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Volumn 5, Issue 2, 2014, Pages

Biogeochemical forces shape the composition and physiology of polymicrobial communities in the cystic fibrosis lung

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACID; AMMONIA; FOLIC ACID; IRON; NITRATE; NITRATE REDUCTASE; NITROGEN; THIOCTIC ACID; ZINC;

EID: 84898874709     PISSN: 21612129     EISSN: 21507511     Source Type: Journal    
DOI: 10.1128/mBio.00956-13     Document Type: Article
Times cited : (99)

References (93)
  • 5
    • 0022347919 scopus 로고
    • Cystic fibrosis decreases the apical membrane chloride permeability of monolayers cultured from cells of tracheal epithelium
    • Widdicombe JH, Welsh MJ, Finkbeiner WE. 1985. Cystic fibrosis decreases the apical membrane chloride permeability of monolayers cultured from cells of tracheal epithelium. Proc. Natl. Acad. Sci. USA 82: 6167-6171. http://dx.doi.org/10.1073/pnas.82.18.6167.
    • (1985) Proc. Natl. Acad. Sci. USA , vol.82 , pp. 6167-6171
    • Widdicombe, J.H.1    Welsh, M.J.2    Finkbeiner, W.E.3
  • 6
    • 0020700816 scopus 로고
    • Chloride impermeability in cystic fibrosis
    • Quinton PM. 1983. Chloride impermeability in cystic fibrosis. Nature 301:421-422. http://dx.doi.org/10.1038/301421a0.
    • (1983) Nature , vol.301 , pp. 421-422
    • Quinton, P.M.1
  • 7
    • 48149090717 scopus 로고    scopus 로고
    • Cystic fibrosis: Impaired bicarbonate secretion and mucoviscidosis
    • Quinton PM. 2008. Cystic fibrosis: impaired bicarbonate secretion and mucoviscidosis. Lancet 372:415-417. http://dx.doi.org/10.1016/S0140-6736(08)61162-9.
    • (2008) Lancet , vol.372 , pp. 415-417
    • Quinton, P.M.1
  • 8
    • 0036847496 scopus 로고    scopus 로고
    • Airways in cystic fibrosis are acidified: Detection by exhaled breath condensate
    • Tate S, MacGregor G, Davis M, Innes JA, Greening AP. 2002. Airways in cystic fibrosis are acidified: detection by exhaled breath condensate. Thorax 57:926-929. http://dx.doi.org/10.1136/thorax.57.11.926.
    • (2002) Thorax , vol.57 , pp. 926-929
    • Tate, S.1    McGregor, G.2    Davis, M.3    Innes, J.A.4    Greening, A.P.5
  • 9
    • 69749128729 scopus 로고    scopus 로고
    • Exhaled breath condensate pH and ammonia in cystic fibrosis and response to treatment of acute pulmonary exacerbations
    • Newport S, Amin N, Dozor AJ. 2009. Exhaled breath condensate pH and ammonia in cystic fibrosis and response to treatment of acute pulmonary exacerbations. Pediatr. Pulmonol. 44:866-872.
    • (2009) Pediatr. Pulmonol. , vol.44 , pp. 866-872
    • Newport, S.1    Amin, N.2    Dozor, A.J.3
  • 11
    • 0031687134 scopus 로고    scopus 로고
    • Increased iron and ferritin content of sputum from patients with cystic fibrosis or chronic bronchitis
    • Stites SW, Walters B, O'Brien-Ladner AR, Bailey K, Wesselius LJ. 1998. Increased iron and ferritin content of sputum from patients with cystic fibrosis or chronic bronchitis. Chest 114:814-819. http://dx.doi.org/ 10.1378/chest.114.3.814.
    • (1998) Chest , vol.114 , pp. 814-819
    • Stites, S.W.1    Walters, B.2    O'Brien-Ladner, A.R.3    Bailey, K.4    Wesselius, L.J.5
  • 12
    • 4344675647 scopus 로고    scopus 로고
    • Airway iron and iron-regulatory cytokines in cystic fibrosis
    • Reid DW, Lam QT, Schneider H, Walters EH. 2004. Airway iron and iron-regulatory cytokines in cystic fibrosis. Eur. Respir. J. 24:286-291. http://dx.doi.org/10.1183/09031936.04.00104803.
