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Volumn 20, Issue 5, 2014, Pages 719-730

Specialized metabolites from the microbiome in health and disease

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIUM ISOLATE; BEHAVIOR; BIOAVAILABILITY; CARCINOGENESIS; CARDIOVASCULAR DISEASE; CYSTIC FIBROSIS; DYSBIOSIS; HOST PATHOGEN INTERACTION; HUMAN; IMMUNITY; INTESTINE FLORA; METABOLISM; METABOLITE; MICROBIAL COLONIZATION; MICROBIOME; NONHUMAN; REVIEW; SIGNAL TRANSDUCTION; SYNTHESIS; BACTERIUM; GASTROINTESTINAL TRACT; GENETICS; HEALTH; METAGENOME; MICROBIOLOGY; MICROFLORA; NEOPLASM;

EID: 84910133100     PISSN: 15504131     EISSN: 19327420     Source Type: Journal    
DOI: 10.1016/j.cmet.2014.10.016     Document Type: Review
Times cited : (438)

References (152)
  • 2
    • 78149291807 scopus 로고    scopus 로고
    • IL-1beta-induced increase in intestinal epithelial tight junction permeability is mediated by MEKK-1 activation of canonical NF-kappaB pathway
    • R. Al-Sadi, D. Ye, H.M. Said, and T.Y. Ma IL-1beta-induced increase in intestinal epithelial tight junction permeability is mediated by MEKK-1 activation of canonical NF-kappaB pathway Am. J. Pathol. 177 2010 2310 2322
    • (2010) Am. J. Pathol. , vol.177 , pp. 2310-2322
    • Al-Sadi, R.1    Ye, D.2    Said, H.M.3    Ma, T.Y.4
  • 4
    • 0037362455 scopus 로고    scopus 로고
    • Ascaris nematodes from pig and human make three antibacterial peptides: Isolation of cecropin P1 and two ASABF peptides
    • M. Andersson, A. Boman, and H.G. Boman Ascaris nematodes from pig and human make three antibacterial peptides: isolation of cecropin P1 and two ASABF peptides Cell. Mol. Life Sci. 60 2003 599 606
    • (2003) Cell. Mol. Life Sci. , vol.60 , pp. 599-606
    • Andersson, M.1    Boman, A.2    Boman, H.G.3
  • 10
  • 11
    • 0029818453 scopus 로고    scopus 로고
    • Influence of orally and rectally administered propionate on cholesterol and glucose metabolism in obese rats
    • A.M. Berggren, E.M. Nyman, I. Lundquist, and I.M. Björck Influence of orally and rectally administered propionate on cholesterol and glucose metabolism in obese rats Br. J. Nutr. 76 1996 287 294
    • (1996) Br. J. Nutr. , vol.76 , pp. 287-294
    • Berggren, A.M.1    Nyman, E.M.2    Lundquist, I.3    Björck, I.M.4
  • 13
    • 0032036480 scopus 로고    scopus 로고
    • Reduced virulence of group A streptococcal Tn916 mutants that do not produce streptolysin S
    • S.D. Betschel, S.M. Borgia, N.L. Barg, D.E. Low, and J.C. De Azavedo Reduced virulence of group A streptococcal Tn916 mutants that do not produce streptolysin S Infect. Immun. 66 1998 1671 1679
    • (1998) Infect. Immun. , vol.66 , pp. 1671-1679
    • Betschel, S.D.1    Borgia, S.M.2    Barg, N.L.3    Low, D.E.4    De Azavedo, J.C.5
  • 14
    • 84855753849 scopus 로고    scopus 로고
    • Salivaricin D, a novel intrinsically trypsin-resistant lantibiotic from Streptococcus salivarius 5M6c isolated from a healthy infant
    • D.J. Birri, D.A. Brede, and I.F. Nes Salivaricin D, a novel intrinsically trypsin-resistant lantibiotic from Streptococcus salivarius 5M6c isolated from a healthy infant Appl. Environ. Microbiol. 78 2012 402 410
    • (2012) Appl. Environ. Microbiol. , vol.78 , pp. 402-410
    • Birri, D.J.1    Brede, D.A.2    Nes, I.F.3
  • 15
    • 84861988021 scopus 로고    scopus 로고
    • Microbiota, disease, and back to health: A metastable journey
    • R. Blumberg, and F. Powrie Microbiota, disease, and back to health: a metastable journey Sci. Transl. Med. 4 2012 rv7
    • (2012) Sci. Transl. Med. , vol.4 , pp. 7
    • Blumberg, R.1    Powrie, F.2
  • 18
    • 84879369738 scopus 로고    scopus 로고
    • Commensal bacteria at the interface of host metabolism and the immune system
    • J.R. Brestoff, and D. Artis Commensal bacteria at the interface of host metabolism and the immune system Nat. Immunol. 14 2013 676 684
    • (2013) Nat. Immunol. , vol.14 , pp. 676-684
    • Brestoff, J.R.1    Artis, D.2
  • 20
    • 84893428147 scopus 로고    scopus 로고
    • Emerging roles of the microbiome in cancer
    • S.J. Bultman Emerging roles of the microbiome in cancer Carcinogenesis 35 2014 249 255
    • (2014) Carcinogenesis , vol.35 , pp. 249-255
    • Bultman, S.J.1
  • 23
    • 76249120134 scopus 로고    scopus 로고
    • Recognition of peptidoglycan from the microbiota by Nod1 enhances systemic innate immunity
    • T.B. Clarke, K.M. Davis, E.S. Lysenko, A.Y. Zhou, Y. Yu, and J.N. Weiser Recognition of peptidoglycan from the microbiota by Nod1 enhances systemic innate immunity Nat. Med. 16 2010 228 231
    • (2010) Nat. Med. , vol.16 , pp. 228-231
    • Clarke, T.B.1    Davis, K.M.2    Lysenko, E.S.3    Zhou, A.Y.4    Yu, Y.5    Weiser, J.N.6
  • 25
    • 33746601080 scopus 로고    scopus 로고
    • Staphyloxanthin plays a role in the fitness of Staphylococcus aureus and its ability to cope with oxidative stress
    • A. Clauditz, A. Resch, K.-P. Wieland, A. Peschel, and F. Götz Staphyloxanthin plays a role in the fitness of Staphylococcus aureus and its ability to cope with oxidative stress Infect. Immun. 74 2006 4950 4953
    • (2006) Infect. Immun. , vol.74 , pp. 4950-4953
    • Clauditz, A.1    Resch, A.2    Wieland, K.-P.3    Peschel, A.4    Götz, F.5
  • 26
    • 84858376593 scopus 로고    scopus 로고
