-
1
-
-
84875498895
-
The immune response in tuberculosis
-
O'Garra A., Redford P.S., McNab F.W., Bloom C.I., Wilkinson R.J., Berry M.P.R. The immune response in tuberculosis. Annu Rev Immunol 2013, 31:475-527.
-
(2013)
Annu Rev Immunol
, vol.31
, pp. 475-527
-
-
O'Garra, A.1
Redford, P.S.2
McNab, F.W.3
Bloom, C.I.4
Wilkinson, R.J.5
Berry, M.P.R.6
-
2
-
-
70350478800
-
The past and future of tuberculosis research
-
Comas I., Gagneux S. The past and future of tuberculosis research. PLoS Pathog 2009, 5.
-
(2009)
PLoS Pathog
, vol.5
-
-
Comas, I.1
Gagneux, S.2
-
3
-
-
0036219062
-
Genetic dissection of immunity to mycobacteria: the human model
-
Casanova J.L., Abel L. Genetic dissection of immunity to mycobacteria: the human model. Annu Rev Immunol 2002, 20:581-620.
-
(2002)
Annu Rev Immunol
, vol.20
, pp. 581-620
-
-
Casanova, J.L.1
Abel, L.2
-
4
-
-
0036816441
-
The association of housing density, isolation and tuberculosis in Canadian First Nations communities
-
Clark M., Riben P., Nowgesic E. The association of housing density, isolation and tuberculosis in Canadian First Nations communities. Int J Epidemiol 2002, 31:940-945.
-
(2002)
Int J Epidemiol
, vol.31
, pp. 940-945
-
-
Clark, M.1
Riben, P.2
Nowgesic, E.3
-
5
-
-
84879490984
-
Natural ventilation reduces high TB transmission risk in traditional homes in rural KwaZulu-Natal, South Africa
-
Lygizos M., Shenoi S., Brooks R., Bhushan A., Brust J., Zelterman D., et al. Natural ventilation reduces high TB transmission risk in traditional homes in rural KwaZulu-Natal, South Africa. BMC Infect Dis 2013, 13:300.
-
(2013)
BMC Infect Dis
, vol.13
, pp. 300
-
-
Lygizos, M.1
Shenoi, S.2
Brooks, R.3
Bhushan, A.4
Brust, J.5
Zelterman, D.6
-
6
-
-
80053265890
-
A role for systems epidemiology in tuberculosis research
-
Comas I., Gagneux S. A role for systems epidemiology in tuberculosis research. Trends Microbiol 2011, 19:492-500.
-
(2011)
Trends Microbiol
, vol.19
, pp. 492-500
-
-
Comas, I.1
Gagneux, S.2
-
7
-
-
78049317944
-
Does M. tuberculosis genomic diversity explain disease diversity?
-
Coscollá M., Gagneux S. Does M. tuberculosis genomic diversity explain disease diversity?. Drug Discov Today: Dis Mech 2010, 7:e43-e59.
-
(2010)
Drug Discov Today: Dis Mech
, vol.7
, pp. e43-e59
-
-
Coscollá, M.1
Gagneux, S.2
-
8
-
-
74549118978
-
Possible underlying mechanisms for successful emergence of the Mycobacterium tuberculosis Beijing genotype strains
-
Parwati I., van Crevel R., van Soolingen D. Possible underlying mechanisms for successful emergence of the Mycobacterium tuberculosis Beijing genotype strains. Lancet Infect Dis 2010, 10:103-111.
-
(2010)
Lancet Infect Dis
, vol.10
, pp. 103-111
-
-
Parwati, I.1
van Crevel, R.2
van Soolingen, D.3
-
9
-
-
84884286461
-
Genetic diversity in Mycobacterium tuberculosis
-
Gagneux S. Genetic diversity in Mycobacterium tuberculosis. Curr Top Microbiol Immunol 2013, 374:1-25.
-
(2013)
Curr Top Microbiol Immunol
, vol.374
, pp. 1-25
-
-
Gagneux, S.1
-
10
-
-
70649084195
-
Genotyping of genetically monomorphic bacteria: DNA sequencing in Mycobacterium tuberculosis highlights the limitations of current methodologies
-
Comas I., Homolka S., Niemann S., Gagneux S. Genotyping of genetically monomorphic bacteria: DNA sequencing in Mycobacterium tuberculosis highlights the limitations of current methodologies. PLoS ONE 2009, 4:e7815.
-
(2009)
PLoS ONE
, vol.4
, pp. e7815
-
-
Comas, I.1
Homolka, S.2
Niemann, S.3
Gagneux, S.4
-
11
-
-
84874531408
-
Single nucleotide polymorphisms in Mycobacterium tuberculosis and the need for a curated database
-
Stucki D., Gagneux S. Single nucleotide polymorphisms in Mycobacterium tuberculosis and the need for a curated database. Tuberculosis 2013, 93:30-39.
-
(2013)
Tuberculosis
, vol.93
, pp. 30-39
-
-
Stucki, D.1
Gagneux, S.2
-
12
-
-
84893421624
-
Current methods in the molecular typing of Mycobacterium tuberculosis and other mycobacteria
-
Jagielski T., van Ingen J., Rastogi N., Dziadek J., Mazur P.K., Bielecki J. Current methods in the molecular typing of Mycobacterium tuberculosis and other mycobacteria. Biomed Res Int 2014.
-
(2014)
Biomed Res Int
-
-
Jagielski, T.1
van Ingen, J.2
Rastogi, N.3
Dziadek, J.4
Mazur, P.K.5
Bielecki, J.6
-
13
-
-
70449568272
-
Comparative genomics reveal the mechanism of the parallel evolution of O157 and non-O157 enterohemorrhagic Escherichia coli
-
Ogura Y., Ooka T., Iguchi A., Toh H., Asadulghani M., Oshima K., et al. Comparative genomics reveal the mechanism of the parallel evolution of O157 and non-O157 enterohemorrhagic Escherichia coli. Proc Natl Acad Sci USA 2009, 106:17939-17944.
-
(2009)
Proc Natl Acad Sci USA
, vol.106
, pp. 17939-17944
-
-
Ogura, Y.1
Ooka, T.2
Iguchi, A.3
Toh, H.4
Asadulghani, M.5
Oshima, K.6
-
14
-
-
84908135412
-
Comprehensive identification of single nucleotide polymorphisms associated with beta-lactam resistance within pneumococcal mosaic genes
-
Chewapreecha C., Marttinen P., Croucher N.J., Salter S.J., Harris S.R., Mather A.E., et al. Comprehensive identification of single nucleotide polymorphisms associated with beta-lactam resistance within pneumococcal mosaic genes. PLoS Genet 2014, 10:e1004547.
-
(2014)
PLoS Genet
, vol.10
, pp. e1004547
-
-
Chewapreecha, C.1
Marttinen, P.2
Croucher, N.J.3
Salter, S.J.4
Harris, S.R.5
Mather, A.E.6
-
15
-
-
0027498478
-
Strain identification of Mycobacterium tuberculosis by DNA fingerprinting: recommendations for a standardized methodology
-
van Embden J.D., Cave M.D., Crawford J.T., Dale J.W., Eisenach K.D., Gicquel B., et al. Strain identification of Mycobacterium tuberculosis by DNA fingerprinting: recommendations for a standardized methodology. J Clin Microbiol 1993, 31:406-409.
-
(1993)
J Clin Microbiol
, vol.31
, pp. 406-409
-
-
van Embden, J.D.1
Cave, M.D.2
Crawford, J.T.3
Dale, J.W.4
Eisenach, K.D.5
Gicquel, B.6
-
16
-
-
0028302048
-
The epidemiology of tuberculosis in San Francisco. A population-based study using conventional and molecular methods
-
Small P.M., Hopewell P.C., Singh S.P., Paz A., Parsonnet J., Ruston D.C., et al. The epidemiology of tuberculosis in San Francisco. A population-based study using conventional and molecular methods. N Engl J Med 1994, 1703-1709.
-
(1994)
N Engl J Med
, pp. 1703-1709
-
-
Small, P.M.1
Hopewell, P.C.2
Singh, S.P.3
Paz, A.4
Parsonnet, J.5
Ruston, D.C.6
-
17
-
-
0028287309
-
Transmission of tuberculosis in New York City. An analysis by DNA fingerprinting and conventional epidemiologic methods
-
Alland D., Kalkut G.E., Moss A.R., McAdam R.A., Hahn J.A., Bosworth W., et al. Transmission of tuberculosis in New York City. An analysis by DNA fingerprinting and conventional epidemiologic methods. N Engl J Med 1994, 1710-1716.
-
(1994)
N Engl J Med
, pp. 1710-1716
-
-
Alland, D.1
Kalkut, G.E.2
Moss, A.R.3
McAdam, R.A.4
Hahn, J.A.5
Bosworth, W.6
-
18
-
-
84859926842
-
SITVITWEB - a publicly available international multimarker database for studying Mycobacterium tuberculosis genetic diversity and molecular epidemiology
-
Demay C., Liens B., Burguiere T., Hill V., Couvin D., Millet J., et al. SITVITWEB - a publicly available international multimarker database for studying Mycobacterium tuberculosis genetic diversity and molecular epidemiology. Infect Genet Evol 2012, 12:755-766.
-
(2012)
Infect Genet Evol
, vol.12
, pp. 755-766
-
-
Demay, C.1
Liens, B.2
Burguiere, T.3
Hill, V.4
Couvin, D.5
Millet, J.6
-
19
-
-
77954285106
-
MIRU-VNTRplus: a web tool for polyphasic genotyping of Mycobacterium tuberculosis complex bacteria
-
Weniger T., Krawczyk J., Supply P., Niemann S., Harmsen D. MIRU-VNTRplus: a web tool for polyphasic genotyping of Mycobacterium tuberculosis complex bacteria. Nucleic Acids Res 2010, 38:W326-W331.
-
(2010)
Nucleic Acids Res
, vol.38
, pp. W326-W331
-
-
Weniger, T.1
Krawczyk, J.2
Supply, P.3
Niemann, S.4
Harmsen, D.5
-
20
-
-
1842788227
-
Stable association between strains of Mycobacterium tuberculosis and their human host populations
-
Hirsh A.E., Tsolaki A.G., DeRiemer K., Feldman M.W., Small P.M. Stable association between strains of Mycobacterium tuberculosis and their human host populations. Proc Natl Acad Sci USA 2004, 101:4871-4876.
-
(2004)
Proc Natl Acad Sci USA
, vol.101
, pp. 4871-4876
-
-
Hirsh, A.E.1
Tsolaki, A.G.2
DeRiemer, K.3
Feldman, M.W.4
Small, P.M.5
-
21
-
-
3843146244
-
Genomic analysis distinguishes Mycobacterium africanum
-
Mostowy S., Onipede A., Gagneux S., Niemann S., Kremer K., Desmond E.P., et al. Genomic analysis distinguishes Mycobacterium africanum. J Clin Microbiol 2004, 42:3594-3599.
-
(2004)
J Clin Microbiol
, vol.42
, pp. 3594-3599
-
-
Mostowy, S.1
Onipede, A.2
Gagneux, S.3
Niemann, S.4
Kremer, K.5
Desmond, E.P.6
-
22
-
-
0345730810
-
Genomic interrogation of the dassie bacillus reveals it as a unique RD1 mutant within the Mycobacterium tuberculosis complex
-
Mostowy S., Cousins D., Behr M.A. Genomic interrogation of the dassie bacillus reveals it as a unique RD1 mutant within the Mycobacterium tuberculosis complex. J Bacteriol 2004, 186:104-109.
-
(2004)
J Bacteriol
, vol.186
, pp. 104-109
-
-
Mostowy, S.1
Cousins, D.2
Behr, M.A.3
-
23
-
-
11144356962
-
Functional and evolutionary genomics of Mycobacterium tuberculosis: insights from genomic deletions in 100 strains
-
Tsolaki A.G., Hirsh A.E., DeRiemer K., Enciso J.A., Wong M.Z., Hannan M., et al. Functional and evolutionary genomics of Mycobacterium tuberculosis: insights from genomic deletions in 100 strains. Proc Natl Acad Sci USA 2004, 101:4865-4870.
-
(2004)
Proc Natl Acad Sci USA
, vol.101
, pp. 4865-4870
-
-
Tsolaki, A.G.1
Hirsh, A.E.2
DeRiemer, K.3
Enciso, J.A.4
Wong, M.Z.5
Hannan, M.6
-
24
-
-
33644531249
-
Variable host-pathogen compatibility in Mycobacterium tuberculosis
-
Gagneux S., DeRiemer K., Van T., Kato-Maeda M., de Jong B.C., Narayanan S., et al. Variable host-pathogen compatibility in Mycobacterium tuberculosis. Proc Natl Acad Sci USA 2006, 103:2869-2873.
-
(2006)
Proc Natl Acad Sci USA
, vol.103
, pp. 2869-2873
-
-
Gagneux, S.1
DeRiemer, K.2
Van, T.3
Kato-Maeda, M.4
de Jong, B.C.5
Narayanan, S.6
-
25
-
-
22144461417
-
Genomic deletions classify the Beijing/W strains as a distinct genetic lineage of Mycobacterium tuberculosis
-
Tsolaki A.G., Gagneux S., Pym A.S., Goguet De la Salmoniere Y.-O., Kreiswirth B.N., Van Soolingen D., et al. Genomic deletions classify the Beijing/W strains as a distinct genetic lineage of Mycobacterium tuberculosis. J Clin Microbiol 2005, 43:3185-3191.
-
(2005)
J Clin Microbiol
, vol.43
, pp. 3185-3191
-
-
Tsolaki, A.G.1
Gagneux, S.2
Pym, A.S.3
Goguet De la Salmoniere, Y.-O.4
Kreiswirth, B.N.5
Van Soolingen, D.6
-
26
-
-
33846195782
-
Role of large sequence polymorphisms (LSPs) in generating genomic diversity among clinical isolates of Mycobacterium tuberculosis and the utility of LSPs in phylogenetic analysis
-
Alland D., Lacher D.W., Hazbon M.H., Motiwala A.S., Qi W., Fleischmann R.D., et al. Role of large sequence polymorphisms (LSPs) in generating genomic diversity among clinical isolates of Mycobacterium tuberculosis and the utility of LSPs in phylogenetic analysis. J Clin Microbiol 2007, 45:39-46.
-
(2007)
J Clin Microbiol
, vol.45
, pp. 39-46
-
-
Alland, D.1
Lacher, D.W.2
Hazbon, M.H.3
Motiwala, A.S.4
Qi, W.5
Fleischmann, R.D.6
-
27
-
-
84859536900
-
After the bottleneck: genome-wide diversification of the Mycobacterium tuberculosis complex by mutation, recombination, and natural selection
-
Namouchi A., Didelot X., Schock U., Gicquel B., Rocha E.P.C. After the bottleneck: genome-wide diversification of the Mycobacterium tuberculosis complex by mutation, recombination, and natural selection. Genome Res 2012, 22:721-734.
-
(2012)
Genome Res
, vol.22
, pp. 721-734
-
-
Namouchi, A.1
Didelot, X.2
Schock, U.3
Gicquel, B.4
Rocha, E.P.C.5
-
28
-
-
0032508046
-
Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence
-
Cole S.T., Brosch R., Parkhill J., Garnier T., Churcher C., Harris D., et al. Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence. Nature 1998, 393:537-544.
-
(1998)
Nature
, vol.393
, pp. 537-544
-
-
Cole, S.T.1
Brosch, R.2
Parkhill, J.3
Garnier, T.4
Churcher, C.5
Harris, D.6
-
29
-
-
0036777599
-
Whole-genome comparison of Mycobacterium tuberculosis clinical and laboratory strains
-
Fleischmann R.D., Alland D., Eisen J.A., Carpenter L., White O., Peterson J., et al. Whole-genome comparison of Mycobacterium tuberculosis clinical and laboratory strains. J Bacteriol 2002, 184:5479-5490.
-
(2002)
J Bacteriol
, vol.184
, pp. 5479-5490
-
-
Fleischmann, R.D.1
Alland, D.2
Eisen, J.A.3
Carpenter, L.4
White, O.5
Peterson, J.6
-
30
-
-
0037596510
-
The complete genome sequence of Mycobacterium bovis
-
Garnier T., Eiglmeier K., Camus J.C., Medina N., Mansoor H., Pryor M., et al. The complete genome sequence of Mycobacterium bovis. Proc Natl Acad Sci U S A 2003, 100:7877-7882.
-
(2003)
Proc Natl Acad Sci U S A
, vol.100
, pp. 7877-7882
-
-
Garnier, T.1
Eiglmeier, K.2
Camus, J.C.3
Medina, N.4
Mansoor, H.5
Pryor, M.6
-
31
-
-
12244289618
-
Genome-wide analysis of synonymous single nucleotide polymorphisms in Mycobacterium tuberculosis complex organisms: resolution of genetic relationships among closely related microbial strains
-
Gutacker M.M., Smoot J.C., Migliaccio C.A.L., Ricklefs S.M., Hua S., Cousins D.V., et al. Genome-wide analysis of synonymous single nucleotide polymorphisms in Mycobacterium tuberculosis complex organisms: resolution of genetic relationships among closely related microbial strains. Genetics 2002, 162:1533-1543.
