메뉴 건너뛰기




Volumn 7, Issue , 2015, Pages

The hunt for origins of DNA replication in multicellular eukaryotes

Author keywords

[No Author keywords available]

Indexed keywords

5 (2 BROMOVINYL) 2' DEOXYURIDINE; DIHYDROFOLATE REDUCTASE; DNA; EXONUCLEASE; GUANINE QUADRUPLEX; LAMBDA EXONUCLEASE; ORIGIN RECOGNITION COMPLEX; UNCLASSIFIED DRUG;

EID: 84924565490     PISSN: 20517599     EISSN: 20517599     Source Type: Journal    
DOI: 10.12703/P7-30     Document Type: Article
Times cited : (25)

References (172)
  • 1
    • 0035997368 scopus 로고    scopus 로고
    • DNA replication in eukaryotic cells
    • Bell SP, Dutta A: DNA replication in eukaryotic cells. Annu Rev Biochem 2002, 71:333-74.
    • (2002) Annu Rev Biochem , vol.71 , pp. 333-374
    • Bell, S.P.1    Dutta, A.2
  • 5
    • 0032562610 scopus 로고    scopus 로고
    • Formation of a preinitiation complex by S-phase cyclin CDK-dependent loading of Cdc45p onto chromatin
    • Zou L, Stillman B: Formation of a preinitiation complex by S-phase cyclin CDK-dependent loading of Cdc45p onto chromatin. Science 1998, 280:593-6.
    • (1998) Science , vol.280 , pp. 593-596
    • Zou, L.1    Stillman, B.2
  • 6
    • 74749095240 scopus 로고    scopus 로고
    • Activation of the MCM2-7 helicase by association with Cdc45 and GINS proteins
    • Ilves I, Petojevic T, Pesavento JJ, Botchan MR: Activation of the MCM2-7 helicase by association with Cdc45 and GINS proteins. Mol Cell 2010, 37:247-58.
    • (2010) Mol Cell , vol.37 , pp. 247-258
    • Ilves, I.1    Petojevic, T.2    Pesavento, J.J.3    Botchan, M.R.4
  • 8
    • 79953220813 scopus 로고    scopus 로고
    • MCM2-7 form double hexamers at licensed origins in Xenopus egg extract
    • Gambus A, Khoudoli GA, Jones RC, Blow JJ: MCM2-7 form double hexamers at licensed origins in Xenopus egg extract. J Biol Chem 2011, 286:11855-64.
    • (2011) J Biol Chem , vol.286 , pp. 11855-11864
    • Gambus, A.1    Khoudoli, G.A.2    Jones, R.C.3    Blow, J.J.4
  • 9
    • 0013887376 scopus 로고
    • Autoradiography of chromosomal DNA fibers from Chinese hamster cells
    • Huberman JA, Riggs AD: Autoradiography of chromosomal DNA fibers from Chinese hamster cells. Proc Natl Acad Sci USA 1966, 55:599-606.
    • (1966) Proc Natl Acad Sci USA , vol.55 , pp. 599-606
    • Huberman, J.A.1    Riggs, A.D.2
  • 10
    • 0014413470 scopus 로고
    • On the mechanism of DNA replication in mammalian chromosomes
    • Huberman JA, Riggs AD: On the mechanism of DNA replication in mammalian chromosomes. J Mol Biol 1968, 32:327-41.
    • (1968) J Mol Biol , vol.32 , pp. 327-341
    • Huberman, J.A.1    Riggs, A.D.2
  • 11
    • 0024564516 scopus 로고
    • Isolation of human sequences that replicate autonomously in human cells
    • Krysan PJ, Haase SB, Calos MP: Isolation of human sequences that replicate autonomously in human cells. Mol Cell Biol 1989, 9:1026-33.
    • (1989) Mol Cell Biol , vol.9 , pp. 1026-1033
    • Krysan, P.J.1    Haase, S.B.2    Calos, M.P.3
  • 12
    • 0026016255 scopus 로고
    • Autonomous DNA replication in human cells is affected by the size and the source of the DNA
    • Heinzel SS, Krysan PJ, Tran CT, Calos MP: Autonomous DNA replication in human cells is affected by the size and the source of the DNA. Mol Cell Biol 1991, 11:2263-72.
    • (1991) Mol Cell Biol , vol.11 , pp. 2263-2272
    • Heinzel, S.S.1    Krysan, P.J.2    Tran, C.T.3    Calos, M.P.4
  • 13
    • 0018952783 scopus 로고
    • Regulated replication of DNA microinjected into eggs of Xenopus laevis
    • Harland RM, Laskey RA: Regulated replication of DNA microinjected into eggs of Xenopus laevis. Cell 1980, 21:761-71.
    • (1980) Cell , vol.21 , pp. 761-771
    • Harland, R.M.1    Laskey, R.A.2
  • 14
    • 0019954828 scopus 로고
    • An amplified chromosomal sequence that includes the gene for dihydrofolate reductase initiates replication within specific restriction fragments
    • Heintz NH, Hamlin JL: An amplified chromosomal sequence that includes the gene for dihydrofolate reductase initiates replication within specific restriction fragments. Proc Natl Acad Sci USA 1982, 79:4083-7.
    • (1982) Proc Natl Acad Sci USA , vol.79 , pp. 4083-4087
    • Heintz, N.H.1    Hamlin, J.L.2
  • 15
    • 0023031898 scopus 로고
    • Isolation of the origin of replication associated with the amplified Chinese hamster dihydrofolate reductase domain
    • Burhans WC, Selegue JE, Heintz NH: Isolation of the origin of replication associated with the amplified Chinese hamster dihydrofolate reductase domain. Proc Natl Acad Sci USA 1986, 83:7790-4.
    • (1986) Proc Natl Acad Sci USA , vol.83 , pp. 7790-7794
    • Burhans, W.C.1    Selegue, J.E.2    Heintz, N.H.3
  • 16
    • 0027370672 scopus 로고
    • Chromosomal replication initiates and terminates at random sequences but at regular intervals in the ribosomal DNA of Xenopus early embryos
    • Hyrien O, Méchali M: Chromosomal replication initiates and terminates at random sequences but at regular intervals in the ribosomal DNA of Xenopus early embryos. EMBO J 1993, 12:4511-20.
    • (1993) EMBO J , vol.12 , pp. 4511-4520
    • Hyrien, O.1    Méchali, M.2
  • 17
    • 0035825156 scopus 로고    scopus 로고
    • Replication origins in Xenopus egg extract Are 5-15 kilobases apart and are activated in clusters that fire at different times
    • Blow JJ, Gillespie PJ, Francis D, Jackson DA: Replication origins in Xenopus egg extract Are 5-15 kilobases apart and are activated in clusters that fire at different times. J Cell Biol 2001, 152:15-25.
    • (2001) J Cell Biol , vol.152 , pp. 15-25
    • Blow, J.J.1    Gillespie, P.J.2    Francis, D.3    Jackson, D.A.4
  • 18
    • 0028829358 scopus 로고
    • Transition in specification of embryonic metazoan DNA replication origins
    • Hyrien O, Maric C, Méchali M: Transition in specification of embryonic metazoan DNA replication origins. Science 1995, 270:994-7.
    • (1995) Science , vol.270 , pp. 994-997
    • Hyrien, O.1    Maric, C.2    Méchali, M.3
  • 19
    • 0031278994 scopus 로고    scopus 로고
    • The search for origins of DNA replication
    • DePamphilis ML: The search for origins of DNA replication. Methods 1997, 13:211-9.
    • (1997) Methods , vol.13 , pp. 211-219
    • DePamphilis, M.L.1
  • 20
    • 0025178839 scopus 로고
    • Mapping an origin of DNA replication at a single-copy locus in exponentially proliferating mammalian cells
    • Vassilev LT, Burhans WC, DePamphilis ML: Mapping an origin of DNA replication at a single-copy locus in exponentially proliferating mammalian cells. Mol Cell Biol 1990, 10:4685-9.