    • (2004) Eur. Respir. J. , vol.24 , pp. 286-291
    • Reid, D.W.1    Lam, Q.T.2    Schneider, H.3    Walters, E.H.4
  • 14
    • 84870515120 scopus 로고    scopus 로고
    • Phenazine content in the cystic fibrosis respiratory tract negatively correlates with lung function and microbial complexity
    • Hunter RC, Klepac-Ceraj V, Lorenzi MM, Grotzinger H, Martin TR, Newman DK. 2012. Phenazine content in the cystic fibrosis respiratory tract negatively correlates with lung function and microbial complexity. Am. J. Respir. Cell Mol. Biol. 47:738-745. http://dx.doi.org/10.1165/ rcmb.2012-0088OC.
    • (2012) Am. J. Respir. Cell Mol. Biol. , vol.47 , pp. 738-745
    • Hunter, R.C.1    Klepac-Ceraj, V.2    Lorenzi, M.M.3    Grotzinger, H.4    Martin, T.R.5    Newman, D.K.6
  • 15
    • 73849089506 scopus 로고    scopus 로고
    • Endogenous phenazine antibiotics promote anaerobic survival of Pseudomonas aeruginosa via extracellular electron transfer
    • Wang Y, Kern SE, Newman DK. 2010. Endogenous phenazine antibiotics promote anaerobic survival of Pseudomonas aeruginosa via extracellular electron transfer. J. Bacteriol. 192:365-369. http://dx.doi.org/ 10.1128/JB.01188-09.
    • (2010) J. Bacteriol. , vol.192 , pp. 365-369
    • Wang, Y.1    Kern, S.E.2    Newman, D.K.3
  • 16
    • 33644907519 scopus 로고    scopus 로고
    • Rethinking "secondary" metabolism: Physiological roles for phenazine antibiotics
    • Price-Whelan A, Dietrich LE, Newman DK. 2006. Rethinking "secondary" metabolism: physiological roles for phenazine antibiotics. Nat. Chem. Biol. 2:71-78.
    • (2006) Nat. Chem. Biol. , vol.2 , pp. 71-78
    • Price-Whelan, A.1    Dietrich, L.E.2    Newman, D.K.3
  • 22
    • 36549035760 scopus 로고    scopus 로고
    • Nutritional cues control Pseudomonas aeruginosa multicellular behavior in cystic fibrosis sputum
    • Palmer KL, Aye LM, Whiteley M. 2007. Nutritional cues control Pseudomonas aeruginosa multicellular behavior in cystic fibrosis sputum. J. Bacteriol. 189:8079-8087. http://dx.doi.org/10.1128/JB.01138-07.
    • (2007) J. Bacteriol. , vol.189 , pp. 8079-8087
    • Palmer, K.L.1    Aye, L.M.2    Whiteley, M.3
  • 24
    • 0033837207 scopus 로고    scopus 로고
    • Increased sputum amino acid concentrations and auxotrophy of Pseudomonas aeruginosa in severe cystic fibrosis lung disease
    • Thomas SR, Ray A, Hodson ME, Pitt TL. 2000. Increased sputum amino acid concentrations and auxotrophy of Pseudomonas aeruginosa in severe cystic fibrosis lung disease. Thorax 55:795-797. http://dx.doi.org/ 10.1136/thorax.55.9.795.
    • (2000) Thorax , vol.55 , pp. 795-797
    • Thomas, S.R.1    Ray, A.2    Hodson, M.E.3    Pitt, T.L.4
  • 25
    • 0029760688 scopus 로고    scopus 로고
    • The high amino-acid content of sputum from cystic fibrosis patients promotes growth of auxotrophic Pseudomonas aeruginosa
    • Barth AL, Pitt TL. 1996. The high amino-acid content of sputum from cystic fibrosis patients promotes growth of auxotrophic Pseudomonas aeruginosa. J. Med. Microbiol. 45:110-119. http://dx.doi.org/10.1099/ 00222615-45-2-110.