-
(2002)
Genetics
, vol.162
, pp. 1533-1543
-
-
Gutacker, M.M.1
Smoot, J.C.2
Migliaccio, C.A.L.3
Ricklefs, S.M.4
Hua, S.5
Cousins, D.V.6
-
32
-
-
29744433066
-
Single-nucleotide polymorphism-based population genetic analysis of Mycobacterium tuberculosis strains from 4 geographic sites
-
Gutacker M.M., Mathema B., Soini H., Shashkina E., Kreiswirth B.N., Graviss E.A., et al. Single-nucleotide polymorphism-based population genetic analysis of Mycobacterium tuberculosis strains from 4 geographic sites. J Infect Dis 2006, 121-128.
-
(2006)
J Infect Dis
, pp. 121-128
-
-
Gutacker, M.M.1
Mathema, B.2
Soini, H.3
Shashkina, E.4
Kreiswirth, B.N.5
Graviss, E.A.6
-
33
-
-
30744460678
-
Global phylogeny of Mycobacterium tuberculosis based on single nucleotide polymorphism (SNP) analysis: insights into tuberculosis evolution, phylogenetic accuracy of other DNA fingerprinting systems, and recommendations for a minimal standard SNP set
-
Filliol I., Motiwala A.S., Cavatore M., Qi W., Hernando Hazbon M., Bobadilla Del Valle M., et al. Global phylogeny of Mycobacterium tuberculosis based on single nucleotide polymorphism (SNP) analysis: insights into tuberculosis evolution, phylogenetic accuracy of other DNA fingerprinting systems, and recommendations for a minimal standard SNP set. J Bacteriol 2006, 188:759-772.
-
(2006)
J Bacteriol
, vol.188
, pp. 759-772
-
-
Filliol, I.1
Motiwala, A.S.2
Cavatore, M.3
Qi, W.4
Hernando Hazbon, M.5
Bobadilla Del Valle, M.6
-
34
-
-
4444240785
-
Silent nucleotide polymorphisms and a phylogeny for Mycobacterium tuberculosis
-
Baker L., Brown T., Maiden M.C., Drobniewski F. Silent nucleotide polymorphisms and a phylogeny for Mycobacterium tuberculosis. Emerg Infect Dis 2004, 1568-1577.
-
(2004)
Emerg Infect Dis
, pp. 1568-1577
-
-
Baker, L.1
Brown, T.2
Maiden, M.C.3
Drobniewski, F.4
-
35
-
-
58149174244
-
High functional diversity in Mycobacterium tuberculosis driven by genetic drift and human demography
-
Hershberg R., Lipatov M., Small P.M., Sheffer H., Niemann S., Homolka S., et al. High functional diversity in Mycobacterium tuberculosis driven by genetic drift and human demography. PLoS Biol 2008, 6:e311.
-
(2008)
PLoS Biol
, vol.6
, pp. e311
-
-
Hershberg, R.1
Lipatov, M.2
Small, P.M.3
Sheffer, H.4
Niemann, S.5
Homolka, S.6
-
36
-
-
45249087278
-
Evolution and diversity of clonal bacteria: the paradigm of Mycobacterium tuberculosis
-
Dos Vultos T., Mestre O., Rauzier J., Golec M., Rastogi N., Rasolofo V., et al. Evolution and diversity of clonal bacteria: the paradigm of Mycobacterium tuberculosis. PLoS ONE 2008, 3:e1538.
-
(2008)
PLoS ONE
, vol.3
, pp. e1538
-
-
Dos Vultos, T.1
Mestre, O.2
Rauzier, J.3
Golec, M.4
Rastogi, N.5
Rasolofo, V.6
-
37
-
-
84863619196
-
High resolution discrimination of clinical Mycobacterium tuberculosis complex strains based on single nucleotide polymorphisms
-
Homolka S., Projahn M., Feuerriegel S., Ubben T., Diel R., Nubel U., et al. High resolution discrimination of clinical Mycobacterium tuberculosis complex strains based on single nucleotide polymorphisms. PLoS ONE 2012, 7.
-
(2012)
PLoS ONE
, vol.7
-
-
Homolka, S.1
Projahn, M.2
Feuerriegel, S.3
Ubben, T.4
Diel, R.5
Nubel, U.6
-
38
-
-
84864111704
-
Two new rapid SNP-typing methods for classifying Mycobacterium tuberculosis complex into the main phylogenetic lineages
-
Stucki D., Malla B., Hostettler S., Huna T., Feldmann J., Yeboah-Manu D., et al. Two new rapid SNP-typing methods for classifying Mycobacterium tuberculosis complex into the main phylogenetic lineages. PLoS ONE 2012, 7.
-
(2012)
PLoS ONE
, vol.7
-
-
Stucki, D.1
Malla, B.2
Hostettler, S.3
Huna, T.4
Feldmann, J.5
Yeboah-Manu, D.6
-
39
-
-
84865182110
-
Combined species identification, genotyping, and drug resistance detection of Mycobacterium tuberculosis Cultures by MLPA on a bead-based array
-
Bergval I., Sengstake S., Brankova N., Levterova V., Abadia E., Tadumaze N., et al. Combined species identification, genotyping, and drug resistance detection of Mycobacterium tuberculosis Cultures by MLPA on a bead-based array. PLoS ONE 2012, 7:e43240.
-
(2012)
PLoS ONE
, vol.7
, pp. e43240
-
-
Bergval, I.1
Sengstake, S.2
Brankova, N.3
Levterova, V.4
Abadia, E.5
Tadumaze, N.6
-
40
-
-
84903674030
-
Optimizing multiplex SNP-based data analysis for genotyping of Mycobacterium tuberculosis isolates
-
Sengstake S., Bablishvili N., Schuitema A., Bzekalava N., Abadia E., de Beer J., et al. Optimizing multiplex SNP-based data analysis for genotyping of Mycobacterium tuberculosis isolates. BMC Genom 2014, 15:572.
-
(2014)
BMC Genom
, vol.15
, pp. 572
-
-
Sengstake, S.1
Bablishvili, N.2
Schuitema, A.3
Bzekalava, N.4
Abadia, E.5
de Beer, J.6
-
41
-
-
0346462903
-
Transfer of a Mycobacterium tuberculosis genotyping method, spoligotyping, from a reverse line-blot hybridization, membrane-based assay to the Luminex multianalyte profiling system
-
Cowan L.S., Diem L., Brake M.C., Crawford J.T. Transfer of a Mycobacterium tuberculosis genotyping method, spoligotyping, from a reverse line-blot hybridization, membrane-based assay to the Luminex multianalyte profiling system. J Clin Microbiol 2004, 42:474-477.
-
(2004)
J Clin Microbiol
, vol.42
, pp. 474-477
-
-
Cowan, L.S.1
Diem, L.2
Brake, M.C.3
Crawford, J.T.4
-
42
-
-
79955133408
-
The use of microbead-based spoligotyping for Mycobacterium tuberculosis complex to evaluate the quality of the conventional method: providing guidelines for quality assurance when working on membranes
-
Abadia E., Zhang J., Ritacco V., Kremer K., Ruimy R., Rigouts L., et al. The use of microbead-based spoligotyping for Mycobacterium tuberculosis complex to evaluate the quality of the conventional method: providing guidelines for quality assurance when working on membranes. BMC Infect Dis 2011, 11.
-
(2011)
BMC Infect Dis
, vol.11
-
-
Abadia, E.1
Zhang, J.2
Ritacco, V.3
Kremer, K.4
Ruimy, R.5
Rigouts, L.6
-
43
-
-
84886535731
-
Tuberculosis-spoligo-rifampin-isoniazid typing: an all-in-one assay technique for surveillance and control of multidrug-resistant tuberculosis on Luminex devices
-
Gomgnimbou M.K., Hernandez-Neuta I., Panaiotov S., Bachiyska E., Palomino J.C., Martin A., et al. Tuberculosis-spoligo-rifampin-isoniazid typing: an all-in-one assay technique for surveillance and control of multidrug-resistant tuberculosis on Luminex devices. J Clin Microbiol 2013, 51:3527-3534.
-
(2013)
J Clin Microbiol
, vol.51
, pp. 3527-3534
-
-
Gomgnimbou, M.K.1
Hernandez-Neuta, I.2
Panaiotov, S.3
Bachiyska, E.4
Palomino, J.C.5
Martin, A.6
-
44
-
-
84859545563
-
Microevolution of extensively drug-resistant tuberculosis in Russia
-
Casali N., Nikolayevskyy V., Balabanova Y., Ignatyeva O., Kontsevaya I., Harris S.R., et al. Microevolution of extensively drug-resistant tuberculosis in Russia. Genome Res 2012, 22:735-745.
-
(2012)
Genome Res
, vol.22
, pp. 735-745
-
-
Casali, N.1
Nikolayevskyy, V.2
Balabanova, Y.3
Ignatyeva, O.4
Kontsevaya, I.5
Harris, S.R.6
-
45
-
-
84895895475
-
Evolution and transmission of drug-resistant tuberculosis in a Russian population
-
Casali N., Nikolayevskyy V., Balabanova Y., Harris S.R., Ignatyeva O., Kontsevaya I., et al. Evolution and transmission of drug-resistant tuberculosis in a Russian population. Nat Genet 2014, 46:279-286.
-
(2014)
Nat Genet
, vol.46
, pp. 279-286
-
-
Casali, N.1
Nikolayevskyy, V.2
Balabanova, Y.3
Harris, S.R.4
Ignatyeva, O.5
Kontsevaya, I.6
-
46
-
-
82455220418
-
Evaluation of Mycobacterium tuberculosis typing methods in a four-year study in Schleswig-Holstein, Northern Germany
-
Roetzer A., Schuback S., Diel R., Gasau F., Ubben T., di Nauta A., et al. Evaluation of Mycobacterium tuberculosis typing methods in a four-year study in Schleswig-Holstein, Northern Germany. J Clin Microbiol 2011, 4173-4178.
-
(2011)
J Clin Microbiol
, pp. 4173-4178
-
-
Roetzer, A.1
Schuback, S.2
Diel, R.3
Gasau, F.4
Ubben, T.5
di Nauta, A.6
-
47
-
-
79951995822
-
Whole-genome sequencing and social-network analysis of a tuberculosis outbreak
-
Gardy J.L., Johnston J.C., Sui S.J.H., Cook V.J., Shah L.N., Brodkin E., et al. Whole-genome sequencing and social-network analysis of a tuberculosis outbreak. N Engl J Med 2011, 364:730-739.
-
(2011)
N Engl J Med
, vol.364
, pp. 730-739
-
-
Gardy, J.L.1
Johnston, J.C.2
Sui, S.J.H.3
Cook, V.J.4
Shah, L.N.5
Brodkin, E.6
-
48
-
-
84872513471
-
Whole-genome sequencing to delineate Mycobacterium tuberculosis outbreaks: a retrospective observational study
-
Walker T.M., Clp C.L., Harrell R.H., Evans J.T., Kapatai G., Dedicoat M.J., et al. Whole-genome sequencing to delineate Mycobacterium tuberculosis outbreaks: a retrospective observational study. Lancet Infect Dis 2013, 13:137-146.
-
(2013)
Lancet Infect Dis
, vol.13
, pp. 137-146
-
-
Walker, T.M.1
Clp, C.L.2
Harrell, R.H.3
Evans, J.T.4
Kapatai, G.5
Dedicoat, M.J.6
-
49
-
-
84891904683
-
Whole genome sequencing reveals complex evolution patterns of multidrug-resistant Mycobacterium tuberculosis Beijing strains in patients
-
Merker M., Kohl T.A., Roetzer A., Truebe L., Richter E., Rüsch-Gerdes S., et al. Whole genome sequencing reveals complex evolution patterns of multidrug-resistant Mycobacterium tuberculosis Beijing strains in patients. PLoS ONE 2013, 8:e82551.
-
(2013)
PLoS ONE
, vol.8
, pp. e82551
-
-
Merker, M.1
Kohl, T.A.2
Roetzer, A.3
Truebe, L.4
Richter, E.5
Rüsch-Gerdes, S.6
-
50
-
-
84891347402
-
Whole genome sequencing analysis of intrapatient microevolution in Mycobacterium tuberculosis: potential impact on the inference of tuberculosis transmission
-
Perez-Lago L., Comas I., Navarro Y., Gonzalez-Candelas F., Herranz M., Bouza E., et al. Whole genome sequencing analysis of intrapatient microevolution in Mycobacterium tuberculosis: potential impact on the inference of tuberculosis transmission. J Infect Dis 2014, 209:98-108.
-
(2014)
J Infect Dis
, vol.209
, pp. 98-108
-
-
Perez-Lago, L.1
Comas, I.2
Navarro, Y.3
Gonzalez-Candelas, F.4
Herranz, M.5
Bouza, E.6
-
51
-
-
77954407500
-
Variation among genome sequences of H37Rv strains of Mycobacterium tuberculosis from multiple laboratories
-
Ioerger T.R., Feng Y., Ganesula K., Chen X., Dobos K.M., Fortune S., et al. Variation among genome sequences of H37Rv strains of Mycobacterium tuberculosis from multiple laboratories. J Bacteriol 2010, 192:3645-3653.
-
(2010)
J Bacteriol
, vol.192
, pp. 3645-3653
-
-
Ioerger, T.R.1
Feng, Y.2
Ganesula, K.3
Chen, X.4
Dobos, K.M.5
Fortune, S.6
-
52
-
-
84555209977
-
Whole-genome sequencing of rifampicin-resistant Mycobacterium tuberculosis strains identifies compensatory mutations in RNA polymerase genes
-
Comas I., Borrell S., Roetzer A., Rose G., Malla B., Kato-Maeda M., et al. Whole-genome sequencing of rifampicin-resistant Mycobacterium tuberculosis strains identifies compensatory mutations in RNA polymerase genes. Nat Genet 2012, 44:106-110.
-
(2012)
Nat Genet
, vol.44
, pp. 106-110
-
-
Comas, I.1
Borrell, S.2
Roetzer, A.3
Rose, G.4
Malla, B.5
Kato-Maeda, M.6
-
53
-
-
79958025510
-
The whole genome sequence of four BCG vaccine strains
-
Pan Y., Yang X., Duan J., Lu N., Leung A.S., Tran V., et al. The whole genome sequence of four BCG vaccine strains. J Bacteriol 2011, 3152-3153.
-
(2011)
J Bacteriol
, pp. 3152-3153
-
-
Pan, Y.1
Yang, X.2
Duan, J.3
Lu, N.4
Leung, A.S.5
Tran, V.6
-
54
-
-
84907983341
-
Impact of in vitro evolution on antigenic diversity of Mycobacterium bovis bacillus Calmette-Guerin (BCG)
-
Copin R., Coscolla M., Efstathiadis E., Gagneux G., Ernst J.D. Impact of in vitro evolution on antigenic diversity of Mycobacterium bovis bacillus Calmette-Guerin (BCG). Vaccine 2014, 32:5998-6004.
-
(2014)
Vaccine
, vol.32
, pp. 5998-6004
-
-
Copin, R.1
Coscolla, M.2
Efstathiadis, E.3
Gagneux, G.4
Ernst, J.D.5
-
55
-
-
79551502352
-
TubercuList - 10 years after
-
Lew J.M., Kapopoulou A., Jones L.M., Cole S.T. TubercuList - 10 years after. Tuberculosis 2011, 91:1-7.
-
(2011)
Tuberculosis
, vol.91
, pp. 1-7
-
-
Lew, J.M.1
Kapopoulou, A.2
Jones, L.M.3
Cole, S.T.4
-
56
-
-
84869471315
-
SpolPred: rapid and accurate prediction of Mycobacterium tuberculosis spoligotypes from short genomic sequences
-
Coll F., Mallard K., Preston M.D., Bentley S., Parkhill J., McNerney R., et al. SpolPred: rapid and accurate prediction of Mycobacterium tuberculosis spoligotypes from short genomic sequences. Bioinformatics 2012, 28:2991-2993.
-
(2012)
Bioinformatics
, vol.28
, pp. 2991-2993
-
-
Coll, F.1
Mallard, K.2
Preston, M.D.3
Bentley, S.4
Parkhill, J.5
McNerney, R.6
-
57
-
-
84908067889
-
Targeted and direct variant calling from FastQ reads of bacterial genomes
-
Steiner A., Stucki D., Coscolla M., Borrell S., Gagneux S., Kvar Q. Targeted and direct variant calling from FastQ reads of bacterial genomes. BMC Genom 2014, 15:881.
-
(2014)
BMC Genom
, vol.15
, pp. 881
-
-
Steiner, A.1
Stucki, D.2
Coscolla, M.3
Borrell, S.4
Gagneux, S.5
Kvar, Q.6
-
58
-
-
33644617473
-
Ecotypes of the Mycobacterium tuberculosis complex
-
Smith N.H., Kremer K., Inwald J., Dale J., Driscoll J.R., Gordon S.V., et al. Ecotypes of the Mycobacterium tuberculosis complex. J Theor Biol 2006, 239:220-225.
-
(2006)
J Theor Biol
, vol.239
, pp. 220-225
-
-
Smith, N.H.1
Kremer, K.2
Inwald, J.3
Dale, J.4
Driscoll, J.R.5
Gordon, S.V.6
-
59
-
-
0028020888
-
Tuberculosis in imported hyrax (Procavia capensis) caused by an unusual variant belonging to the Mycobacterium tuberculosis complex
-
Cousins D.V., Peet R.L., Gaynor W.T., Williams S.N., Gow B.L. Tuberculosis in imported hyrax (Procavia capensis) caused by an unusual variant belonging to the Mycobacterium tuberculosis complex. Vet Microbiol 1994, 42:135-145.