    • The impact of the gut microbiota on human health: An integrative view
    • J.C. Clemente, L.K. Ursell, L.W. Parfrey, and R. Knight The impact of the gut microbiota on human health: an integrative view Cell 148 2012 1258 1270
    • (2012) Cell , vol.148 , pp. 1258-1270
    • Clemente, J.C.1    Ursell, L.K.2    Parfrey, L.W.3    Knight, R.4
  • 27
    • 84896414707 scopus 로고    scopus 로고
    • Bacterial genotoxin colibactin promotes colon tumour growth by inducing a senescence-associated secretory phenotype
    • Published online March 21, 2014
    • A. Cougnoux, G. Dalmasso, R. Martinez, E. Buc, J. Delmas, L. Gibold, P. Sauvanet, C. Darcha, P. Déchelotte, and M. Bonnet Bacterial genotoxin colibactin promotes colon tumour growth by inducing a senescence-associated secretory phenotype Gut 2014 10.1136/gutjnl-2013-305257 Published online March 21, 2014
    • (2014) Gut
    • Cougnoux, A.1    Dalmasso, G.2    Martinez, R.3    Buc, E.4    Delmas, J.5    Gibold, L.6    Sauvanet, P.7    Darcha, C.8    Déchelotte, P.9    Bonnet, M.10
  • 28
    • 0020539371 scopus 로고
    • Fermentation in the human large intestine: Evidence and implications for health
    • J.H. Cummings Fermentation in the human large intestine: evidence and implications for health Lancet 1 1983 1206 1209
    • (1983) Lancet , vol.1 , pp. 1206-1209
    • Cummings, J.H.1
  • 30
    • 84904337496 scopus 로고    scopus 로고
    • The microbiota-gut-brain axis in gastrointestinal disorders: Stressed bugs, stressed brain or both?
    • G. De Palma, S.M. Collins, P. Bercik, and E.F. Verdu The microbiota-gut-brain axis in gastrointestinal disorders: stressed bugs, stressed brain or both? J. Physiol. 592 2014 2989 2997
    • (2014) J. Physiol. , vol.592 , pp. 2989-2997
    • De Palma, G.1    Collins, S.M.2    Bercik, P.3    Verdu, E.F.4
  • 33
    • 84883139076 scopus 로고    scopus 로고
    • The role of short-chain fatty acids in the interplay between diet, gut microbiota, and host energy metabolism
    • G. den Besten, K. van Eunen, A.K. Groen, K. Venema, D.J. Reijngoud, and B.M. Bakker The role of short-chain fatty acids in the interplay between diet, gut microbiota, and host energy metabolism J. Lipid Res. 54 2013 2325 2340
    • (2013) J. Lipid Res. , vol.54 , pp. 2325-2340
    • Den Besten, G.1    Van Eunen, K.2    Groen, A.K.3    Venema, K.4    Reijngoud, D.J.5    Bakker, B.M.6
  • 36
    • 0034951945 scopus 로고    scopus 로고
    • A metabolic node in action: Chorismate-utilizing enzymes in microorganisms
    • F. Dosselaere, and J. Vanderleyden A metabolic node in action: chorismate-utilizing enzymes in microorganisms Crit. Rev. Microbiol. 27 2001 75 131
    • (2001) Crit. Rev. Microbiol. , vol.27 , pp. 75-131
    • Dosselaere, F.1    Vanderleyden, J.2
  • 37
    • 84888398825 scopus 로고    scopus 로고
    • Short-chain fatty acids activate AMP-activated protein kinase and ameliorate ethanol-induced intestinal barrier dysfunction in Caco-2 cell monolayers
    • E.E. Elamin, A.A. Masclee, J. Dekker, H.-J. Pieters, and D.M. Jonkers Short-chain fatty acids activate AMP-activated protein kinase and ameliorate ethanol-induced intestinal barrier dysfunction in Caco-2 cell monolayers J. Nutr. 143 2013 1872 1881
    • (2013) J. Nutr. , vol.143 , pp. 1872-1881
    • Elamin, E.E.1    Masclee, A.A.2    Dekker, J.3    Pieters, H.-J.4    Jonkers, D.M.5
  • 38
    • 0002843579 scopus 로고
    • Occlusion and metabolism of gamma-aminobutyric acid by brain tissue
    • K.A. Elliott, and N.M. Van Gelder Occlusion and metabolism of gamma-aminobutyric acid by brain tissue J. Neurochem. 3 1958 28 40
    • (1958) J. Neurochem. , vol.3 , pp. 28-40
    • Elliott, K.A.1    Van Gelder, N.M.2
  • 39
    • 0023693299 scopus 로고
    • Measurement of gastrointestinal pH profiles in normal ambulant human subjects
    • D.F. Evans, G. Pye, R. Bramley, A.G. Clark, T.J. Dyson, and J.D. Hardcastle Measurement of gastrointestinal pH profiles in normal ambulant human subjects Gut 29 1988 1035 1041
    • (1988) Gut , vol.29 , pp. 1035-1041
    • Evans, D.F.1    Pye, G.2    Bramley, R.3    Clark, A.G.4    Dyson, T.J.5    Hardcastle, J.D.6
  • 40
    • 84903711427 scopus 로고    scopus 로고
    • Adiposity, gut microbiota and faecal short chain fatty acids are linked in adult humans
    • J. Fernandes, W. Su, S. Rahat-Rozenbloom, T.M. Wolever, and E.M. Comelli Adiposity, gut microbiota and faecal short chain fatty acids are linked in adult humans Nutr. Diabetes 4 2014 e121
    • (2014) Nutr. Diabetes , vol.4 , pp. 121
    • Fernandes, J.1    Su, W.2    Rahat-Rozenbloom, S.3    Wolever, T.M.4    Comelli, E.M.5
  • 41
    • 37049006270 scopus 로고    scopus 로고
    • Phase II clinical trial for prevention of delayed diarrhea with cholestyramine/levofloxacin in the second-line treatment with irinotecan biweekly in patients with metastatic colorectal carcinoma
    • D. Flieger, C. Klassert, S. Hainke, R. Keller, R. Kleinschmidt, and W. Fischbach Phase II clinical trial for prevention of delayed diarrhea with cholestyramine/levofloxacin in the second-line treatment with irinotecan biweekly in patients with metastatic colorectal carcinoma Oncology 72 2007 10 16
    • (2007) Oncology , vol.72 , pp. 10-16
    • Flieger, D.1    Klassert, C.2    Hainke, S.3    Keller, R.4    Kleinschmidt, R.5    Fischbach, W.6
