Cilantro microbiome before and after nonselective pre-enrichment for Salmonella using 16S rRNA and metagenomic sequencing

BMC Microbiology

Volumn 15, Issue 1, 2015, Pages

  Jarvis, Karen G ^a   White, James R ^b   Grim, Christopher J ^a,b   Ewing, Laura ^a   Ottesen, Andrea R ^a   Beaubrun, Junia Jean Gilles ^a   Pettengill, James B ^a   Brown, Eric ^a   Hanes, Darcy E ^a  

^a CENTER FOR DRUG EVALUATION AND RESEARCH   (United States)

^b Oak Ridge Institute for Science Education   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

GENOMIC DNA; RNA 16S; BACTERIAL DNA; RIBOSOME DNA;

AMPLICON; ARTICLE; BACTERIAL GENOME; BACTERIUM CONTAMINATION; BACTERIUM IDENTIFICATION; CONTROLLED STUDY; CORIANDER; ENTEROBACTERIACEAE; GENE FUNCTION; GENE IDENTIFICATION; GENETIC VARIABILITY; HOST PATHOGEN INTERACTION; METAGENOMICS; MICROBIAL COMMUNITY; MICROBIOME; NONHUMAN; POPULATION ABUNDANCE; PYROSEQUENCING; RNA SEQUENCE; SALMONELLA; SEQUENCE ANALYSIS; SPECIES DIVERSITY; TAXONOMIC IDENTIFICATION; CHEMISTRY; CLUSTER ANALYSIS; CORIANDRUM; DNA SEQUENCE; GENETICS; HIGH THROUGHPUT SEQUENCING; ISOLATION AND PURIFICATION; METAGENOME; MICROBIOLOGICAL EXAMINATION; MICROBIOLOGY; MICROFLORA; MOLECULAR GENETICS; PHYLOGENY; SALMONELLA ENTERICA; UNITED STATES;

ENTEROBACTERIACEAE; FIRMICUTES; POSIBACTERIA; PROTEOBACTERIA; SALMONELLA; SALMONELLA ENTERICA;

CLUSTER ANALYSIS; CORIANDRUM; DNA, BACTERIAL; DNA, RIBOSOMAL; HIGH-THROUGHPUT NUCLEOTIDE SEQUENCING; METAGENOME; MICROBIOLOGICAL TECHNIQUES; MICROBIOTA; MOLECULAR SEQUENCE DATA; PHYLOGENY; RNA, RIBOSOMAL, 16S; SALMONELLA ENTERICA; SEQUENCE ANALYSIS, DNA; UNITED STATES;

EID: 84938911080     PISSN: None     EISSN: 14712180     Source Type: Journal    
DOI: 10.1186/s12866-015-0497-2     Document Type: Article

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