-
(1994)
Vet Microbiol
, vol.42
, pp. 135-145
-
-
Cousins, D.V.1
Peet, R.L.2
Gaynor, W.T.3
Williams, S.N.4
Gow, B.L.5
-
60
-
-
77956042547
-
Novel Mycobacterium tuberculosis complex pathogen, M. mungi
-
Alexander K.A., Laver P.N., Michel A.L., Williams M., van Helden P.D., Warren R.M., et al. Novel Mycobacterium tuberculosis complex pathogen, M. mungi. Emerg Infect Dis 2010, 1296-1299.
-
(2010)
Emerg Infect Dis
, pp. 1296-1299
-
-
Alexander, K.A.1
Laver, P.N.2
Michel, A.L.3
Williams, M.4
van Helden, P.D.5
Warren, R.M.6
-
61
-
-
84877952512
-
Novel Mycobacterium tuberculosis complex isolate from a wild chimpanzee
-
Coscolla M., Lewin A., Metzger S., Maetz-Rennsing K., Calvignac-Spencer S., Nitsche A., et al. Novel Mycobacterium tuberculosis complex isolate from a wild chimpanzee. Emerg Infect Dis 2013, 19:969-976.
-
(2013)
Emerg Infect Dis
, vol.19
, pp. 969-976
-
-
Coscolla, M.1
Lewin, A.2
Metzger, S.3
Maetz-Rennsing, K.4
Calvignac-Spencer, S.5
Nitsche, A.6
-
62
-
-
84888118616
-
Novel cause of tuberculosis in Meerkats, South Africa
-
Parsons S.D.C., Drewe J.A., van Pittius N.C.G., Warren R.M., van Heiden P.D. Novel cause of tuberculosis in Meerkats, South Africa. Emerg Infect Dis 2013, 19:2004-2007.
-
(2013)
Emerg Infect Dis
, vol.19
, pp. 2004-2007
-
-
Parsons, S.D.C.1
Drewe, J.A.2
van Pittius, N.C.G.3
Warren, R.M.4
van Heiden, P.D.5
-
63
-
-
0014743424
-
Infection caused by atypical mycobacteria and antituberculous immunity
-
Canetti G. Infection caused by atypical mycobacteria and antituberculous immunity. Lille Med 1970, 15:280-282.
-
(1970)
Lille Med
, vol.15
, pp. 280-282
-
-
Canetti, G.1
-
64
-
-
0030870296
-
A novel pathogenic taxon of the Mycobacterium tuberculosis complex, Canetti: characterization of an exceptional isolate from Africa
-
van Soolingen D., Hoogenboezem T., de Haas P.E.W., Hermans P.W.M., Koedam M.A., Teppema K.S., et al. A novel pathogenic taxon of the Mycobacterium tuberculosis complex, Canetti: characterization of an exceptional isolate from Africa. Int J Syst Bacteriol 1997, 47:1236-1245.
-
(1997)
Int J Syst Bacteriol
, vol.47
, pp. 1236-1245
-
-
van Soolingen, D.1
Hoogenboezem, T.2
de Haas, P.E.W.3
Hermans, P.W.M.4
Koedam, M.A.5
Teppema, K.S.6
-
65
-
-
84873095223
-
Genomic analysis of smooth tubercle bacilli provides insights into ancestry and pathoadaptation of Mycobacterium tuberculosis
-
Supply P., Marceau M., Mangenot S., Roche D., Rouanet C., Khanna V., et al. Genomic analysis of smooth tubercle bacilli provides insights into ancestry and pathoadaptation of Mycobacterium tuberculosis. Nat Genet 2013, 45:172-179.
-
(2013)
Nat Genet
, vol.45
, pp. 172-179
-
-
Supply, P.1
Marceau, M.2
Mangenot, S.3
Roche, D.4
Rouanet, C.5
Khanna, V.6
-
66
-
-
77951051763
-
Ancient origin and gene mosaicism of the progenitor of Mycobacterium tuberculosis
-
Gutierrez M.C., Brisse S., Brosch R., Fabre M., Omaïs B., Marmiesse M., et al. Ancient origin and gene mosaicism of the progenitor of Mycobacterium tuberculosis. PLoS Pathog 2005, 1:e5.
-
(2005)
PLoS Pathog
, vol.1
, pp. e5
-
-
Gutierrez, M.C.1
Brisse, S.2
Brosch, R.3
Fabre, M.4
Omaïs, B.5
Marmiesse, M.6
-
67
-
-
84890945038
-
Progenitor "Mycobacterium canettii" clone responsible for lymph node tuberculosis epidemic, Djibouti
-
Blouin Y., Cazajous G., Dehan C., Soler C., Vong R., Hassan M.O., et al. Progenitor "Mycobacterium canettii" clone responsible for lymph node tuberculosis epidemic, Djibouti. Emerg Infect Dis 2014, 20:21-28.
-
(2014)
Emerg Infect Dis
, vol.20
, pp. 21-28
-
-
Blouin, Y.1
Cazajous, G.2
Dehan, C.3
Soler, C.4
Vong, R.5
Hassan, M.O.6
-
68
-
-
0037133653
-
A new evolutionary scenario for the Mycobacterium tuberculosis complex
-
Brosch R., Gordon S.V., Marmiesse M., Brodin P., Buchrieser C., Eiglmeier K., et al. A new evolutionary scenario for the Mycobacterium tuberculosis complex. Proc Natl Acad Sci U S A 2002, 99:3684-3689.
-
(2002)
Proc Natl Acad Sci U S A
, vol.99
, pp. 3684-3689
-
-
Brosch, R.1
Gordon, S.V.2
Marmiesse, M.3
Brodin, P.4
Buchrieser, C.5
Eiglmeier, K.6
-
69
-
-
53049085393
-
Origin, spread and demography of the Mycobacterium tuberculosis complex
-
Wirth T., Hildebrand F., Allix-Beguec C., Wölbeling F., Kubica T., Kremer K., et al. Origin, spread and demography of the Mycobacterium tuberculosis complex. PLoS Pathog 2008, 4:e1000160.
-
(2008)
PLoS Pathog
, vol.4
, pp. e1000160
-
-
Wirth, T.1
Hildebrand, F.2
Allix-Beguec, C.3
Wölbeling, F.4
Kubica, T.5
Kremer, K.6
-
70
-
-
65249145161
-
Major Mycobacterium tuberculosis lineages associate with patient country of origin
-
Reed M.B., Pichler V.K., McIntosh F., Mattia A., Fallow A., Masala S., et al. Major Mycobacterium tuberculosis lineages associate with patient country of origin. J Clin Microbiol 2009, 47:1119-1128.
-
(2009)
J Clin Microbiol
, vol.47
, pp. 1119-1128
-
-
Reed, M.B.1
Pichler, V.K.2
McIntosh, F.3
Mattia, A.4
Fallow, A.5
Masala, S.6
-
71
-
-
78149243438
-
Mycobacterium africanum - review of an important cause of human tuberculosis in West Africa
-
de Jong B.C., Antonio M., Gagneux S. Mycobacterium africanum - review of an important cause of human tuberculosis in West Africa. PLoS Negl Trop Dis 2010, 4.
-
(2010)
PLoS Negl Trop Dis
, vol.4
-
-
de Jong, B.C.1
Antonio, M.2
Gagneux, S.3
-
72
-
-
84885450674
-
The first phylogeographic population structure and analysis of transmission dynamics of M. africanum West African combining molecular data from Benin, Nigeria and Sierra Leone
-
Gehre F., Antonio M., Fahun F., Odoun M., Uwizeye C., de Rijk P., et al. The first phylogeographic population structure and analysis of transmission dynamics of M. africanum West African combining molecular data from Benin, Nigeria and Sierra Leone. PLoS ONE 2013, 8:e77000.
-
(2013)
PLoS ONE
, vol.8
, pp. e77000
-
-
Gehre, F.1
Antonio, M.2
Fahun, F.3
Odoun, M.4
Uwizeye, C.5
de Rijk, P.6
-
73
-
-
84871652718
-
Significance of the identification in the horn of Africa of an exceptionally deep branching Mycobacterium tuberculosis clade
-
Blouin Y., Hauck Y., Soler C., Fabre M., Vong R., Dehan C., et al. Significance of the identification in the horn of Africa of an exceptionally deep branching Mycobacterium tuberculosis clade. PLoS ONE 2012, 7.
-
(2012)
PLoS ONE
, vol.7
-
-
Blouin, Y.1
Hauck, Y.2
Soler, C.3
Fabre, M.4
Vong, R.5
Dehan, C.6
-
74
-
-
84871683865
-
Mycobacterial lineages causing pulmonary and extrapulmonary tuberculosis, Ethiopia
-
Firdessa R., Berg S., Hailu E., Schelling E., Gumi B., Erenso G., et al. Mycobacterial lineages causing pulmonary and extrapulmonary tuberculosis, Ethiopia. Emerg Infect Dis 2013, 19:460-463.
-
(2013)
Emerg Infect Dis
, vol.19
, pp. 460-463
-
-
Firdessa, R.1
Berg, S.2
Hailu, E.3
Schelling, E.4
Gumi, B.5
Erenso, G.6
-
75
-
-
84911892466
-
Pre-Columbian mycobacterial genomes reveal seals as a source of New World human tuberculosis
-
[Epub ahead of print]
-
Bos K.I., Harkins K.M., Herbig A., Coscolla M., Weber N., Comas I., et al. Pre-Columbian mycobacterial genomes reveal seals as a source of New World human tuberculosis. Nature 2014, [Epub ahead of print].
-
(2014)
Nature
-
-
Bos, K.I.1
Harkins, K.M.2
Herbig, A.3
Coscolla, M.4
Weber, N.5
Comas, I.6
-
76
-
-
84884995578
-
Out-of-Africa migration and Neolithic coexpansion of Mycobacterium tuberculosis with modern humans
-
Comas I., Coscolla M., Luo T., Borrell S., Holt K.E., Kato-Maeda M., et al. Out-of-Africa migration and Neolithic coexpansion of Mycobacterium tuberculosis with modern humans. Nat Genet 2013, 45:1176-1182.
-
(2013)
Nat Genet
, vol.45
, pp. 1176-1182
-
-
Comas, I.1
Coscolla, M.2
Luo, T.3
Borrell, S.4
Holt, K.E.5
Kato-Maeda, M.6
-
77
-
-
77952841173
-
Human T cell epitopes of Mycobacterium tuberculosis are evolutionarily hyperconserved
-
Comas I., Chakravartti J., Small P.M., Galagan J., Niemann S., Kremer K., et al. Human T cell epitopes of Mycobacterium tuberculosis are evolutionarily hyperconserved. Nat Genet 2010, 42:498-503.
-
(2010)
Nat Genet
, vol.42
, pp. 498-503
-
-
Comas, I.1
Chakravartti, J.2
Small, P.M.3
Galagan, J.4
Niemann, S.5
Kremer, K.6
-
78
-
-
84888432770
-
Mapping of genotype-phenotype diversity among clinical isolates of Mycobacterium tuberculosis by sequence-based transcriptional profiling
-
Rose G., Cortes T., Comas I., Coscolla M., Gagneux S., Young D.B. Mapping of genotype-phenotype diversity among clinical isolates of Mycobacterium tuberculosis by sequence-based transcriptional profiling. Genome Biol Evol 2013, 5:1849-1862.
-
(2013)
Genome Biol Evol
, vol.5
, pp. 1849-1862
-
-
Rose, G.1
Cortes, T.2
Comas, I.3
Coscolla, M.4
Gagneux, S.5
Young, D.B.6
-
79
-
-
53849111617
-
Evolution, population structure, and phylogeography of genetically monomorphic bacterial pathogens
-
Achtman M. Evolution, population structure, and phylogeography of genetically monomorphic bacterial pathogens. Annu Rev Microbiol 2008, 62:53-70.
-
(2008)
Annu Rev Microbiol
, vol.62
, pp. 53-70
-
-
Achtman, M.1
-
80
-
-
84862785625
-
Evolutionary information hidden in a single protein structure
-
Shih C.H., Chang C.M., Lin Y.S., Lo W.C., Hwang J.K. Evolutionary information hidden in a single protein structure. Proteins 2012, 80:1647-1657.
-
(2012)
Proteins
, vol.80
, pp. 1647-1657
-
-
Shih, C.H.1
Chang, C.M.2
Lin, Y.S.3
Lo, W.C.4
Hwang, J.K.5
-
81
-
-
84884992001
-
Genomic analysis identifies targets of convergent positive selection in drug-resistant Mycobacterium tuberculosis
-
Farhat M.R., Shapiro B.J., Kieser K.J., Sultana R., Jacobson K.R., Victor T.C., et al. Genomic analysis identifies targets of convergent positive selection in drug-resistant Mycobacterium tuberculosis. Nat Genet 2013, 45:1183-1189.
-
(2013)
Nat Genet
, vol.45
, pp. 1183-1189
-
-
Farhat, M.R.1
Shapiro, B.J.2
Kieser, K.J.3
Sultana, R.4
Jacobson, K.R.5
Victor, T.C.6
-
82
-
-
84885009252
-
Genome sequencing of 161 Mycobacterium tuberculosis isolates from China identifies genes and intergenic regions associated with drug resistance
-
Zhang H.T., Li D.F., Zhao L.L., Fleming J., Lin N., Wang T., et al. Genome sequencing of 161 Mycobacterium tuberculosis isolates from China identifies genes and intergenic regions associated with drug resistance. Nat Genet 2013, 45:1255-1260.
-
(2013)
Nat Genet
, vol.45
, pp. 1255-1260
-
-
Zhang, H.T.1
Li, D.F.2
Zhao, L.L.3
Fleming, J.4
Lin, N.5
Wang, T.6
-
83
-
-
84877727980
-
Evidence for diversifying selection in a set of Mycobacterium tuberculosis genes in response to antibiotic- and nonantibiotic-related pressure
-
Osorio N.S., Rodrigues F., Gagneux S., Pedrosa J., Pinto-Carbo M., Castro A.G., et al. Evidence for diversifying selection in a set of Mycobacterium tuberculosis genes in response to antibiotic- and nonantibiotic-related pressure. Mol Biol Evol 2013, 30:1326-1336.
-
(2013)
Mol Biol Evol
, vol.30
, pp. 1326-1336
-
-
Osorio, N.S.1
Rodrigues, F.2
Gagneux, S.3
Pedrosa, J.4
Pinto-Carbo, M.5
Castro, A.G.6
-
84
-
-
34948827426
-
Patterns of antigenic diversity and the mechanisms that maintain them
-
Lipsitch M., O'Hagan J. Patterns of antigenic diversity and the mechanisms that maintain them. J R Soc Interface 2007, 4:787-802.
-
(2007)
J R Soc Interface
, vol.4
, pp. 787-802
-
-
Lipsitch, M.1
O'Hagan, J.2
-
85
-
-
0031196416
-
Characteristics of tuberculosis patients who generate secondary cases
-
Rodrigo T., Cayla J.A., de Olalla P.G., Galdos Tanguis H., Jansa J.M., Miranda P., et al. Characteristics of tuberculosis patients who generate secondary cases. Int J Tuberc Lung Dis 1997, 1:352-357.
-
(1997)
Int J Tuberc Lung Dis
, vol.1
, pp. 352-357
-
-
Rodrigo, T.1
Cayla, J.A.2
de Olalla, P.G.3
Galdos Tanguis, H.4
Jansa, J.M.5
Miranda, P.6
-
86
-
-
84878521932
-
Deciphering the growth behaviour of Mycobacterium africanum
-
Gehre F., Otu J., De Riemer K., de Sessions P.F., Hibberd M.L., Mulders W., et al. Deciphering the growth behaviour of Mycobacterium africanum. PLoS Negl Trop Dis 2013, 7:e2220.
-
(2013)
PLoS Negl Trop Dis
, vol.7
, pp. e2220
-
-
Gehre, F.1
Otu, J.2
De Riemer, K.3
de Sessions, P.F.4
Hibberd, M.L.5
Mulders, W.6
-
87
-
-
84865087860
-
Modern lineages of Mycobacterium tuberculosis exhibit lineage-specific patterns of growth and cytokine induction in human monocyte-derived macrophages
-
Sarkar R., Lenders L., Wilkinson K.A., Wilkinson R.J., Nicol M.P. Modern lineages of Mycobacterium tuberculosis exhibit lineage-specific patterns of growth and cytokine induction in human monocyte-derived macrophages. PLoS ONE 2012, 7:e43170.
-
(2012)
PLoS ONE
, vol.7
, pp. e43170
-
-
Sarkar, R.1
Lenders, L.2
Wilkinson, K.A.3
Wilkinson, R.J.4
Nicol, M.P.5
-
88
-
-
77957671514
-
Functional genetic diversity among Mycobacterium tuberculosis complex clinical isolates: delineation of conserved core and lineage-specific transcriptomes during intracellular survival
-
Homolka S., Niemann S., Russell D.G., Rohde K.H. Functional genetic diversity among Mycobacterium tuberculosis complex clinical isolates: delineation of conserved core and lineage-specific transcriptomes during intracellular survival. PLoS Pathog 2010, 6:e1000988.