  • 42
    • 84868515764 scopus 로고    scopus 로고
    • Genomics-driven discovery of burkholderic acid, a noncanonical, cryptic polyketide from human pathogenic Burkholderia species
    • J. Franke, K. Ishida, and C. Hertweck Genomics-driven discovery of burkholderic acid, a noncanonical, cryptic polyketide from human pathogenic Burkholderia species Angew. Chem. Int. Ed. Engl. 51 2012 11611 11615
    • (2012) Angew. Chem. Int. Ed. Engl. , vol.51 , pp. 11611-11615
    • Franke, J.1    Ishida, K.2    Hertweck, C.3
  • 44
    • 84880172350 scopus 로고    scopus 로고
    • Unique acyl-carnitine profiles are potential biomarkers for acquired mitochondrial disease in autism spectrum disorder
    • R.E. Frye, S. Melnyk, and D.F. Macfabe Unique acyl-carnitine profiles are potential biomarkers for acquired mitochondrial disease in autism spectrum disorder Transcult. Psychiatry 3 2013 e220
    • (2013) Transcult. Psychiatry , vol.3 , pp. 220
    • Frye, R.E.1    Melnyk, S.2    Macfabe, D.F.3
  • 45
    • 34249893108 scopus 로고    scopus 로고
    • The Bacillus subtilis quorum-sensing molecule CSF contributes to intestinal homeostasis via OCTN2, a host cell membrane transporter
    • M. Fujiya, M.W. Musch, Y. Nakagawa, S. Hu, J. Alverdy, Y. Kohgo, O. Schneewind, B. Jabri, and E.B. Chang The Bacillus subtilis quorum-sensing molecule CSF contributes to intestinal homeostasis via OCTN2, a host cell membrane transporter Cell Host Microbe 1 2007 299 308
    • (2007) Cell Host Microbe , vol.1 , pp. 299-308
    • Fujiya, M.1    Musch, M.W.2    Nakagawa, Y.3    Hu, S.4    Alverdy, J.5    Kohgo, Y.6    Schneewind, O.7    Jabri, B.8    Chang, E.B.9
  • 48
    • 84888167311 scopus 로고    scopus 로고
    • Transporters and receptors for short-chain fatty acids as the molecular link between colonic bacteria and the host
    • V. Ganapathy, M. Thangaraju, P.D. Prasad, P.M. Martin, and N. Singh Transporters and receptors for short-chain fatty acids as the molecular link between colonic bacteria and the host Curr. Opin. Pharmacol. 13 2013 869 874
    • (2013) Curr. Opin. Pharmacol. , vol.13 , pp. 869-874
    • Ganapathy, V.1    Thangaraju, M.2    Prasad, P.D.3    Martin, P.M.4    Singh, N.5
  • 53
    • 84856011484 scopus 로고    scopus 로고
    • Metagenomic systems biology of the human gut microbiome reveals topological shifts associated with obesity and inflammatory bowel disease
    • S. Greenblum, P.J. Turnbaugh, and E. Borenstein Metagenomic systems biology of the human gut microbiome reveals topological shifts associated with obesity and inflammatory bowel disease Proc. Natl. Acad. Sci. USA 109 2012 594 599
    • (2012) Proc. Natl. Acad. Sci. USA , vol.109 , pp. 594-599
    • Greenblum, S.1    Turnbaugh, P.J.2    Borenstein, E.3
  • 54
    • 0028859161 scopus 로고
    • Apoptosis in colorectal tumour cells: Induction by the short chain fatty acids butyrate, propionate and acetate and by the bile salt deoxycholate
    • A. Hague, D.J. Elder, D.J. Hicks, and C. Paraskeva Apoptosis in colorectal tumour cells: induction by the short chain fatty acids butyrate, propionate and acetate and by the bile salt deoxycholate Int. J. Cancer 60 1995 400 406
    • (1995) Int. J. Cancer , vol.60 , pp. 400-406
    • Hague, A.1    Elder, D.J.2    Hicks, D.J.3    Paraskeva, C.4
  • 55
    • 84880439384 scopus 로고    scopus 로고
    • Predicting and manipulating cardiac drug inactivation by the human gut bacterium Eggerthella lenta
    • H.J. Haiser, D.B. Gootenberg, K. Chatman, G. Sirasani, E.P. Balskus, and P.J. Turnbaugh Predicting and manipulating cardiac drug inactivation by the human gut bacterium Eggerthella lenta Science 341 2013 295 298
    • (2013) Science , vol.341 , pp. 295-298
    • Haiser, H.J.1    Gootenberg, D.B.2    Chatman, K.3    Sirasani, G.4    Balskus, E.P.5    Turnbaugh, P.J.6
  • 57
    • 80053026224 scopus 로고    scopus 로고
    • Intestinal health functions of colonic microbial metabolites: A review
    • R. Havenaar Intestinal health functions of colonic microbial metabolites: a review Benef. Microbes 2 2011 103 114
    • (2011) Benef. Microbes , vol.2 , pp. 103-114
    • Havenaar, R.1
  • 58
    • 0036252352 scopus 로고    scopus 로고
    • The effects of short-chain fatty acids on human colon cancer cell phenotype are associated with histone hyperacetylation
    • B.F. Hinnebusch, S. Meng, J.T. Wu, S.Y. Archer, and R.A. Hodin The effects of short-chain fatty acids on human colon cancer cell phenotype are associated with histone hyperacetylation J. Nutr. 132 2002 1012 1017
    • (2002) J. Nutr. , vol.132 , pp. 1012-1017
    • Hinnebusch, B.F.1    Meng, S.2    Wu, J.T.3    Archer, S.Y.4    Hodin, R.A.5
  • 59
    • 9644264336 scopus 로고    scopus 로고
    • A Pseudomonas aeruginosa quorum-sensing molecule influences Candida albicans morphology
    • D.A. Hogan, A. Vik, and R. Kolter A Pseudomonas aeruginosa quorum-sensing molecule influences Candida albicans morphology Mol. Microbiol. 54 2004 1212 1223
    • (2004) Mol. Microbiol. , vol.54 , pp. 1212-1223
    • Hogan, D.A.1    Vik, A.2    Kolter, R.3
  • 60
    • 0022970442 scopus 로고
    • Increased intestinal permeability in patients with Crohn's disease and their relatives. A possible etiologic factor
