic antibiotic use in farm animals on the proliferation and persistence of antibiotic resistance among soil bacteria
-
Ghosh S, LaPara TM. The effects of subtherapeutic antibiotic use in farm animals on the proliferation and persistence of antibiotic resistance among soil bacteria. ISME J 2007;1:191-203.
-
(2007)
ISME J
, vol.1
, pp. 191-203
-
-
Ghosh, S.1
LaPara, T.M.2
-
12
-
-
84870226311
-
Surveillance programmes and antibiotic resistance: Worldwide and regional monitoring of antibiotic resistance trends
-
Berlin Heidelberg: Springer
-
Hawser S. Surveillance programmes and antibiotic resistance: Worldwide and regional monitoring of antibiotic resistance trends. In Antibiotic Resistance. Berlin Heidelberg: Springer, 2012, pp. 31-43.
-
(2012)
Antibiotic Resistance
, pp. 31-43
-
-
Hawser, S.1
-
13
-
-
84884274259
-
Longitudinal study of distributions of similar antimicrobial-resistant Salmonella serovars in pigs and their environment in two distinct swine production systems
-
Keelara S, Scott HM, Morrow WM, Gebreyes WA, Correa M, Nayak R, Stefanova R, Thakur S. Longitudinal study of distributions of similar antimicrobial-resistant Salmonella serovars in pigs and their environment in two distinct swine production systems. Appl Environ Microbiol 2013;79:5167-5178.
-
(2013)
Appl Environ Microbiol
, vol.79
, pp. 5167-5178
-
-
Keelara, S.1
Scott, H.M.2
Morrow, W.M.3
Gebreyes, W.A.4
Correa, M.5
Nayak, R.6
Stefanova, R.7
Thakur, S.8
-
14
-
-
84958702981
-
The plasmidome of firmicutes: Impact on the emergence and the spread of resistance to antimicrobials
-
PLAS-0039-2014
-
Lanza VF, Tedim AP, Martínez JL, Baquero F, Coque TM. The plasmidome of firmicutes: Impact on the emergence and the spread of resistance to antimicrobials. Microbiol Spectr 2015;3:PLAS-0039-2014.
-
(2015)
Microbiol Spectr
, vol.3
-
-
Lanza, V.F.1
Tedim, A.P.2
Martínez, J.L.3
Baquero, F.4
Coque, T.M.5
-
16
-
-
58149183697
-
ARDB-Antibiotic resistance genes database
-
Liu B, Pop M. ARDB-Antibiotic resistance genes database. Nucleic Acids Res 2009;37:D443-D447.
-
(2009)
Nucleic Acids Res
, vol.37
, pp. D443-D447
-
-
Liu, B.1
Pop, M.2
-
18
-
-
84973905140
-
-
Accessed January 1
-
http://vegan.rforge. r-project.org/Accessed January 1, 2015.
-
(2015)
-
-
-
19
-
-
80054093637
-
Environmental and gut bacteroidetes: The food connection
-
Thomas F, Hehemann J.-H, Rebuffet E, Czjzek M, Michel G. Environmental and gut bacteroidetes: The food connection. Front Microbiol 2011;2:93.
-
(2011)
Front Microbiol
, vol.2
, pp. 93
-
-
Thomas, F.1
Hehemann, J.-H.2
Rebuffet, E.3
Czjzek, M.4
Michel, G.5
-
20
-
-
80053270790
-
Survival characteristics of Salmonella enterica serovar Newport in the dairy farm environment
-
Toth J, Aceto H, Rankin S, Dou Z. Survival characteristics of Salmonella enterica serovar Newport in the dairy farm environment. J Dairy Sci 2011;94:5238-5246.
-
(2011)
J Dairy Sci
, vol.94
, pp. 5238-5246
-
-
Toth, J.1
Aceto, H.2
Rankin, S.3
Dou, Z.4
-
21
-
-
84882894598
-
Short communication: Survey of animal-borne pathogens in the farm environment of 13 dairy operations
-
Toth J, Aceto H, Rankin S, Dou Z. Short communication: Survey of animal-borne pathogens in the farm environment of 13 dairy operations. J Dairy Sci 2013;96:5756-5761.
-
(2013)
J Dairy Sci
, vol.96
, pp. 5756-5761
-
-
Toth, J.1
Aceto, H.2
Rankin, S.3
Dou, Z.4
-
22
-
-
0034050151
-
Epidemiology of resistance to antibiotics: Links between animals and humans
-
van den Bogaard AE, Stobberingh EE. Epidemiology of resistance to antibiotics: Links between animals and humans. Int J Antimicrob Agents 2000;14:327-335.
-
(2000)
Int J Antimicrob Agents
, vol.14
, pp. 327-335
-
-
Van Den Bogaard, A.E.1
Stobberingh, E.E.2
-
23
-
-
66949146907
-
Antimicrobial resistance in Bacteroides spp.: Occurrence and dissemination
-
Vedantam G. Antimicrobial resistance in Bacteroides spp.: Occurrence and dissemination. FutureMicrobiol 2009;4:413-423.
-
(2009)
FutureMicrobiol
, vol.4
, pp. 413-423
-
-
Vedantam, G.1
-
24
-
-
84878908205
-
The culturable soil antibiotic resistome: A community of multi-drug resistant bacteria
-
Walsh F, Duffy B. The culturable soil antibiotic resistome: A community of multi-drug resistant bacteria. Future Microbiol 2013;8:e65567.
-
(2013)
Future Microbiol
, vol.8
, pp. e65567
-
-
Walsh, F.1
Duffy, B.2
-
26
-
-
84922220803
-
A RESTful API for accessing microbial community data for MG-RAST
-
Wilke A, Bischof J, Harrison T, et al. A RESTful API for accessing microbial community data for MG-RAST. PLoS Comput Biol 2015;11:e1004008.
-
(2015)
PLoS Comput Biol
, vol.11
, pp. e1004008
-
-
Wilke, A.1
Bischof, J.2
Harrison, T.3
-
27
-
-
84937252193
-
Antibiotics, antibiotic resistance genes, and bacterial community composition in fresh water aquaculture environment in China
-
Xiong W, Sun Y, Zhang T, et al. Antibiotics, antibiotic resistance genes, and bacterial community composition in fresh water aquaculture environment in China. Microb Ecol 2015;70:1-8.
-
(2015)
Microb Ecol
, vol.70
, pp. 1-8
-
-
Xiong, W.1
Sun, Y.2
Zhang, T.3
-
28
-
-
84861116189
-
Functional cloning and characterization of antibiotic resistance genes from the chicken gut microbiome
-
Zhou W, Wang Y, Lin J. Functional cloning and characterization of antibiotic resistance genes from the chicken gut microbiome. Appl Environ Microbiol 2012;78:3028-3032.
-
(2012)
Appl Environ Microbiol
, vol.78
, pp. 3028-3032
-
-
Zhou, W.1
Wang, Y.2
Lin, J.3
|