-
(2010)
PLoS Pathog
, vol.6
, pp. e1000988
-
-
Homolka, S.1
Niemann, S.2
Russell, D.G.3
Rohde, K.H.4
-
89
-
-
80052530215
-
Mycobacterium tuberculosis lineage influences innate immune response and virulence and is associated with distinct cell envelope lipid profiles
-
Krishnan N., Malaga W., Constant P., Caws M., Thi Hoang Chau T., Salmons J., et al. Mycobacterium tuberculosis lineage influences innate immune response and virulence and is associated with distinct cell envelope lipid profiles. PLoS ONE 2011, 6:e23870.
-
(2011)
PLoS ONE
, vol.6
, pp. e23870
-
-
Krishnan, N.1
Malaga, W.2
Constant, P.3
Caws, M.4
Thi Hoang Chau, T.5
Salmons, J.6
-
90
-
-
84872234951
-
High throughput phenotypic analysis of Mycobacterium tuberculosis and Mycobacterium bovis strains' metabolism using biolog phenotype microarrays
-
Khatri B., Fielder M., Jones G., Newell W., Abu-Oun M., Wheeler P.R. High throughput phenotypic analysis of Mycobacterium tuberculosis and Mycobacterium bovis strains' metabolism using biolog phenotype microarrays. PLoS ONE 2013, 8:e52673.
-
(2013)
PLoS ONE
, vol.8
, pp. e52673
-
-
Khatri, B.1
Fielder, M.2
Jones, G.3
Newell, W.4
Abu-Oun, M.5
Wheeler, P.R.6
-
91
-
-
84913605775
-
Lipidomics and genomics of Mycobacterium tuberculosis reveal lineage-specific trends in mycolic acid biosynthesis
-
Portevin D., Sukumar S., Coscolla M., Shui G., Li B., Guan X.L., et al. Lipidomics and genomics of Mycobacterium tuberculosis reveal lineage-specific trends in mycolic acid biosynthesis. Microbiol Open 2014.
-
(2014)
Microbiol Open
-
-
Portevin, D.1
Sukumar, S.2
Coscolla, M.3
Shui, G.4
Li, B.5
Guan, X.L.6
-
92
-
-
78851469937
-
Molecular structure of the Mycobacterium tuberculosis virulence factor, mycolic acid, determines the elicited inflammatory pattern
-
Vander Beken S., Al Dulayymi J.R., Naessens T., Koza G., Maza-Iglesias M., Rowles R., et al. Molecular structure of the Mycobacterium tuberculosis virulence factor, mycolic acid, determines the elicited inflammatory pattern. Eur J Immunol 2011, 41:450-460.
-
(2011)
Eur J Immunol
, vol.41
, pp. 450-460
-
-
Vander Beken, S.1
Al Dulayymi, J.R.2
Naessens, T.3
Koza, G.4
Maza-Iglesias, M.5
Rowles, R.6
-
93
-
-
0029048109
-
Identification of a gene involved in the biosynthesis of cyclopropanated mycolic acids in Mycobacterium tuberculosis
-
Yuan Y., Lee R.E., Besra G.S., Belisle J.T., Barry C.E. Identification of a gene involved in the biosynthesis of cyclopropanated mycolic acids in Mycobacterium tuberculosis. Proc Natl Acad Sci USA 1995, 92:6630-6634.
-
(1995)
Proc Natl Acad Sci USA
, vol.92
, pp. 6630-6634
-
-
Yuan, Y.1
Lee, R.E.2
Besra, G.S.3
Belisle, J.T.4
Barry, C.E.5
-
94
-
-
84875264261
-
The heterogeneous evolution of multidrug-resistant Mycobacterium tuberculosis
-
Muller B., Borrell S., Rose G., Gagneux S. The heterogeneous evolution of multidrug-resistant Mycobacterium tuberculosis. Trends Genet 2013, 29:160-169.
-
(2013)
Trends Genet
, vol.29
, pp. 160-169
-
-
Muller, B.1
Borrell, S.2
Rose, G.3
Gagneux, S.4
-
95
-
-
84903885450
-
Evolution of drug resistance in tuberculosis: recent progress and implications for diagnosis and therapy
-
Trauner A., Borrell S., Reither K., Gagneux S. Evolution of drug resistance in tuberculosis: recent progress and implications for diagnosis and therapy. Drugs 2014, 1063-1072.
-
(2014)
Drugs
, pp. 1063-1072
-
-
Trauner, A.1
Borrell, S.2
Reither, K.3
Gagneux, S.4
-
96
-
-
54849428103
-
PhoP, a key player in Mycobacterium tuberculosis virulence
-
Ryndak M., Wang S., Smith I. PhoP, a key player in Mycobacterium tuberculosis virulence. Trends Microbiol 2008, 16:528-534.
-
(2008)
Trends Microbiol
, vol.16
, pp. 528-534
-
-
Ryndak, M.1
Wang, S.2
Smith, I.3
-
97
-
-
38949085941
-
A point mutation in the two-component regulator PhoP-PhoR accounts for the absence of polyketide-derived acyltrehaloses but not that of phthiocerol dimycocerosates in Mycobacterium tuberculosis H37Ra
-
Chesne-Seck M.L., Barilone N., Boudou F., Asensio J.G., Kolattukudy P.E., Martin C., et al. A point mutation in the two-component regulator PhoP-PhoR accounts for the absence of polyketide-derived acyltrehaloses but not that of phthiocerol dimycocerosates in Mycobacterium tuberculosis H37Ra. J Bacteriol 2008, 190:1329-1334.
-
(2008)
J Bacteriol
, vol.190
, pp. 1329-1334
-
-
Chesne-Seck, M.L.1
Barilone, N.2
Boudou, F.3
Asensio, J.G.4
Kolattukudy, P.E.5
Martin, C.6
-
98
-
-
84905661582
-
Evolutionary history of tuberculosis shaped by conserved mutations in the PhoPR virulence regulator
-
Gonzalo-Asensio J.s., Malaga W., Pawlik A., Astarie-Dequeker C., Passemar C., Moreau F., et al. Evolutionary history of tuberculosis shaped by conserved mutations in the PhoPR virulence regulator. Proc Natl Acad Sci USA 2014.
-
(2014)
Proc Natl Acad Sci USA
-
-
Gonzalo-Asensio, J.1
Malaga, W.2
Pawlik, A.3
Astarie-Dequeker, C.4
Passemar, C.5
Moreau, F.6
-
99
-
-
84884753898
-
DNA methylation impacts gene expression and ensures hypoxic survival of Mycobacterium tuberculosis
-
Shell S.S., Prestwich E.G., Baek S.H., Shah R.R., Sassetti C.M., Dedon P.C., et al. DNA methylation impacts gene expression and ensures hypoxic survival of Mycobacterium tuberculosis. PLoS Pathog 2013, 9:e1003419.
-
(2013)
PLoS Pathog
, vol.9
, pp. e1003419
-
-
Shell, S.S.1
Prestwich, E.G.2
Baek, S.H.3
Shah, R.R.4
Sassetti, C.M.5
Dedon, P.C.6
-
100
-
-
84908105255
-
A silent mutation in mabA confers isoniazid resistance on Mycobacterium tuberculosis
-
Ando H., Miyoshi-Akiyama T., Watanabe S., Kirikae T. A silent mutation in mabA confers isoniazid resistance on Mycobacterium tuberculosis. Mol Microbiol 2014, 91:538-547.
-
(2014)
Mol Microbiol
, vol.91
, pp. 538-547
-
-
Ando, H.1
Miyoshi-Akiyama, T.2
Watanabe, S.3
Kirikae, T.4
-
101
-
-
0028156861
-
InhA, a gene encoding a target for isoniazid and ethionamide in Mycobacterium tuberculosis
-
Banerjee A., Dubnau E., Quemard A., Balasubramanian V., Um K.S., Wilson T., et al. inhA, a gene encoding a target for isoniazid and ethionamide in Mycobacterium tuberculosis. Science 1994, 263:227-230.
-
(1994)
Science
, vol.263
, pp. 227-230
-
-
Banerjee, A.1
Dubnau, E.2
Quemard, A.3
Balasubramanian, V.4
Um, K.S.5
Wilson, T.6
-
102
-
-
33750828139
-
Molecular characterization of isoniazid-resistant clinical isolates of Mycobacterium tuberculosis from the USA
-
Guo H., Seet Q., Denkin S., Parsons L., Zhang Y. Molecular characterization of isoniazid-resistant clinical isolates of Mycobacterium tuberculosis from the USA. J Med Microbiol 2006, 55:1527-1531.
-
(2006)
J Med Microbiol
, vol.55
, pp. 1527-1531
-
-
Guo, H.1
Seet, Q.2
Denkin, S.3
Parsons, L.4
Zhang, Y.5
-
103
-
-
0035931926
-
Massive gene decay in the leprosy bacillus
-
Cole S.T., Eiglmeier K., Parkhill J., James K.D., Thomson N.R., Wheeler P.R., et al. Massive gene decay in the leprosy bacillus. Nature 2001, 409:1007-1011.
-
(2001)
Nature
, vol.409
, pp. 1007-1011
-
-
Cole, S.T.1
Eiglmeier, K.2
Parkhill, J.3
James, K.D.4
Thomson, N.R.5
Wheeler, P.R.6
-
104
-
-
84857878540
-
The genome of Mycobacterium africanum West African 2 reveals a lineage-specific locus and genome erosion common to the M. tuberculosis complex
-
Bentley S.D., Comas I., Bryant J.M., Walker D., Smith N.H., Harris S.R., et al. The genome of Mycobacterium africanum West African 2 reveals a lineage-specific locus and genome erosion common to the M. tuberculosis complex. PLoS Negl Trop Dis 2012, 6:e1552.
-
(2012)
PLoS Negl Trop Dis
, vol.6
, pp. e1552
-
-
Bentley, S.D.1
Comas, I.2
Bryant, J.M.3
Walker, D.4
Smith, N.H.5
Harris, S.R.6
-
105
-
-
41649110614
-
Gene duplications, robustness and evolutionary innovations
-
Wagner A. Gene duplications, robustness and evolutionary innovations. Bioessays 2008, 30:367-373.
-
(2008)
Bioessays
, vol.30
, pp. 367-373
-
-
Wagner, A.1
-
106
-
-
33751323180
-
Evolution and expansion of the Mycobacterium tuberculosis PE and PPE multigene families and their association with the duplication of the ESAT-6 (esx) gene cluster regions
-
Gey Van Pittius N., Sampson S., Lee H., Kim Y., Van Helden P., Warren R. Evolution and expansion of the Mycobacterium tuberculosis PE and PPE multigene families and their association with the duplication of the ESAT-6 (esx) gene cluster regions. BMC Evol Biol 2006, 6:95.
-
(2006)
BMC Evol Biol
, vol.6
, pp. 95
-
-
Gey Van Pittius, N.1
Sampson, S.2
Lee, H.3
Kim, Y.4
Van Helden, P.5
Warren, R.6
-
107
-
-
12344304227
-
Defining putative T cell epitopes from PE and PPE families of proteins of Mycobacterium tuberculosis with vaccine potential
-
Chaitra M.G., Hariharaputran S., Chandra N.R., Shaila M.S., Nayak R. Defining putative T cell epitopes from PE and PPE families of proteins of Mycobacterium tuberculosis with vaccine potential. Vaccine 2005, 23:1265-1272.
-
(2005)
Vaccine
, vol.23
, pp. 1265-1272
-
-
Chaitra, M.G.1
Hariharaputran, S.2
Chandra, N.R.3
Shaila, M.S.4
Nayak, R.5
-
108
-
-
34648814055
-
Modulation of immune responses in mice to recombinant antigens from PE and PPE families of proteins of Mycobacterium tuberculosis by the Ribi adjuvant
-
Chaitra M.G., Nayak R., Shaila M.S. Modulation of immune responses in mice to recombinant antigens from PE and PPE families of proteins of Mycobacterium tuberculosis by the Ribi adjuvant. Vaccine 2007, 25:7168-7176.
-
(2007)
Vaccine
, vol.25
, pp. 7168-7176
-
-
Chaitra, M.G.1
Nayak, R.2
Shaila, M.S.3
-
109
-
-
48549086458
-
Detection of interferon gamma-secreting CD8+ T lymphocytes in humans specific for three PE/PPE proteins of Mycobacterium tuberculosis
-
Chaitra M.G., Shaila M.S., Nayak R. Detection of interferon gamma-secreting CD8+ T lymphocytes in humans specific for three PE/PPE proteins of Mycobacterium tuberculosis. Microbes Infect 2008, 10:858-867.
-
(2008)
Microbes Infect
, vol.10
, pp. 858-867
-
-
Chaitra, M.G.1
Shaila, M.S.2
Nayak, R.3
-
110
-
-
26944437440
-
Variation of the Mycobacterium tuberculosis PE_PGRS33 gene among clinical isolates
-
Talarico S., Cave M.D., Marrs C.F., Foxman B., Zhang L., Yang Z. Variation of the Mycobacterium tuberculosis PE_PGRS33 gene among clinical isolates. J Clin Microbiol 2005, 43:4954-4960.
-
(2005)
J Clin Microbiol
, vol.43
, pp. 4954-4960
-
-
Talarico, S.1
Cave, M.D.2
Marrs, C.F.3
Foxman, B.4
Zhang, L.5
Yang, Z.6
-
111
-
-
33846575669
-
Insights into the evolutionary history of tubercle bacilli as disclosed by genetic rearrangements within a PE_PGRS duplicated gene pair
-
Karboul A., Gey van Pittius N., Namouchi A., Vincent V., Sola C., Rastogi N., et al. Insights into the evolutionary history of tubercle bacilli as disclosed by genetic rearrangements within a PE_PGRS duplicated gene pair. BMC Evol Biol 2006, 6:107.
-
(2006)
BMC Evol Biol
, vol.6
, pp. 107
-
-
Karboul, A.1
Gey van Pittius, N.2
Namouchi, A.3
Vincent, V.4
Sola, C.5
Rastogi, N.6
-
112
-
-
45849108709
-
Mycobacterium tuberculosis PE_PGRS16 and PE_PGRS26 genetic polymorphism among clinical isolates
-
Talarico S., Zhang L., Marrs C.F., Foxman B., Cave M.D., Brennan M.J., et al. Mycobacterium tuberculosis PE_PGRS16 and PE_PGRS26 genetic polymorphism among clinical isolates. Tuberculosis 2008, 88:283-294.
-
(2008)
Tuberculosis
, vol.88
, pp. 283-294
-
-
Talarico, S.1
Zhang, L.2
Marrs, C.F.3
Foxman, B.4
Cave, M.D.5
Brennan, M.J.6
-
113
-
-
70350499473
-
Evidence for a rapid rate of molecular evolution at the hypervariable and immunogenic Mycobacterium tuberculosis PPE38 gene region
-
McEvoy C., van Helden P., Warren R., van Pittius N. Evidence for a rapid rate of molecular evolution at the hypervariable and immunogenic Mycobacterium tuberculosis PPE38 gene region. BMC Evol Biol 2009, 9:237.
-
(2009)
BMC Evol Biol
, vol.9
, pp. 237
-
-
McEvoy, C.1
van Helden, P.2
Warren, R.3
van Pittius, N.4
-
114
-
-
84903367776
-
Sequence diversity in the PE_PGRS genes of Mycobacterium tuberculosis is independent of human T cell recognition
-
Copin R., Coscolla M., Seiffert S.N., Bothamley G., Sutherland J., Mbayo G., et al. Sequence diversity in the PE_PGRS genes of Mycobacterium tuberculosis is independent of human T cell recognition. mBio 2014, 5.
-
(2014)
mBio
, vol.5
-
-
Copin, R.1
Coscolla, M.2
Seiffert, S.N.3
Bothamley, G.4
Sutherland, J.5
Mbayo, G.6
-
115
-
-
33751344467
-
Expression of the PE_PGRS 33 protein in Mycobacterium smegmatis triggers necrosis in macrophages and enhanced mycobacterial survival
-
Dheenadhayalan V., Delogu G., Brennan M.J. Expression of the PE_PGRS 33 protein in Mycobacterium smegmatis triggers necrosis in macrophages and enhanced mycobacterial survival. Microbes Infect 2005.
-
(2005)
Microbes Infect
-
-
Dheenadhayalan, V.1
Delogu, G.2
Brennan, M.J.3
-
116
-
-
80053958688
-
Integrative analysis of transcriptome and genome indicates two potential genomic islands are associated with pathogenesis of Mycobacterium tuberculosis
-
Yu G., Fu X., Jin K., Zhang L., Wu W., Cui Z., et al. Integrative analysis of transcriptome and genome indicates two potential genomic islands are associated with pathogenesis of Mycobacterium tuberculosis. Gene 2011, 489:21-29.
-
(2011)
Gene
, vol.489
, pp. 21-29
-
-
Yu, G.1
Fu, X.2
Jin, K.3
Zhang, L.4
Wu, W.5
Cui, Z.6
-
117
-
-
77956509403
-
Massive gene duplication event among clinical isolates of the Mycobacterium tuberculosis W/Beijing family
-
Domenech P., Kolly G.S., Leon-Solis L., Fallow A., Reed M.B. Massive gene duplication event among clinical isolates of the Mycobacterium tuberculosis W/Beijing family. J Bacteriol 2010, 192:4562-4570.