    • D. Hollander, C.M. Vadheim, E. Brettholz, G.M. Petersen, T. Delahunty, and J.I. Rotter Increased intestinal permeability in patients with Crohn's disease and their relatives. A possible etiologic factor Ann. Intern. Med. 105 1986 883 885
    • (1986) Ann. Intern. Med. , vol.105 , pp. 883-885
    • Hollander, D.1    Vadheim, C.M.2    Brettholz, E.3    Petersen, G.M.4    Delahunty, T.5    Rotter, J.I.6
  • 61
    • 0034074390 scopus 로고    scopus 로고
    • Microbially produced acetaldehyde from ethanol may increase the risk of colon cancer via folate deficiency
    • N. Homann, J. Tillonen, and M. Salaspuro Microbially produced acetaldehyde from ethanol may increase the risk of colon cancer via folate deficiency Int. J. Cancer 86 2000 169 173
    • (2000) Int. J. Cancer , vol.86 , pp. 169-173
    • Homann, N.1    Tillonen, J.2    Salaspuro, M.3
  • 62
    • 84861980130 scopus 로고    scopus 로고
    • Interactions between the microbiota and the immune system
    • L.V. Hooper, D.R. Littman, and A.J. Macpherson Interactions between the microbiota and the immune system Science 336 2012 1268 1273
    • (2012) Science , vol.336 , pp. 1268-1273
    • Hooper, L.V.1    Littman, D.R.2    Macpherson, A.J.3
  • 64
    • 33847242242 scopus 로고    scopus 로고
    • Salivaricin A2 and the novel lantibiotic salivaricin B are encoded at adjacent loci on a 190-kilobase transmissible megaplasmid in the oral probiotic strain Streptococcus salivarius K12
    • O. Hyink, P.A. Wescombe, M. Upton, N. Ragland, J.P. Burton, and J.R. Tagg Salivaricin A2 and the novel lantibiotic salivaricin B are encoded at adjacent loci on a 190-kilobase transmissible megaplasmid in the oral probiotic strain Streptococcus salivarius K12 Appl. Environ. Microbiol. 73 2007 1107 1113
    • (2007) Appl. Environ. Microbiol. , vol.73 , pp. 1107-1113
    • Hyink, O.1    Wescombe, P.A.2    Upton, M.3    Ragland, N.4    Burton, J.P.5    Tagg, J.R.6
  • 65
    • 72449182739 scopus 로고    scopus 로고
    • Streptococcus mutans competence-stimulating peptide inhibits Candida albicans hypha formation
    • L.M. Jarosz, D.M. Deng, H.C. van der Mei, W. Crielaard, and B.P. Krom Streptococcus mutans competence-stimulating peptide inhibits Candida albicans hypha formation Eukaryot. Cell 8 2009 1658 1664
    • (2009) Eukaryot. Cell , vol.8 , pp. 1658-1664
    • Jarosz, L.M.1    Deng, D.M.2    Van Der Mei, H.C.3    Crielaard, W.4    Krom, B.P.5
  • 66
    • 78649495633 scopus 로고    scopus 로고
    • Mutanobactin A from the human oral pathogen Streptococcus mutans is a cross-kingdom regulator of the yeast-mycelium transition
    • P.M. Joyner, J. Liu, Z. Zhang, J. Merritt, F. Qi, and R.H. Cichewicz Mutanobactin A from the human oral pathogen Streptococcus mutans is a cross-kingdom regulator of the yeast-mycelium transition Org. Biomol. Chem. 8 2010 5486 5489
    • (2010) Org. Biomol. Chem. , vol.8 , pp. 5486-5489
    • Joyner, P.M.1    Liu, J.2    Zhang, Z.3    Merritt, J.4    Qi, F.5    Cichewicz, R.H.6
  • 67
    • 84880620577 scopus 로고    scopus 로고
    • Short-chain fatty acids activate GPR41 and GPR43 on intestinal epithelial cells to promote inflammatory responses in mice
    • e1-e10
    • M.H. Kim, S.G. Kang, J.H. Park, M. Yanagisawa, and C.H. Kim Short-chain fatty acids activate GPR41 and GPR43 on intestinal epithelial cells to promote inflammatory responses in mice Gastroenterology 145 2013 396 406 e1-e10
    • (2013) Gastroenterology , vol.145 , pp. 396-406
    • Kim, M.H.1    Kang, S.G.2    Park, J.H.3    Yanagisawa, M.4    Kim, C.H.5
  • 69
    • 84855915896 scopus 로고    scopus 로고
    • Comparative metaproteomics and diversity analysis of human intestinal microbiota testifies for its temporal stability and expression of core functions
    • C.A. Kolmeder, M. de Been, J. Nikkilä, I. Ritamo, J. Mättö, L. Valmu, J. Salojärvi, A. Palva, A. Salonen, and W.M. de Vos Comparative metaproteomics and diversity analysis of human intestinal microbiota testifies for its temporal stability and expression of core functions PLoS ONE 7 2012 e29913
    • (2012) PLoS ONE , vol.7 , pp. 29913
    • Kolmeder, C.A.1    De Been, M.2    Nikkilä, J.3    Ritamo, I.4    Mättö, J.5    Valmu, L.6    Salojärvi, J.7    Palva, A.8    Salonen, A.9    De Vos, W.M.10
  • 72
    • 33847265296 scopus 로고    scopus 로고
    • Acidic extracellular pH shifts colorectal cancer cell death from apoptosis to necrosis upon exposure to propionate and acetate, major end-products of the human probiotic propionibacteria
    • A. Lan, D. Lagadic-Gossmann, C. Lemaire, C. Brenner, and G. Jan Acidic extracellular pH shifts colorectal cancer cell death from apoptosis to necrosis upon exposure to propionate and acetate, major end-products of the human probiotic propionibacteria Apoptosis 12 2007 573 591
    • (2007) Apoptosis , vol.12 , pp. 573-591
    • Lan, A.1    Lagadic-Gossmann, D.2    Lemaire, C.3    Brenner, C.4    Jan, G.5
  • 73
    • 84927695621 scopus 로고    scopus 로고
    • Satellite remote sensing data can be used to model marine microbial metabolite turnover
    • Published online July 29, 2014
    • P.E. Larsen, N. Scott, A.F. Post, D. Field, R. Knight, Y. Hamada, and J.A. Gilbert Satellite remote sensing data can be used to model marine microbial metabolite turnover ISME J. 2014 10.1038/ismej.2014.107 Published online July 29, 2014
    • (2014) ISME J.