    • (1996) J. Med. Microbiol. , vol.45 , pp. 110-119
    • Barth, A.L.1    Pitt, T.L.2
  • 26
    • 84873101916 scopus 로고    scopus 로고
    • Metabolic adaptations of Pseudomonas aeruginosa during cystic fibrosis chronic lung infections
    • Behrends V, Ryall B, Zlosnik JE, Speert DP, Bundy JG, Williams HD. 2013. Metabolic adaptations of Pseudomonas aeruginosa during cystic fibrosis chronic lung infections. Environ. Microbiol. 15:398-408. http:// dx.doi.org/10.1111/j.1462-2920.2012.02840.x.
    • (2013) Environ. Microbiol. , vol.15 , pp. 398-408
    • Behrends, V.1    Ryall, B.2    Zlosnik, J.E.3    Speert, D.P.4    Bundy, J.G.5    Williams, H.D.6
  • 28
    • 84880156720 scopus 로고    scopus 로고
    • Microevolution of Pseudomonas aeruginosa to a chronic pathogen of the cystic fibrosis lung
    • Hogardt M, Heesemann J. 2013. Microevolution of Pseudomonas aeruginosa to a chronic pathogen of the cystic fibrosis lung. Curr. Top. Microbiol. Immunol. 358:91-118
    • (2013) Curr. Top. Microbiol. Immunol. , vol.358 , pp. 91-118
    • Hogardt, M.1    Heesemann, J.2
  • 29
    • 78549263685 scopus 로고    scopus 로고
    • Adaptation of Pseudomonas aeruginosa during persistence in the cystic fibrosis lung
    • Hogardt M, Heesemann J. 2010. Adaptation of Pseudomonas aeruginosa during persistence in the cystic fibrosis lung. Int. J. Med. Microbiol. 300: 557-562. http://dx.doi.org/10.1016/j.ijmm.2010.08.008.
    • (2010) Int. J. Med. Microbiol. , vol.300 , pp. 557-562
    • Hogardt, M.1    Heesemann, J.2
  • 31
    • 58149290251 scopus 로고    scopus 로고
    • The Pseudomonas toxin pyocyanin inhibits the dual oxidase-based antimicrobial system as it imposes oxidative stress on airway epithelial cells
    • Rada B, Lekstrom K, Damian S, Dupuy C, Leto TL. 2008. The Pseudomonas toxin pyocyanin inhibits the dual oxidase-based antimicrobial system as it imposes oxidative stress on airway epithelial cells. J. Immunol. 181:4883-4893.
    • (2008) J. Immunol. , vol.181 , pp. 4883-4893
    • Rada, B.1    Lekstrom, K.2    Damian, S.3    Dupuy, C.4    Leto, T.L.5
  • 33
    • 54449089545 scopus 로고    scopus 로고
    • A polymicrobial perspective of pulmonary infections exposes an enigmatic pathogen in cystic fibrosis patients
    • Sibley CD, Parkins MD, Rabin HR, Duan K, Norgaard JC, Surette MG. 2008. A polymicrobial perspective of pulmonary infections exposes an enigmatic pathogen in cystic fibrosis patients. Proc. Natl. Acad. Sci. USA 105:15070-15075. http://dx.doi.org/10.1073/pnas.0804326105.
    • (2008) Proc. Natl. Acad. Sci. USA , vol.105 , pp. 15070-15075
    • Sibley, C.D.1    Parkins, M.D.2    Rabin, H.R.3    Duan, K.4    Norgaard, J.C.5    Surette, M.G.6
  • 36
    • 35148876440 scopus 로고    scopus 로고
    • Metagenomic analysis of the microbial community associated with the coral Porites astreoides
    • Wegley L, Edwards R, Rodriguez-Brito B, Liu H, Rohwer F. 2007. Metagenomic analysis of the microbial community associated with the coral Porites astreoides. Environ. Microbiol. 9:2707-2719. http:// dx.doi.org/10.1111/j.1462-2920.2007.01383.x.
    • (2007) Environ. Microbiol. , vol.9 , pp. 2707-2719
    • Wegley, L.1    Edwards, R.2    Rodriguez-Brito, B.3    Liu, H.4    Rohwer, F.5
  • 37
    • 79953112436 scopus 로고    scopus 로고
    • The polymicrobial nature of airway infections in cystic fibrosis: Cangene Gold Medal Lecture
    • Sibley CD, Surette MG. 2011. The polymicrobial nature of airway infections in cystic fibrosis: Cangene Gold Medal Lecture. Can. J. Microbiol. 57:69-77. http://dx.doi.org/10.1139/W10-105.
