메뉴 건너뛰기




Volumn 23, Issue 4, 2004, Pages 897-907

DNA topology, not DNA sequence, is a critical determinant for Drosophila ORC-DNA binding

Author keywords

DNA binding; Drosophila ORC; Replication; Topology

Indexed keywords

DNA; DROSOPHILA ORIGIN RECOGNITION COMPLEX; GENE PRODUCT; UNCLASSIFIED DRUG;

EID: 1842509904     PISSN: 02614189     EISSN: None     Source Type: Journal    
DOI: 10.1038/sj.emboj.7600077     Document Type: Article
Times cited : (197)

References (44)
  • 2
    • 0033569403 scopus 로고    scopus 로고
    • Drosophila ORC specifically binds to ACE3, an origin of DNA replication control element
    • Austin RJ, Orr-Weaver TL, Bell SP (1999) Drosophila ORC specifically binds to ACE3, an origin of DNA replication control element. Genes Dev 13: 2639-2649
    • (1999) Genes Dev , vol.13 , pp. 2639-2649
    • Austin, R.J.1    Orr-Weaver, T.L.2    Bell, S.P.3
  • 3
    • 0347457073 scopus 로고    scopus 로고
    • Role for a Drosophila Myb-containing protein complex in site-specific DNA replication
    • Beall EL, Manak JR, Zhou S, Bell M, Lipsick JS, Botchan MR (2002) Role for a Drosophila Myb-containing protein complex in site-specific DNA replication. Nature 420: 833-837
    • (2002) Nature , vol.420 , pp. 833-837
    • Beall, E.L.1    Manak, J.R.2    Zhou, S.3    Bell, M.4    Lipsick, J.S.5    Botchan, M.R.6
  • 4
    • 0037087587 scopus 로고    scopus 로고
    • The origin recognition complex: From simple origins to complex functions
    • Bell SP (2002) The origin recognition complex: from simple origins to complex functions. Genes Dev 16: 659-672
    • (2002) Genes Dev , vol.16 , pp. 659-672
    • Bell, S.P.1
  • 5
    • 0026607331 scopus 로고
    • ATP-dependent recognition of eukaryotic origins of DNA replication by a multiprotein complex
    • Bell SP, Stillman B (1992) ATP-dependent recognition of eukaryotic origins of DNA replication by a multiprotein complex. Nature 357: 128-134
    • (1992) Nature , vol.357 , pp. 128-134
    • Bell, S.P.1    Stillman, B.2
  • 6
    • 0035825156 scopus 로고    scopus 로고
    • Replication origins in Xenopus egg extract Are 5-15 kilobases apart and are activated in clusters that fire at different times
    • Blow JJ, Gillespie PJ, Francis D, Jackson DA (2001) Replication origins in Xenopus egg extract Are 5-15 kilobases apart and are activated in clusters that fire at different times. J Cell Biol 152: 15-25
    • (2001) J Cell Biol , vol.152 , pp. 15-25
    • Blow, J.J.1    Gillespie, P.J.2    Francis, D.3    Jackson, D.A.4
  • 7
    • 0024284091 scopus 로고
    • Duplex opening by dnaA protein at novel sequences in initiation of replication at the origin of the E. coli chromosome
    • Bramhill D, Kornberg A (1988) Duplex opening by dnaA protein at novel sequences in initiation of replication at the origin of the E. coli chromosome. Cell 52: 743-755
    • (1988) Cell , vol.52 , pp. 743-755
    • Bramhill, D.1    Kornberg, A.2
  • 8
    • 0032861509 scopus 로고    scopus 로고
    • Chorion gene amplification in Drosophila: A model for metazoan origins of DNA replication and S-phase control
    • Calvi BR, Spradling AC (1999) Chorion gene amplification in Drosophila: a model for metazoan origins of DNA replication and S-phase control. Methods 18: 407-417
    • (1999) Methods , vol.18 , pp. 407-417
    • Calvi, B.R.1    Spradling, A.C.2
  • 9
    • 0033563102 scopus 로고    scopus 로고