    • Larsen, P.E.1    Scott, N.2    Post, A.F.3    Field, D.4    Knight, R.5    Hamada, Y.6    Gilbert, J.A.7
  • 76
    • 78650647326 scopus 로고    scopus 로고
    • Has the microbiota played a critical role in the evolution of the adaptive immune system?
    • Y.K. Lee, and S.K. Mazmanian Has the microbiota played a critical role in the evolution of the adaptive immune system? Science 330 2010 1768 1773
    • (2010) Science , vol.330 , pp. 1768-1773
    • Lee, Y.K.1    Mazmanian, S.K.2
  • 79
    • 84899459352 scopus 로고    scopus 로고
    • Metagenomic systems biology and metabolic modeling of the human microbiome: From species composition to community assembly rules
    • R. Levy, and E. Borenstein Metagenomic systems biology and metabolic modeling of the human microbiome: from species composition to community assembly rules Gut Microbes 5 2014 265 270
    • (2014) Gut Microbes , vol.5 , pp. 265-270
    • Levy, R.1    Borenstein, E.2
  • 80
    • 84886727251 scopus 로고    scopus 로고
    • Cometabolism of microbes and host: Implications for drug metabolism and drug-induced toxicity
    • H. Li, and W. Jia Cometabolism of microbes and host: implications for drug metabolism and drug-induced toxicity Clin. Pharmacol. Ther. 94 2013 574 581
    • (2013) Clin. Pharmacol. Ther. , vol.94 , pp. 574-581
    • Li, H.1    Jia, W.2
  • 81
    • 84866676209 scopus 로고    scopus 로고
    • ThioFinder: A web-based tool for the identification of thiopeptide gene clusters in DNA sequences
    • J. Li, X. Qu, X. He, L. Duan, G. Wu, D. Bi, Z. Deng, W. Liu, and H.-Y. Ou ThioFinder: a web-based tool for the identification of thiopeptide gene clusters in DNA sequences PLoS ONE 7 2012 e45878
    • (2012) PLoS ONE , vol.7 , pp. 45878
    • Li, J.1    Qu, X.2    He, X.3    Duan, L.4    Wu, G.5    Bi, D.6    Deng, Z.7    Liu, W.8    Ou, H.-Y.9
  • 82
    • 84878493219 scopus 로고    scopus 로고
    • Mechanistic model of Rothia mucilaginosa adaptation toward persistence in the CF lung, based on a genome reconstructed from metagenomic data
    • Y.W. Lim, R. Schmieder, M. Haynes, M. Furlan, T.D. Matthews, K. Whiteson, S.J. Poole, C.S. Hayes, D.A. Low, and H. Maughan Mechanistic model of Rothia mucilaginosa adaptation toward persistence in the CF lung, based on a genome reconstructed from metagenomic data PLoS ONE 8 2013 e64285
    • (2013) PLoS ONE , vol.8 , pp. 64285
    • Lim, Y.W.1    Schmieder, R.2    Haynes, M.3    Furlan, M.4    Matthews, T.D.5    Whiteson, K.6    Poole, S.J.7    Hayes, C.S.8    Low, D.A.9    Maughan, H.10
  • 83
    • 77950682572 scopus 로고    scopus 로고
    • The changing microbial epidemiology in cystic fibrosis
    • J.J. Lipuma The changing microbial epidemiology in cystic fibrosis Clin. Microbiol. Rev. 23 2010 299 323
    • (2010) Clin. Microbiol. Rev. , vol.23 , pp. 299-323
    • Lipuma, J.J.1
  • 84
    • 22944462082 scopus 로고    scopus 로고
    • Staphylococcus aureus golden pigment impairs neutrophil killing and promotes virulence through its antioxidant activity
    • G.Y. Liu, A. Essex, J.T. Buchanan, V. Datta, H.M. Hoffman, J.F. Bastian, J. Fierer, and V. Nizet Staphylococcus aureus golden pigment impairs neutrophil killing and promotes virulence through its antioxidant activity J. Exp. Med. 202 2005 209 215
    • (2005) J. Exp. Med. , vol.202 , pp. 209-215
    • Liu, G.Y.1    Essex, A.2    Buchanan, J.T.3    Datta, V.4    Hoffman, H.M.5    Bastian, J.F.6    Fierer, J.7    Nizet, V.8
  • 85
    • 84888217565 scopus 로고    scopus 로고
    • Microbial endocrinology in the microbiome-gut-brain axis: How bacterial production and utilization of neurochemicals influence behavior
    • M. Lyte Microbial endocrinology in the microbiome-gut-brain axis: how bacterial production and utilization of neurochemicals influence behavior PLoS Pathog. 9 2013 e1003726
    • (2013) PLoS Pathog. , vol.9 , pp. 1003726
    • Lyte, M.1
  • 86
    • 33845391588 scopus 로고    scopus 로고
    • Neurobiological effects of intraventricular propionic acid in rats: Possible role of short chain fatty acids on the pathogenesis and characteristics of autism spectrum disorders
    • D.F. MacFabe, D.P. Cain, K. Rodriguez-Capote, A.E. Franklin, J.E. Hoffman, F. Boon, A.R. Taylor, M. Kavaliers, and K.-P. Ossenkopp Neurobiological effects of intraventricular propionic acid in rats: possible role of short chain fatty acids on the pathogenesis and characteristics of autism spectrum disorders Behav. Brain Res. 176 2007 149 169
    • (2007) Behav. Brain Res. , vol.176 , pp. 149-169
    • Macfabe, D.F.1    Cain, D.P.2    Rodriguez-Capote, K.3    Franklin, A.E.4    Hoffman, J.E.5    Boon, F.6    Taylor, A.R.7    Kavaliers, M.8    Ossenkopp, K.-P.9
  • 87
    • 84890547453 scopus 로고    scopus 로고
    • The role of glucagon-like peptide-1 impairment in obesity and potential therapeutic implications