    • (2011) Can. J. Microbiol. , vol.57 , pp. 69-77
    • Sibley, C.D.1    Surette, M.G.2
  • 39
    • 84862276328 scopus 로고    scopus 로고
    • Structure, function and diversity of the healthy human microbiome
    • Microbiome, Human Project Consortium
    • Microbiome, Human Project Consortium. 2012. Structure, function and diversity of the healthy human microbiome. Nature 486:207-214. http:// dx.doi.org/10.1038/nature11234.
    • (2012) Nature , vol.486 , pp. 207-214
  • 41
    • 34047185781 scopus 로고    scopus 로고
    • Mucus structure and properties in cystic fibrosis
    • Rubin BK. 2007. Mucus structure and properties in cystic fibrosis. Paediatr. Respir. Rev. 8:4-7. http://dx.doi.org/10.1016/j.prrv.2007.02.004.
    • (2007) Paediatr. Respir. Rev. , vol.8 , pp. 4-7
    • Rubin, B.K.1
  • 47
    • 67849119065 scopus 로고    scopus 로고
    • Chemical interactions between organisms in microbial communities
    • Duan K, Sibley CD, Davidson CJ, Surette MG. 2009. Chemical interactions between organisms in microbial communities. Contrib. Microbiol. 16:1-17. http://dx.doi.org/10.1159/000219369.
    • (2009) Contrib. Microbiol. , vol.16 , pp. 1-17
    • Duan, K.1    Sibley, C.D.2    Davidson, C.J.3    Surette, M.G.4
  • 49
    • 84857741495 scopus 로고    scopus 로고
    • Identifying low pH active and lactate-utilizing taxa within oral microbiome communities from healthy children using stable isotope probing techniques
    • McLean JS, Fansler SJ, Majors PD, McAteer K, Allen LZ, Shirtliff ME, Lux R, Shi W. 2012. Identifying low pH active and lactate-utilizing taxa within oral microbiome communities from healthy children using stable isotope probing techniques. PLoS One 7:e32219. http://dx.doi.org/ 10.1371/journal.pone.0032219.
    • (2012) PLoS One , vol.7
    • McLean, J.S.1    Fansler, S.J.2    Majors, P.D.3    McAteer, K.4    Allen, L.Z.5    Shirtliff, M.E.6    Lux, R.7    Shi, W.8
  • 50
    • 72449174933 scopus 로고    scopus 로고
    • Oral biofilms: Emerging concepts in microbial ecology
    • Filoche S, Wong L, Sissons CH. 2010. Oral biofilms: emerging concepts in microbial ecology. J. Dent. Res. 89:8-18. http://dx.doi.org/10.1177/ 0022034509351812.
    • (2010) J. Dent. Res. , vol.89 , pp. 8-18
    • Filoche, S.1    Wong, L.2    Sissons, C.H.3
  • 51
    • 21244432376 scopus 로고    scopus 로고
    • Microcolony formation: A novel biofilm model of Pseudomonas aeruginosa for the cystic fibrosis lung
    • Sriramulu DD, Lünsdorf H, Lam JS, Römling U. 2005. Microcolony formation: a novel biofilm model of Pseudomonas aeruginosa for the cystic fibrosis lung. J. Med. Microbiol. 54:667-676. http://dx.doi.org/ 10.1099/jmm.0.45969-0.
    • (2005) J. Med. Microbiol. , vol.54 , pp. 667-676
    • Sriramulu, D.D.1    Lünsdorf, H.2    Lam, J.S.3    Römling, U.4
  • 52
    • 22544455625 scopus 로고    scopus 로고
    • Cystic fibrosis sputum supports growth and cues key aspects of Pseudomonas aeruginosa physiology
    • Palmer KL, Mashburn LM, Singh PK, Whiteley M. 2005. Cystic fibrosis sputum supports growth and cues key aspects of Pseudomonas aeruginosa physiology. J. Bacteriol. 187:5267-5277. http://dx.doi.org/10.1128/ JB.187.15.5267-5277.2005.