    • Assembly of functionally active Drosophila origin recognition complex from recombinant proteins
    • Chesnokov I, Gossen M, Remus D, Botchan M (1999) Assembly of functionally active Drosophila origin recognition complex from recombinant proteins. Genes Dev 13: 1289-1296
    • (1999) Genes Dev , vol.13 , pp. 1289-1296
    • Chesnokov, I.1    Gossen, M.2    Remus, D.3    Botchan, M.4
  • 10
    • 0035834114 scopus 로고    scopus 로고
    • Functional analysis of mutant and wild-type Drosophila origin recognition complex
    • Chesnokov I, Remus D, Botchan M (2001) Functional analysis of mutant and wild-type Drosophila origin recognition complex. Proc Natl Acad Sci USA 98: 11997-12002
    • (2001) Proc Natl Acad Sci USA , vol.98 , pp. 11997-12002
    • Chesnokov, I.1    Remus, D.2    Botchan, M.3
  • 11
    • 0033055057 scopus 로고    scopus 로고
    • The fission yeast homologue of Orc4p binds to replication origin DNA via multiple AT-hooks
    • Chuang RY, Kelly TJ (1999) The fission yeast homologue of Orc4p binds to replication origin DNA via multiple AT-hooks. Proc Natl Acad Sci USA 96: 2656-2661
    • (1999) Proc Natl Acad Sci USA , vol.96 , pp. 2656-2661
    • Chuang, R.Y.1    Kelly, T.J.2
  • 12
    • 0029585836 scopus 로고
    • Genetic analysis of an ARS element from the fission yeast Schizosaccharomyces pombe
    • Clyne RK, Kelly TJ (1995) Genetic analysis of an ARS element from the fission yeast Schizosaccharomyces pombe. EMBO J 14: 6348-6357
    • (1995) EMBO J , vol.14 , pp. 6348-6357
    • Clyne, R.K.1    Kelly, T.J.2
  • 14
    • 0033043743 scopus 로고    scopus 로고
    • Replication origins in metazoan chromosomes: Fact or fiction?
    • DePamphilis ML (1999) Replication origins in metazoan chromosomes: fact or fiction? BioEssays 21: 5-16
    • (1999) BioEssays , vol.21 , pp. 5-16
    • DePamphilis, M.L.1
  • 15
    • 0041589543 scopus 로고    scopus 로고
    • Eukaryotic DNA replication origins: Reconciling disparate data
    • DePamphilis ML (2003) Eukaryotic DNA replication origins: reconciling disparate data. Cell 114: 274-275
    • (2003) Cell , vol.114 , pp. 274-275
    • DePamphilis, M.L.1
  • 16
    • 0026550902 scopus 로고
    • Protein-DNA interactions at a yeast replication origin
    • Diffley JF, Cocker JH (1992) Protein-DNA interactions at a yeast replication origin. Nature 357: 169-172
    • (1992) Nature , vol.357 , pp. 169-172
    • Diffley, J.F.1    Cocker, J.H.2
  • 17
    • 0037119995 scopus 로고    scopus 로고
    • The structure of bacterial DnaA: Implications for general mechanisms underlying DNA replication initiation
    • Erzberger JP, Pirruccello MM, Berger JM (2002) The structure of bacterial DnaA: implications for general mechanisms underlying DNA replication initiation. EMBO J 21: 4763-4773
    • (2002) EMBO J , vol.21 , pp. 4763-4773
    • Erzberger, J.P.1    Pirruccello, M.M.2    Berger, J.M.3
  • 18
    • 0020842897 scopus 로고
    • Purified dnaA protein in initiation of replication at the Escherichia coli chromosomal origin of replication
    • Fuller RS, Kornberg A (1983) Purified dnaA protein in initiation of replication at the Escherichia coli chromosomal origin of replication. Proc Natl Acad Sci USA 80: 5817-5821
    • (1983) Proc Natl Acad Sci USA , vol.80 , pp. 5817-5821
    • Fuller, R.S.1    Kornberg, A.2
  • 19
    • 0035812742 scopus 로고    scopus 로고
    • Making sense of eukaryotic DNA replication origins