    • S. Madsbad The role of glucagon-like peptide-1 impairment in obesity and potential therapeutic implications Diabetes Obes. Metab. 16 2014 9 21
    • (2014) Diabetes Obes. Metab. , vol.16 , pp. 9-21
    • Madsbad, S.1
  • 91
    • 84889681706 scopus 로고    scopus 로고
    • Western diet induces dysbiosis with increased e coli in CEABAC10 mice, alters host barrier function favouring AIEC colonisation
    • M. Martinez-Medina, J. Denizot, N. Dreux, F. Robin, E. Billard, R. Bonnet, A. Darfeuille-Michaud, and N. Barnich Western diet induces dysbiosis with increased E coli in CEABAC10 mice, alters host barrier function favouring AIEC colonisation Gut 63 2014 116 124
    • (2014) Gut , vol.63 , pp. 116-124
    • Martinez-Medina, M.1    Denizot, J.2    Dreux, N.3    Robin, F.4    Billard, E.5    Bonnet, R.6    Darfeuille-Michaud, A.7    Barnich, N.8
  • 93
    • 84872535919 scopus 로고    scopus 로고
    • Xenobiotics shape the physiology and gene expression of the active human gut microbiome
    • C.F. Maurice, H.J. Haiser, and P.J. Turnbaugh Xenobiotics shape the physiology and gene expression of the active human gut microbiome Cell 152 2013 39 50
    • (2013) Cell , vol.152 , pp. 39-50
    • Maurice, C.F.1    Haiser, H.J.2    Turnbaugh, P.J.3
  • 99
    • 79551713705 scopus 로고    scopus 로고
    • Reduced anxiety-like behavior and central neurochemical change in germ-free mice
    • e119
    • K.M. Neufeld, N. Kang, J. Bienenstock, and J.A. Foster Reduced anxiety-like behavior and central neurochemical change in germ-free mice Neurogastroenterol. Motil. 23 2011 255 264 e119
    • (2011) Neurogastroenterol. Motil. , vol.23 , pp. 255-264
    • Neufeld, K.M.1    Kang, N.2    Bienenstock, J.3    Foster, J.A.4
  • 102
    • 84896851032 scopus 로고    scopus 로고
    • Intestinal epithelial cells: Regulators of barrier function and immune homeostasis
    • L.W. Peterson, and D. Artis Intestinal epithelial cells: regulators of barrier function and immune homeostasis Nat. Rev. Immunol. 14 2014 141 153
    • (2014) Nat. Rev. Immunol. , vol.14 , pp. 141-153
    • Peterson, L.W.1    Artis, D.2
  • 103
    • 84901596150 scopus 로고    scopus 로고
    • Extending breath analysis to the cellular level: Current thoughts on the human microbiome and the expression of organic compounds in the human exposome
    • J.D. Pleil, W. Miekisch, M.A. Stiegel, and J. Beauchamp Extending breath analysis to the cellular level: current thoughts on the human microbiome and the expression of organic compounds in the human exposome J. Breath Res. 8 2014 029001
    • (2014) J. Breath Res. , vol.8 , pp. 029001
    • Pleil, J.D.1    Miekisch, W.2    Stiegel, M.A.3    Beauchamp, J.4
  • 104
    • 84875273263 scopus 로고    scopus 로고
    • Horizontal gene transfer and the evolution of bacterial and archaeal population structure
    • M.F. Polz, E.J. Alm, and W.P. Hanage Horizontal gene transfer and the evolution of bacterial and archaeal population structure Trends Genet. 29 2013 170 175
    • (2013) Trends Genet. , vol.29 , pp. 170-175
    • Polz, M.F.1    Alm, E.J.2    Hanage, W.P.3
  • 105
    • 66649089244 scopus 로고    scopus 로고
    • Comparative day/night metatranscriptomic analysis of microbial communities in the North Pacific subtropical gyre
    • R.S. Poretsky, I. Hewson, S. Sun, A.E. Allen, J.P. Zehr, and M.A. Moran Comparative day/night metatranscriptomic analysis of microbial communities in the North Pacific subtropical gyre Environ. Microbiol. 11 2009 1358 1375
    • (2009) Environ. Microbiol. , vol.11 , pp. 1358-1375
    • Poretsky, R.S.1    Hewson, I.2    Sun, S.3    Allen, A.E.4    Zehr, J.P.5    Moran, M.A.6
  • 107
    • 84898874709 scopus 로고    scopus 로고
    • Biogeochemical forces shape the composition and physiology of polymicrobial communities in the cystic fibrosis lung
    • e00956-e13
    • R.A. Quinn, Y.W. Lim, H. Maughan, D. Conrad, F. Rohwer, and K.L. Whiteson Biogeochemical forces shape the composition and physiology of polymicrobial communities in the cystic fibrosis lung MBio 5 2014 e00956-e13
    • (2014) MBio , vol.5
    • Quinn, R.A.1    Lim, Y.W.2    Maughan, H.3    Conrad, D.4    Rohwer, F.5    Whiteson, K.L.6
  • 108
    • 0029328391 scopus 로고
    • Tryptophan biosynthesis and metabolism: Biochemical and molecular genetics
    • E.R. Radwanski, and R.L. Last Tryptophan biosynthesis and metabolism: biochemical and molecular genetics Plant Cell 7 1995 921 934
    • (1995) Plant Cell , vol.7 , pp. 921-934
    • Radwanski, E.R.1    Last, R.L.2
  • 109
    • 84868535694 scopus 로고    scopus 로고
    • Molecular analysis of model gut microbiotas by imaging mass spectrometry and nanodesorption electrospray ionization reveals dietary metabolite transformations