    • (1990) Mol Cell Biol , vol.10 , pp. 4685-4689
    • Vassilev, L.T.1    Burhans, W.C.2    DePamphilis, M.L.3
  • 21
    • 0029789679 scopus 로고    scopus 로고
    • High-resolution mapping of the origin of DNA replication in the hamster dihydrofolate reductase gene domain by competitive PCR
    • Pelizon C, Diviacco S, Falaschi A, Giacca M: High-resolution mapping of the origin of DNA replication in the hamster dihydrofolate reductase gene domain by competitive PCR. Mol Cell Biol 1996, 16:5358-64.
    • (1996) Mol Cell Biol , vol.16 , pp. 5358-5364
    • Pelizon, C.1    Diviacco, S.2    Falaschi, A.3    Giacca, M.4
  • 22
    • 0031815995 scopus 로고    scopus 로고
    • Identification of primary initiation sites for DNA replication in the hamster dihydrofolate reductase gene initiation zone
    • Kobayashi T, Rein T, DePamphilis ML: Identification of primary initiation sites for DNA replication in the hamster dihydrofolate reductase gene initiation zone. Mol Cell Biol 1998, 18:3266-77.
    • (1998) Mol Cell Biol , vol.18 , pp. 3266-3277
    • Kobayashi, T.1    Rein, T.2    DePamphilis, M.L.3
  • 23
    • 0023646792 scopus 로고
    • The localization of replication origins on ARS plasmids in S. Cerevisiae
    • Brewer BJ, Fangman WL: The localization of replication origins on ARS plasmids in S. cerevisiae. Cell 1987, 51:463-71.
    • (1987) Cell , vol.51 , pp. 463-471
    • Brewer, B.J.1    Fangman, W.L.2
  • 25
    • 0023883787 scopus 로고
    • Two-dimensional gel electrophoretic method formapping DNA replicons
    • Nawotka KA, Huberman JA: Two-dimensional gel electrophoretic method formapping DNA replicons. Mol Cell Biol 1988, 8:1408-13.
    • (1988) Mol Cell Biol , vol.8 , pp. 1408-1413
    • Nawotka, K.A.1    Huberman, J.A.2
  • 27
    • 34447565003 scopus 로고    scopus 로고
    • Replication in context: Dynamic regulation of DNA replication patterns in metazoans
    • Aladjem MI: Replication in context: dynamic regulation of DNA replication patterns in metazoans. Nat Rev Genet 2007, 8:588-600.
    • (2007) Nat Rev Genet , vol.8 , pp. 588-600
    • Aladjem, M.I.1
  • 30
    • 0035861512 scopus 로고    scopus 로고
    • Visualization of DNA replication on individual Epstein-Barr virus episomes
    • Norio P, Schildkraut CL: Visualization of DNA replication on individual Epstein-Barr virus episomes. Science 2001, 294:2361-4.
    • (2001) Science , vol.294 , pp. 2361-2364
    • Norio, P.1    Schildkraut, C.L.2
  • 33
    • 0032752071 scopus 로고    scopus 로고
    • Single molecule analysis of DNA replication
    • Herrick J, Bensimon A: Single molecule analysis of DNA replication. Biochimie 1999, 81:859-71.
    • (1999) Biochimie , vol.81 , pp. 859-871
    • Herrick, J.1    Bensimon, A.2
  • 34
    • 68349132122 scopus 로고    scopus 로고
    • Introduction to molecular combing: Genomics, DNA replication, and cancer
    • Herrick J, Bensimon A: Introduction to molecular combing: genomics, DNA replication, and cancer. Methods Mol Biol 2009, 521:71-101.
    • (2009) Methods Mol Biol , vol.521 , pp. 71-101
    • Herrick, J.1    Bensimon, A.2
  • 37
    • 0036791653 scopus 로고    scopus 로고
    • Single-molecule analysis reveals clustering and epigenetic regulation of replication origins at the yeast rDNA locus
    • Pasero P, Bensimon A, Schwob E: Single-molecule analysis reveals clustering and epigenetic regulation of replication origins at the yeast rDNA locus. Genes Dev 2002, 16:2479-84.
    • (2002) Genes Dev , vol.16 , pp. 2479-2484
    • Pasero, P.1    Bensimon, A.2    Schwob, E.3
  • 39
    • 0042743766 scopus 로고    scopus 로고
    • Dynamics of DNA replication in mammalian somatic cells: Nucleotide pool modulates origin choice and interorigin spacing
    • Anglana M, Apiou F, Bensimon A, Debatisse M: Dynamics of DNA replication in mammalian somatic cells: nucleotide pool modulates origin choice and interorigin spacing. Cell 2003, 114:385-94.
    • (2003) Cell , vol.114 , pp. 385-394
    • Anglana, M.1    Apiou, F.2    Bensimon, A.3    Debatisse, M.4
  • 40
    • 33845405316 scopus 로고    scopus 로고
    • DNA replication origin interference increases the spacing between initiation events in human cells
    • Lebofsky R, Heilig R, Sonnleitner M, Weissenbach J, Bensimon A: DNA replication origin interference increases the spacing between initiation events in human cells. Mol Biol Cell 2006, 17:5337-45.
    • (2006) Mol Biol Cell , vol.17 , pp. 5337-5345
    • Lebofsky, R.1    Heilig, R.2    Sonnleitner, M.3    Weissenbach, J.4    Bensimon, A.5
  • 41
    • 23444434202 scopus 로고    scopus 로고
    • A genomic view of eukaryotic DNA replication
    • MacAlpine DM, Bell SP: A genomic view of eukaryotic DNA replication. Chromosome Res 2005, 13:309-26.
    • (2005) Chromosome Res , vol.13 , pp. 309-326
    • MacAlpine, D.M.1    Bell, S.P.2
  • 42
    • 77956879643 scopus 로고    scopus 로고
    • Evaluating genome-scale approaches to eukaryotic DNA replication
    • Gilbert DM: Evaluating genome-scale approaches to eukaryotic DNA replication. Nat Rev Genet 2010, 11:673-84.
    • (2010) Nat Rev Genet , vol.11 , pp. 673-684
    • Gilbert, D.M.1
  • 44
    • 84865542810 scopus 로고    scopus 로고
    • Genome-wide localization of replication factors
    • Lubelsky Y, MacAlpine HK, MacAlpine DM: Genome-wide localization of replication factors. Methods 2012, 57:187-95.
    • (2012) Methods , vol.57 , pp. 187-195
    • Lubelsky, Y.1    MacAlpine, H.K.2    MacAlpine, D.M.3
  • 46
    • 34547236841 scopus 로고    scopus 로고
    • Genome-wide mapping of ORC and Mcm2p binding sites on tiling arrays and identification of essential ARS consensus sequences in S. Cerevisiae
    • Xu W, Aparicio JG, Aparicio OM, Tavaré S: Genome-wide mapping of ORC and Mcm2p binding sites on tiling arrays and identification of essential ARS consensus sequences in S. cerevisiae. BMC Genomics 2006, 7:276.
    • (2006) BMC Genomics , vol.7 , pp. 276
    • Xu, W.1    Aparicio, J.G.2    Aparicio, O.M.3    Tavaré, S.4
  • 47
  • 48
    • 84871992012 scopus 로고    scopus 로고
    • GiaccaM, Pelicci PG: Genome-widemapping of human DNA-replication origins: Levels of transcription at ORC1 sites regulate origin selection and replication timing
    • Dellino GI, Cittaro D, Piccioni R, Luzi L, Banfi S, Segalla S, Cesaroni M, Mendoza-Maldonado R,GiaccaM, Pelicci PG: Genome-widemapping of human DNA-replication origins: levels of transcription at ORC1 sites regulate origin selection and replication timing. Genome Res 2013, 23:1-11.
