-
1
-
-
0028838407
-
Predominance of a single genotype of Mycobacterium tuberculosis in countries of East Asia
-
van Soolingen D, Qian L, de Haas PE, Douglas JT, Traore H, Portaels F, Qing HZ, Enkhsaikan D, Nymadawa P, van Embden JD. 1995. Predominance of a single genotype of Mycobacterium tuberculosis in countries of East Asia. J. Clin. Microbiol. 33:3234-3238.
-
(1995)
J. Clin. Microbiol.
, vol.33
, pp. 3234-3238
-
-
van Soolingen, D.1
Qian, L.2
de Haas, P.E.3
Douglas, J.T.4
Traore, H.5
Portaels, F.6
Qing, H.Z.7
Enkhsaikan, D.8
Nymadawa, P.9
van Embden, J.D.10
-
2
-
-
58149174244
-
High functional diversity in Mycobacterium tuberculosis driven by genetic drift and human demography
-
doi:10.1371/journal.pbio.0060311
-
Hershberg R, Lipatov M, Small PM, Sheffer H, Niemann S, Homolka S, Roach JC, Kremer K, Petrov DA, Feldman MW, Gagneux S. 2008. High functional diversity in Mycobacterium tuberculosis driven by genetic drift and human demography. PLoS Biol. 6:e311. doi:10.1371/journal.pbio.0060311.
-
(2008)
PLoS Biol.
, vol.6
-
-
Hershberg, R.1
Lipatov, M.2
Small, P.M.3
Sheffer, H.4
Niemann, S.5
Homolka, S.6
Roach, J.C.7
Kremer, K.8
Petrov, D.A.9
Feldman, M.W.10
Gagneux, S.11
-
3
-
-
74549118978
-
Possible underlying mechanisms for successful emergence of the Mycobacterium tuberculosis Beijing genotype strains
-
Parwati I, van Crevel R, van Soolingen D. 2010. Possible underlying mechanisms for successful emergence of the Mycobacterium tuberculosis Beijing genotype strains. Lancet Infect. Dis. 10:103-111.
-
(2010)
Lancet Infect. Dis.
, vol.10
, pp. 103-111
-
-
Parwati, I.1
van Crevel, R.2
van Soolingen, D.3
-
4
-
-
84857332323
-
Relative reproductive fitness of the W-Beijing genotype
-
Cobelens F. 2012. Relative reproductive fitness of the W-Beijing genotype. Int. J. Tuberc. Lung Dis. 16:287.
-
(2012)
Int. J. Tuberc. Lung Dis.
, vol.16
, pp. 287
-
-
Cobelens, F.1
-
5
-
-
0036898991
-
Phylogenetic reconstruction within Mycobacterium tuberculosis Beijing genotype in northwestern Russia
-
Mokrousov I, Narvskaya O, Otten T, Vyazovaya A, Limeschenko E, Steklova L, Vyshnevskyi B. 2002. Phylogenetic reconstruction within Mycobacterium tuberculosis Beijing genotype in northwestern Russia. Res. Microbiol. 153:629-637.
-
(2002)
Res. Microbiol.
, vol.153
, pp. 629-637
-
-
Mokrousov, I.1
Narvskaya, O.2
Otten, T.3
Vyazovaya, A.4
Limeschenko, E.5
Steklova, L.6
Vyshnevskyi, B.7
-
6
-
-
79953103136
-
Mutations in the regulatory network underlie the recent clonal expansion of a dominant subclone of the Mycobacterium tuberculosis Beijing genotype
-
Schürch AC, Kremer K, Warren RM, Hung NV, Zhao Y, Wan K, Boeree MJ, Siezen RJ, Smith NH, van Soolingen D. 2011. Mutations in the regulatory network underlie the recent clonal expansion of a dominant subclone of the Mycobacterium tuberculosis Beijing genotype. Infect. Genet. Evol. 11:587-597.
-
(2011)
Infect. Genet. Evol.
