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Volumn 28, Issue 22, 2012, Pages 2991-2993

SpolPred: Rapid and accurate prediction of Mycobacterium tuberculosis spoligotypes from short genomic sequences

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIA (MICROORGANISMS); MYCOBACTERIUM TUBERCULOSIS;

EID: 84869471315     PISSN: 13674803     EISSN: 14602059     Source Type: Journal    
DOI: 10.1093/bioinformatics/bts544     Document Type: Article
Times cited : (78)

References (9)
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    • The use of microbead-based spoligotyping for Mycobacterium tuberculosis complex to evaluate the quality of the conventional method: Providing guidelines for Quality Assurance when working on membranes
    • Abadia, E. et al. (2011) The use of microbead-based spoligotyping for Mycobacterium tuberculosis complex to evaluate the quality of the conventional method: providing guidelines for Quality Assurance when working on membranes. BMC Infect. Dis., 11, 110.
    • (2011) BMC Infect. Dis , vol.11 , pp. 110
    • Abadia, E.1
  • 3
    • 84859926842 scopus 로고    scopus 로고
    • SITVITWEB-a publicly available international multimarker database for studying Mycobacterium tuberculosis genetic diversity and molecular epidemiology
    • Demay, C. et al. (2012) SITVITWEB-a publicly available international multimarker database for studying Mycobacterium tuberculosis genetic diversity and molecular epidemiology. Infect. Genet. Evol., 12, 755-766.
    • (2012) Infect. Genet. Evol , vol.12 , pp. 755-766
    • Demay, C.1
  • 4
    • 0034048783 scopus 로고    scopus 로고
    • Detection of a previously unamplified spacer within the DR locus of Mycobacterium tuberculosis: Epidemiological implications
    • Filliol, I. et al. (2000) Detection of a previously unamplified spacer within the DR locus of Mycobacterium tuberculosis: epidemiological implications. J. Clin. Microbiol., 38, 1231-1234. (Pubitemid 30140591)
    • (2000) Journal of Clinical Microbiology , vol.38 , Issue.3 , pp. 1231-1234
    • Filliol, I.1    Sola, C.2    Rastogi, N.3
  • 5
    • 70450187158 scopus 로고    scopus 로고
    • Genome analysis of multi-and extensively-drug-resistanttuberculosis from KwaZulu-Natal, South Africa
    • Ioerger, T.R. et al. (2009) Genome analysis of multi-and extensively-drug-resistanttuberculosis from KwaZulu-Natal, South Africa. PLoS One, 4, e7778.
    • (2009) PLoS One , vol.4
    • Ioerger, T.R.1
  • 6
    • 0030911908 scopus 로고    scopus 로고
    • Simultaneous detection and strain differentiation of Mycobacterium tuberculosis for diagnosis and epidemiology
    • Kamerbeek, J. et al. (1997) Simultaneous detection and strain differentiation of Mycobacterium tuberculosis for diagnosis and epidemiology. J. Clin. Microbiol., 35, 907.
    • (1997) J. Clin. Microbiol , vol.35 , pp. 907
    • Kamerbeek, J.1
  • 7
    • 0037879045 scopus 로고    scopus 로고
    • Molecular methods for Mycobacterium tuberculosis strain typing: A users guide
    • DOI 10.1046/j.1365-2672.2003.01918.x
    • Kanduma, E. et al. (2003) Molecular methods for Mycobacterium tuberculosis strain typing: a users guide. J. Appl. Microbiol., 94, 781-791. (Pubitemid 36555142)
    • (2003) Journal of Applied Microbiology , vol.94 , Issue.5 , pp. 781-791
    • Kanduma, E.1    McHugh, T.D.2    Gillespie, S.H.3
  • 9
    • 43149115851 scopus 로고    scopus 로고
    • Velvet: Algorithms for de novo short read assembly using de Bruijn graphs
    • DOI 10.1101/gr.074492.107
    • Zerbino, D.R. and Birney, E. (2008) Velvet: algorithms for de novo short read assembly using de Bruijn graphs. Genome Res., 18, 821-829. (Pubitemid 351645072)
    • (2008) Genome Research , vol.18 , Issue.5 , pp. 821-829
    • Zerbino, D.R.1    Birney, E.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.