    • (2013) Genome Res , vol.23 , pp. 1-11
    • Dellino, G.I.1    Cittaro, D.2    Piccioni, R.3    Luzi, L.4    Banfi, S.5    Segalla, S.6    Cesaroni, M.7    Mendoza-Maldonado, R.8
  • 49
    • 77649236880 scopus 로고    scopus 로고
    • Why are we where we are? Understanding replication origins and initiation sites in eukaryotes using ChIP-approaches
    • Schepers A, Papior P: Why are we where we are? Understanding replication origins and initiation sites in eukaryotes using ChIP-approaches. Chromosome Res 2010, 18:63-77.
    • (2010) Chromosome Res , vol.18 , pp. 63-77
    • Schepers, A.1    Papior, P.2
  • 50
    • 33846240855 scopus 로고    scopus 로고
    • Multiple functions of the origin recognition complex
    • Chesnokov IN: Multiple functions of the origin recognition complex. Int Rev Cytol 2007, 256:69-109.
    • (2007) Int Rev Cytol , vol.256 , pp. 69-109
    • Chesnokov, I.N.1
  • 52
    • 59849095061 scopus 로고    scopus 로고
    • Orc1 controls centriole and centrosome copy number in human cells
    • Hemerly AS, Prasanth SG, Siddiqui K, Stillman B: Orc1 controls centriole and centrosome copy number in human cells. Science 2009, 323:789-93.
    • (2009) Science , vol.323 , pp. 789-793
    • Hemerly, A.S.1    Prasanth, S.G.2    Siddiqui, K.3    Stillman, B.4
  • 53
    • 77957011803 scopus 로고    scopus 로고
    • Human origin recognition complex is essential for HP1 binding to chromatin and heterochromatin organization
    • Prasanth SG, Shen Z, Prasanth KV, Stillman B: Human origin recognition complex is essential for HP1 binding to chromatin and heterochromatin organization. Proc Natl Acad Sci USA 2010, 107:15093-8.
    • (2010) Proc Natl Acad Sci USA , vol.107 , pp. 15093-15098
    • Prasanth, S.G.1    Shen, Z.2    Prasanth, K.V.3    Stillman, B.4
  • 54
    • 79958750543 scopus 로고    scopus 로고
    • ORCanization " on heterochromatin: Linking DNA replication initiation to chromatin organization
    • Chakraborty A, Shen Z, Prasanth SG: "ORCanization " on heterochromatin: linking DNA replication initiation to chromatin organization. Epigenetics 2011, 6:665-70.
    • (2011) Epigenetics , vol.6 , pp. 665-670
    • Chakraborty, A.1    Shen, Z.2    Prasanth, S.G.3
  • 55
    • 0037319618 scopus 로고    scopus 로고
    • Paradoxes of eukaryotic DNA replication: MCM proteins and the random completion problem
    • Hyrien O, Marheineke K, Goldar A: Paradoxes of eukaryotic DNA replication: MCM proteins and the random completion problem. Bioessays 2003, 25:116-25.
    • (2003) Bioessays , vol.25 , pp. 116-125
    • Hyrien, O.1    Marheineke, K.2    Goldar, A.3
  • 56
    • 79961170861 scopus 로고    scopus 로고
    • How dormant origins promote complete genome replication
    • Blow JJ, Ge XQ, Jackson DA: How dormant origins promote complete genome replication. Trends Biochem Sci 2011, 36:405-14.
    • (2011) Trends Biochem Sci , vol.36 , pp. 405-414
    • Blow, J.J.1    Ge, X.Q.2    Jackson, D.A.3
  • 57
    • 0029831706 scopus 로고    scopus 로고
    • ORC- and Cdc6-dependent complexes at active and inactive chromosomal replication origins in Saccharomyces cerevisiae
    • Santocanale C, Diffley JF: ORC- and Cdc6-dependent complexes at active and inactive chromosomal replication origins in Saccharomyces cerevisiae. EMBO J 1996, 15:6671-9.
    • (1996) EMBO J , vol.15 , pp. 6671-6679
    • Santocanale, C.1    Diffley, J.F.2
  • 58
    • 34547637896 scopus 로고    scopus 로고
    • Le Beau, Michelle M: High-throughput mapping of origins of replication in human cells
    • Lucas I, Palakodeti A, Jiang Y, Young DJ, Jiang N, Fernald AA, Le Beau, Michelle M: High-throughput mapping of origins of replication in human cells. EMBO Rep 2007, 8:770-7.
    • (2007) EMBO Rep , vol.8 , pp. 770-777
    • Lucas, I.1    Palakodeti, A.2    Jiang, Y.3    Young, D.J.4    Jiang, N.5    Fernald, A.A.6
  • 59
    • 76049105950 scopus 로고    scopus 로고
    • Genomic study of replication initiation in human chromosomes reveals the influence of transcription regulation and chromatin structure on origin selection
    • Karnani N, Taylor CM, Malhotra A, Dutta A: Genomic study of replication initiation in human chromosomes reveals the influence of transcription regulation and chromatin structure on origin selection. Mol Biol Cell 2010, 21:393-404.
    • (2010) Mol Biol Cell , vol.21 , pp. 393-404
    • Karnani, N.1    Taylor, C.M.2    Malhotra, A.3    Dutta, A.4
  • 65
    • 33344470620 scopus 로고    scopus 로고
    • Isolating apparently pure libraries of replication origins from complex genomes
    • Mesner LD, Crawford EL, Hamlin JL: Isolating apparently pure libraries of replication origins from complex genomes. Mol Cell 2006, 21:719-26.
    • (2006) Mol Cell , vol.21 , pp. 719-726
    • Mesner, L.D.1    Crawford, E.L.2    Hamlin, J.L.3
  • 66
    • 68349148701 scopus 로고    scopus 로고
    • Purification of restriction fragments containing replication intermediates from complex genomes for 2-D gel analysis
    • Mesner LD, Dijkwel PA, Hamlin JL: Purification of restriction fragments containing replication intermediates from complex genomes for 2-D gel analysis. Methods Mol Biol 2009, 521:121-37.
    • (2009) Methods Mol Biol , vol.521 , pp. 121-137
    • Mesner, L.D.1    Dijkwel, P.A.2    Hamlin, J.L.3
  • 67
    • 79952270733 scopus 로고    scopus 로고
    • Bubble-chip analysis of human origin distributions demonstrates on a genomic scale significant clustering into zones and significant association with transcription
    • Mesner LD, Valsakumar V, Karnani N, Dutta A, Hamlin JL, Bekiranov S: Bubble-chip analysis of human origin distributions demonstrates on a genomic scale significant clustering into zones and significant association with transcription. Genome Res 2011, 21:377-89.
    • (2011) Genome Res , vol.21 , pp. 377-389
    • Mesner, L.D.1    Valsakumar, V.2    Karnani, N.3    Dutta, A.4    Hamlin, J.L.5    Bekiranov, S.6
  • 68
    • 84887404285 scopus 로고    scopus 로고
    • Bubble-seq analysis of the human genome reveals distinct chromatin-mediated mechanisms for regulating early- and late-firing origins
    • Mesner LD, Valsakumar V, Cieslik M, Pickin R, Hamlin JL, Bekiranov S: Bubble-seq analysis of the human genome reveals distinct chromatin-mediated mechanisms for regulating early- and late-firing origins. Genome Res 2013, 23:1774-88.
    • (2013) Genome Res , vol.23 , pp. 1774-1788
    • Mesner, L.D.1    Valsakumar, V.2    Cieslik, M.3    Pickin, R.4    Hamlin, J.L.5    Bekiranov, S.6
  • 69
    • 50849104741 scopus 로고    scopus 로고
    • Detection of circular telomeric DNA without 2D gel electrophoresis
    • Dlaska M, Anderl C, Eisterer W, Bechter OE: Detection of circular telomeric DNA without 2D gel electrophoresis. DNA Cell Biol 2008, 27:489-96.