    • (2005) J. Bacteriol. , vol.187 , pp. 5267-5277
    • Palmer, K.L.1    Mashburn, L.M.2    Singh, P.K.3    Whiteley, M.4
  • 53
    • 0026574202 scopus 로고
    • ArcD, the first gene of the arc operon for anaerobic arginine catabolism in Pseudomonas aeruginosa, encodes an arginineornithine exchanger
    • Verhoogt HJ, Smit H, Abee T, Gamper M, Driessen AJ, Haas D, Konings WN. 1992. arcD, the first gene of the arc operon for anaerobic arginine catabolism in Pseudomonas aeruginosa, encodes an arginineornithine exchanger. J. Bacteriol. 174:1568-1573.
    • (1992) J. Bacteriol. , vol.174 , pp. 1568-1573
    • Verhoogt, H.J.1    Smit, H.2    Abee, T.3    Gamper, M.4    Driessen, A.J.5    Haas, D.6    Konings, W.N.7
  • 54
    • 14944341462 scopus 로고    scopus 로고
    • Innate host defense of the lung: Effects of lung-lining fluid pH
    • Ng AW, Bidani A, Heming TA. 2004. Innate host defense of the lung: effects of lung-lining fluid pH. Lung 182:297-317. http://dx.doi.org/ 10.1007/s00408-004-2511-6.
    • (2004) Lung , vol.182 , pp. 297-317
    • Ng, A.W.1    Bidani, A.2    Heming, T.A.3
  • 55
    • 78549290620 scopus 로고    scopus 로고
    • Anaerobic physiology of Pseudomonas aeruginosa in the cystic fibrosis lung
    • Schobert M, Jahn D. 2010. Anaerobic physiology of Pseudomonas aeruginosa in the cystic fibrosis lung. Int. J. Med. Microbiol. 300:549-556. http://dx.doi.org/10.1016/j.ijmm.2010.08.007.
    • (2010) Int. J. Med. Microbiol. , vol.300 , pp. 549-556
    • Schobert, M.1    Jahn, D.2
  • 56
    • 77952915341 scopus 로고    scopus 로고
    • Lipoic acid metabolism in microbial pathogens
    • Spalding MD, Prigge ST. 2010. Lipoic acid metabolism in microbial pathogens. Microbiol. Mol. Biol. Rev. 74:200-228. http://dx.doi.org/ 10.1128/MMBR.00008-10.
    • (2010) Microbiol. Mol. Biol. Rev. , vol.74 , pp. 200-228
    • Spalding, M.D.1    Prigge, S.T.2
  • 59
    • 77952878360 scopus 로고    scopus 로고
    • Metabolism and function of phenazines in bacteria: Impacts on the behavior of bacteria in the environment and biotechnological processes
    • Pierson LS, Pierson EA. 2010. Metabolism and function of phenazines in bacteria: impacts on the behavior of bacteria in the environment and biotechnological processes. Appl. Microbiol. Biotechnol. 86:1659-1670. http://dx.doi.org/10.1007/s00253-010-2509-3.
    • (2010) Appl. Microbiol. Biotechnol. , vol.86 , pp. 1659-1670
    • Pierson, L.S.1    Pierson, E.A.2
  • 60
    • 7444252099 scopus 로고    scopus 로고
    • Potential for antioxidant therapy of cystic fibrosis
    • Cantin AM. 2004. Potential for antioxidant therapy of cystic fibrosis. Curr. Opin. Pulm. Med. 10:531-536. http://dx.doi.org/10.1097/ 01.mcp.0000138997.29276.a1.
    • (2004) Curr. Opin. Pulm. Med. , vol.10 , pp. 531-536
    • Cantin, A.M.1
  • 61
    • 34548475303 scopus 로고    scopus 로고
    • Pyocyanin alters redox homeostasis and carbon flux through central metabolic pathways in Pseudomonas aeruginosa PA14
    • Price-Whelan A, Dietrich LE, Newman DK. 2007. Pyocyanin alters redox homeostasis and carbon flux through central metabolic pathways in Pseudomonas aeruginosa PA14. J. Bacteriol. 189:6372-6381. http:// dx.doi.org/10.1128/JB.00505-07.
