메뉴 건너뛰기




Volumn 50, Issue 1, 2013, Pages 123-135

Quantitative, Genome-Wide Analysis of Eukaryotic Replication Initiation and Termination

Author keywords

[No Author keywords available]

Indexed keywords

OKAZAKI FRAGMENT;

EID: 84876073691     PISSN: 10972765     EISSN: 10974164     Source Type: Journal    
DOI: 10.1016/j.molcel.2013.03.004     Document Type: Article
Times cited : (109)

References (40)
  • 1
    • 0024291357 scopus 로고
    • A replication fork barrier at the 3' end of yeast ribosomal RNA genes
    • Brewer B.J., Fangman W.L. A replication fork barrier at the 3' end of yeast ribosomal RNA genes. Cell 1988, 55:637-643.
    • (1988) Cell , vol.55 , pp. 637-643
    • Brewer, B.J.1    Fangman, W.L.2
  • 2
    • 0033546210 scopus 로고    scopus 로고
    • The organization of replication and transcription
    • Cook P.R. The organization of replication and transcription. Science 1999, 284:1790-1795.
    • (1999) Science , vol.284 , pp. 1790-1795
    • Cook, P.R.1
  • 3
    • 36348988518 scopus 로고    scopus 로고
    • DNA combing reveals intrinsic temporal disorder in the replication of yeast chromosome VI
    • Czajkowsky D.M., Liu J., Hamlin J.L., Shao Z. DNA combing reveals intrinsic temporal disorder in the replication of yeast chromosome VI. J. Mol. Biol. 2008, 375:12-19.
    • (2008) J. Mol. Biol. , vol.375 , pp. 12-19
    • Czajkowsky, D.M.1    Liu, J.2    Hamlin, J.L.3    Shao, Z.4
  • 5
    • 0029740114 scopus 로고    scopus 로고
    • DNA replication fork pause sites dependent on transcription
    • Deshpande A.M., Newlon C.S. DNA replication fork pause sites dependent on transcription. Science 1996, 272:1030-1033.
    • (1996) Science , vol.272 , pp. 1030-1033
    • Deshpande, A.M.1    Newlon, C.S.2
  • 6
    • 64249120749 scopus 로고    scopus 로고
    • Replicon dynamics, dormant origin firing, and terminal fork integrity after double-strand break formation
    • Doksani Y., Bermejo R., Fiorani S., Haber J.E., Foiani M. Replicon dynamics, dormant origin firing, and terminal fork integrity after double-strand break formation. Cell 2009, 137:247-258.
    • (2009) Cell , vol.137 , pp. 247-258
    • Doksani, Y.1    Bermejo, R.2    Fiorani, S.3    Haber, J.E.4    Foiani, M.5
  • 8
  • 11
    • 0026571672 scopus 로고
    • A position effect on the time of replication origin activation in yeast
    • Ferguson B.M., Fangman W.L. A position effect on the time of replication origin activation in yeast. Cell 1992, 68:333-339.
    • (1992) Cell , vol.68 , pp. 333-339
    • Ferguson, B.M.1    Fangman, W.L.2
  • 12
    • 0031265756 scopus 로고    scopus 로고
    • Replication profile of Saccharomyces cerevisiae chromosome VI
    • Friedman K.L., Brewer B.J., Fangman W.L. Replication profile of Saccharomyces cerevisiae chromosome VI. Genes Cells 1997, 2:667-678.
    • (1997) Genes Cells , vol.2 , pp. 667-678
    • Friedman, K.L.1    Brewer, B.J.2    Fangman, W.L.3
  • 13
    • 65549146426 scopus 로고    scopus 로고
    • Control of DNA replication by anomalous reaction-diffusion kinetics
    • Gauthier M.G., Bechhoefer J. Control of DNA replication by anomalous reaction-diffusion kinetics. Phys. Rev. Lett. 2009, 102:158104.
    • (2009) Phys. Rev. Lett. , vol.102 , pp. 158104
    • Gauthier, M.G.1    Bechhoefer, J.2
  • 14
    • 0026761603 scopus 로고
    • Replication forks pause at yeast centromeres
    • Greenfeder S.A., Newlon C.S. Replication forks pause at yeast centromeres. Mol. Cell. Biol. 1992, 12:4056-4066.
    • (1992) Mol. Cell. Biol. , vol.12 , pp. 4056-4066
    • Greenfeder, S.A.1    Newlon, C.S.2
  • 16
    • 0025272784 scopus 로고
    • Escherichia coli Tus protein acts to arrest the progression of DNA replication forks in vitro
    • Hill T.M., Marians K.J. Escherichia coli Tus protein acts to arrest the progression of DNA replication forks in vitro. Proc. Natl. Acad. Sci. USA 1990, 87:2481-2485.
    • (1990) Proc. Natl. Acad. Sci. USA , vol.87 , pp. 2481-2485
    • Hill, T.M.1    Marians, K.J.2