    • Gilbert DM (2001) Making sense of eukaryotic DNA replication origins. Science 294: 96-100
    • (2001) Science , vol.294 , pp. 96-100
    • Gilbert, D.M.1
  • 20
    • 0018952783 scopus 로고
    • Regulated replication of DNA microinjected into eggs of Xenopus laevis
    • Harland RM, Laskey RA (1980) Regulated replication of DNA microinjected into eggs of Xenopus laevis. Cell 21: 761-771
    • (1980) Cell , vol.21 , pp. 761-771
    • Harland, R.M.1    Laskey, R.A.2
  • 21
    • 0037319618 scopus 로고    scopus 로고
    • Paradoxes of eukaryotic DNA replication: MCM proteins and the random completion problem
    • Hyrien O, Marheineke K, Goldar A (2003) Paradoxes of eukaryotic DNA replication: MCM proteins and the random completion problem. BioEssays 25: 116-125
    • (2003) BioEssays , vol.25 , pp. 116-125
    • Hyrien, O.1    Marheineke, K.2    Goldar, A.3
  • 22
    • 0028829358 scopus 로고
    • Transition in specification of embryonic metazoan DNA replication origins
    • Hyrien O, Maric C, Mechali M (1995) Transition in specification of embryonic metazoan DNA replication origins. Science 270: 994-997
    • (1995) Science , vol.270 , pp. 994-997
    • Hyrien, O.1    Maric, C.2    Mechali, M.3
  • 24
    • 0022646708 scopus 로고
    • On the mechanism of pairing of single- and double-stranded DNA molecules by the recA and single-stranded DNA-binding proteins of Escherichia coli
    • Julin DA, Riddles PW, Lehman IR (1986) On the mechanism of pairing of single- and double-stranded DNA molecules by the recA and single-stranded DNA-binding proteins of Escherichia coli. J Biol Chem 261: 1025-1030
    • (1986) J Biol Chem , vol.261 , pp. 1025-1030
    • Julin, D.A.1    Riddles, P.W.2    Lehman, I.R.3
  • 25
    • 0037199945 scopus 로고    scopus 로고
    • The origin recognition complex marks a replication origin in the human TOP1 gene promoter
    • Keller C, Ladenburger EM, Kremer M, Knippers R (2002) The origin recognition complex marks a replication origin in the human TOP1 gene promoter. J Biol Chem 277: 31430-31440
    • (2002) J Biol Chem , vol.277 , pp. 31430-31440
    • Keller, C.1    Ladenburger, E.M.2    Kremer, M.3    Knippers, R.4
  • 26
    • 0001074488 scopus 로고
    • Determination of the number of superhelical turns in simian virus 40 DNA by gel electrophoresis
    • Keller W (1975) Determination of the number of superhelical turns in simian virus 40 DNA by gel electrophoresis. Proc Natl Acad Sci USA 72: 4876-4880
    • (1975) Proc Natl Acad Sci USA , vol.72 , pp. 4876-4880
    • Keller, W.1
  • 27
    • 0035158487 scopus 로고    scopus 로고
    • Site-specific DNA binding of the Schizosaccharomyces pombe origin recognition complex is determined by the Orc4 subunit
    • Kong D, DePamphilis ML (2001) Site-specific DNA binding of the Schizosaccharomyces pombe origin recognition complex is determined by the Orc4 subunit. Mol Cell Biol 21: 8095-8103
    • (2001) Mol Cell Biol , vol.21 , pp. 8095-8103
    • Kong, D.1    DePamphilis, M.L.2
  • 28
    • 0030861728 scopus 로고    scopus 로고
    • Large scale preparation of positively supercoiled DNA using the archaeal histone HMf
    • LaMarr WA, Sandman KM, Reeve JN, Dedon PC (1997) Large scale preparation of positively supercoiled DNA using the archaeal histone HMf. Nucleic Acids Res 25: 1660-1661
    • (1997) Nucleic Acids Res , vol.25 , pp. 1660-1661
    • LaMarr, W.A.1    Sandman, K.M.2    Reeve, J.N.3    Dedon, P.C.4
  • 29
    • 0034282727 scopus 로고    scopus 로고