    • (2007) J. Bacteriol. , vol.189 , pp. 6372-6381
    • Price-Whelan, A.1    Dietrich, L.E.2    Newman, D.K.3
  • 62
    • 0021507105 scopus 로고
    • Treatment of cystic fibrosis with trimethoprim-sulfamethoxarole
    • Marks MI. 1984. Treatment of cystic fibrosis with trimethoprim-sulfamethoxarole. J. Pediatr. 105:679-680. http://dx.doi.org/10.1016/ S0022-3476(84)80460-6.
    • (1984) J. Pediatr. , vol.105 , pp. 679-680
    • Marks, M.I.1
  • 63
    • 44449137093 scopus 로고    scopus 로고
    • The microbial engines that drive Earth's biogeochemical cycles
    • Falkowski PG, Fenchel T, Delong EF. 2008. The microbial engines that drive Earth's biogeochemical cycles. Science 320:1034-1039.
    • (2008) Science , vol.320 , pp. 1034-1039
    • Falkowski, P.G.1    Fenchel, T.2    Delong, E.F.3
  • 65
    • 75149170037 scopus 로고    scopus 로고
    • Dietary nitrate-good or bad?
    • Gilchrist M, Winyard PG, Benjamin N. 2010. Dietary nitrate-good or bad? Nitric Oxide 22:104-109. http://dx.doi.org/10.1016/ j.niox.2009.10.005.
    • (2010) Nitric Oxide , vol.22 , pp. 104-109
    • Gilchrist, M.1    Winyard, P.G.2    Benjamin, N.3
  • 66
    • 84869383252 scopus 로고    scopus 로고
    • Desulfurization of mucin by Pseudomonas aeruginosa: Influence of sulfate in the lungs of cystic fibrosis patients
    • Robinson CV, Elkins MR, Bialkowski KM, Thornton DJ, Kertesz MA. 2012. Desulfurization of mucin by Pseudomonas aeruginosa: influence of sulfate in the lungs of cystic fibrosis patients. J. Med. Microbiol. 61: 1644-1653. http://dx.doi.org/10.1099/jmm.0.047167-0.
    • (2012) J. Med. Microbiol. , vol.61 , pp. 1644-1653
    • Robinson, C.V.1    Elkins, M.R.2    Bialkowski, K.M.3    Thornton, D.J.4    Kertesz, M.A.5
  • 67
    • 0036669911 scopus 로고    scopus 로고
    • Cytochrome cbb(3) oxidase and bacterial microaerobic metabolism
    • Pitcher RS, Brittain T, Watmough NJ. 2002. Cytochrome cbb(3) oxidase and bacterial microaerobic metabolism. Biochem. Soc. Trans. 30: 653-658.
    • (2002) Biochem. Soc. Trans. , vol.30 , pp. 653-658
    • Pitcher, R.S.1    Brittain, T.2    Watmough, N.J.3
  • 68
    • 34250620817 scopus 로고    scopus 로고
    • Responses of Pseudomonas aeruginosa to low oxygen indicate that growth in the cystic fibrosis lung is by aerobic respiration
    • Alvarez-Ortega C, Harwood CS. 2007. Responses of Pseudomonas aeruginosa to low oxygen indicate that growth in the cystic fibrosis lung is by aerobic respiration. Mol. Microbiol. 65:153-165. http://dx.doi.org/ 10.1111/j.1365-2958.2007.05772.x.
    • (2007) Mol. Microbiol. , vol.65 , pp. 153-165
    • Alvarez-Ortega, C.1    Harwood, C.S.2
  • 72
    • 0034523682 scopus 로고    scopus 로고
    • Airway nitric oxide levels in cystic fibrosis patients are related to a polymorphism in the neuronal nitric oxide synthase gene
    • Grasemann H, Knauer N, Büscher R, Hübner K, Drazen JM, Ratjen F. 2000. Airway nitric oxide levels in cystic fibrosis patients are related to a polymorphism in the neuronal nitric oxide synthase gene. Am. J. Respir. Crit. Care Med. 162:2172-2176. http://dx.doi.org/10.1164/ ajrccm.162.6.2003106.