, vol.11
, pp. 587-597
-
-
Schürch, A.C.1
Kremer, K.2
Warren, R.M.3
Hung, N.V.4
Zhao, Y.5
Wan, K.6
Boeree, M.J.7
Siezen, R.J.8
Smith, N.H.9
van Soolingen, D.10
-
7
-
-
63849295730
-
Vaccine-induced immunity circumvented by typical Mycobacterium tuberculosis Beijing strains
-
Kremer K. 2009. Vaccine-induced immunity circumvented by typical Mycobacterium tuberculosis Beijing strains. Emerg. Infect. Dis. 15:335-339.
-
(2009)
Emerg. Infect. Dis.
, vol.15
, pp. 335-339
-
-
Kremer, K.1
-
8
-
-
33747159378
-
Rapid detection of the Mycobacterium tuberculosis Beijing genotype and its ancient and modern sublineages by IS6110-based inverse PCR
-
Mokrousov I, Jiao WW, Valcheva V, Vyazovaya A, Otten T, Ly HM, Lan NN, Limeschenko E, Markova N, Vyshnevskiy B, Shen AD, Narvskaya O. 2006. Rapid detection of the Mycobacterium tuberculosis Beijing genotype and its ancient and modern sublineages by IS6110-based inverse PCR. J. Clin. Microbiol. 44:2851-2856.
-
(2006)
J. Clin. Microbiol.
, vol.44
, pp. 2851-2856
-
-
Mokrousov, I.1
Jiao, W.W.2
Valcheva, V.3
Vyazovaya, A.4
Otten, T.5
Ly, H.M.6
Lan, N.N.7
Limeschenko, E.8
Markova, N.9
Vyshnevskiy, B.10
Shen, A.D.11
Narvskaya, O.12
-
9
-
-
59049106901
-
Molecular epidemiology and evolutionary genetics of Mycobacterium tuberculosis in Taipei
-
doi:10.1186/1471-2334-8-170
-
Dou H-Y, Tseng F-C, Lin C-W, Chang J-R, Sun J-R, Tsai W-S, Lee S-Y, Su I-J, Lu J-J. 2008. Molecular epidemiology and evolutionary genetics of Mycobacterium tuberculosis in Taipei. BMC Infect. Dis. 8:170. doi:10.1186/1471-2334-8-170.
-
(2008)
BMC Infect. Dis.
, vol.8
, pp. 170
-
-
Dou, H.-Y.1
Tseng, F.-C.2
Lin, C.-W.3
Chang, J.-R.4
Sun, J.-R.5
Tsai, W.-S.6
Lee, S.-Y.7
Su, I.-J.8
Lu, J.-J.9
-
10
-
-
42449126680
-
Spread of a low-fitness drug-resistant Mycobacterium tuberculosis strain in a setting of high human immunodeficiency virus prevalence
-
Strauss OJ, Warren RM, Jordaan A, Streicher EM, Hanekom M, Falmer AA, Albert H, Trollip A, Hoosain E, van Helden PD, Victor TC. 2008. Spread of a low-fitness drug-resistant Mycobacterium tuberculosis strain in a setting of high human immunodeficiency virus prevalence. J. Clin. Microbiol. 46:1514-1516.
-
(2008)
J. Clin. Microbiol.
, vol.46
, pp. 1514-1516
-
-
Strauss, O.J.1
Warren, R.M.2
Jordaan, A.3
Streicher, E.M.4
Hanekom, M.5
Falmer, A.A.6
Albert, H.7
Trollip, A.8
Hoosain, E.9
van Helden, P.D.10
Victor, T.C.11
-
11
-
-
77950891074
-
Differences among sublineages of the East-Asian lineage of Mycobacterium tuberculosis in genotypic clustering
-
Kato-Maeda M, Kim EY, Flores L, Jarlsberg LG, Osmond D, Hopewell PC. 2010. Differences among sublineages of the East-Asian lineage of Mycobacterium tuberculosis in genotypic clustering. Int. J. Tuberc. Lung Dis. 14:538-544.
-
(2010)
Int. J. Tuberc. Lung Dis.