    • Regulation of origin recognition complex conformation and ATPase activity: Differential effects of single-stranded and double-stranded DNA binding
    • Lee DG, Makhov AM, Klemm RD, Griffith JD, Bell SP (2000) Regulation of origin recognition complex conformation and ATPase activity: differential effects of single-stranded and double-stranded DNA binding. EMBO J 19: 4774-4782
    • (2000) EMBO J , vol.19 , pp. 4774-4782
    • Lee, D.G.1    Makhov, A.M.2    Klemm, R.D.3    Griffith, J.D.4    Bell, S.P.5
  • 30
    • 0035923508 scopus 로고    scopus 로고
    • The Schizosaccharomyces pombe origin recognition complex interacts with multiple AT-rich regions of the replication origin DNA by means of the AT-hook domains of the spOrc4 protein
    • Lee JK, Moon KY, Jiang Y, Hurwitz J (2001) The Schizosaccharomyces pombe origin recognition complex interacts with multiple AT-rich regions of the replication origin DNA by means of the AT-hook domains of the spOrc4 protein. Proc Natl Acad Sci USA 98: 13589-13594
    • (2001) Proc Natl Acad Sci USA , vol.98 , pp. 13589-13594
    • Lee, J.K.1    Moon, K.Y.2    Jiang, Y.3    Hurwitz, J.4
  • 31
    • 0026508417 scopus 로고
    • A yeast chromosomal origin of DNA replication defined by multiple functional elements
    • Marahrens Y, Stillman B (1992) A yeast chromosomal origin of DNA replication defined by multiple functional elements. Science 255: 817-823
    • (1992) Science , vol.255 , pp. 817-823
    • Marahrens, Y.1    Stillman, B.2
  • 32
    • 0021714731 scopus 로고
    • Lack of specific sequence requirement for DNA replication in Xenopus eggs compared with high sequence specificity in yeast
    • Mechali M, Kearsey S (1984) Lack of specific sequence requirement for DNA replication in Xenopus eggs compared with high sequence specificity in yeast. Cell 38: 55-64
    • (1984) Cell , vol.38 , pp. 55-64
    • Mechali, M.1    Kearsey, S.2
  • 33
    • 0034234223 scopus 로고    scopus 로고
    • Cdc6p modulates the structure and DNA binding activity of the origin recognition complex in vitro
    • Mizushima T, Takahashi N, Stillman B (2000) Cdc6p modulates the structure and DNA binding activity of the origin recognition complex in vitro. Genes Dev 14: 1631-1641
    • (2000) Genes Dev , vol.14 , pp. 1631-1641
    • Mizushima, T.1    Takahashi, N.2    Stillman, B.3
  • 34
    • 0033607154 scopus 로고    scopus 로고
    • Identification and reconstitution of the origin recognition complex from Schizosaccharomyces pombe
    • Moon KY, Kong D, Lee JK, Raychaudhuri S, Hurwitz J (1999) Identification and reconstitution of the origin recognition complex from Schizosaccharomyces pombe. Proc Natl Acad Sci USA 96: 12367-12372
    • (1999) Proc Natl Acad Sci USA , vol.96 , pp. 12367-12372
    • Moon, K.Y.1    Kong, D.2    Lee, J.K.3    Raychaudhuri, S.4    Hurwitz, J.5
  • 35
    • 0035422288 scopus 로고    scopus 로고
    • Stability, chromatin association and functional activity of mammalian pre-replication complex proteins during the cell cycle
    • Okuno Y, McNairn AJ, den Elzen N, Pines J, Gilbert DM (2001) Stability, chromatin association and functional activity of mammalian pre-replication complex proteins during the cell cycle. EMBO J 20: 4263-4277
    • (2001) EMBO J , vol.20 , pp. 4263-4277
    • Okuno, Y.1    McNairn, A.J.2    Den Elzen, N.3    Pines, J.4    Gilbert, D.M.5
  • 36
    • 0025369195 scopus 로고