    • (2000) Am. J. Respir. Crit. Care Med. , vol.162 , pp. 2172-2176
    • Grasemann, H.1    Knauer, N.2    Büscher, R.3    Hübner, K.4    Drazen, J.M.5    Ratjen, F.6
  • 73
    • 79960251932 scopus 로고    scopus 로고
    • Assessment of the importance of dissimilatory nitrate reduction to ammonium for the terrestrial nitrogen cycle
    • Rütting T, Boeckx P, Müller C, Klemedtsson L. 2011. Assessment of the importance of dissimilatory nitrate reduction to ammonium for the terrestrial nitrogen cycle. Biogeosciences 8:1779-1791. http://dx.doi.org/ 10.5194/bg-8-1779-2011.
    • (2011) Biogeosciences , vol.8 , pp. 1779-1791
    • Rütting, T.1    Boeckx, P.2    Müller, C.3    Klemedtsson, L.4
  • 74
    • 33847682276 scopus 로고    scopus 로고
    • Have we overemphasized the role of denitrification in aquatic ecosystems? A review of nitrate removal pathways
    • Burgin AJ, Hamilton SK. 2007. Have we overemphasized the role of denitrification in aquatic ecosystems? A review of nitrate removal pathways. Front. Ecol. Environ. 5:89-96. http://dx.doi.org/10.1890/1540-9295(2007)5[89:HWOTRO]2.0.CO;2.
    • (2007) Front. Ecol. Environ. , vol.5 , pp. 89-96
    • Burgin, A.J.1    Hamilton, S.K.2
  • 75
    • 0032835980 scopus 로고    scopus 로고
    • The napF and narG nitrate reductase operons in Escherichia coli are differentially expressed in response to submicromolar concentrations of nitrate but not nitrite
    • Wang H, Tseng CP, Gunsalus RP. 1999. The napF and narG nitrate reductase operons in Escherichia coli are differentially expressed in response to submicromolar concentrations of nitrate but not nitrite. J. Bacteriol. 181:5303-5308.
    • (1999) J. Bacteriol. , vol.181 , pp. 5303-5308
    • Wang, H.1    Tseng, C.P.2    Gunsalus, R.P.3
  • 76
    • 0035107176 scopus 로고    scopus 로고
    • Functional, biochemical and genetic diversity of prokaryotic nitrate reductases
    • Richardson DJ, Berks BC, Russell DA, Spiro S, Taylor CJ. 2001. Functional, biochemical and genetic diversity of prokaryotic nitrate reductases. Cell. Mol. Life Sci. 58:165-178. http://dx.doi.org/10.1007/PL00000845.
    • (2001) Cell. Mol. Life Sci. , vol.58 , pp. 165-178
    • Richardson, D.J.1    Berks, B.C.2    Russell, D.A.3    Spiro, S.4    Taylor, C.J.5
  • 77
    • 84860375761 scopus 로고    scopus 로고
    • Distribution of nitrogen fixation and nitrogenase-like sequences amongst microbial genomes
    • Dos Santos PC, Fang Z, Mason SW, Setubal JC, Dixon R. 2012. Distribution of nitrogen fixation and nitrogenase-like sequences amongst microbial genomes. BMC Genomics 13:162. http://dx.doi.org/10.1186/ 1471-2164-13-162.
    • (2012) BMC Genomics , vol.13 , pp. 162
    • Dos Santos, P.C.1    Fang, Z.2    Mason, S.W.3    Setubal, J.C.4    Dixon, R.5
  • 78
    • 78649647597 scopus 로고    scopus 로고
    • Role of epithelial HCO3+ transport in mucin secretion: Lessons from cystic fibrosis
    • Quinton PM. 2010. Role of epithelial HCO3+ transport in mucin secretion: lessons from cystic fibrosis. Am. J. Physiol. Cell Physiol. 299: C1222-C1233. http://dx.doi.org/10.1152/ajpcell.00362.2010.