-
(2010)
J Bacteriol
, vol.192
, pp. 4562-4570
-
-
Domenech, P.1
Kolly, G.S.2
Leon-Solis, L.3
Fallow, A.4
Reed, M.B.5
-
118
-
-
84863411118
-
Independent large scale duplications in multiple M. tuberculosis lineages overlapping the same genomic region
-
Weiner B., Gomez J., Victor T.C., Warren R.M., Sloutsky A., Plikaytis B.B., et al. Independent large scale duplications in multiple M. tuberculosis lineages overlapping the same genomic region. PLoS ONE 2012, 7:e26038.
-
(2012)
PLoS ONE
, vol.7
, pp. e26038
-
-
Weiner, B.1
Gomez, J.2
Victor, T.C.3
Warren, R.M.4
Sloutsky, A.5
Plikaytis, B.B.6
-
119
-
-
0001633794
-
Comparative genomics uncovers large tandem chromosomal duplications in Mycobacterium bovis BCG Pasteur
-
Brosch R., Gordon S.V., Buchrieser C., Pym A.S., Garnier T., Cole S.T. Comparative genomics uncovers large tandem chromosomal duplications in Mycobacterium bovis BCG Pasteur. Yeast 2000, 17:111-123.
-
(2000)
Yeast
, vol.17
, pp. 111-123
-
-
Brosch, R.1
Gordon, S.V.2
Buchrieser, C.3
Pym, A.S.4
Garnier, T.5
Cole, S.T.6
-
120
-
-
34248402030
-
Genome plasticity of BCG and impact on vaccine efficacy
-
Brosch R., Gordon S.V., Garnier T., Eiglmeier K., Frigui W., Valenti P., et al. Genome plasticity of BCG and impact on vaccine efficacy. Proc Natl Acad Sci USA 2007, 104:5596-5601.
-
(2007)
Proc Natl Acad Sci USA
, vol.104
, pp. 5596-5601
-
-
Brosch, R.1
Gordon, S.V.2
Garnier, T.3
Eiglmeier, K.4
Frigui, W.5
Valenti, P.6
-
121
-
-
80052741576
-
Pseudo-Beijing: evidence for convergent evolution in the direct repeat region of Mycobacterium tuberculosis
-
Fenner L., Malla B., Ninet B., Dubuis O., Stucki D., Borrell S., et al. Pseudo-Beijing: evidence for convergent evolution in the direct repeat region of Mycobacterium tuberculosis. PLoS ONE 2011, 6:e24737.
-
(2011)
PLoS ONE
, vol.6
, pp. e24737
-
-
Fenner, L.1
Malla, B.2
Ninet, B.3
Dubuis, O.4
Stucki, D.5
Borrell, S.6
-
122
-
-
0025995836
-
Insulin-IGF2 region on chromosome 11p encodes a gene implicated in HLA-DR4-dependent diabetes susceptibility
-
Julier C., Hyer R.N., Davies J., Merlin F., Soularue P., Briant L., et al. Insulin-IGF2 region on chromosome 11p encodes a gene implicated in HLA-DR4-dependent diabetes susceptibility. Nature 1991, 354:155-159.
-
(1991)
Nature
, vol.354
, pp. 155-159
-
-
Julier, C.1
Hyer, R.N.2
Davies, J.3
Merlin, F.4
Soularue, P.5
Briant, L.6
-
123
-
-
21644473811
-
Strain-specific differences in Neisseria gonorrhoeae associated with the phase variable gene repertoire
-
Jordan P., Snyder L., Saunders N. Strain-specific differences in Neisseria gonorrhoeae associated with the phase variable gene repertoire. BMC Microbiol 2005, 5:21.
-
(2005)
BMC Microbiol
, vol.5
, pp. 21
-
-
Jordan, P.1
Snyder, L.2
Saunders, N.3
-
124
-
-
84900400306
-
Phase variation mediates reductions in expression of surface proteins during persistent meningococcal carriage
-
Alamro M., Bidmos F.A., Chan H., Oldfield N.J., Newton E., Bai X., et al. Phase variation mediates reductions in expression of surface proteins during persistent meningococcal carriage. Infect Immun 2014, 82:2472-2484.
-
(2014)
Infect Immun
, vol.82
, pp. 2472-2484
-
-
Alamro, M.1
Bidmos, F.A.2
Chan, H.3
Oldfield, N.J.4
Newton, E.5
Bai, X.6
-
125
-
-
67651165639
-
Characterization of alpha-isopropylmalate synthases containing different copy numbers of tandem repeats in Mycobacterium tuberculosis
-
Yindeeyoungyeon W., Likitvivatanavong S., Palittapongarnpim P. Characterization of alpha-isopropylmalate synthases containing different copy numbers of tandem repeats in Mycobacterium tuberculosis. BMC Microbiol 2009, 9:122.
-
(2009)
BMC Microbiol
, vol.9
, pp. 122
-
-
Yindeeyoungyeon, W.1
Likitvivatanavong, S.2
Palittapongarnpim, P.3
-
126
-
-
67650766477
-
Characterization of the major formamidopyrimidine-DNA glycosylase homolog in Mycobacterium tuberculosis and its linkage to variable tandem repeats
-
Olsen I., Balasingham S.V., Davidsen T., Debebe E., Rodland E.A., van Soolingen D., et al. Characterization of the major formamidopyrimidine-DNA glycosylase homolog in Mycobacterium tuberculosis and its linkage to variable tandem repeats. FEMS Immunol Med Microbiol 2009, 56:151-161.
-
(2009)
FEMS Immunol Med Microbiol
, vol.56
, pp. 151-161
-
-
Olsen, I.1
Balasingham, S.V.2
Davidsen, T.3
Debebe, E.4
Rodland, E.A.5
van Soolingen, D.6
-
127
-
-
77957202690
-
Variable number of tandem repeat sequences act as regulatory elements in Mycobacterium tuberculosis
-
Tantivitayakul P., Panapruksachat S., Billamas P., Palittapongarnpim P. Variable number of tandem repeat sequences act as regulatory elements in Mycobacterium tuberculosis. Tuberculosis 2010, 90:311-318.
-
(2010)
Tuberculosis
, vol.90
, pp. 311-318
-
-
Tantivitayakul, P.1
Panapruksachat, S.2
Billamas, P.3
Palittapongarnpim, P.4
-
128
-
-
84887607972
-
Differences in gene expression between clonal variants of Mycobacterium tuberculosis emerging as a result of microevolution
-
Perez-Lago L., Navarro Y., Herranz M., Bouza E., Garcia-De-Viedma D. Differences in gene expression between clonal variants of Mycobacterium tuberculosis emerging as a result of microevolution. Int J Med Microbiol 2013, 303:674-677.
-
(2013)
Int J Med Microbiol
, vol.303
, pp. 674-677
-
-
Perez-Lago, L.1
Navarro, Y.2
Herranz, M.3
Bouza, E.4
Garcia-De-Viedma, D.5
-
129
-
-
0347723832
-
IS6110 mediates increased transcription of the phoP virulence gene in a multidrug-resistant clinical isolate responsible for tuberculosis outbreaks
-
Soto C.Y., Menendez M.C., Perez E., Samper S., Gomez A.B., Garcia M.J., et al. IS6110 mediates increased transcription of the phoP virulence gene in a multidrug-resistant clinical isolate responsible for tuberculosis outbreaks. J Clin Microbiol 2004, 42:212-219.
-
(2004)
J Clin Microbiol
, vol.42
, pp. 212-219
-
-
Soto, C.Y.1
Menendez, M.C.2
Perez, E.3
Samper, S.4
Gomez, A.B.5
Garcia, M.J.6
-
130
-
-
3142706519
-
IS6110 functions as a mobile, monocyte-activated promoter in Mycobacterium tuberculosis
-
Safi H., Barnes P.F., Lakey D.L., Shams H., Samten B., Vankayalapati R., et al. IS6110 functions as a mobile, monocyte-activated promoter in Mycobacterium tuberculosis. Mol Microbiol 2004, 52:999-1012.
-
(2004)
Mol Microbiol
, vol.52
, pp. 999-1012
-
-
Safi, H.1
Barnes, P.F.2
Lakey, D.L.3
Shams, H.4
Samten, B.5
Vankayalapati, R.6
-
131
-
-
79952484880
-
Deciphering the role of IS6110 in a highly transmissible Mycobacterium tuberculosis Beijing strain, GC1237
-
Alonso H., Aguilo J.I., Samper S.A., Caminero J.A., Campos-Herrero M.a.I., Gicquel B., et al. Deciphering the role of IS6110 in a highly transmissible Mycobacterium tuberculosis Beijing strain, GC1237. Tuberculosis 2011, 91:117-126.
-
(2011)
Tuberculosis
, vol.91
, pp. 117-126
-
-
Alonso, H.1
Aguilo, J.I.2
Samper, S.A.3
Caminero, J.A.4
Campos-Herrero, M.5
Gicquel, B.6
-
132
-
-
84886577082
-
Global study of IS6110 in a successful Mycobacterium tuberculosis strain: clues for deciphering its behavior and for its rapid detection
-
Millan-Lou M.I., Lopez-Calleja A.I., Colmenarejo C., Lezcano M.A., Vitoria M.A., Del Portillo P., et al. Global study of IS6110 in a successful Mycobacterium tuberculosis strain: clues for deciphering its behavior and for its rapid detection. J Clin Microbiol 2013, 51:3631-3637.
-
(2013)
J Clin Microbiol
, vol.51
, pp. 3631-3637
-
-
Millan-Lou, M.I.1
Lopez-Calleja, A.I.2
Colmenarejo, C.3
Lezcano, M.A.4
Vitoria, M.A.5
Del Portillo, P.6
-
133
-
-
0036642396
-
Genomic deletions suggest a phylogeny for the Mycobacterium tuberculosis complex
-
Mostowy S., Cousins D., Brinkman J., Aranaz A., Behr M. Genomic deletions suggest a phylogeny for the Mycobacterium tuberculosis complex. J Infect Dis 2002, 186:74-80.
-
(2002)
J Infect Dis
, vol.186
, pp. 74-80
-
-
Mostowy, S.1
Cousins, D.2
Brinkman, J.3
Aranaz, A.4
Behr, M.5
-
134
-
-
0028090438
-
Strain variation in the katG region of Mycobacterium tuberculosis
-
Zhang Y., Young D. Strain variation in the katG region of Mycobacterium tuberculosis. Mol Microbiol 1994, 14:301-308.
-
(1994)
Mol Microbiol
, vol.14
, pp. 301-308
-
-
Zhang, Y.1
Young, D.2
-
135
-
-
0028930320
-
Molecular mechanisms of isoniazid resistance in Mycobacterium tuberculosis and Mycobacterium bovis
-
Rouse D.A., Morris S.L. Molecular mechanisms of isoniazid resistance in Mycobacterium tuberculosis and Mycobacterium bovis. Infect Immun 1995, 63:1427-1433.
-
(1995)
Infect Immun
, vol.63
, pp. 1427-1433
-
-
Rouse, D.A.1
Morris, S.L.2
-
136
-
-
0037064003
-
Role of the pks15/1 gene in the biosynthesis of phenolglycolipids in the Mycobacterium tuberculosis complex
-
Constant P., Perez E., Malaga W., Laneelle M.A., Saurel O., Daffe M., et al. Role of the pks15/1 gene in the biosynthesis of phenolglycolipids in the Mycobacterium tuberculosis complex. J Biol Chem 2002, 277:38148-38158.
-
(2002)
J Biol Chem
, vol.277
, pp. 38148-38158
-
-
Constant, P.1
Perez, E.2
Malaga, W.3
Laneelle, M.A.4
Saurel, O.5
Daffe, M.6
-
137
-
-
46449110348
-
The phenolic glycolipid of Mycobacterium tuberculosis differentially modulates the early host cytokine response but does not in itself confer hypervirulence
-
Sinsimer D., Huet G., Manca C., Tsenova L., Koo M.S., Kurepina N., et al. The phenolic glycolipid of Mycobacterium tuberculosis differentially modulates the early host cytokine response but does not in itself confer hypervirulence. Infect Immun 2008, 76:3027-3036.
-
(2008)
Infect Immun
, vol.76
, pp. 3027-3036
-
-
Sinsimer, D.1
Huet, G.2
Manca, C.3
Tsenova, L.4
Koo, M.S.5
Kurepina, N.6
-
138
-
-
4544298326
-
A glycolipid of hypervirulent tuberculosis strains that inhibits the innate immune response
-
Reed M.B., Domenech P., Manca C., Su H., Barczak A.K., Kreiswirth B.N., et al. A glycolipid of hypervirulent tuberculosis strains that inhibits the innate immune response. Nature 2004, 431:84-87.
-
(2004)
Nature
, vol.431
, pp. 84-87
-
-
Reed, M.B.1
Domenech, P.2
Manca, C.3
Su, H.4
Barczak, A.K.5
Kreiswirth, B.N.6
-
139
-
-
84892367843
-
Mycobacteria manipulate macrophage recruitment through coordinated use of membrane lipids
-
Cambier C.J., Takaki K.K., Larson R.P., Hernandez R.E., Tobin D.M., Urdahl K.B., et al. Mycobacteria manipulate macrophage recruitment through coordinated use of membrane lipids. Nature 2014, 505:218-222.
-
(2014)
Nature
, vol.505
, pp. 218-222
-
-
Cambier, C.J.1
Takaki, K.K.2
Larson, R.P.3
Hernandez, R.E.4
Tobin, D.M.5
Urdahl, K.B.6
-
140
-
-
33750302586
-
A deletion defining a common Asian lineage of Mycobacterium tuberculosis associates with immune subversion
-
Newton S.M., Smith R.J., Wilkinson K.A., Nicol M.P., Garton N.J., Staples K.J., et al. A deletion defining a common Asian lineage of Mycobacterium tuberculosis associates with immune subversion. Proc Natl Acad Sci USA 2006, 103:15594-15598.
-
(2006)
Proc Natl Acad Sci USA
, vol.103
, pp. 15594-15598
-
-
Newton, S.M.1
Smith, R.J.2
Wilkinson, K.A.3
Nicol, M.P.4
Garton, N.J.5
Staples, K.J.6
-
141
-
-
30744446024
-
Distribution of insertion- and deletion-associated genetic polymorphisms among four Mycobacterium tuberculosis phospholipase C genes and associations with extrathoracic tuberculosis: a population-based study
-
Kong Y., Cave M.D., Yang D., Zhang L., Marrs C.F., Foxman B., et al. Distribution of insertion- and deletion-associated genetic polymorphisms among four Mycobacterium tuberculosis phospholipase C genes and associations with extrathoracic tuberculosis: a population-based study. J Clin Microbiol 2005, 43:6048-6053.
-
(2005)
J Clin Microbiol
, vol.43
, pp. 6048-6053
-
-
Kong, Y.1
Cave, M.D.2
Yang, D.3
Zhang, L.4
Marrs, C.F.5
Foxman, B.6
-
142
-
-
33646008555
-
Transcriptional control of the mycobacterial embCAB Operon by PknH through a regulatory protein, EmbR, in vivo
-
Sharma K., Gupta M., Pathak M., Gupta N., Koul A., Sarangi S., et al. Transcriptional control of the mycobacterial embCAB Operon by PknH through a regulatory protein, EmbR, in vivo. J Bacteriol 2006, 188:2936-2944.
-
(2006)
J Bacteriol
, vol.188
, pp. 2936-2944
-
-
Sharma, K.1
Gupta, M.2
Pathak, M.3
Gupta, N.4
Koul, A.5
Sarangi, S.6
-
143
-
-
3242876593
-
Mycobacterial lipoarabinomannan and related lipoglycans: from biogenesis to modulation of the immune response
-
Briken V., Porcelli S.A., Besra G.S., Kremer L. Mycobacterial lipoarabinomannan and related lipoglycans: from biogenesis to modulation of the immune response. Mol Microbiol 2004, 53:391-403.
-
(2004)
Mol Microbiol
, vol.53
, pp. 391-403
-
-
Briken, V.1
Porcelli, S.A.2
Besra, G.S.3
Kremer, L.4
-
144
-
-
33847745864
-
Execution of macrophage apoptosis by PE_PGRS33 of Mycobacterium tuberculosis is mediated by Toll-like receptor 2-dependent release of tumor necrosis factor-α
-
Basu S., Pathak S.K., Banerjee A., Pathak S., Bhattacharyya A., Yang Z., et al. Execution of macrophage apoptosis by PE_PGRS33 of Mycobacterium tuberculosis is mediated by Toll-like receptor 2-dependent release of tumor necrosis factor-α. J Biol Chem 2007, 282:1039-1050.
-
(2007)
J Biol Chem
, vol.282
, pp. 1039-1050
-
-
Basu, S.1
Pathak, S.K.2
Banerjee, A.3
Pathak, S.4
Bhattacharyya, A.5
Yang, Z.6
-
145
-
-
34250649240
-
Association of Mycobacterium tuberculosis PE_PGRS33 polymorphism with clinical and epidemiological characteristics
-
Talarico S., Donald Cave M., Foxman B., Marrs C.F., Zhang L., Bates J.H., et al. Association of Mycobacterium tuberculosis PE_PGRS33 polymorphism with clinical and epidemiological characteristics. Tuberculosis 2007, 87:338-346.
-
(2007)
Tuberculosis
, vol.87
, pp. 338-346
-
-
Talarico, S.1
Donald Cave, M.2
Foxman, B.3
Marrs, C.F.4
Zhang, L.5
Bates, J.H.6
-
146
-
-
84858735387
-
Old and new selective pressures on Mycobacterium tuberculosis
-
Brites D., Gagneux S. Old and new selective pressures on Mycobacterium tuberculosis. Infect Genet Evol 2012, 12:678-685.