  • 17
  • 18
    • 0021166345 scopus 로고
    • Structural requirements for the function of a yeast chromosomal replicator
    • Kearsey S. Structural requirements for the function of a yeast chromosomal replicator. Cell 1984, 37:299-307.
    • (1984) Cell , vol.37 , pp. 299-307
    • Kearsey, S.1
  • 20
    • 0030133624 scopus 로고    scopus 로고
    • A yeast gene product, Fob1 protein, required for both replication fork blocking and recombinational hotspot activities
    • Kobayashi T., Horiuchi T. A yeast gene product, Fob1 protein, required for both replication fork blocking and recombinational hotspot activities. Genes Cells 1996, 1:465-474.
    • (1996) Genes Cells , vol.1 , pp. 465-474
    • Kobayashi, T.1    Horiuchi, T.2
  • 21
    • 0035104474 scopus 로고    scopus 로고
    • Nucleosomes positioned by ORC facilitate the initiation of DNA replication
    • Lipford J.R., Bell S.P. Nucleosomes positioned by ORC facilitate the initiation of DNA replication. Mol. Cell 2001, 7:21-30.
    • (2001) Mol. Cell , vol.7 , pp. 21-30
    • Lipford, J.R.1    Bell, S.P.2
  • 22
    • 82455164158 scopus 로고    scopus 로고
    • Limiting replication initiation factors execute the temporal programme of origin firing in budding yeast
    • Mantiero D., Mackenzie A., Donaldson A., Zegerman P. Limiting replication initiation factors execute the temporal programme of origin firing in budding yeast. EMBO J. 2011, 30:4805-4814.
    • (2011) EMBO J. , vol.30 , pp. 4805-4814
    • Mantiero, D.1    Mackenzie, A.2    Donaldson, A.3    Zegerman, P.4
  • 23
    • 0026508417 scopus 로고
    • A yeast chromosomal origin of DNA replication defined by multiple functional elements
    • Marahrens Y., Stillman B. A yeast chromosomal origin of DNA replication defined by multiple functional elements. Science 1992, 255:817-823.
    • (1992) Science , vol.255 , pp. 817-823
    • Marahrens, Y.1    Stillman, B.2
  • 24
    • 33745251622 scopus 로고    scopus 로고
    • In and out of the replication factory
    • Meister P., Taddei A., Gasser S.M. In and out of the replication factory. Cell 2006, 125:1233-1235.
    • (2006) Cell , vol.125 , pp. 1233-1235
    • Meister, P.1    Taddei, A.2    Gasser, S.M.3
  • 25
    • 21844526854 scopus 로고
    • Folded Empirical Distribution Function Curves-Mountain Plots
    • Monti K.L. Folded Empirical Distribution Function Curves-Mountain Plots. Am. Stat. 1995, 49:342-345.
    • (1995) Am. Stat. , vol.49 , pp. 342-345
    • Monti, K.L.1
  • 27
    • 84863643914 scopus 로고    scopus 로고
    • Functional centromeres determine the activation time of pericentric origins of DNA replication in Saccharomyces cerevisiae
    • Pohl T.J., Brewer B.J., Raghuraman M.K. Functional centromeres determine the activation time of pericentric origins of DNA replication in Saccharomyces cerevisiae. PLoS Genet. 2012, 8:e1002677.
    • (2012) PLoS Genet. , vol.8
    • Pohl, T.J.1    Brewer, B.J.2    Raghuraman, M.K.3
  • 29
    • 0028080885 scopus 로고
    • Functional conservation of multiple elements in yeast chromosomal replicators
    • Rao H., Marahrens Y., Stillman B. Functional conservation of multiple elements in yeast chromosomal replicators. Mol. Cell. Biol. 1994, 14:7643-7651.
    • (1994) Mol. Cell. Biol. , vol.14 , pp. 7643-7651
    • Rao, H.1    Marahrens, Y.2    Stillman, B.3
  • 30
    • 70350751416 scopus 로고    scopus 로고
    • Concerted loading of Mcm2-7 double hexamers around DNA during DNA replication origin licensing
    • Remus D., Beuron F., Tolun G., Griffith J.D., Morris E.P., Diffley J.F. Concerted loading of Mcm2-7 double hexamers around DNA during DNA replication origin licensing. Cell 2009, 139:719-730.
    • (2009) Cell , vol.139 , pp. 719-730
    • Remus, D.1    Beuron, F.2    Tolun, G.3    Griffith, J.D.4    Morris, E.P.5    Diffley, J.F.6
  • 32
    • 33749075373 scopus 로고    scopus 로고
    • Cdc7-Dbf4 phosphorylates MCM proteins via a docking site-mediated mechanism to promote S phase progression