, vol.14
, pp. 538-544
-
-
Kato-Maeda, M.1
Kim, E.Y.2
Flores, L.3
Jarlsberg, L.G.4
Osmond, D.5
Hopewell, P.C.6
-
12
-
-
70349641990
-
Population structure dynamics of Mycobacterium tuberculosis Beijing strains during past decades in Japan
-
Iwamoto T, Fujiyama R, Yoshida S, Wada T, Shirai C, Kawakami Y. 2009. Population structure dynamics of Mycobacterium tuberculosis Beijing strains during past decades in Japan. J. Clin. Microbiol. 47:3340-3343.
-
(2009)
J. Clin. Microbiol.
, vol.47
, pp. 3340-3343
-
-
Iwamoto, T.1
Fujiyama, R.2
Yoshida, S.3
Wada, T.4
Shirai, C.5
Kawakami, Y.6
-
13
-
-
67650573155
-
High transmissibility of the modern Beijing Mycobacterium tuberculosis in homeless patients of Japan
-
Wada T, Fujihara S, Shimouchi A, Harada M, Ogura H, Matsumoto S, Hase A. 2009. High transmissibility of the modern Beijing Mycobacterium tuberculosis in homeless patients of Japan. Tuberculosis 89:252-255.
-
(2009)
Tuberculosis
, vol.89
, pp. 252-255
-
-
Wada, T.1
Fujihara, S.2
Shimouchi, A.3
Harada, M.4
Ogura, H.5
Matsumoto, S.6
Hase, A.7
-
14
-
-
78649321465
-
The non-clonality of drug resistance in Beijing-genotype isolates of Mycobacterium tuberculosis from the Western Cape of South Africa
-
doi:10.1186/1471-2164-11-670
-
Ioerger TR, Feng Y, Chen X, Dobos KM, Victor TC, Streicher EM, Warren RM, van Pittius NCG, van Helden PD, Sacchettini JC. 2010. The non-clonality of drug resistance in Beijing-genotype isolates of Mycobacterium tuberculosis from the Western Cape of South Africa. BMC Genomics 11:670. doi:10.1186/1471-2164-11-670.
-
(2010)
BMC Genomics
, vol.11
, pp. 670
-
-
Ioerger, T.R.1
Feng, Y.2
Chen, X.3
Dobos, K.M.4
Victor, T.C.5
Streicher, E.M.6
Warren, R.M.7
van Pittius, N.C.G.8
van Helden, P.D.9
Sacchettini, J.C.10
-
15
-
-
33746912761
-
Evolution of drug resistance in different sublineages of Mycobacterium tuberculosis Beijing genotype
-
Mokrousov I, Jiao W-W, Sun G-Z, Liu J-W, Valcheva V, Li M, Narvskaya O, Shen A-D. 2006. Evolution of drug resistance in different sublineages of Mycobacterium tuberculosis Beijing genotype. Antimicrob. Agents Chemother. 50:2820-2823.
-
(2006)
Antimicrob. Agents Chemother.
, vol.50
, pp. 2820-2823
-
-
Mokrousov, I.1
Jiao, W.-W.2
Sun, G.-Z.3
Liu, J.-W.4
Valcheva, V.5
Li, M.6
Narvskaya, O.7
Shen, A.-D.8
-
16
-
-
34248667928
-
Molecular characteristics of rifampin and isoniazid resistant Mycobacterium tuberculosis strains from Beijing, China
-
Jiao W-W, Mokrousov I, Sun G-Z, Li M, Liu J-W, Narvskaya O, Shen A-D. 2007. Molecular characteristics of rifampin and isoniazid resistant Mycobacterium tuberculosis strains from Beijing, China. Chin. Med. J. 120:814-819.
-
(2007)
Chin. Med. J.
, vol.120
, pp. 814-819
-
-
Jiao, W.-W.1
Mokrousov, I.2
Sun, G.-Z.3
Li, M.4
Liu, J.-W.5
Narvskaya, O.6
Shen, A.-D.7
-
17
-
-
0028306454
-
Multiplex PCR assay specific for the multidrug-resistant strain W of Mycobacterium tuberculosis
-
Plikaytis BB, Marden JL, Crawford JT, Woodley CL, Butler WR, Shinnick TM. 1994. Multiplex PCR assay specific for the multidrug-resistant strain W of Mycobacterium tuberculosis. J. Clin. Microbiol. 32:1542-1546.