-
(2012)
Infect Genet Evol
, vol.12
, pp. 678-685
-
-
Brites, D.1
Gagneux, S.2
-
147
-
-
84864357703
-
The immunological life cycle of tuberculosis
-
Ernst J.D. The immunological life cycle of tuberculosis. Nat Rev Immunol 2012, 12:581-591.
-
(2012)
Nat Rev Immunol
, vol.12
, pp. 581-591
-
-
Ernst, J.D.1
-
148
-
-
79955102870
-
The role of IL-10 in immune regulation during M. tuberculosis infection
-
Redford P.S., Murray P.J., O'Garra A. The role of IL-10 in immune regulation during M. tuberculosis infection. Mucosal Immunol 2011, 4:261-270.
-
(2011)
Mucosal Immunol
, vol.4
, pp. 261-270
-
-
Redford, P.S.1
Murray, P.J.2
O'Garra, A.3
-
149
-
-
0035826721
-
Virulence of a Mycobacterium tuberculosis clinical isolate in mice is determined by failure to induce Th1 type immunity and is associated with induction of IFNγ
-
Manca C., Tsenova L., Bergtold A., Freeman S., Tovey M., Musser J.M., et al. Virulence of a Mycobacterium tuberculosis clinical isolate in mice is determined by failure to induce Th1 type immunity and is associated with induction of IFNγ. Proc Natl Acad Sci U S A 2001, 98:5752-5757.
-
(2001)
Proc Natl Acad Sci U S A
, vol.98
, pp. 5752-5757
-
-
Manca, C.1
Tsenova, L.2
Bergtold, A.3
Freeman, S.4
Tovey, M.5
Musser, J.M.6
-
150
-
-
0036839651
-
Differences in rate and variability of intracellular growth of a panel of Mycobacterium tuberculosis clinical isolates within a human monocyte model
-
Li Q., Whalen C.C., Albert J.M., Larkin R., Zukowski L., Cave M.D., et al. Differences in rate and variability of intracellular growth of a panel of Mycobacterium tuberculosis clinical isolates within a human monocyte model. Infect Immun 2002, 70:6489-6493.
-
(2002)
Infect Immun
, vol.70
, pp. 6489-6493
-
-
Li, Q.1
Whalen, C.C.2
Albert, J.M.3
Larkin, R.4
Zukowski, L.5
Cave, M.D.6
-
151
-
-
4544380418
-
Differential monocyte activation underlies strain-specific Mycobacterium tuberculosis pathogenesis
-
Manca C., Reed M.B., Freeman S., Mathema B., Kreiswirth B., Barry C.E., et al. Differential monocyte activation underlies strain-specific Mycobacterium tuberculosis pathogenesis. Infect Immun 2004, 5511-5514.
-
(2004)
Infect Immun
, pp. 5511-5514
-
-
Manca, C.1
Reed, M.B.2
Freeman, S.3
Mathema, B.4
Kreiswirth, B.5
Barry, C.E.6
-
152
-
-
29444432905
-
Hypervirulent M. tuberculosis W/Beijing strains upregulate type I IFNs and increase expression of negative regulators of the Jak-Stat pathway
-
Manca C., Tsenova L., Freeman S., Barczak A.K., Tovey M., Murray P.J., et al. Hypervirulent M. tuberculosis W/Beijing strains upregulate type I IFNs and increase expression of negative regulators of the Jak-Stat pathway. J Interferon Cytokine Res 2005, 694-701.
-
(2005)
J Interferon Cytokine Res
, pp. 694-701
-
-
Manca, C.1
Tsenova, L.2
Freeman, S.3
Barczak, A.K.4
Tovey, M.5
Murray, P.J.6
-
153
-
-
20844439411
-
Virulence of selected Mycobacterium tuberculosis clinical isolates in the rabbit model of meningitis is dependent on phenolic glycolipid produced by the bacilli
-
Tsenova L., Ellison E., Harbacheuski R., Moreira A., Kurepina N., Reed M., et al. Virulence of selected Mycobacterium tuberculosis clinical isolates in the rabbit model of meningitis is dependent on phenolic glycolipid produced by the bacilli. J Infect Dis 2005, 192:98-106.
-
(2005)
J Infect Dis
, vol.192
, pp. 98-106
-
-
Tsenova, L.1
Ellison, E.2
Harbacheuski, R.3
Moreira, A.4
Kurepina, N.5
Reed, M.6
-
154
-
-
20444498713
-
Differential pattern of cytokine expression by macrophages infected in vitro with different Mycobacterium tuberculosis genotypes
-
Chacón-Salinas R., Serafín-López J., Ramos-Payín R., Méndez-Aragón P., Hernández-Pando R., van Soolingen D., et al. Differential pattern of cytokine expression by macrophages infected in vitro with different Mycobacterium tuberculosis genotypes. Clin Exp Immunol 2005, 140:443-449.
-
(2005)
Clin Exp Immunol
, vol.140
, pp. 443-449
-
-
Chacón-Salinas, R.1
Serafín-López, J.2
Ramos-Payín, R.3
Méndez-Aragón, P.4
Hernández-Pando, R.5
van Soolingen, D.6
-
155
-
-
43049181323
-
Mycobacterium tuberculosis lipids regulate cytokines, TLR-2/4 and MHC class II expression in human macrophages
-
Rocha-Ramirez L.M., Estrada-Garcia I., Lopez-Marin L.M., Segura-Salinas E., Mendez-Aragon P., van Soolingen D., et al. Mycobacterium tuberculosis lipids regulate cytokines, TLR-2/4 and MHC class II expression in human macrophages. Tuberculosis 2008, 88:212-220.
-
(2008)
Tuberculosis
, vol.88
, pp. 212-220
-
-
Rocha-Ramirez, L.M.1
Estrada-Garcia, I.2
Lopez-Marin, L.M.3
Segura-Salinas, E.4
Mendez-Aragon, P.5
van Soolingen, D.6
-
156
-
-
84882470985
-
Early innate immunity determines outcome of Mycobacterium tuberculosis pulmonary infection in rabbits
-
Subbian S., Bandyopadhyay N., Tsenova L., O'Brien P., Khetani V., Kushner N., et al. Early innate immunity determines outcome of Mycobacterium tuberculosis pulmonary infection in rabbits. Cell Commun Sign 2013, 11:60.
-
(2013)
Cell Commun Sign
, vol.11
, pp. 60
-
-
Subbian, S.1
Bandyopadhyay, N.2
Tsenova, L.3
O'Brien, P.4
Khetani, V.5
Kushner, N.6
-
157
-
-
79953274965
-
Human macrophage responses to clinical isolates from the Mycobacterium tuberculosis complex discriminate between ancient and modern lineages
-
Portevin D., Gagneux S., Comas I., Young D. Human macrophage responses to clinical isolates from the Mycobacterium tuberculosis complex discriminate between ancient and modern lineages. PLoS Pathog 2011, 7:e1001307.
-
(2011)
PLoS Pathog
, vol.7
, pp. e1001307
-
-
Portevin, D.1
Gagneux, S.2
Comas, I.3
Young, D.4
-
158
-
-
84883349912
-
Clade-specific virulence patterns of Mycobacterium tuberculosis complex strains in human primary macrophages and aerogenically infected mice
-
Reiling N., Homolka S., Walter K., Brandenburg J., Niwinski L., Ernst M., et al. Clade-specific virulence patterns of Mycobacterium tuberculosis complex strains in human primary macrophages and aerogenically infected mice. mBio 2013, 4.
-
(2013)
mBio
, vol.4
-
-
Reiling, N.1
Homolka, S.2
Walter, K.3
Brandenburg, J.4
Niwinski, L.5
Ernst, M.6
-
159
-
-
84899639400
-
The pattern of cytokine production in vitro induced by ancient and modern Beijing Mycobacterium tuberculosis strains
-
Chen Y.Y., Chang J.R., Huang W.F., Hsu S.C., Kuo S.C., Sun J.R., et al. The pattern of cytokine production in vitro induced by ancient and modern Beijing Mycobacterium tuberculosis strains. PLoS ONE 2014, 9:e94296.
-
(2014)
PLoS ONE
, vol.9
, pp. e94296
-
-
Chen, Y.Y.1
Chang, J.R.2
Huang, W.F.3
Hsu, S.C.4
Kuo, S.C.5
Sun, J.R.6
-
160
-
-
84867837921
-
Plasma level of IL-4 differs in patients infected with different modern lineages of M. tuberculosis
-
Mihret A., Bekele Y., Loxton A.G., Aseffa A., Howe R., Walzl G. Plasma level of IL-4 differs in patients infected with different modern lineages of M. tuberculosis. J Trop Med 2012, 518564.
-
(2012)
J Trop Med
, pp. 518564
-
-
Mihret, A.1
Bekele, Y.2
Loxton, A.G.3
Aseffa, A.4
Howe, R.5
Walzl, G.6
-
161
-
-
67349096799
-
Reduced TNF-[alpha] and IFN-[gamma] responses to Central Asian strain 1 and Beijing isolates of Mycobacterium tuberculosis in comparison with H37Rv strain
-
Tanveer M., Hasan Z., Kanji A., Hussain R., Hasan R. Reduced TNF-[alpha] and IFN-[gamma] responses to Central Asian strain 1 and Beijing isolates of Mycobacterium tuberculosis in comparison with H37Rv strain. Trans R Soc Trop Med Hyg 2009, 103:581-587.
-
(2009)
Trans R Soc Trop Med Hyg
, vol.103
, pp. 581-587
-
-
Tanveer, M.1
Hasan, Z.2
Kanji, A.3
Hussain, R.4
Hasan, R.5
-
162
-
-
78149417911
-
Innate immune response to Mycobacterium tuberculosis Beijing and other genotypes
-
Wang C., Peyron P., Mestre O., Kaplan G., van Soolingen D., Gao Q., et al. Innate immune response to Mycobacterium tuberculosis Beijing and other genotypes. PLoS ONE 2010, 5:e13594.
-
(2010)
PLoS ONE
, vol.5
, pp. e13594
-
-
Wang, C.1
Peyron, P.2
Mestre, O.3
Kaplan, G.4
van Soolingen, D.5
Gao, Q.6
-
163
-
-
84884392061
-
Low induction of proinflammatory cytokines parallels evolutionary success of modern strains within the Mycobacterium tuberculosis Beijing genotype
-
van Laarhoven A., Mandemakers J.J., Kleinnijenhuis J., Enaimi M., Lachmandas E., Joosten L.A.B., et al. Low induction of proinflammatory cytokines parallels evolutionary success of modern strains within the Mycobacterium tuberculosis Beijing genotype. Infect Immun 2013, 81:3750-3756.
-
(2013)
Infect Immun
, vol.81
, pp. 3750-3756
-
-
van Laarhoven, A.1
Mandemakers, J.J.2
Kleinnijenhuis, J.3
Enaimi, M.4
Lachmandas, E.5
Joosten, L.A.B.6
-
164
-
-
84879468975
-
Mycobacterium tuberculosis strains are differentially recognized by TLRs with an impact on the immune response
-
Carmona J., Cruz A., Moreira-Teixeira L., Sousa C., Sousa J., Osorio N.S., et al. Mycobacterium tuberculosis strains are differentially recognized by TLRs with an impact on the immune response. PLoS ONE 2013, 8.
-
(2013)
PLoS ONE
, vol.8
-
-
Carmona, J.1
Cruz, A.2
Moreira-Teixeira, L.3
Sousa, C.4
Sousa, J.5
Osorio, N.S.6
-
165
-
-
84884767775
-
Ethnic variation in inflammatory profile in tuberculosis
-
Coussens A.K., Wilkinson R.J., Nikolayevskyy V., Elkington P.T., Hanifa Y., Islam K., et al. Ethnic variation in inflammatory profile in tuberculosis. PLoS Pathog 2013, 9:e1003468.
-
(2013)
PLoS Pathog
, vol.9
, pp. e1003468
-
-
Coussens, A.K.1
Wilkinson, R.J.2
Nikolayevskyy, V.3
Elkington, P.T.4
Hanifa, Y.5
Islam, K.6
-
166
-
-
84902387401
-
Increased level of acute phase reactants in patients infected with modern Mycobacterium tuberculosis genotypes in Mwanza, Tanzania
-
Stavrum R., PrayGod G., Range N., Faurholt-Jepsen D., Jeremiah K., Faurholt-Jepsen M., et al. Increased level of acute phase reactants in patients infected with modern Mycobacterium tuberculosis genotypes in Mwanza, Tanzania. BMC Infect Dis 2014, 14:309.
-
(2014)
BMC Infect Dis
, vol.14
, pp. 309
-
-
Stavrum, R.1
PrayGod, G.2
Range, N.3
Faurholt-Jepsen, D.4
Jeremiah, K.5
Faurholt-Jepsen, M.6
-
167
-
-
51849129336
-
Progression to active tuberculosis, but not transmission, varies by Mycobacterium tuberculosis lineage in The Gambia
-
de Jong B., Hill P., Aiken A., Awine T., Antonio M., Adetifa I., et al. Progression to active tuberculosis, but not transmission, varies by Mycobacterium tuberculosis lineage in The Gambia. J Infect Dis 2008, 198:1037-1043.
-
(2008)
J Infect Dis
, vol.198
, pp. 1037-1043
-
-
de Jong, B.1
Hill, P.2
Aiken, A.3
Awine, T.4
Antonio, M.5
Adetifa, I.6
-
168
-
-
84880664059
-
Differential virulence and disease progression following Mycobacterium tuberculosis complex infection of the common marmoset (Callithrix jacchus)
-
Via L.E., Weiner D.M., Schimel D., Lin P.L., Dayao E., Tankersley S.L., et al. Differential virulence and disease progression following Mycobacterium tuberculosis complex infection of the common marmoset (Callithrix jacchus). Infect Immun 2013, 81:2909-2919.
-
(2013)
Infect Immun
, vol.81
, pp. 2909-2919
-
-
Via, L.E.1
Weiner, D.M.2
Schimel, D.3
Lin, P.L.4
Dayao, E.5
Tankersley, S.L.6
-
169
-
-
0344306546
-
Mycobacterium tuberculosis Beijing genotype and risk for treatment failure and relapse, Vietnam
-
Lan N.T., Lien H.T., Tung L.B., Borgdorff M.W., Kremer K., van Soolingen D. Mycobacterium tuberculosis Beijing genotype and risk for treatment failure and relapse, Vietnam. Emerg Infect Dis 2003, 1633-1635.
-
(2003)
Emerg Infect Dis
, pp. 1633-1635
-
-
Lan, N.T.1
Lien, H.T.2
Tung, L.B.3
Borgdorff, M.W.4
Kremer, K.5
van Soolingen, D.6
-
170
-
-
33244479908
-
Association of Mycobacterium tuberculosis Beijing genotype with tuberculosis relapse in Singapore
-
Sun Y.J., Lee A.S., Wong S.Y., Paton N.I. Association of Mycobacterium tuberculosis Beijing genotype with tuberculosis relapse in Singapore. Epidemiol Infect 2006, 329-332.
-
(2006)
Epidemiol Infect
, pp. 329-332
-
-
Sun, Y.J.1
Lee, A.S.2
Wong, S.Y.3
Paton, N.I.4
-
171
-
-
84876521556
-
Tuberculosis relapse in Vietnam is significantly associated with Mycobacterium tuberculosis Beijing genotype infections
-
Huyen M.N.T., Buu T.N., Tiemersma E., Lan N.T.N., Dung N.H., Kremer K., et al. Tuberculosis relapse in Vietnam is significantly associated with Mycobacterium tuberculosis Beijing genotype infections. J Infect Dis 2013, 207:1516-1524.
-
(2013)
J Infect Dis
, vol.207
, pp. 1516-1524
-
-
Huyen, M.N.T.1
Buu, T.N.2
Tiemersma, E.3
Lan, N.T.N.4
Dung, N.H.5
Kremer, K.6
-
172
-
-
75749108519
-
Mycobacterium tuberculosis Beijing genotype is an independent risk factor for tuberculosis treatment failure in Indonesia
-
Parwati I., Alisjahbana B., Apriani L., Soetikno R., Ottenhoff T., van der Zanden A., et al. Mycobacterium tuberculosis Beijing genotype is an independent risk factor for tuberculosis treatment failure in Indonesia. J Infect Dis 2010, 201:553-557.
-
(2010)
J Infect Dis
, vol.201
, pp. 553-557
-
-
Parwati, I.1
Alisjahbana, B.2
Apriani, L.3
Soetikno, R.4
Ottenhoff, T.5
van der Zanden, A.6
-
173
-
-
0035200368
-
Mycobacterium tuberculosis Beijing genotype strains associated with febrile response to treatment
-
van Crevel R., Nelwan R.H.H., de Lenne W., Veeraragu Y., van der Zanden A.G., Amin Z., et al. Mycobacterium tuberculosis Beijing genotype strains associated with febrile response to treatment. Emerg Infect Dis 2001, 7:880-883.