    • C.M. Rath, T. Alexandrov, S.K. Higginbottom, J. Song, M.E. Milla, M.A. Fischbach, J.L. Sonnenburg, and P.C. Dorrestein Molecular analysis of model gut microbiotas by imaging mass spectrometry and nanodesorption electrospray ionization reveals dietary metabolite transformations Anal. Chem. 84 2012 9259 9267
    • (2012) Anal. Chem. , vol.84 , pp. 9259-9267
    • Rath, C.M.1    Alexandrov, T.2    Higginbottom, S.K.3    Song, J.4    Milla, M.E.5    Fischbach, M.A.6    Sonnenburg, J.L.7    Dorrestein, P.C.8
  • 112
    • 79960440908 scopus 로고    scopus 로고
    • Evolutionary considerations of neurotransmitters in microbial, plant and animal cells
    • M. Lyte, P.P. Freestone, Springer New York
    • V.V. Roshchina Evolutionary considerations of neurotransmitters in microbial, plant and animal cells M. Lyte, P.P. Freestone, Microbial endocrinology 2010 Springer New York 17 52
    • (2010) Microbial Endocrinology , pp. 17-52
    • Roshchina, V.V.1
  • 113
    • 67349250428 scopus 로고    scopus 로고
    • The gut microbiota shapes intestinal immune responses during health and disease
    • J.L. Round, and S.K. Mazmanian The gut microbiota shapes intestinal immune responses during health and disease Nat. Rev. Immunol. 9 2009 313 323
    • (2009) Nat. Rev. Immunol. , vol.9 , pp. 313-323
    • Round, J.L.1    Mazmanian, S.K.2
  • 114
    • 79960222400 scopus 로고    scopus 로고
    • Intestinal absorption of water-soluble vitamins in health and disease
    • H.M. Said Intestinal absorption of water-soluble vitamins in health and disease Biochem. J. 437 2011 357 372
    • (2011) Biochem. J. , vol.437 , pp. 357-372
    • Said, H.M.1
  • 115
    • 0029670778 scopus 로고    scopus 로고
    • L-Tryptophan: Biochemical, nutritional and pharmacological aspects
    • E.L. Sainio, K. Pulkki, and S.N. Young L-Tryptophan: Biochemical, nutritional and pharmacological aspects Amino Acids 10 1996 21 47
    • (1996) Amino Acids , vol.10 , pp. 21-47
    • Sainio, E.L.1    Pulkki, K.2    Young, S.N.3
  • 116
    • 0017341656 scopus 로고
    • Microbial ecology of the gastrointestinal tract
    • D.C. Savage Microbial ecology of the gastrointestinal tract Annu. Rev. Microbiol. 31 1977 107 133
    • (1977) Annu. Rev. Microbiol. , vol.31 , pp. 107-133
    • Savage, D.C.1
  • 118
  • 119
    • 84896078883 scopus 로고    scopus 로고
    • Microbes, microbiota, and colon cancer
    • C.L. Sears, and W.S. Garrett Microbes, microbiota, and colon cancer Cell Host Microbe 15 2014 317 328
    • (2014) Cell Host Microbe , vol.15 , pp. 317-328
    • Sears, C.L.1    Garrett, W.S.2
  • 123
    • 36549010103 scopus 로고    scopus 로고
    • Glucose-dependent insulinotropic polypeptide enhances adipocyte development and glucose uptake in part through Akt activation
    • D.H. Song, L. Getty-Kaushik, E. Tseng, J. Simon, B.E. Corkey, and M.M. Wolfe Glucose-dependent insulinotropic polypeptide enhances adipocyte development and glucose uptake in part through Akt activation Gastroenterology 133 2007 1796 1805
    • (2007) Gastroenterology , vol.133 , pp. 1796-1805
    • Song, D.H.1    Getty-Kaushik, L.2    Tseng, E.3    Simon, J.4    Corkey, B.E.5    Wolfe, M.M.6
  • 125
    • 80052400212 scopus 로고    scopus 로고
    • Interleukin-6 (IL-6) regulates claudin-2 expression and tight junction permeability in intestinal epithelium
    • T. Suzuki, N. Yoshinaga, and S. Tanabe Interleukin-6 (IL-6) regulates claudin-2 expression and tight junction permeability in intestinal epithelium J. Biol. Chem. 286 2011 31263 31271
    • (2011) J. Biol. Chem. , vol.286 , pp. 31263-31271
    • Suzuki, T.1    Yoshinaga, N.2    Tanabe, S.3
  • 126
    • 79952626445 scopus 로고    scopus 로고
    • Short-chain fatty acids induced autophagy serves as an adaptive strategy for retarding mitochondria-mediated apoptotic cell death
    • Y. Tang, Y. Chen, H. Jiang, and D. Nie Short-chain fatty acids induced autophagy serves as an adaptive strategy for retarding mitochondria-mediated apoptotic cell death Cell Death Differ. 18 2011 602 618
    • (2011) Cell Death Differ. , vol.18 , pp. 602-618
    • Tang, Y.1    Chen, Y.2    Jiang, H.3    Nie, D.4
  • 129
    • 33645963995 scopus 로고    scopus 로고
    • Claudins and epithelial paracellular transport
    • C.M. Van Itallie, and J.M. Anderson Claudins and epithelial paracellular transport Annu. Rev. Physiol. 68 2006 403 429
    • (2006) Annu. Rev. Physiol. , vol.68 , pp. 403-429
    • Van Itallie, C.M.1    Anderson, J.M.2
  • 130
    • 84901249665 scopus 로고    scopus 로고
    • Metabolite transfer with the fermentation product 2,3-butanediol enhances virulence by Pseudomonas aeruginosa
    • A. Venkataraman, M.A. Rosenbaum, J.J. Werner, S.C. Winans, and L.T. Angenent Metabolite transfer with the fermentation product 2,3-butanediol enhances virulence by Pseudomonas aeruginosa The ISME Journal 8 2014 1210 1220