    • (2008) DNA Cell Biol , vol.27 , pp. 489-496
    • Dlaska, M.1    Anderl, C.2    Eisterer, W.3    Bechter, O.E.4
  • 70
    • 67849121611 scopus 로고    scopus 로고
    • Extrachromosomal circular DNA in eukaryotes: Possible involvement in the plasticity of tandem repeats
    • Cohen S, Segal D: Extrachromosomal circular DNA in eukaryotes: possible involvement in the plasticity of tandem repeats. Cytogenet Genome Res 2009, 124:327-38.
    • (2009) Cytogenet Genome Res , vol.124 , pp. 327-338
    • Cohen, S.1    Segal, D.2
  • 71
    • 77956382115 scopus 로고    scopus 로고
    • Extrachromosomal circles of satellite repeats and 5S ribosomal DNA in human cells
    • Cohen S, Agmon N, Sobol O, Segal D: Extrachromosomal circles of satellite repeats and 5S ribosomal DNA in human cells. Mobile DNA 2010, 1:11.
    • (2010) Mobile DNA , vol.1 , pp. 11
    • Cohen, S.1    Agmon, N.2    Sobol, O.3    Segal, D.4
  • 73
    • 0024336294 scopus 로고
    • Mapping replication units in animal cells
    • Handeli S, Klar A, Meuth M, Cedar H: Mapping replication units in animal cells. Cell 1989, 57:909-20.
    • (1989) Cell , vol.57 , pp. 909-920
    • Handeli, S.1    Klar, A.2    Meuth, M.3    Cedar, H.4
  • 74
    • 0025931653 scopus 로고
    • Emetine allows identification of origins of mammalian DNA replication by imbalanced DNA synthesis, not through conservative nucleosome segregation
    • Burhans WC, Vassilev LT, Wu J, Sogo JM, Nallaseth FS, DePamphilis ML: Emetine allows identification of origins of mammalian DNA replication by imbalanced DNA synthesis, not through conservative nucleosome segregation. EMBO J 1991, 10:4351-60.
    • (1991) EMBO J , vol.10 , pp. 4351-4360
    • Burhans, W.C.1    Vassilev, L.T.2    Wu, J.3    Sogo, J.M.4    Nallaseth, F.S.5    DePamphilis, M.L.6
  • 75
    • 0025073066 scopus 로고
    • Identification of an origin of bidirectional DNA replication in mammalian chromosomes
    • Burhans WC, Vassilev LT, Caddle MS, Heintz NH, DePamphilis ML: Identification of an origin of bidirectional DNA replication in mammalian chromosomes. Cell 1990, 62:955-65.
    • (1990) Cell , vol.62 , pp. 955-965
    • Burhans, W.C.1    Vassilev, L.T.2    Caddle, M.S.3    Heintz, N.H.4    DePamphilis, M.L.5
  • 76
    • 0020118996 scopus 로고
    • Initiation of SV40 DNA replication in vivo: Location and structure of 50 ends of DNA synthesized in the ori region
    • Hay RT, DePamphilis ML: Initiation of SV40 DNA replication in vivo: location and structure of 50 ends of DNA synthesized in the ori region. Cell 1982, 28:767-79.
    • (1982) Cell , vol.28 , pp. 767-779
    • Hay, R.T.1    DePamphilis, M.L.2
  • 78
    • 84862776917 scopus 로고    scopus 로고
    • Intrinsic coupling of lagging-strand synthesis to chromatin assembly
    • Smith DJ, Whitehouse I: Intrinsic coupling of lagging-strand synthesis to chromatin assembly. Nature 2012, 483:434-8.
    • (2012) Nature , vol.483 , pp. 434-438
    • Smith, D.J.1    Whitehouse, I.2
  • 79
    • 84876073691 scopus 로고    scopus 로고
    • Quantitative, genome-wide analysis of eukaryotic replication initiation and termination
    • McGuffee SR, Smith DJ, Whitehouse I: Quantitative, genome-wide analysis of eukaryotic replication initiation and termination. Mol Cell 2013, 50:123-35.
    • (2013) Mol Cell , vol.50 , pp. 123-135
    • McGuffee, S.R.1    Smith, D.J.2    Whitehouse, I.3
  • 80
    • 0031278995 scopus 로고    scopus 로고
    • Replication initiation point mapping
    • Gerbi SA, Bielinsky AK: Replication initiation point mapping. Methods 1997, 13:271-80.
    • (1997) Methods , vol.13 , pp. 271-280
    • Gerbi, S.A.1    Bielinsky, A.K.2
  • 81
    • 0032472223 scopus 로고    scopus 로고
    • Discrete start sites for DNA synthesis in the yeast ARS1 origin
    • Bielinsky AK, Gerbi SA: Discrete start sites for DNA synthesis in the yeast ARS1 origin. Science 1998, 279:95-8.
    • (1998) Science , vol.279 , pp. 95-98
    • Bielinsky, A.K.1    Gerbi, S.A.2
  • 83
    • 16644370790 scopus 로고    scopus 로고
    • Mapping origins of DNA replication in eukaryotes
    • Gerbi SA: Mapping origins of DNA replication in eukaryotes. Methods Mol Biol 2005, 296:167-80.
    • (2005) Methods Mol Biol , vol.296 , pp. 167-180
    • Gerbi, S.A.1
  • 84
    • 68349138319 scopus 로고    scopus 로고
    • Replication initiation point mapping: Approach and implications
    • Das-Bradoo S, Bielinsky A: Replication initiation point mapping: approach and implications. Methods Mol Biol 2009, 521:105-20.
    • (2009) Methods Mol Biol , vol.521 , pp. 105-120
    • Das-Bradoo, S.1    Bielinsky, A.2
  • 85
    • 0033120953 scopus 로고    scopus 로고
    • Chromosomal ARS1 has a single leading strand start site
    • Bielinsky AK, Gerbi SA: Chromosomal ARS1 has a single leading strand start site. Mol Cell 1999, 3:477-86.
    • (1999) Mol Cell , vol.3 , pp. 477-486
    • Bielinsky, A.K.1    Gerbi, S.A.2
  • 86
    • 0033570158 scopus 로고    scopus 로고
    • Organization of DNA replication origins in the fission yeast genome
    • Gómez M, Antequera F: Organization of DNA replication origins in the fission yeast genome. EMBO J 1999, 18:5683-90.
    • (1999) EMBO J , vol.18 , pp. 5683-5690
    • Gómez, M.1    Antequera, F.2
  • 89
    • 0013924499 scopus 로고
    • Regulation of lambda exonuclease. I. Properties of lambda exonuclease purified from lysogens of lambda T11 and wild type
    • Radding CM: Regulation of lambda exonuclease. I. Properties of lambda exonuclease purified from lysogens of lambda T11 and wild type. J Mol Biol 1966, 18:235-50.
    • (1966) J Mol Biol , vol.18 , pp. 235-250
    • Radding, C.M.1
  • 90
    • 0014216084 scopus 로고
    • An exonuclease induced by bacteriophage lambda. II. Nature of the enzymatic reaction
    • Little JW: An exonuclease induced by bacteriophage lambda. II. Nature of the enzymatic reaction. J Biol Chem 1967, 242:679-86.
    • (1967) J Biol Chem , vol.242 , pp. 679-686
    • Little, J.W.1
  • 91
    • 58749117206 scopus 로고    scopus 로고
    • One-way PCR-based mapping of a replication initiation point (RIP)
    • Romero J, Lee H: One-way PCR-based mapping of a replication initiation point (RIP). Nat Protoc 2008, 3:1729-35.
    • (2008) Nat Protoc , vol.3 , pp. 1729-1735
    • Romero, J.1    Lee, H.2
  • 92
  • 99
    • 84864690009 scopus 로고    scopus 로고
    • Unraveling cell type-specific and reprogrammable human replication origin signatures associated with Gquadruplex consensus motifs
    • Besnard E, Babled A, Lapasset L, Milhavet O, Parrinello H, Dantec C, Marin J, Lemaitre J: Unraveling cell type-specific and reprogrammable human replication origin signatures associated with Gquadruplex consensus motifs. Nat Struct Mol Biol 2012, 19:837-44.