-
(1994)
J. Clin. Microbiol.
, vol.32
, pp. 1542-1546
-
-
Plikaytis, B.B.1
Marden, J.L.2
Crawford, J.T.3
Woodley, C.L.4
Butler, W.R.5
Shinnick, T.M.6
-
18
-
-
0035021690
-
J-Express: exploring gene expression data using Java
-
Dysvik B, Jonassen I. 2001. J-Express: exploring gene expression data using Java. Bioinformatics 17:369-370.
-
(2001)
Bioinformatics
, vol.17
, pp. 369-370
-
-
Dysvik, B.1
Jonassen, I.2
-
21
-
-
0036727746
-
Genetics, cytokines and human infectious disease: lessons from weakly pathogenic mycobacteria and salmonellae
-
OttenhoffTHM, Verreck FAW, Lichtenauer-Kaligis EGR, Hoeve MA, Sanal O, van Dissel JT. 2002. Genetics, cytokines and human infectious disease: lessons from weakly pathogenic mycobacteria and salmonellae. Nat. Genet. 32:97-105.
-
(2002)
Nat. Genet.
, vol.32
, pp. 97-105
-
-
Ottenhoff, T.H.M.1
Verreck, F.A.W.2
Lichtenauer-Kaligis, E.G.R.3
Hoeve, M.A.4
Sanal, O.5
van Dissel, J.T.6
-
22
-
-
84865792720
-
New pathways of protective and pathological host defense to mycobacteria
-
OttenhoffTHM. 2012. New pathways of protective and pathological host defense to mycobacteria. Trends Microbiol. 20:419-428.
-
(2012)
Trends Microbiol.
, vol.20
, pp. 419-428
-
-
Ottenhoff, T.H.M.1
-
23
-
-
0035846326
-
Tuberculosis associated with infliximab, a tumor necrosis factor alpha-neutralizing agent
-
Keane J, Gershon S, Wise RP, Mirabile-Levens E, Kasznica J, Schwieterman WD, Siegel JN, Braun MM. 2001. Tuberculosis associated with infliximab, a tumor necrosis factor alpha-neutralizing agent. N. Engl. J. Med. 345:1098-1104.
-
(2001)
N. Engl. J. Med.
, vol.345
, pp. 1098-1104
-
-
Keane, J.1
Gershon, S.2
Wise, R.P.3
Mirabile-Levens, E.4
Kasznica, J.5
Schwieterman, W.D.6
Siegel, J.N.7
Braun, M.M.8
-
24
-
-
48749099161
-
Illuminating the black box of TNF action in tuberculous granulomas
-
Miller EA, Ernst JD. 2008. Illuminating the black box of TNF action in tuberculous granulomas. Immunity 29:175-177.
-
(2008)
Immunity
, vol.29
, pp. 175-177
-
-
Miller, E.A.1
Ernst, J.D.2
-
25
-
-
79955111092
-
Macrophages and control of granulomatous inflammation in tuberculosis
-
Flynn JL, Chan J, Lin PL. 2011. Macrophages and control of granulomatous inflammation in tuberculosis. Mucosal Immunol. 4:271-278.
-
(2011)
Mucosal Immunol.
, vol.4
, pp. 271-278
-
-
Flynn, J.L.1
Chan, J.2
Lin, P.L.3
-
27
-
-
58149083837
-
The role of the granuloma in expansion and dissemination of early tuberculous infection
-
Davis JM, Ramakrishnan L. 2009. The role of the granuloma in expansion and dissemination of early tuberculous infection. Cell 136:37-49.
-
(2009)
Cell
, vol.136
, pp. 37-49
-
-
Davis, J.M.1
Ramakrishnan, L.2
-
28
-
-
78349288102
-
Interleukin-17-producing T-helper cells and related cytokines in human airways exposed to endotoxin
-
Glader P, Smith ME, Malmhäll C, Balder B, Sjöstrand M, Qvarfordt I, Lindén A. 2010. Interleukin-17-producing T-helper cells and related cytokines in human airways exposed to endotoxin. Eur. Respir. J. 36:1155-1164.