    • (2014) The ISME Journal , vol.8 , pp. 1210-1220
    • Venkataraman, A.1    Rosenbaum, M.A.2    Werner, J.J.3    Winans, S.C.4    Angenent, L.T.5
  • 131
    • 35348823779 scopus 로고    scopus 로고
    • Burkholderia diversity and versatility: An inventory of the extracellular products
    • L. Vial, M.-C. Groleau, V. Dekimpe, and E. Déziel Burkholderia diversity and versatility: an inventory of the extracellular products J. Microbiol. Biotechnol. 17 2007 1407 1429
    • (2007) J. Microbiol. Biotechnol. , vol.17 , pp. 1407-1429
    • Vial, L.1    Groleau, M.-C.2    Dekimpe, V.3    Déziel, E.4
  • 132
    • 84899787502 scopus 로고    scopus 로고
    • Revealing the bacterial butyrate synthesis pathways by analyzing (meta)genomic data
    • M. Vital, A.C. Howe, and J.M. Tiedje Revealing the bacterial butyrate synthesis pathways by analyzing (meta)genomic data MBio 5 2014 e00889
    • (2014) MBio , vol.5 , pp. 00889
    • Vital, M.1    Howe, A.C.2    Tiedje, J.M.3
  • 133
    • 48649087037 scopus 로고    scopus 로고
    • Inhibition of histone-deacetylase activity by short-chain fatty acids and some polyphenol metabolites formed in the colon
    • M. Waldecker, T. Kautenburger, H. Daumann, C. Busch, and D. Schrenk Inhibition of histone-deacetylase activity by short-chain fatty acids and some polyphenol metabolites formed in the colon J. Nutr. Biochem. 19 2008 587 593
    • (2008) J. Nutr. Biochem. , vol.19 , pp. 587-593
    • Waldecker, M.1    Kautenburger, T.2    Daumann, H.3    Busch, C.4    Schrenk, D.5
  • 137
    • 34548293679 scopus 로고    scopus 로고
    • Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy
    • Q. Wang, G.M. Garrity, J.M. Tiedje, and J.R. Cole Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy Appl. Environ. Microbiol. 73 2007 5261 5267
    • (2007) Appl. Environ. Microbiol. , vol.73 , pp. 5261-5267
    • Wang, Q.1    Garrity, G.M.2    Tiedje, J.M.3    Cole, J.R.4
  • 140
    • 84901248574 scopus 로고    scopus 로고
    • Breath gas metabolites and bacterial metagenomes from cystic fibrosis airways indicate active pH neutral 2,3-butanedione fermentation
    • K.L. Whiteson, S. Meinardi, Y.W. Lim, R. Schmieder, H. Maughan, R. Quinn, D.R. Blake, D. Conrad, and F. Rohwer Breath gas metabolites and bacterial metagenomes from cystic fibrosis airways indicate active pH neutral 2,3-butanedione fermentation ISME J. 8 2014 1247 1258
    • (2014) ISME J. , vol.8 , pp. 1247-1258
    • Whiteson, K.L.1    Meinardi, S.2    Lim, Y.W.3    Schmieder, R.4    Maughan, H.5    Quinn, R.6    Blake, D.R.7    Conrad, D.8    Rohwer, F.9
  • 145
    • 0141454823 scopus 로고    scopus 로고
    • Ancient origin of the tryptophan operon and the dynamics of evolutionary change
    • G. Xie, N.O. Keyhani, C.A. Bonner, and R.A. Jensen Ancient origin of the tryptophan operon and the dynamics of evolutionary change Microbiol. Mol. Biol. Rev. 67 2003 303 342
    • (2003) Microbiol. Mol. Biol. Rev. , vol.67 , pp. 303-342
    • Xie, G.1    Keyhani, N.O.2    Bonner, C.A.3    Jensen, R.A.4
  • 146
    • 84883418106 scopus 로고    scopus 로고
    • Beneficial metabolic effects of a probiotic via butyrate-induced GLP-1 hormone secretion
    • H. Yadav, J.H. Lee, J. Lloyd, P. Walter, and S.G. Rane Beneficial metabolic effects of a probiotic via butyrate-induced GLP-1 hormone secretion J. Biol. Chem. 288 2013 25088 25097
    • (2013) J. Biol. Chem. , vol.288 , pp. 25088-25097
    • Yadav, H.1    Lee, J.H.2    Lloyd, J.3    Walter, P.4    Rane, S.G.5
  • 147
    • 3242668172 scopus 로고    scopus 로고
    • The different roles of tryptophan transfer RNA in regulating trp operon expression in E. Coli versus B. Subtilis
    • C. Yanofsky The different roles of tryptophan transfer RNA in regulating trp operon expression in E. coli versus B. subtilis Trends Genet. 20 2004 367 374
    • (2004) Trends Genet. , vol.20 , pp. 367-374
    • Yanofsky, C.1
  • 149
    • 0028141935 scopus 로고
    • Adult amino acid requirements: The case for a major revision in current recommendations
    • V.R. Young Adult amino acid requirements: the case for a major revision in current recommendations J. Nutr. 124 Suppl 1994 1517S 1523S
    • (1994) J. Nutr. , vol.124 , pp. 1517S-1523S
    • Young, V.R.1
  • 152
    • 84893083800 scopus 로고    scopus 로고
    • Small molecule immunomodulins from cultures of the human microbiome member Lactobacillus plantarum
    • R. Zvanych, N. Lukenda, J.J. Kim, X. Li, E.O. Petrof, W.I. Khan, and N.A. Magarvey Small molecule immunomodulins from cultures of the human microbiome member Lactobacillus plantarum J. Antibiot. 67 2014 85 88
    • (2014) J. Antibiot. , vol.67 , pp. 85-88
    • Zvanych, R.1    Lukenda, N.2    Kim, J.J.3    Li, X.4    Petrof, E.O.5    Khan, W.I.6    Magarvey, N.A.7


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