    • (2010) Am. J. Physiol. Cell Physiol. , vol.299
    • Quinton, P.M.1
  • 81
    • 84883420466 scopus 로고    scopus 로고
    • Ferrous iron is a significant component of bioavailable iron in cystic fibrosis airways
    • e00557-13
    • Hunter RC, Asfour F, Dingemans J, Osuna BL, Samad T, Malfroot A, Cornelis P, Newman DK. 2013. Ferrous iron is a significant component of bioavailable iron in cystic fibrosis airways. mBio 4(4):e00557-13. http:// dx.doi.org/10.1128/mBio.00557-13.
    • (2013) mBio , vol.4 , Issue.4
    • Hunter, R.C.1    Asfour, F.2    Dingemans, J.3    Osuna, B.L.4    Samad, T.5    Malfroot, A.6    Cornelis, P.7    Newman, D.K.8
  • 82
    • 27944483300 scopus 로고    scopus 로고
    • Alkaline pH homeostasis in bacteria: New insights
    • Padan E, Bibi E, Ito M, Krulwich TA. 2005. Alkaline pH homeostasis in bacteria: new insights. Biochim. Biophys. Acta 1717:67-88. http:// dx.doi.org/10.1016/j.bbamem.2005.09.010.
    • (2005) Biochim. Biophys. Acta , vol.1717 , pp. 67-88
    • Padan, E.1    Bibi, E.2    Ito, M.3    Krulwich, T.A.4
  • 83
    • 0031049325 scopus 로고    scopus 로고
    • Acid stress responses in enterobacteria
    • Bearson S, Bearson B, Foster JW. 1997. Acid stress responses in enterobacteria. FEMS Microbiol. Lett. 147:173-180. http://dx.doi.org/10.1111/ j.1574-6968.1997.tb10238.x.
    • (1997) FEMS Microbiol. Lett. , vol.147 , pp. 173-180
    • Bearson, S.1    Bearson, B.2    Foster, J.W.3
  • 85
    • 84871140204 scopus 로고    scopus 로고
    • Role of glutamate metabolism in bacterial responses towards acid and other stresses
    • Feehily C, Karatzas KA. 2013. Role of glutamate metabolism in bacterial responses towards acid and other stresses. J. Appl. Microbiol. 114:11-24. http://dx.doi.org/10.1111/j.1365-2672.2012.05434.x.
    • (2013) J. Appl. Microbiol. , vol.114 , pp. 11-24
    • Feehily, C.1    Karatzas, K.A.2
  • 86
    • 79952390994 scopus 로고    scopus 로고
    • Fast identification and removal of sequence contamination from genomic and metagenomic datasets
    • Schmieder R, Edwards R. 2011. Fast identification and removal of sequence contamination from genomic and metagenomic datasets. PLoS One 6:e17288. http://dx.doi.org/10.1371/journal.pone.0017288.
    • (2011) PLoS One , vol.6
    • Schmieder, R.1    Edwards, R.2
  • 87
    • 79952422304 scopus 로고    scopus 로고
    • Quality control and preprocessing of metagenomic datasets
    • Schmieder R, Edwards R. 2011. Quality control and preprocessing of metagenomic datasets. Bioinformatics 27:863-864. http://dx.doi.org/ 10.1093/bioinformatics/btr026.
    • (2011) Bioinformatics , vol.27 , pp. 863-864
    • Schmieder, R.1    Edwards, R.2
  • 89
    • 0035709008 scopus 로고    scopus 로고
    • A rapid, simple spectrophotometric method for simultaneous detection of nitrate and nitrite
    • Miranda KM, Espey MG, Wink DA. 2001. A rapid, simple spectrophotometric method for simultaneous detection of nitrate and nitrite. Nitric Oxide 5:62-71. http://dx.doi.org/10.1006/niox.2000.0319.
    • (2001) Nitric Oxide , vol.5 , pp. 62-71
    • Miranda, K.M.1    Espey, M.G.2    Wink, D.A.3
  • 92
    • 66649098780 scopus 로고    scopus 로고
    • Occurrence of phosphate acquisition genes in Prochlorococcus cells from different ocean regions
    • Martiny AC, Huang Y, Li W. 2009. Occurrence of phosphate acquisition genes in Prochlorococcus cells from different ocean regions. Environ. Microbiol. 11:1340-1347.
    • (2009) Environ. Microbiol. , vol.11 , pp. 1340-1347
    • Martiny, A.C.1    Huang, Y.2    Li, W.3


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