-
(2010)
Eur. Respir. J.
, vol.36
, pp. 1155-1164
-
-
Glader, P.1
Smith, M.E.2
Malmhäll, C.3
Balder, B.4
Sjöstrand, M.5
Qvarfordt, I.6
Lindén, A.7
-
29
-
-
79955030498
-
Border patrol: regulation of immunity, inflammation and tissue homeostasis at barrier surfaces by IL-22
-
Sonnenberg GF, Fouser LA, Artis D. 2011. Border patrol: regulation of immunity, inflammation and tissue homeostasis at barrier surfaces by IL-22. Nat. Immunol. 12:383-390.
-
(2011)
Nat. Immunol.
, vol.12
, pp. 383-390
-
-
Sonnenberg, G.F.1
Fouser, L.A.2
Artis, D.3
-
30
-
-
79953274965
-
Human macrophage responses to clinical isolates from the Mycobacterium tuberculosis complex discriminate between ancient and modern lineages
-
doi:10.1371/journal.ppat.1001307
-
Portevin D, Gagneux S, Comas I, Young D. 2011. Human macrophage responses to clinical isolates from the Mycobacterium tuberculosis complex discriminate between ancient and modern lineages. PLoS Pathog. 7:e1001307. doi:10.1371/journal.ppat.1001307.
-
(2011)
PLoS Pathog.
, vol.7
-
-
Portevin, D.1
Gagneux, S.2
Comas, I.3
Young, D.4
-
31
-
-
78049317944
-
Does M.tuberculosis genomic diversity explain disease diversity?
-
Coscolla M, Gagneux S. 2010. Does M. tuberculosis genomic diversity explain disease diversity? Drug Discov. Today Dis. Mech. 7:e43-e59.
-
(2010)
Drug Discov. Today Dis. Mech.
, vol.7
-
-
Coscolla, M.1
Gagneux, S.2
-
32
-
-
34247152126
-
Global phylogeography of Mycobacterium tuberculosis and implications for tuberculosis product development
-
Gagneux S, Small PM. 2007. Global phylogeography of Mycobacterium tuberculosis and implications for tuberculosis product development. Lancet Infect. Dis. 7:328-337.
-
(2007)
Lancet Infect. Dis.
, vol.7
, pp. 328-337
-
-
Gagneux, S.1
Small, P.M.2
-
33
-
-
78149417911
-
Innate immune response to Mycobacterium tuberculosis Beijing and other genotypes
-
doi: 10.1371/journal.pone.0013594
-
Wang C, Peyron P, Mestre O, Kaplan G, van Soolingen D, Gao Q, Gicquel B, Neyrolles O. 2010. Innate immune response to Mycobacterium tuberculosis Beijing and other genotypes. PLoS One 5:e13594. doi: 10.1371/journal.pone.0013594.
-
(2010)
PLoS One
, vol.5
-
-
Wang, C.1
Peyron, P.2
Mestre, O.3
Kaplan, G.4
van Soolingen, D.5
Gao, Q.6
Gicquel, B.7
Neyrolles, O.8
-
34
-
-
20444498713
-
Differential pattern of cytokine expression by macrophages infected in vitro with different Mycobacterium tuberculosis genotypes
-
Chacón-Salinas R, Serafín-López J, Ramos-Payán R, Méndez-Aragón P, Hernandez-Pando R, van Soolingen D, Flores-Romo L, Estrada-Parra S, Estrada-García I. 2005. Differential pattern of cytokine expression by macrophages infected in vitro with different Mycobacterium tuberculosis genotypes. Clin. Exp. Immunol. 140:443-449.
-
(2005)
Clin. Exp. Immunol.