    • (2012) Nat Struct Mol Biol , vol.19 , pp. 837-844
    • Besnard, E.1    Babled, A.2    Lapasset, L.3    Milhavet, O.4    Parrinello, H.5    Dantec, C.6    Marin, J.7    Lemaitre, J.8
  • 100
    • 84924634587 scopus 로고    scopus 로고
    • Characterizing and controlling intrinsic biases of Lambda exonuclease in nascent strand sequencing reveals phasing between nucleosomes and G-quadruplex motifs around a subset of human replication origins
    • in press
    • Foulk MS, Urban JM, Casella C and Gerbi SA: Characterizing and controlling intrinsic biases of Lambda exonuclease in nascent strand sequencing reveals phasing between nucleosomes and G-quadruplex motifs around a subset of human replication origins. Genome Res 2015, in press.
    • (2015) Genome Res
    • Foulk, M.S.1    Urban, J.M.2    Casella, C.3    Gerbi, S.A.4
  • 101
    • 84901599268 scopus 로고    scopus 로고
    • The spatiotemporal program of DNA replication is associated with specific combinations of chromatin marks in human cells
    • Picard F, Cadoret J, Audit B, Arneodo A, Alberti A, Battail C, Duret L, Prioleau M: The spatiotemporal program of DNA replication is associated with specific combinations of chromatin marks in human cells. PLoS Genet 2014, 10:e1004282.
    • (2014) PLoS Genet , vol.10 , pp. e1004282
    • Picard, F.1    Cadoret, J.2    Audit, B.3    Arneodo, A.4    Alberti, A.5    Battail, C.6    Duret, L.7    Prioleau, M.8
  • 102
    • 0141534308 scopus 로고    scopus 로고
    • Sequence-dependent pausing of single lambda exonuclease molecules
    • Perkins TT, Dalal RV, Mitsis PG, Block SM: Sequence-dependent pausing of single lambda exonuclease molecules. Science 2003, 301:1914-8.
    • (2003) Science , vol.301 , pp. 1914-1918
    • Perkins, T.T.1    Dalal, R.V.2    Mitsis, P.G.3    Block, S.M.4
  • 104
    • 73649106535 scopus 로고    scopus 로고
    • Lambda exonuclease digestion of CGG trinucleotide repeats
    • Conroy RS, Koretsky AP, Moreland J: Lambda exonuclease digestion of CGG trinucleotide repeats. Eur Biophys J 2010, 39:337-43.
    • (2010) Eur Biophys J , vol.39 , pp. 337-343
    • Conroy, R.S.1    Koretsky, A.P.2    Moreland, J.3
  • 105
    • 34250633242 scopus 로고    scopus 로고
    • An exonuclease I hydrolysis assay for evaluating G-quadruplex stabilization by small molecules
    • Yao Y, Wang Q, Hao Y, Tan Z: An exonuclease I hydrolysis assay for evaluating G-quadruplex stabilization by small molecules. Nucleic Acids Res 2007, 35:e68.
    • (2007) Nucleic Acids Res , vol.35 , pp. e68
    • Yao, Y.1    Wang, Q.2    Hao, Y.3    Tan, Z.4
  • 106
    • 0033556134 scopus 로고    scopus 로고
    • A DNA polymerase stop assay for G-quadruplex-interactive compounds
    • Han H, Hurley LH, Salazar M: A DNA polymerase stop assay for G-quadruplex-interactive compounds. Nucleic Acids Res 1999, 27:537-42.
    • (1999) Nucleic Acids Res , vol.27 , pp. 537-542
    • Han, H.1    Hurley, L.H.2    Salazar, M.3
  • 108
    • 84921329939 scopus 로고    scopus 로고
    • How the misincorporation of ribonucleotides into genomic DNA can be both harmful and helpful to cells
    • Potenski CJ, Klein HL: How the misincorporation of ribonucleotides into genomic DNA can be both harmful and helpful to cells. Nucleic Acids Res 2014, 42:10226-34.
    • (2014) Nucleic Acids Res , vol.42 , pp. 10226-10234
    • Potenski, C.J.1    Klein, H.L.2
  • 109
    • 84880697144 scopus 로고    scopus 로고
    • Next-generation sequencing of Okazaki fragments extracted from Saccharomyces cerevisiae
    • Yang W, Li X: Next-generation sequencing of Okazaki fragments extracted from Saccharomyces cerevisiae. FEBS Lett 2013, 587:2441-7.
    • (2013) FEBS Lett , vol.587 , pp. 2441-2447
    • Yang, W.1    Li, X.2
  • 110
    • 4444384150 scopus 로고    scopus 로고
    • The replicon revisited: An old model learns new tricks in metazoan chromosomes
    • Aladjem MI, Fanning E: The replicon revisited: an old model learns new tricks in metazoan chromosomes. EMBO Rep 2004, 5:686-91.
    • (2004) EMBO Rep , vol.5 , pp. 686-691
    • Aladjem, M.I.1    Fanning, E.2
  • 111
    • 28444483937 scopus 로고    scopus 로고
    • Origins go plastic
    • Gilbert DM: Origins go plastic. Mol Cell 2005, 20:657-8.
    • (2005) Mol Cell , vol.20 , pp. 657-658
    • Gilbert, D.M.1
  • 112
    • 79957808242 scopus 로고    scopus 로고
    • Open sesame: Activating dormant replication origins in the mouse immunoglobulin heavy chain (Igh) locus
    • Borowiec JA, Schildkraut CL: Open sesame: activating dormant replication origins in the mouse immunoglobulin heavy chain (Igh) locus. Curr Opin Cell Biol 2011, 23:284-92.
    • (2011) Curr Opin Cell Biol , vol.23 , pp. 284-292
    • Borowiec, J.A.1    Schildkraut, C.L.2
  • 113
    • 0027213553 scopus 로고
    • Eukaryotic DNA replication: Anatomy of an origin
    • DePamphilis ML: Eukaryotic DNA replication: anatomy of an origin. Annu Rev Biochem 1993, 62:29-63.
    • (1993) Annu Rev Biochem , vol.62 , pp. 29-63
    • DePamphilis, M.L.1
  • 114
    • 0027731437 scopus 로고
    • Initiation at closely spaced replication origins in a yeast chromosome
    • Brewer BJ, Fangman WL: Initiation at closely spaced replication origins in a yeast chromosome. Science 1993, 262:1728-31.
    • (1993) Science , vol.262 , pp. 1728-1731
    • Brewer, B.J.1    Fangman, W.L.2
  • 115
    • 0028346546 scopus 로고
    • Initiation preference at a yeast origin of replication
    • Brewer BJ, Fangman WL: Initiation preference at a yeast origin of replication. Proc Natl Acad Sci USA 1994, 91:3418-22.
    • (1994) Proc Natl Acad Sci USA , vol.91 , pp. 3418-3422
    • Brewer, B.J.1    Fangman, W.L.2
  • 116
    • 0028365292 scopus 로고
    • Replicator dominance in a eukaryotic chromosome
    • Marahrens Y, Stillman B: Replicator dominance in a eukaryotic chromosome. EMBO J 1994, 13:3395-400.
    • (1994) EMBO J , vol.13 , pp. 3395-3400
    • Marahrens, Y.1    Stillman, B.2
  • 117
    • 0033568196 scopus 로고    scopus 로고
    • Activation of dormant origins of DNA replication in budding yeast
    • Santocanale C, Sharma K, Diffley JF: Activation of dormant origins of DNA replication in budding yeast. Genes Dev 1999, 13:2360-4.
    • (1999) Genes Dev , vol.13 , pp. 2360-2364
    • Santocanale, C.1    Sharma, K.2    Diffley, J.F.3
  • 118
    • 0032784059 scopus 로고    scopus 로고
    • Activation of silent replication origins at autonomously replicating sequence elements near the HML locus in budding yeast
    • Vujcic M, Miller CA, Kowalski D: Activation of silent replication origins at autonomously replicating sequence elements near the HML locus in budding yeast. Mol Cell Biol 1999, 19:6098-109.