-
(2001)
Emerg Infect Dis
, vol.7
, pp. 880-883
-
-
van Crevel, R.1
Nelwan, R.H.H.2
de Lenne, W.3
Veeraragu, Y.4
van der Zanden, A.G.5
Amin, Z.6
-
174
-
-
84859891741
-
Lethal combination of Mycobacterium tuberculosis Beijing genotype and human CD209 -336G allele in Russian male population
-
Ogarkov O., Mokrousov I., Sinkov V., Zhdanova S., Antipina S., Savilov E. Lethal combination of Mycobacterium tuberculosis Beijing genotype and human CD209 -336G allele in Russian male population. Infect Genet Evol 2012, 12:732-736.
-
(2012)
Infect Genet Evol
, vol.12
, pp. 732-736
-
-
Ogarkov, O.1
Mokrousov, I.2
Sinkov, V.3
Zhdanova, S.4
Antipina, S.5
Savilov, E.6
-
175
-
-
77956540290
-
Influence of M. tuberculosis lineage variability within a clinical trial for pulmonary tuberculosis
-
Nahid P., Bliven E.E., Kim E.Y., Mac Kenzie W.R., Stout J.E., Diem L., et al. Influence of M. tuberculosis lineage variability within a clinical trial for pulmonary tuberculosis. PLoS ONE 2010, 5:e10753.
-
(2010)
PLoS ONE
, vol.5
, pp. e10753
-
-
Nahid, P.1
Bliven, E.E.2
Kim, E.Y.3
Mac Kenzie, W.R.4
Stout, J.E.5
Diem, L.6
-
176
-
-
84864563638
-
Beijing sublineages of Mycobacterium tuberculosis differ in pathogenicity in the guinea pig
-
Kato-Maeda M., Shanley C.A., Ackart D., Jarlsberg L.G., Shang S., Obregon-Henao A., et al. Beijing sublineages of Mycobacterium tuberculosis differ in pathogenicity in the guinea pig. Clin Vaccine Immunol 2012, 19:1227-1237.
-
(2012)
Clin Vaccine Immunol
, vol.19
, pp. 1227-1237
-
-
Kato-Maeda, M.1
Shanley, C.A.2
Ackart, D.3
Jarlsberg, L.G.4
Shang, S.5
Obregon-Henao, A.6
-
177
-
-
77957194692
-
Mycobacterium tuberculosis strains with the Beijing genotype demonstrate variability in virulence associated with transmission
-
Aguilar D., Hanekom M., Mata D., van Pittius N.C.G., van Helden P.D., Warren R.M., et al. Mycobacterium tuberculosis strains with the Beijing genotype demonstrate variability in virulence associated with transmission. Tuberculosis 2010, 90:319-325.
-
(2010)
Tuberculosis
, vol.90
, pp. 319-325
-
-
Aguilar, D.1
Hanekom, M.2
Mata, D.3
van Pittius, N.C.G.4
van Helden, P.D.5
Warren, R.M.6
-
178
-
-
84874010711
-
Tuberculosis
-
Zumla A., Raviglione M., Hafner R., Fordham Von Reyn C. Tuberculosis. N Engl J Med 2013, 368:745-755.
-
(2013)
N Engl J Med
, vol.368
, pp. 745-755
-
-
Zumla, A.1
Raviglione, M.2
Hafner, R.3
Fordham Von Reyn, C.4
-
179
-
-
33750944979
-
Population-based study of deletions in five different genomic regions of Mycobacterium tuberculosis and possible clinical relevance of the deletions
-
Kong Y., Cave M.D., Zhang L., Foxman B., Marrs C.F., Bates J.H., et al. Population-based study of deletions in five different genomic regions of Mycobacterium tuberculosis and possible clinical relevance of the deletions. J Clin Microbiol 2006, 44:3940-3946.
-
(2006)
J Clin Microbiol
, vol.44
, pp. 3940-3946
-
-
Kong, Y.1
Cave, M.D.2
Zhang, L.3
Foxman, B.4
Marrs, C.F.5
Bates, J.H.6
-
180
-
-
33847044729
-
Association between Mycobacterium tuberculosis Beijing/W lineage strain infection and extrathoracic tuberculosis: insights from epidemiologic and clinical characterization of the three principal genetic groups of m. tuberculosis clinical isolates
-
Kong Y., Cave M.D., Zhang L., Foxman B., Marrs C.F., Bates J.H., et al. Association between Mycobacterium tuberculosis Beijing/W lineage strain infection and extrathoracic tuberculosis: insights from epidemiologic and clinical characterization of the three principal genetic groups of m. tuberculosis clinical isolates. J Clin Microbiol 2007, 45:409-414.
-
(2007)
J Clin Microbiol
, vol.45
, pp. 409-414
-
-
Kong, Y.1
Cave, M.D.2
Zhang, L.3
Foxman, B.4
Marrs, C.F.5
Bates, J.H.6
-
181
-
-
84873731425
-
Ethnicity and mycobacterial lineage as determinants of tuberculosis disease phenotype
-
Pareek M., Evans J., Innes J., Smith G., Hingley-Wilson S., Lougheed K.E., et al. Ethnicity and mycobacterial lineage as determinants of tuberculosis disease phenotype. Thorax 2013, 68:221-229.
-
(2013)
Thorax
, vol.68
, pp. 221-229
-
-
Pareek, M.1
Evans, J.2
Innes, J.3
Smith, G.4
Hingley-Wilson, S.5
Lougheed, K.E.6
-
182
-
-
84555170717
-
Relationship between Mycobacterium tuberculosis phylogenetic lineage and clinical site of tuberculosis
-
Click E.S., Moonan P.K., Winston C.A., Cowan L.S., Oeltmann J.E. Relationship between Mycobacterium tuberculosis phylogenetic lineage and clinical site of tuberculosis. Clin Infect Dis 2012, 54:211-219.
-
(2012)
Clin Infect Dis
, vol.54
, pp. 211-219
-
-
Click, E.S.1
Moonan, P.K.2
Winston, C.A.3
Cowan, L.S.4
Oeltmann, J.E.5
-
183
-
-
42949174158
-
The influence of host and bacterial genotype on the development of disseminated disease with Mycobacterium tuberculosis
-
Caws M., Thwaites G., Dunstan S., Hawn T.R., Thi Ngoc Lan N., Thuong N.T.T., et al. The influence of host and bacterial genotype on the development of disseminated disease with Mycobacterium tuberculosis. PLoS Pathog 2008, 4:e1000034.
-
(2008)
PLoS Pathog
, vol.4
, pp. e1000034
-
-
Caws, M.1
Thwaites, G.2
Dunstan, S.3
Hawn, T.R.4
Thi Ngoc Lan, N.5
Thuong, N.T.T.6
-
184
-
-
3042741433
-
Mycobacterium tuberculosis, Beijing genotype strains not associated with radiological presentation of pulmonary tuberculosis
-
Borgdorff M.W., van Deutekom H., de Haas P.E.W.P., Kremer K., van Soolingen D. Mycobacterium tuberculosis, Beijing genotype strains not associated with radiological presentation of pulmonary tuberculosis. Tuberculosis 2004, 84:337-340.
-
(2004)
Tuberculosis
, vol.84
, pp. 337-340
-
-
Borgdorff, M.W.1
van Deutekom, H.2
de Haas, P.E.W.P.3
Kremer, K.4
van Soolingen, D.5
-
185
-
-
27744454204
-
Distribution of strain families of Mycobacterium tuberculosis causing pulmonary and extrapulmonary disease in hospitalized children in Cape Town, South Africa
-
Nicol M.P., Sola C., February B., Rastogi N., Steyn L., Wilkinson R.J. Distribution of strain families of Mycobacterium tuberculosis causing pulmonary and extrapulmonary disease in hospitalized children in Cape Town, South Africa. J Clin Microbiol 2005, 43:5779-5781.
-
(2005)
J Clin Microbiol
, vol.43
, pp. 5779-5781
-
-
Nicol, M.P.1
Sola, C.2
February, B.3
Rastogi, N.4
Steyn, L.5
Wilkinson, R.J.6
-
186
-
-
84885554175
-
Long-term dominance of Mycobacterium tuberculosis Uganda family in peri-urban Kampala-Uganda is not associated with cavitary disease
-
Wampande E., Mupere E., Debanne S., Asiimwe B., Nsereko M., Mayanja H., et al. Long-term dominance of Mycobacterium tuberculosis Uganda family in peri-urban Kampala-Uganda is not associated with cavitary disease. BMC Infect Dis 2013, 13:484.
-
(2013)
BMC Infect Dis
, vol.13
, pp. 484
-
-
Wampande, E.1
Mupere, E.2
Debanne, S.3
Asiimwe, B.4
Nsereko, M.5
Mayanja, H.6
-
187
-
-
0346218271
-
Use of genetic distance as a measure of ongoing transmission of Mycobacterium tuberculosis
-
van der Spuy G.D., Warren R.M., Richardson M., Beyers N., Behr M.A., van Helden P.D. Use of genetic distance as a measure of ongoing transmission of Mycobacterium tuberculosis. J Clin Microbiol 2003, 41:5640-5644.
-
(2003)
J Clin Microbiol
, vol.41
, pp. 5640-5644
-
-
van der Spuy, G.D.1
Warren, R.M.2
Richardson, M.3
Beyers, N.4
Behr, M.A.5
van Helden, P.D.6
-
188
-
-
84884708048
-
The re-emergence of tuberculosis: what have we learnt from molecular epidemiology
-
Borgdorff M.W., van Soolingen D. The re-emergence of tuberculosis: what have we learnt from molecular epidemiology. Clin Microbiol Infect 2013, 19:889-901.
-
(2013)
Clin Microbiol Infect
, vol.19
, pp. 889-901
-
-
Borgdorff, M.W.1
van Soolingen, D.2
-
189
-
-
84865052945
-
Increased transmission of Mycobacterium tuberculosis Beijing genotype strains associated with resistance to streptomycin: a population-based study
-
Buu T.N., van Soolingen D., Huyen M.N.T., Lan N.T.N., Quy H.T., Tiemersma E.W., et al. Increased transmission of Mycobacterium tuberculosis Beijing genotype strains associated with resistance to streptomycin: a population-based study. PLoS ONE 2012, 7:e42323.
-
(2012)
PLoS ONE
, vol.7
, pp. e42323
-
-
Buu, T.N.1
van Soolingen, D.2
Huyen, M.N.T.3
Lan, N.T.N.4
Quy, H.T.5
Tiemersma, E.W.6
-
190
-
-
84867510931
-
Mycobacterium tuberculosis Beijing strains favor transmission but not drug resistance in china
-
Yang C., Luo T., Sun G., Qiao K., Sun G., DeRiemer K., et al. Mycobacterium tuberculosis Beijing strains favor transmission but not drug resistance in china. Clin Infect Dis 2012, 55:1179-1187.
-
(2012)
Clin Infect Dis
, vol.55
, pp. 1179-1187
-
-
Yang, C.1
Luo, T.2
Sun, G.3
Qiao, K.4
Sun, G.5
DeRiemer, K.6
-
191
-
-
0034082491
-
Mycobacterium tuberculosis Beijing genotype emerging in Vietnam
-
Anh D.D., Borgdorff M.W., Van L.N., Lan N.T., van Gorkom T., Kremer K., et al. Mycobacterium tuberculosis Beijing genotype emerging in Vietnam. Emerg Infect Dis 2000, 302-305.
-
(2000)
Emerg Infect Dis
, pp. 302-305
-
-
Anh, D.D.1
Borgdorff, M.W.2
Van, L.N.3
Lan, N.T.4
van Gorkom, T.5
Kremer, K.6
-
192
-
-
33646591556
-
Beijing/W genotype Mycobacterium tuberculosis and drug resistance
-
European Concerted Action on New Genetic Markers and Techniques for the Epidemiology and Control of Tuberculosis Beijing/W genotype Mycobacterium tuberculosis and drug resistance. Emerg Infect Dis 2006, 736-743.
-
(2006)
Emerg Infect Dis
, pp. 736-743
-
-
-
193
-
-
34248561808
-
A recently evolved sublineage of the Mycobacterium tuberculosis Beijing strain family was associated with an increased ability to spread and cause disease
-
Hanekom M., van der Spuy G.D., Streicher E., Ndabambi S.L., McEvoy C.R.E., Kidd M., et al. A recently evolved sublineage of the Mycobacterium tuberculosis Beijing strain family was associated with an increased ability to spread and cause disease. J Clin Microbiol 2007, 5:1483-1490.
-
(2007)
J Clin Microbiol
, vol.5
, pp. 1483-1490
-
-
Hanekom, M.1
van der Spuy, G.D.2
Streicher, E.3
Ndabambi, S.L.4
McEvoy, C.R.E.5
Kidd, M.6
-
194
-
-
54249117176
-
Recent and rapid emergence of W-Beijing strains of Mycobacterium tuberculosis in Cape Town, South Africa
-
Cowley D., Govender D., February B., Wolfe M., Steyn L., Evans J., et al. Recent and rapid emergence of W-Beijing strains of Mycobacterium tuberculosis in Cape Town, South Africa. Clin Infect Dis 2008, 47:1252-1259.
-
(2008)
Clin Infect Dis
, vol.47
, pp. 1252-1259
-
-
Cowley, D.1
Govender, D.2
February, B.3
Wolfe, M.4
Steyn, L.5
Evans, J.6
-
195
-
-
61849169604
-
Changing Mycobacterium tuberculosis population highlights clade-specific pathogenic characteristics
-
van der Spuy G.D., Kremer K., Ndabambi S.L., Beyers N., Dunbar R., Marais B.J., et al. Changing Mycobacterium tuberculosis population highlights clade-specific pathogenic characteristics. Tuberculosis 2009, 89:120-125.
-
(2009)
Tuberculosis
, vol.89
, pp. 120-125
-
-
van der Spuy, G.D.1
Kremer, K.2
Ndabambi, S.L.3
Beyers, N.4
Dunbar, R.5
Marais, B.J.6
-
196
-
-
84884639041
-
Epidemiological evaluation of spatiotemporal and genotypic clustering of Mycobacterium tuberculosis in Ontario, Canada
-
Tuite A.R., Guthrie J.L., Alexander D.C., Whelan M.S., Lee B., Lam K., et al. Epidemiological evaluation of spatiotemporal and genotypic clustering of Mycobacterium tuberculosis in Ontario, Canada. Int J Tuberc Lung Dis 2013, 1322-1327.
-
(2013)
Int J Tuberc Lung Dis
, pp. 1322-1327
-
-
Tuite, A.R.1
Guthrie, J.L.2
Alexander, D.C.3
Whelan, M.S.4
Lee, B.5
Lam, K.6
-
197
-
-
4444339568
-
The Beijing genotype is emerging among multidrug-resistant Mycobacterium tuberculosis strains from Germany
-
Kubica T., Rusch-Gerdes S., Niemann S. The Beijing genotype is emerging among multidrug-resistant Mycobacterium tuberculosis strains from Germany. Int J Tuberc Lung Dis 2004, 8:1107-1113.
-
(2004)
Int J Tuberc Lung Dis
, vol.8
, pp. 1107-1113
-
-
Kubica, T.1
Rusch-Gerdes, S.2
Niemann, S.3
-
198
-
-
0345601065
-
Mycobacterium tuberculosis Beijing genotype
-
Lillebaek T., Andersen A.B., Dirksen A., Glynn J.R., Kremer K. Mycobacterium tuberculosis Beijing genotype. Emerg Infect Dis 2003, 9:1553-1557.
-
(2003)
Emerg Infect Dis
, vol.9
, pp. 1553-1557
-
-
Lillebaek, T.1
Andersen, A.B.2
Dirksen, A.3
Glynn, J.R.4
Kremer, K.5
-
199
-
-
80052899197
-
Reduced transmissibility of East African Indian strains of Mycobacterium tuberculosis
-
Albanna A.S., Reed M.B., Kotar K.V., Fallow A., McIntosh F.A., Behr M.A., et al. Reduced transmissibility of East African Indian strains of Mycobacterium tuberculosis. PLoS ONE 2011, e25075.
-
(2011)
PLoS ONE
, pp. e25075
-
-
Albanna, A.S.1
Reed, M.B.2
Kotar, K.V.3
Fallow, A.4
McIntosh, F.A.5
Behr, M.A.6
-
200
-
-
66149113568
-
Mycobacterium tuberculosis transmission is not related to household genotype in a setting of high endemicity
-
Marais B.J., Hesseling A.C., Schaaf H.S., Gie R.P., van Helden P.D., Warren R.M. Mycobacterium tuberculosis transmission is not related to household genotype in a setting of high endemicity. J Clin Microbiol 2009, 47:1338-1343.
-
(2009)
J Clin Microbiol
, vol.47
, pp. 1338-1343
-
-
Marais, B.J.1
Hesseling, A.C.2
Schaaf, H.S.3
Gie, R.P.4
van Helden, P.D.5
Warren, R.M.6
-
201
-
-
84886375689
-
Transmission of Mycobacterium tuberculosis Beijing Strains, Alberta, Canada, 1991-2007
-
Langlois-Klassen D., Senthilselvan A., Chui L., Kunimoto D., Saunders L.D., Menzies D., et al. Transmission of Mycobacterium tuberculosis Beijing Strains, Alberta, Canada, 1991-2007. Emerg Infect Dis 2013, 19:701-711.