, vol.140
, pp. 443-449
-
-
Chacón-Salinas, R.1
Serafín-López, J.2
Ramos-Payán, R.3
Méndez-Aragón, P.4
Hernandez-Pando, R.5
van Soolingen, D.6
Flores-Romo, L.7
Estrada-Parra, S.8
Estrada-García, I.9
-
35
-
-
0035191662
-
Human macrophage gamma interferon decreases gene expression but not replication of Mycobacterium tuberculosis: analysis of the host-pathogen reciprocal influence on transcription in a comparison of strains H37Rv and CMT97
-
Cappelli G, Volpe P, Sanduzzi A, Sacchi A, Colizzi V, Mariani F. 2001. Human macrophage gamma interferon decreases gene expression but not replication of Mycobacterium tuberculosis: analysis of the host-pathogen reciprocal influence on transcription in a comparison of strains H37Rv and CMT97. Infect. Immun. 69:7262-7270.
-
(2001)
Infect. Immun.
, vol.69
, pp. 7262-7270
-
-
Cappelli, G.1
Volpe, P.2
Sanduzzi, A.3
Sacchi, A.4
Colizzi, V.5
Mariani, F.6
-
36
-
-
80052530215
-
Mycobacterium tuberculosis lineage influences innate immune response and virulence and is associated with distinct cell envelope lipid profiles
-
doi:10.1371/journal.pone.0023870
-
Krishnan N, Malaga W, Constant P, Caws M, Thi Hoang Chau T, Salmons J, Thi Ngoc Lan N, Bang ND, Daffé M, Young DB, Robertson BD, Guilhot C, Thwaites GE. 2011. Mycobacterium tuberculosis lineage influences innate immune response and virulence and is associated with distinct cell envelope lipid profiles. PLoS One 6:e23870. doi:10.1371/journal.pone.0023870.
-
(2011)
PLoS One
, vol.6
-
-
Krishnan, N.1
Malaga, W.2
Constant, P.3
Caws, M.4
Thi Hoang Chau, T.5
Salmons, J.6
Thi Ngoc Lan, N.7
Bang, N.D.8
Daffé, M.9
Young, D.B.10
Robertson, B.D.11
Guilhot, C.12
Thwaites, G.E.13
-
37
-
-
84864563638
-
Beijing sublineages of Mycobacterium tuberculosis differ in pathogenicity in the guinea pig
-
Kato-Maeda M, Shanley CA, Ackart D, Jarlsberg LG, Shang S, Obregon-Henao A, Harton M, Basaraba RJ, Henao-Tamayo M, Barrozo JC, Rose J, Kawamura LM, Coscolla M, Fofanov VY, Koshinsky H, Gagneux S, Hopewell PC, Ordway DJ, Orme IM. 2012. Beijing sublineages of Mycobacterium tuberculosis differ in pathogenicity in the guinea pig. Clin. Vaccine Immunol. 19:1227-1237.
-
(2012)
Clin. Vaccine Immunol.
, vol.19
, pp. 1227-1237
-
-
Kato-Maeda, M.1
Shanley, C.A.2
Ackart, D.3
Jarlsberg, L.G.4
Shang, S.5
Obregon-Henao, A.6
Harton, M.7
Basaraba, R.J.8
Henao-Tamayo, M.9
Barrozo, J.C.10
Rose, J.11
Kawamura, L.M.12
Coscolla, M.13
Fofanov, V.Y.14
Koshinsky, H.15
Gagneux, S.16
Hopewell, P.C.17
Ordway, D.J.18
Orme, I.M.19
-
38
-
-
84867837921
-
Plasma level of IL-4 differs in patients infected with different modern lineages of M
-
doi:10.1155/2012/518564
-
Mihret A, Bekele Y, Loxton AG, Aseffa A, Howe R, Walzl G. 2012. Plasma level of IL-4 differs in patients infected with different modern lineages of M. tuberculosis. J. Trop. Med. 2012:518564. doi:10.1155/2012/518564
-
(2012)
tuberculosis. J. Trop. Med.
, vol.2012
, pp. 518564
-
-
Mihret, A.1
Bekele, Y.2
Loxton, A.G.3
Aseffa, A.4
Howe, R.5
Walzl, G.6
|