    • (1999) Mol Cell Biol , vol.19 , pp. 6098-6109
    • Vujcic, M.1    Miller, C.A.2    Kowalski, D.3
  • 119
    • 0025340970 scopus 로고
    • Replication initiates in a broad zone in the amplified CHO dihydrofolate reductase domain
    • Vaughn JP, Dijkwel PA, Hamlin JL: Replication initiates in a broad zone in the amplified CHO dihydrofolate reductase domain. Cell 1990, 61:1075-87.
    • (1990) Cell , vol.61 , pp. 1075-1087
    • Vaughn, J.P.1    Dijkwel, P.A.2    Hamlin, J.L.3
  • 120
    • 0029007149 scopus 로고
    • The Chinese hamster dihydrofolate reductase origin consists of multiple potential nascent strand start sites
    • Dijkwel PA, Hamlin JL: The Chinese hamster dihydrofolate reductase origin consists of multiple potential nascent strand start sites. Mol Cell Biol 1995, 15:3023-31.
    • (1995) Mol Cell Biol , vol.15 , pp. 3023-3031
    • Dijkwel, P.A.1    Hamlin, J.L.2
  • 121
    • 0036232401 scopus 로고    scopus 로고
    • Initiation sites are distributed at frequent intervals in the Chinese hamster dihydrofolate reductase origin of replication but are used with very different efficiencies
    • Dijkwel PA, Wang S, Hamlin JL: Initiation sites are distributed at frequent intervals in the Chinese hamster dihydrofolate reductase origin of replication but are used with very different efficiencies. Mol Cell Biol 2002, 22:3053-65.
    • (2002) Mol Cell Biol , vol.22 , pp. 3053-3065
    • Dijkwel, P.A.1    Wang, S.2    Hamlin, J.L.3
  • 122
    • 0032245260 scopus 로고    scopus 로고
    • Distal sequences, but not ori-beta/OBR-1, are essential for initiation of DNA replication in the Chinese hamster DHFR origin
    • Kalejta RF, Li X, Mesner LD, Dijkwel PA, Lin HB, Hamlin JL: Distal sequences, but not ori-beta/OBR-1, are essential for initiation of DNA replication in the Chinese hamster DHFR origin. Mol Cell 1998, 2:797-806.
    • (1998) Mol Cell , vol.2 , pp. 797-806
    • Kalejta, R.F.1    Li, X.2    Mesner, L.D.3    Dijkwel, P.A.4    Lin, H.B.5    Hamlin, J.L.6
  • 123
    • 0037305924 scopus 로고    scopus 로고
    • The dihydrofolate reductase origin of replication does not contain any nonredundant genetic elements required for origin activity
    • Mesner LD, Li X, Dijkwel PA, Hamlin JL: The dihydrofolate reductase origin of replication does not contain any nonredundant genetic elements required for origin activity. Mol Cell Biol 2003, 23:804-14.
    • (2003) Mol Cell Biol , vol.23 , pp. 804-814
    • Mesner, L.D.1    Li, X.2    Dijkwel, P.A.3    Hamlin, J.L.4
  • 125
    • 12144287048 scopus 로고    scopus 로고
    • Paixão S, Colaluca IN, Cubells M, Peverali FA, Destro A, Giadrossi S, Giacca M, Falaschi A, Riva S, Biamonti G: Modular structure of the human lamin B2 replicator
    • Paixão S, Colaluca IN, Cubells M, Peverali FA, Destro A, Giadrossi S, Giacca M, Falaschi A, Riva S, Biamonti G: Modular structure of the human lamin B2 replicator. Mol Cell Biol 2004, 24:2958-67.
    • (2004) Mol Cell Biol , vol.24 , pp. 2958-2967
  • 126
    • 1842557591 scopus 로고    scopus 로고
    • The human beta-globin replication initiation region consists of two modular independent replicators
    • Wang L, Lin C, Brooks S, Cimbora D, Groudine M, Aladjem MI: The human beta-globin replication initiation region consists of two modular independent replicators. Mol Cell Biol 2004, 24:3373-86.
    • (2004) Mol Cell Biol , vol.24 , pp. 3373-3386
    • Wang, L.1    Lin, C.2    Brooks, S.3    Cimbora, D.4    Groudine, M.5    Aladjem, M.I.6
  • 127
    • 0036893611 scopus 로고    scopus 로고
    • Developmental changes in the Sciara II/9A initiation zone for DNA replication
    • Lunyak VV, Ezrokhi M, Smith HS, Gerbi SA: Developmental changes in the Sciara II/9A initiation zone for DNA replication. Mol Cell Biol 2002, 22:8426-37.
    • (2002) Mol Cell Biol , vol.22 , pp. 8426-8437
    • Lunyak, V.V.1    Ezrokhi, M.2    Smith, H.S.3    Gerbi, S.A.4
  • 128
    • 0032906460 scopus 로고    scopus 로고
    • Specification of regions of DNA replication initiation during embryogenesis in the 65-kilobase DNApolalpha-dE2F locus of Drosophila melanogaster
    • Sasaki T, Sawado T, Yamaguchi M, Shinomiya T: Specification of regions of DNA replication initiation during embryogenesis in the 65-kilobase DNApolalpha-dE2F locus of Drosophila melanogaster. Mol Cell Biol 1999, 19:547-55.
    • (1999) Mol Cell Biol , vol.19 , pp. 547-555
    • Sasaki, T.1    Sawado, T.2    Yamaguchi, M.3    Shinomiya, T.4
  • 129
    • 1542373676 scopus 로고    scopus 로고
    • The promoter of the Chinese hamster ovary dihydrofolate reductase gene regulates the activity of the local origin and helps define its boundaries
    • Saha S, Shan Y, Mesner LD, Hamlin JL: The promoter of the Chinese hamster ovary dihydrofolate reductase gene regulates the activity of the local origin and helps define its boundaries. Genes Dev 2004, 18:397-410.
    • (2004) Genes Dev , vol.18 , pp. 397-410
    • Saha, S.1    Shan, Y.2    Mesner, L.D.3    Hamlin, J.L.4
  • 130
    • 77954814325 scopus 로고    scopus 로고
    • Interplay between DNA replication and gene expression: A harmonious coexistence
    • Maric C, Prioleau M: Interplay between DNA replication and gene expression: a harmonious coexistence. Curr Opin Cell Biol 2010, 22:277-83.
    • (2010) Curr Opin Cell Biol , vol.22 , pp. 277-283
    • Maric, C.1    Prioleau, M.2
  • 131
    • 10644297436 scopus 로고    scopus 로고
    • Coordination of replication and transcription along a Drosophila chromosome
    • MacAlpine DM, Rodríguez HK, Bell SP: Coordination of replication and transcription along a Drosophila chromosome. Genes Dev 2004, 18:3094-105.
    • (2004) Genes Dev , vol.18 , pp. 3094-3105
    • MacAlpine, D.M.1    Rodríguez, H.K.2    Bell, S.P.3
  • 132
    • 33646576502 scopus 로고    scopus 로고
    • Mapping of DNA replication origins to noncoding genes of the X-inactivation center
    • Rowntree RK, Lee JT: Mapping of DNA replication origins to noncoding genes of the X-inactivation center. Mol Cell Biol 2006, 26:3707-17.
    • (2006) Mol Cell Biol , vol.26 , pp. 3707-3717
    • Rowntree, R.K.1    Lee, J.T.2
  • 133
    • 2342468603 scopus 로고    scopus 로고
    • Heterochromatin on the inactive X chromosome delays replication timing without affecting origin usage
    • Gómez M, Brockdorff N: Heterochromatin on the inactive X chromosome delays replication timing without affecting origin usage. Proc Natl Acad Sci USA 2004, 101:6923-8.