    • Effect of transcription of yeast chromatin on DNA topology in vivo
    • Pederson DS, Morse RH (1990) Effect of transcription of yeast chromatin on DNA topology in vivo. EMBO J 9: 1873-1881
    • (1990) EMBO J , vol.9 , pp. 1873-1881
    • Pederson, D.S.1    Morse, R.H.2
  • 37
    • 0015307751 scopus 로고
    • Lac repressor binding to synthetic DNAs of defined nucleotide sequence
    • Riggs AD, Lin S, Wells RD (1972) Lac repressor binding to synthetic DNAs of defined nucleotide sequence. Proc Natl Acad Sci USA 69: 761-764
    • (1972) Proc Natl Acad Sci USA , vol.69 , pp. 761-764
    • Riggs, A.D.1    Lin, S.2    Wells, R.D.3
  • 38
    • 0023046695 scopus 로고
    • Both DNA topoisomerases I and II relax 2 micron plasmid DNA in living yeast cells
    • Saavedra RA, Huberman JA (1986) Both DNA topoisomerases I and II relax 2 micron plasmid DNA in living yeast cells. Cell 45: 65-70
    • (1986) Cell , vol.45 , pp. 65-70
    • Saavedra, R.A.1    Huberman, J.A.2
  • 39
    • 0032906460 scopus 로고    scopus 로고
    • Specification of regions of DNA replication initiation during embryogenesis in the 65-kilobase DNApolalpha-dE2F locus of Drosophila melanogaster
    • Sasaki T, Sawado T, Yamaguchi M, Shinomiya T (1999) Specification of regions of DNA replication initiation during embryogenesis in the 65-kilobase DNApolalpha-dE2F locus of Drosophila melanogaster. Mol Cell Biol 19: 547-555
    • (1999) Mol Cell Biol , vol.19 , pp. 547-555
    • Sasaki, T.1    Sawado, T.2    Yamaguchi, M.3    Shinomiya, T.4
  • 40
    • 0023837775 scopus 로고
    • Initiation protein induced helix destabilization at the lambda origin: A prepriming step in DNA replication
    • Schnos M, Zahn K, Inman RB, Blattner FR (1988) Initiation protein induced helix destabilization at the lambda origin: a prepriming step in DNA replication. Cell 52: 385-395
    • (1988) Cell , vol.52 , pp. 385-395
    • Schnos, M.1    Zahn, K.2    Inman, R.B.3    Blattner, F.R.4
  • 41
    • 0029050476 scopus 로고
    • Autonomous replication in Drosophila melanogaster tissue culture cells
    • Smith JG, Calos MP (1995) Autonomous replication in Drosophila melanogaster tissue culture cells. Chromosoma 103: 597-605
    • (1995) Chromosoma , vol.103 , pp. 597-605
    • Smith, J.G.1    Calos, M.P.2
  • 42
    • 0023492894 scopus 로고
    • Regulation of DNA replication during Drosophila development
    • Spradling A, Orr-Weaver T (1987) Regulation of DNA replication during Drosophila development. Annu Rev Genet 21: 373-403
    • (1987) Annu Rev Genet , vol.21 , pp. 373-403
    • Spradling, A.1    Orr-Weaver, T.2
  • 43
    • 0042125189 scopus 로고    scopus 로고
    • Sequence-independent DNA binding and replication initiation by the human origin recognition complex
    • Vashee S, Cvetic C, Lu W, Simancek P, Kelly TJ, Walter JC (2003) Sequence-independent DNA binding and replication initiation by the human origin recognition complex. Genes Dev 17: 1894-1908
    • (2003) Genes Dev , vol.17 , pp. 1894-1908
    • Vashee, S.1    Cvetic, C.2    Lu, W.3    Simancek, P.4    Kelly, T.J.5    Walter, J.C.6
  • 44
    • 0031037467 scopus 로고    scopus 로고
    • Regulation of replicon size in Xenopus egg extracts
    • Walter J, Newport JW (1997) Regulation of replicon size in Xenopus egg extracts. Science 275: 993-995
    • (1997) Science , vol.275 , pp. 993-995
    • Walter, J.1    Newport, J.W.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.