    • Sheu Y.J., Stillman B. Cdc7-Dbf4 phosphorylates MCM proteins via a docking site-mediated mechanism to promote S phase progression. Mol. Cell 2006, 24:101-113.
    • (2006) Mol. Cell , vol.24 , pp. 101-113
    • Sheu, Y.J.1    Stillman, B.2
  • 33
    • 0025067370 scopus 로고
    • Nucleosome positioning can affect the function of a cis-acting DNA element in vivo
    • Simpson R.T. Nucleosome positioning can affect the function of a cis-acting DNA element in vivo. Nature 1990, 343:387-389.
    • (1990) Nature , vol.343 , pp. 387-389
    • Simpson, R.T.1
  • 34
    • 84862776917 scopus 로고    scopus 로고
    • Intrinsic coupling of lagging-strand synthesis to chromatin assembly
    • Smith D.J., Whitehouse I. Intrinsic coupling of lagging-strand synthesis to chromatin assembly. Nature 2012, 483:434-438.
    • (2012) Nature , vol.483 , pp. 434-438
    • Smith, D.J.1    Whitehouse, I.2
  • 35
    • 0036929125 scopus 로고    scopus 로고
    • DNA polymerase clamp shows little turnover at established replication sites but sequential de novo assembly at adjacent origin clusters
    • Sporbert A., Gahl A., Ankerhold R., Leonhardt H., Cardoso M.C. DNA polymerase clamp shows little turnover at established replication sites but sequential de novo assembly at adjacent origin clusters. Mol. Cell 2002, 10:1355-1365.
    • (2002) Mol. Cell , vol.10 , pp. 1355-1365
    • Sporbert, A.1    Gahl, A.2    Ankerhold, R.3    Leonhardt, H.4    Cardoso, M.C.5
  • 36
    • 57749100294 scopus 로고    scopus 로고
    • Flexibility of eukaryotic Okazaki fragment maturation through regulated strand displacement synthesis
    • Stith C.M., Sterling J., Resnick M.A., Gordenin D.A., Burgers P.M. Flexibility of eukaryotic Okazaki fragment maturation through regulated strand displacement synthesis. J. Biol. Chem. 2008, 283:34129-34140.
    • (2008) J. Biol. Chem. , vol.283 , pp. 34129-34140
    • Stith, C.M.1    Sterling, J.2    Resnick, M.A.3    Gordenin, D.A.4    Burgers, P.M.5
  • 37
    • 34547236841 scopus 로고    scopus 로고
    • Genome-wide mapping of ORC and Mcm2p binding sites on tiling arrays and identification of essential ARS consensus sequences in S. cerevisiae
    • Xu W., Aparicio J.G., Aparicio O.M., Tavaré S. Genome-wide mapping of ORC and Mcm2p binding sites on tiling arrays and identification of essential ARS consensus sequences in S. cerevisiae. BMC Genomics 2006, 7:276.
    • (2006) BMC Genomics , vol.7 , pp. 276
    • Xu, W.1    Aparicio, J.G.2    Aparicio, O.M.3    Tavaré, S.4
  • 38
    • 0036668464 scopus 로고    scopus 로고
    • Mapping of early firing origins on a replication profile of budding yeast
    • Yabuki N., Terashima H., Kitada K. Mapping of early firing origins on a replication profile of budding yeast. Genes Cells 2002, 7:781-789.
    • (2002) Genes Cells , vol.7 , pp. 781-789
    • Yabuki, N.1    Terashima, H.2    Kitada, K.3
  • 39
    • 0031261584 scopus 로고    scopus 로고
    • The efficiency and timing of initiation of replication of multiple replicons of Saccharomyces cerevisiae chromosome VI
    • Yamashita M., Hori Y., Shinomiya T., Obuse C., Tsurimoto T., Yoshikawa H., Shirahige K. The efficiency and timing of initiation of replication of multiple replicons of Saccharomyces cerevisiae chromosome VI. Genes Cells 1997, 2:655-665.
    • (1997) Genes Cells , vol.2 , pp. 655-665
    • Yamashita, M.1    Hori, Y.2    Shinomiya, T.3    Obuse, C.4    Tsurimoto, T.5    Yoshikawa, H.6    Shirahige, K.7
  • 40
    • 77956253770 scopus 로고    scopus 로고
    • Modeling genome-wide replication kinetics reveals a mechanism for regulation of replication timing
    • Yang S.C., Rhind N., Bechhoefer J. Modeling genome-wide replication kinetics reveals a mechanism for regulation of replication timing. Mol. Syst. Biol. 2010, 6:404.
    • (2010) Mol. Syst. Biol. , vol.6 , pp. 404
    • Yang, S.C.1    Rhind, N.2    Bechhoefer, J.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.