    • (2004) Proc Natl Acad Sci USA , vol.101 , pp. 6923-6928
    • Gómez, M.1    Brockdorff, N.2
  • 134
    • 84891696268 scopus 로고    scopus 로고
    • Random replication of the inactive X chromosome
    • Koren A, McCarroll SA: Random replication of the inactive X chromosome. Genome Res 2014, 24:64-9.
    • (2014) Genome Res , vol.24 , pp. 64-69
    • Koren, A.1    McCarroll, S.A.2
  • 137
    • 79955642432 scopus 로고    scopus 로고
    • Prereplication complex proteins assemble at regions of low nucleosome occupancy within the Chinese hamster dihydrofolate reductase initiation zone
    • Le Beau, Michelle M, Carignon S, Debatisse M, Prinz JA, Dennis JH, Gilbert DM
    • Lubelsky Y, Sasaki T, Kuipers MA, Lucas I, Le Beau, Michelle M, Carignon S, Debatisse M, Prinz JA, Dennis JH, Gilbert DM: Prereplication complex proteins assemble at regions of low nucleosome occupancy within the Chinese hamster dihydrofolate reductase initiation zone. Nucleic Acids Res 2011, 39:3141-55.
    • (2011) Nucleic Acids Res , vol.39 , pp. 3141-3155
    • Lubelsky, Y.1    Sasaki, T.2    Kuipers, M.A.3    Lucas, I.4
  • 138
    • 3142768347 scopus 로고    scopus 로고
    • Chromatin regulates origin activity in Drosophila follicle cells
    • Aggarwal BD, Calvi BR: Chromatin regulates origin activity in Drosophila follicle cells. Nature 2004, 430:372-6.
    • (2004) Nature , vol.430 , pp. 372-376
    • Aggarwal, B.D.1    Calvi, B.R.2
  • 139
    • 84855373452 scopus 로고    scopus 로고
    • Analysis of model replication origins in Drosophila reveals new aspects of the chromatin landscape and its relationship to origin activity and the prereplicative complex
    • Liu J, McConnell K, Dixon M, Calvi BR: Analysis of model replication origins in Drosophila reveals new aspects of the chromatin landscape and its relationship to origin activity and the prereplicative complex. Mol Biol Cell 2012, 23:200-12.
    • (2012) Mol Biol Cell , vol.23 , pp. 200-212
    • Liu, J.1    McConnell, K.2    Dixon, M.3    Calvi, B.R.4
  • 140
    • 0033551686 scopus 로고    scopus 로고
    • Histone acetyltransferase HBO1 interacts with the ORC1 subunit of the human initiator protein
    • Iizuka M, Stillman B: Histone acetyltransferase HBO1 interacts with the ORC1 subunit of the human initiator protein. J Biol Chem 1999, 274:23027-34.
    • (1999) J Biol Chem , vol.274 , pp. 23027-23034
    • Iizuka, M.1    Stillman, B.2
  • 141
    • 0035805606 scopus 로고    scopus 로고
    • Replication factors MCM2 and ORC1 interact with the histone acetyltransferase HBO1
    • Burke TW, Cook JG, Asano M, Nevins JR: Replication factors MCM2 and ORC1 interact with the histone acetyltransferase HBO1. J Biol Chem 2001, 276:15397-408.
    • (2001) J Biol Chem , vol.276 , pp. 15397-15408
    • Burke, T.W.1    Cook, J.G.2    Asano, M.3    Nevins, J.R.4
  • 142
    • 33947177072 scopus 로고    scopus 로고
    • Developmentally regulated histone modifications in Drosophila follicle cells: Initiation of gene amplification is associated with histone H3and H4 hyperacetylation and H1 phosphorylation
    • Hartl T, Boswell C, Orr-Weaver TL, Bosco G: Developmentally regulated histone modifications in Drosophila follicle cells: initiation of gene amplification is associated with histone H3 and H4 hyperacetylation and H1 phosphorylation. Chromosoma 2007, 116:197-214.
    • (2007) Chromosoma , vol.116 , pp. 197-214
    • Hartl, T.1    Boswell, C.2    Orr-Weaver, T.L.3    Bosco, G.4
  • 143
    • 79959936930 scopus 로고    scopus 로고
    • Integrative analysis of gene amplification in Drosophila follicle cells: Parameters of origin activation and repression
    • Kim JC, Nordman J, Xie F, Kashevsky H, Eng T, Li S, MacAlpine DM, Orr-Weaver TL: Integrative analysis of gene amplification in Drosophila follicle cells: parameters of origin activation and repression. Genes Dev 2011, 25:1384-98.
    • (2011) Genes Dev , vol.25 , pp. 1384-1398
    • Kim, J.C.1    Nordman, J.2    Xie, F.3    Kashevsky, H.4    Eng, T.5    Li, S.6    MacAlpine, D.M.7    Orr-Weaver, T.L.8
  • 144
    • 79957564427 scopus 로고    scopus 로고
    • Nucleosomes in the neighborhood: New roles for chromatin modifications in replication origin control
    • Dorn ES, Cook JG: Nucleosomes in the neighborhood: new roles for chromatin modifications in replication origin control. Epigenetics 2011, 6:552-9.
    • (2011) Epigenetics , vol.6 , pp. 552-559
    • Dorn, E.S.1    Cook, J.G.2
  • 145
    • 84904170685 scopus 로고    scopus 로고
    • Epigenetic landscape for initiation of DNA replication
    • Sherstyuk VV, Shevchenko AI, Zakian SM: Epigenetic landscape for initiation of DNA replication. Chromosoma 2014, 123:183-99.
    • (2014) Chromosoma , vol.123 , pp. 183-199
    • Sherstyuk, V.V.1    Shevchenko, A.I.2    Zakian, S.M.3
  • 147
    • 25444461727 scopus 로고    scopus 로고
    • DNA replication initiates at different sites in early and late S phase within human ribosomal RNA genes
    • Coffman FD, He M, Diaz M, Cohen S: DNA replication initiates at different sites in early and late S phase within human ribosomal RNA genes. Cell Cycle 2005, 4:1223-6.
    • (2005) Cell Cycle , vol.4 , pp. 1223-1226
    • Coffman, F.D.1    He, M.2    Diaz, M.3    Cohen, S.4
  • 148
    • 0038302923 scopus 로고    scopus 로고
    • Replication of the chicken beta-globin locus: Early-firing origins at the 50 HS4 insulator and the rho- and betaA-globin genes show opposite epigenetic modifications
    • Prioleau M, Gendron M, Hyrien O: Replication of the chicken beta-globin locus: early-firing origins at the 50 HS4 insulator and the rho- and betaA-globin genes show opposite epigenetic modifications. Mol Cell Biol 2003, 23:3536-49.
    • (2003) Mol Cell Biol , vol.23 , pp. 3536-3549
    • Prioleau, M.1    Gendron, M.2    Hyrien, O.3
  • 149
    • 0027443434 scopus 로고
    • The structure and function of yeast ARS elements
    • Newlon CS, Theis JF: The structure and function of yeast ARS elements. Curr Opin Genet Dev 1993, 3:752-8.
    • (1993) Curr Opin Genet Dev , vol.3 , pp. 752-758
    • Newlon, C.S.1    Theis, J.F.2
  • 150
    • 0030924440 scopus 로고    scopus 로고
    • The ARS309 chromosomal replicator of Saccharomyces cerevisiae depends on an exceptional ARS consensus sequence
    • Theis JF, Newlon CS: The ARS309 chromosomal replicator of Saccharomyces cerevisiae depends on an exceptional ARS consensus sequence. Proc Natl Acad Sci USA 1997, 94:10786-91.
    • (1997) Proc Natl Acad Sci USA , vol.94 , pp. 10786-10791
    • Theis, J.F.1    Newlon, C.S.2
  • 151
    • 3042717854 scopus 로고    scopus 로고
    • Prediction of Saccharomyces cerevisiae replication origins
    • Breier AM, Chatterji S, Cozzarelli NR: Prediction of Saccharomyces cerevisiae replication origins. Genome Biol 2004, 5:R22.