-
(2013)
Emerg Infect Dis
, vol.19
, pp. 701-711
-
-
Langlois-Klassen, D.1
Senthilselvan, A.2
Chui, L.3
Kunimoto, D.4
Saunders, L.D.5
Menzies, D.6
-
202
-
-
77950891074
-
Differences among sublineages of the East-Asian lineage of Mycobacterium tuberculosis in genotypic clustering
-
Kato-Maeda M., Kim E.Y., Flores L., Jarlsberg L.G., Osmond D., Hopewell P.C. Differences among sublineages of the East-Asian lineage of Mycobacterium tuberculosis in genotypic clustering. Int J Tuberc Lung Dis 2010, 538-544.
-
(2010)
Int J Tuberc Lung Dis
, pp. 538-544
-
-
Kato-Maeda, M.1
Kim, E.Y.2
Flores, L.3
Jarlsberg, L.G.4
Osmond, D.5
Hopewell, P.C.6
-
203
-
-
84878917870
-
Sublineages of Lineage 4 (Euro-American) Mycobacterium tuberculosis differ in genotypic clustering
-
Anderson J., Jarlsberg L.G., Grindsdale J., Osmond D., Kawamura M., Hopewell P.C., et al. Sublineages of Lineage 4 (Euro-American) Mycobacterium tuberculosis differ in genotypic clustering. Int J Tuberc Lung Dis 2013, 885-891.
-
(2013)
Int J Tuberc Lung Dis
, pp. 885-891
-
-
Anderson, J.1
Jarlsberg, L.G.2
Grindsdale, J.3
Osmond, D.4
Kawamura, M.5
Hopewell, P.C.6
-
204
-
-
0037505359
-
Genetic biodiversity of Mycobacterium tuberculosis complex strains from patients with pulmonary tuberculosis in Cameroon
-
Niobe-Eyangoh S.N., Kuaban C., Sorlin P., Cunin P., Thonnon J., Sola C., et al. Genetic biodiversity of Mycobacterium tuberculosis complex strains from patients with pulmonary tuberculosis in Cameroon. J Clin Microbiol 2003, 41:2547-2553.
-
(2003)
J Clin Microbiol
, vol.41
, pp. 2547-2553
-
-
Niobe-Eyangoh, S.N.1
Kuaban, C.2
Sorlin, P.3
Cunin, P.4
Thonnon, J.5
Sola, C.6
-
205
-
-
33947259127
-
First molecular epidemiology study of Mycobacterium tuberculosis in Burkina Faso
-
Godreuil S., Torrea G., Terru D., Chevenet F., Diagbouga S., Supply P., et al. First molecular epidemiology study of Mycobacterium tuberculosis in Burkina Faso. J Clin Microbiol 2007, 45:921-927.
-
(2007)
J Clin Microbiol
, vol.45
, pp. 921-927
-
-
Godreuil, S.1
Torrea, G.2
Terru, D.3
Chevenet, F.4
Diagbouga, S.5
Supply, P.6
-
206
-
-
79955407439
-
The Guinea-Bissau family of Mycobacterium tuberculosis complex revisited
-
Groenheit R., Ghebremichael S., Svensson J., Rabna P., Colombatti R., Riccardi F., et al. The Guinea-Bissau family of Mycobacterium tuberculosis complex revisited. PLoS ONE 2011, 6:e18601.
-
(2011)
PLoS ONE
, vol.6
, pp. e18601
-
-
Groenheit, R.1
Ghebremichael, S.2
Svensson, J.3
Rabna, P.4
Colombatti, R.5
Riccardi, F.6
-
207
-
-
80755132199
-
Mycobacterium tuberculosis Beijing genotype: a template for success
-
Hanekom M., van Pittius N.C.G., McEvoy C., Victor T.C., van Helden P.D., Warren R.M. Mycobacterium tuberculosis Beijing genotype: a template for success. Tuberculosis 2011, 91:510-523.
-
(2011)
Tuberculosis
, vol.91
, pp. 510-523
-
-
Hanekom, M.1
van Pittius, N.C.G.2
McEvoy, C.3
Victor, T.C.4
van Helden, P.D.5
Warren, R.M.6
-
208
-
-
73649107809
-
Infectiousness, reproductive fitness and evolution of drug-resistant Mycobacterium tuberculosis [State of the art]
-
Borrell S., Gagneux S. Infectiousness, reproductive fitness and evolution of drug-resistant Mycobacterium tuberculosis [State of the art]. Int J Tuberc Lung Dis 2009, 13:1456-1466.
-
(2009)
Int J Tuberc Lung Dis
, vol.13
, pp. 1456-1466
-
-
Borrell, S.1
Gagneux, S.2
-
209
-
-
0038496713
-
A marked difference in pathogenesis and immune response induced by different Mycobacterium tuberculosis genotypes
-
Lopez B., Aguilar D., Orozco H., Burguer M., Espitia C., Ritacco V., et al. A marked difference in pathogenesis and immune response induced by different Mycobacterium tuberculosis genotypes. Clin Exp Immunol 2003, 133:30-37.
-
(2003)
Clin Exp Immunol
, vol.133
, pp. 30-37
-
-
Lopez, B.1
Aguilar, D.2
Orozco, H.3
Burguer, M.4
Espitia, C.5
Ritacco, V.6
-
210
-
-
33747403758
-
The emergence of Beijing family genotypes of Mycobacterium tuberculosis and low-level protection by bacille Calmette-Guerin (BCG) vaccines: is there a link?
-
Abebe F., Bjune G. The emergence of Beijing family genotypes of Mycobacterium tuberculosis and low-level protection by bacille Calmette-Guerin (BCG) vaccines: is there a link?. Clin Exp Immunol 2006, 145:389-397.
-
(2006)
Clin Exp Immunol
, vol.145
, pp. 389-397
-
-
Abebe, F.1
Bjune, G.2
-
211
-
-
34250163887
-
BCG vaccination confers poor protection against M. tuberculosis HN878-induced central nervous system disease
-
Tsenova L., Harbacheuski R., Sung N., Ellison E., Fallows D., Kaplan G. BCG vaccination confers poor protection against M. tuberculosis HN878-induced central nervous system disease. Vaccine 2007, 25:5126-5132.
-
(2007)
Vaccine
, vol.25
, pp. 5126-5132
-
-
Tsenova, L.1
Harbacheuski, R.2
Sung, N.3
Ellison, E.4
Fallows, D.5
Kaplan, G.6
-
212
-
-
84856688022
-
Host-pathogen coevolution in human tuberculosis
-
Gagneux S. Host-pathogen coevolution in human tuberculosis. Philos Trans R Soc B: Biol Sci 2012, 367:850-859.
-
(2012)
Philos Trans R Soc B: Biol Sci
, vol.367
, pp. 850-859
-
-
Gagneux, S.1
-
213
-
-
33646227714
-
Mycobacterium tuberculosis complex genetic diversity: mining the fourth international spoligotyping database (SpolDB4) for classification, population genetics and epidemiology
-
Brudey K., Driscoll J., Rigouts L., Prodinger W., Gori A., Al Hajoj S., et al. Mycobacterium tuberculosis complex genetic diversity: mining the fourth international spoligotyping database (SpolDB4) for classification, population genetics and epidemiology. BMC Microbiol 2006, 6:23.
-
(2006)
BMC Microbiol
, vol.6
, pp. 23
-
-
Brudey, K.1
Driscoll, J.2
Rigouts, L.3
Prodinger, W.4
Gori, A.5
Al Hajoj, S.6
-
214
-
-
84876011911
-
HIV infection disrupts the sympatric host-pathogen relationship in human tuberculosis
-
Fenner L., Egger M., Bodmer T., Furrer H., Ballif M., Battegay M., et al. HIV infection disrupts the sympatric host-pathogen relationship in human tuberculosis. PLoS Genet 2013, 9:e1003318.
-
(2013)
PLoS Genet
, vol.9
, pp. e1003318
-
-
Fenner, L.1
Egger, M.2
Bodmer, T.3
Furrer, H.4
Ballif, M.5
Battegay, M.6
-
215
-
-
41149169282
-
ALOX5 variants associated with susceptibility to human pulmonary tuberculosis
-
Herb F., Thye T., Niemann S., Browne E.N.L., Chinbuah M.A., Gyapong J., et al. ALOX5 variants associated with susceptibility to human pulmonary tuberculosis. Hum Mol Genet 2008, 17:1052-1060.
-
(2008)
Hum Mol Genet
, vol.17
, pp. 1052-1060
-
-
Herb, F.1
Thye, T.2
Niemann, S.3
Browne, E.N.L.4
Chinbuah, M.A.5
Gyapong, J.6
-
216
-
-
72849119404
-
Infection with Mycobacterium tuberculosis Beijing genotype strains is associated with polymorphisms in SLC11A1/NRAMP1 in Indonesian patients with tuberculosis
-
van Crevel R., Parwati I., Sahiratmadja E., Marzuki S., Ottenhoff T., Netea M., et al. Infection with Mycobacterium tuberculosis Beijing genotype strains is associated with polymorphisms in SLC11A1/NRAMP1 in Indonesian patients with tuberculosis. J Infect Dis 2009, 200:1671-1674.
-
(2009)
J Infect Dis
, vol.200
, pp. 1671-1674
-
-
van Crevel, R.1
Parwati, I.2
Sahiratmadja, E.3
Marzuki, S.4
Ottenhoff, T.5
Netea, M.6
-
217
-
-
70349672696
-
Autophagy gene variant IRGM -261T contributes to protection from tuberculosis caused by Mycobacterium tuberculosis but not by M. africanum strains
-
Intemann C.D., Thye T., Niemann S., Browne E.N.L., Amanua Chinbuah M., Enimil A., et al. Autophagy gene variant IRGM -261T contributes to protection from tuberculosis caused by Mycobacterium tuberculosis but not by M. africanum strains. PLoS Pathog 2009, 5:e1000577.
-
(2009)
PLoS Pathog
, vol.5
, pp. e1000577
-
-
Intemann, C.D.1
Thye, T.2
Niemann, S.3
Browne, E.N.L.4
Amanua Chinbuah, M.5
Enimil, A.6
-
218
-
-
84887377784
-
A genome-to-genome analysis of associations between human genetic variation, HIV-1 sequence diversity, and viral control
-
Bartha I.C. A genome-to-genome analysis of associations between human genetic variation, HIV-1 sequence diversity, and viral control. eLife Sci 2013, 2.
-
(2013)
eLife Sci
, vol.2
-
-
Bartha, I.C.1
-
219
-
-
84906233556
-
Disrupted human-pathogen co-evolution: a model for disease
-
Kodaman N., Sobota R., Mera R., Schneider B.G., Williams S.M. Disrupted human-pathogen co-evolution: a model for disease. Front Genet 2014, 5.
-
(2014)
Front Genet
, vol.5
-
-
Kodaman, N.1
Sobota, R.2
Mera, R.3
Schneider, B.G.4
Williams, S.M.5
-
220
-
-
84902440699
-
Systems genomics of metabolic phenotypes in wild-type Drosophila melanogaster
-
Reed L.K., Lee K., Zhang Z., Rashid L., Poe A., Hsieh B., et al. Systems genomics of metabolic phenotypes in wild-type Drosophila melanogaster. Genetics 2014.
-
(2014)
Genetics
-
-
Reed, L.K.1
Lee, K.2
Zhang, Z.3
Rashid, L.4
Poe, A.5
Hsieh, B.6
-
221
-
-
79955059280
-
HIV and tuberculosis: a deadly human syndemic
-
Kwan C.K., Ernst J.D. HIV and tuberculosis: a deadly human syndemic. Clin Microbiol Rev 2011, 24:351-376.
-
(2011)
Clin Microbiol Rev
, vol.24
, pp. 351-376
-
-
Kwan, C.K.1
Ernst, J.D.2
-
222
-
-
84919958621
-
Beijing genotype of Mycobacterium tuberculosis significantly associated with HIV and multi-drug resistance in tuberculous meningitis
-
JCM
-
Caws M., Thwaites G., Stepniewska K., Lan N.T.N., Duyen N.T.H., Phuong N.T., et al. Beijing genotype of Mycobacterium tuberculosis significantly associated with HIV and multi-drug resistance in tuberculous meningitis. J Clin Microbiol 2006, JCM-.
-
(2006)
J Clin Microbiol
-
-
Caws, M.1
Thwaites, G.2
Stepniewska, K.3
Lan, N.T.N.4
Duyen, N.T.H.5
Phuong, N.T.6
-
223
-
-
70349417906
-
Molecular epidemiology of Mycobacterium tuberculosis in a South African community with high HIV prevalence
-
Middelkoop K., Bekker L., Mathema B., Shashkina E., Kurepina N., Whitelaw A., et al. Molecular epidemiology of Mycobacterium tuberculosis in a South African community with high HIV prevalence. J Infect Dis 2009, 200:1207-1211.
-
(2009)
J Infect Dis
, vol.200
, pp. 1207-1211
-
-
Middelkoop, K.1
Bekker, L.2
Mathema, B.3
Shashkina, E.4
Kurepina, N.5
Whitelaw, A.6
-
224
-
-
84881358440
-
Mycobacterium tuberculosis Beijing genotype is associated with HIV infection in Mozambique
-
Viegas S.O., Machado A., Groenheit R., Ghebremichael S., Pennhag A., Gudo P.S., et al. Mycobacterium tuberculosis Beijing genotype is associated with HIV infection in Mozambique. PLoS ONE 2013, 8:e71999.
-
(2013)
PLoS ONE
, vol.8
, pp. e71999
-
-
Viegas, S.O.1
Machado, A.2
Groenheit, R.3
Ghebremichael, S.4
Pennhag, A.5
Gudo, P.S.6
-
225
-
-
74549139085
-
Differences between tuberculosis cases infected with Mycobacterium africanum, West African type 2, relative to Euro-American Mycobacterium tuberculosis: an update
-
de Jong B.C., Adetifa I., Walther B., Hill P.C., Antonio M., Ota M., et al. Differences between tuberculosis cases infected with Mycobacterium africanum, West African type 2, relative to Euro-American Mycobacterium tuberculosis: an update. FEMS Immunol Med Microbiol 2010, 58:102-105.
-
(2010)
FEMS Immunol Med Microbiol
, vol.58
, pp. 102-105
-
-
de Jong, B.C.1
Adetifa, I.2
Walther, B.3
Hill, P.C.4
Antonio, M.5
Ota, M.6
-
226
-
-
45449110225
-
Systems biology of persistent infection: tuberculosis as a case study
-
Young D., Stark J., Kirschner D. Systems biology of persistent infection: tuberculosis as a case study. Nat Rev Microbiol 2008, 6:520-528.
-
(2008)
Nat Rev Microbiol
, vol.6
, pp. 520-528
-
-
Young, D.1
Stark, J.2
Kirschner, D.3
-
228
-
-
77955712976
-
TB database 2010: overview and update
-
Galagan J.E., Sisk P., Stolte C., Weiner B., Koehrsen M., Wymore F., et al. TB database 2010: overview and update. Tuberculosis 2010, 90:225-235.
-
(2010)
Tuberculosis
, vol.90
, pp. 225-235
-
-
Galagan, J.E.1
Sisk, P.2
Stolte, C.3
Weiner, B.4
Koehrsen, M.5
Wymore, F.6
-
229
-
-
84891776599
-
PATRIC, the bacterial bioinformatics database and analysis resource
-
Wattam A.R., Abraham D., Dalay O., Disz T.L., Driscoll T., Gabbard J.L., et al. PATRIC, the bacterial bioinformatics database and analysis resource. Nucleic Acids Res 2014, 42:D581-D591.
-
(2014)
Nucleic Acids Res
, vol.42
, pp. D581-D591
-
-
Wattam, A.R.1
Abraham, D.2
Dalay, O.3
Disz, T.L.4
Driscoll, T.5
Gabbard, J.L.6
-
230
-
-
84900826220
-
PolyTB: a genomic variation map for Mycobacterium tuberculosis
-
Coll F., Preston M., Guerra-Assunao J.A., Hill-Cawthorn G., Harris D., Perdigao J., et al. PolyTB: a genomic variation map for Mycobacterium tuberculosis. Tuberculosis 2014, 94:346-354.
-
(2014)
Tuberculosis
, vol.94
, pp. 346-354
-
-
Coll, F.1
Preston, M.2
Guerra-Assunao, J.A.3
Hill-Cawthorn, G.4
Harris, D.5
Perdigao, J.6
-
231
-
-
84899935552
-
Genome-wide Mycobacterium tuberculosis variation (GMTV) database: a new tool for integrating sequence variations and epidemiology
-
Chernyaeva E., Shulgina M., Rotkevich M., Dobrynin P., Simonov S., Shitikov E., et al. Genome-wide Mycobacterium tuberculosis variation (GMTV) database: a new tool for integrating sequence variations and epidemiology. BMC Genom 2014, 15:308.
-
(2014)
BMC Genom
, vol.15
, pp. 308
-
-
Chernyaeva, E.1
Shulgina, M.2
Rotkevich, M.3
Dobrynin, P.4
Simonov, S.5
Shitikov, E.6
-
232
-
-
84903792383
-
Whole genome based Mycobacterium tuberculosis surveillance: a standardized, portable and expandable approach
-
Kohl T.A., Diel R., Harmsen D., Rothgänger J., Meywald Walter K., Merker M., et al. Whole genome based Mycobacterium tuberculosis surveillance: a standardized, portable and expandable approach. J Clin Microbiol 2014.
-
(2014)
J Clin Microbiol
-
-
Kohl, T.A.1
Diel, R.2
Harmsen, D.3
Rothgänger, J.4
Meywald Walter, K.5
Merker, M.6
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