    • (2004) Genome Biol , vol.5 , pp. R22
    • Breier, A.M.1    Chatterji, S.2    Cozzarelli, N.R.3
  • 152
    • 84861956582 scopus 로고    scopus 로고
    • Structure, replication efficiency and fragility of yeast ARS elements
    • Dhar MK, Sehgal S, Kaul S: Structure, replication efficiency and fragility of yeast ARS elements. Res Microbiol 2012, 163:243-53.
    • (2012) Res Microbiol , vol.163 , pp. 243-253
    • Dhar, M.K.1    Sehgal, S.2    Kaul, S.3
  • 153
    • 0042125189 scopus 로고    scopus 로고
    • Sequence-independent DNA binding and replication initiation by the human origin recognition complex
    • Vashee S, Cvetic C, Lu W, Simancek P, Kelly TJ, Walter JC: Sequence-independent DNA binding and replication initiation by the human origin recognition complex. Genes Dev 2003, 17:1894-908.
    • (2003) Genes Dev , vol.17 , pp. 1894-1908
    • Vashee, S.1    Cvetic, C.2    Lu, W.3    Simancek, P.4    Kelly, T.J.5    Walter, J.C.6
  • 154
    • 1842509904 scopus 로고    scopus 로고
    • DNA topology, not DNA sequence, is a critical determinant for Drosophila ORC-DNA binding
    • Remus D, Beall EL, Botchan MR: DNA topology, not DNA sequence, is a critical determinant for Drosophila ORC-DNA binding. EMBO J 2004, 23:897-907.
    • (2004) EMBO J , vol.23 , pp. 897-907
    • Remus, D.1    Beall, E.L.2    Botchan, M.R.3
  • 155
    • 0842307053 scopus 로고    scopus 로고
    • An episomal mammalian replicon: Sequence-independent binding of the origin recognition complex
    • Schaarschmidt D, Baltin J, Stehle IM, Lipps HJ, Knippers R: An episomal mammalian replicon: sequence-independent binding of the origin recognition complex. EMBO J 2004, 23:191-201.
    • (2004) EMBO J , vol.23 , pp. 191-201
    • Schaarschmidt, D.1    Baltin, J.2    Stehle, I.M.3    Lipps, H.J.4    Knippers, R.5
  • 156
    • 77957168933 scopus 로고    scopus 로고
    • Eukaryotic DNA replication origins: Many choices for appropriate answers
    • Méchali M: Eukaryotic DNA replication origins: many choices for appropriate answers. Nat Rev Mol Cell Biol 2010, 11:728-38.
    • (2010) Nat Rev Mol Cell Biol , vol.11 , pp. 728-738
    • Méchali, M.1
  • 157
    • 84870760092 scopus 로고    scopus 로고
    • DNA replication origins
    • Spring Harb Perspect Biol
    • Leonard AC, Méchali M: DNA replication origins. Cold Spring Harb Perspect Biol 2013, 5:a010116.
    • (2013) Cold , vol.5 , pp. a010116
    • Leonard, A.C.1    Méchali, M.2
  • 161
    • 2642647114 scopus 로고    scopus 로고
    • Initiation of DNA replication at CpG islands in mammalian chromosomes
    • Delgado S, Gómez M, Bird A, Antequera F: Initiation of DNA replication at CpG islands in mammalian chromosomes. EMBO J 1998, 17:2426-35.
    • (1998) EMBO J , vol.17 , pp. 2426-2435
    • Delgado, S.1    Gómez, M.2    Bird, A.3    Antequera, F.4
  • 162
    • 45749132922 scopus 로고    scopus 로고
    • DNA replication in early S phase pauses near newly activated origins
    • Frum RA, Chastain PD, Qu P, Cohen SM, Kaufman DG: DNA replication in early S phase pauses near newly activated origins. Cell Cycle 2008, 7:1440-8.
    • (2008) Cell Cycle , vol.7 , pp. 1440-1448
    • Frum, R.A.1    Chastain, P.D.2    Qu, P.3    Cohen, S.M.4    Kaufman, D.G.5
  • 163
    • 38949184969 scopus 로고    scopus 로고
    • Overreplication of short DNA regions during S phase in human cells
    • Gómez M, Antequera F: Overreplication of short DNA regions during S phase in human cells. Genes Dev 2008, 22:375-85.
    • (2008) Genes Dev , vol.22 , pp. 375-385
    • Gómez, M.1    Antequera, F.2
  • 164
    • 0032516695 scopus 로고    scopus 로고
    • Genetic dissection of a mammalian replicator in the human betaglobin locus
    • Aladjem MI, Rodewald LW, Kolman JL, Wahl GM: Genetic dissection of a mammalian replicator in the human betaglobin locus. Science 1998, 281:1005-9.
    • (1998) Science , vol.281 , pp. 1005-1009
    • Aladjem, M.I.1    Rodewald, L.W.2    Kolman, J.L.3    Wahl, G.M.4
  • 165
    • 0037371705 scopus 로고    scopus 로고
    • Multiple functional elements comprise a Mammalian chromosomal replicator
    • Liu G, Malott M, Leffak M: Multiple functional elements comprise a Mammalian chromosomal replicator. Mol Cell Biol 2003, 23:1832-42.
    • (2003) Mol Cell Biol , vol.23 , pp. 1832-1842
    • Liu, G.1    Malott, M.2    Leffak, M.3
  • 166
    • 2942628210 scopus 로고    scopus 로고
    • Defined sequence modules and an architectural element cooperate to promote initiation at an ectopic mammalian chromosomal replication origin
    • Altman AL, Fanning E: Defined sequence modules and an architectural element cooperate to promote initiation at an ectopic mammalian chromosomal replication origin. Mol Cell Biol 2004, 24:4138-50.
    • (2004) Mol Cell Biol , vol.24 , pp. 4138-4150
    • Altman, A.L.1    Fanning, E.2
  • 168
    • 0035146622 scopus 로고    scopus 로고
    • The Chinese hamster dihydrofolate reductase replication origin beta is active at multiple ectopic chromosomal locations and requires specific DNA sequence elements for activity
    • Altman AL, Fanning E: The Chinese hamster dihydrofolate reductase replication origin beta is active at multiple ectopic chromosomal locations and requires specific DNA sequence elements for activity. Mol Cell Biol 2001, 21:1098-110.
    • (2001) Mol Cell Biol , vol.21 , pp. 1098-1110
    • Altman, A.L.1    Fanning, E.2
  • 169
    • 33845653716 scopus 로고    scopus 로고
    • Discrete functional elements required for initiation activity of the Chinese hamster dihydrofolate reductase origin beta at ectopic chromosomal sites
    • Gray SJ, Liu G, Altman AL, Small LE, Fanning E: Discrete functional elements required for initiation activity of the Chinese hamster dihydrofolate reductase origin beta at ectopic chromosomal sites. Exp Cell Res 2007, 313:109-20.
    • (2007) Exp Cell Res , vol.313 , pp. 109-120
    • Gray, S.J.1    Liu, G.2    Altman, A.L.3    Small, L.E.4    Fanning, E.5
  • 170
    • 0035863225 scopus 로고    scopus 로고
    • Functionally distinct, sequence-specific replicator and origin elements are required for Drosophila chorion gene amplification
    • Lu L, Zhang H, Tower J: Functionally distinct, sequence-specific replicator and origin elements are required for Drosophila chorion gene amplification. Genes Dev 2001, 15:134-46.
    • (2001) Genes Dev , vol.15 , pp. 134-146
    • Lu, L.1    Zhang, H.2    Tower, J.3
  • 171
    • 2542602914 scopus 로고    scopus 로고
    • Sequence requirements for function of the Drosophila chorion gene locus ACE3 replicator and ori-beta origin elements
    • Zhang H, Tower J: Sequence requirements for function of the Drosophila chorion gene locus ACE3 replicator and ori-beta origin elements. Development 2004, 131:2089-99.
    • (2004) Development , vol.131 , pp. 2089-2099
    • Zhang, H.1    Tower, J.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.