-
1
-
-
77955602581
-
Through ageing, and beyond: gut microbiota and inflammatory status in seniors and centenarians
-
Biagi E, Nylund L, Candela M, Ostan R, Bucci L, et al. (2010) Through ageing, and beyond: gut microbiota and inflammatory status in seniors and centenarians. PLoS One 5 (5): e10667.
-
(2010)
PLoS One
, vol.5
, Issue.5
-
-
Biagi, E.1
Nylund, L.2
Candela, M.3
Ostan, R.4
Bucci, L.5
-
2
-
-
79952757721
-
Microbes and Health Sackler colloquium: composition, variability, and temporal stability of the intestinal microbiota of the elderly
-
Claesson MJ, Cusack S, O'Sullivan O, Greene-Diniz R, de Weerd H, et al. (2011) Microbes and Health Sackler colloquium: composition, variability, and temporal stability of the intestinal microbiota of the elderly. Proc Natl Acad Sci U S A 108 (Suppl 1): 4586-4591.
-
(2011)
Proc Natl Acad Sci U S A
, vol.108
, Issue.SUPPL. 1
, pp. 4586-4591
-
-
Claesson, M.J.1
Cusack, S.2
O'Sullivan, O.3
Greene-Diniz, R.4
de Weerd, H.5
-
3
-
-
54349126970
-
High-throughput diversity and functionality analysis of the gastrointestinal tract microbiota
-
Zoetendal EG, Rajilić-Stojanović M, de Vos WM, (2008) High-throughput diversity and functionality analysis of the gastrointestinal tract microbiota. Gut 57 (11): 1605-1615.
-
(2008)
Gut
, vol.57
, Issue.11
, pp. 1605-1615
-
-
Zoetendal, E.G.1
Rajilić-Stojanović, M.2
de Vos, W.M.3
-
4
-
-
27744580095
-
Resilience of the dominant human fecal microbiota upon short-course antibiotic challenge
-
De La Cochetière MF, Durand T, Lepage P, Bourreille A, Galmiche JP, et al. (2005) Resilience of the dominant human fecal microbiota upon short-course antibiotic challenge. J Clin Microbiol 43 (11): 5588-5592.
-
(2005)
J Clin Microbiol
, vol.43
, Issue.11
, pp. 5588-5592
-
-
de la Cochetière, M.F.1
Durand, T.2
Lepage, P.3
Bourreille, A.4
Galmiche, J.P.5
-
5
-
-
56849106496
-
The pervasive effects of an antibiotic on the human gut microbiota, as revealed by deep 16S rRNA sequencing
-
Dethlefsen L, Huse S, Sogin ML, Relman DA, (2008) The pervasive effects of an antibiotic on the human gut microbiota, as revealed by deep 16S rRNA sequencing. PLoS Biol 6 (11): e280.
-
(2008)
PLoS Biol
, vol.6
, Issue.11
-
-
Dethlefsen, L.1
Huse, S.2
Sogin, M.L.3
Relman, D.A.4
-
6
-
-
78049522796
-
Long-term impacts of antibiotic exposure on the human intestinal microbiota
-
Jernberg C, Lofmark S, Edlund C, Jansson JK, (2010) Long-term impacts of antibiotic exposure on the human intestinal microbiota. Microbiology 156 (Pt 11): 3216-3223.
-
(2010)
Microbiology
, vol.156
, Issue.PART 11
, pp. 3216-3223
-
-
Jernberg, C.1
Lofmark, S.2
Edlund, C.3
Jansson, J.K.4
-
7
-
-
33744804299
-
Metagenomic analysis of the human distal gut microbiome
-
Gill SR, Pop M, Deboy RT, Eckburg PB, Turnbaugh PJ, et al. (2006) Metagenomic analysis of the human distal gut microbiome. Science 312 (5778): 1355-1359.
-
(2006)
Science
, vol.312
, Issue.5778
, pp. 1355-1359
-
-
Gill, S.R.1
Pop, M.2
Deboy, R.T.3
Eckburg, P.B.4
Turnbaugh, P.J.5
-
8
-
-
38449088143
-
Comparative metagenomics revealed commonly enriched gene sets in human gut microbiomes
-
Kurokawa K, Itoh T, Kuwahara T, Oshima K, Toh H, et al. (2007) Comparative metagenomics revealed commonly enriched gene sets in human gut microbiomes. DNA Res 14 (4): 169-181.
-
(2007)
DNA Res
, vol.14
, Issue.4
, pp. 169-181
-
-
Kurokawa, K.1
Itoh, T.2
Kuwahara, T.3
Oshima, K.4
Toh, H.5
-
9
-
-
58749112734
-
A core gut microbiome in obese and lean twins
-
Turnbaugh PJ, Hamady M, Yatsunenko T, Cantarel BL, Duncan A, et al. (2009) A core gut microbiome in obese and lean twins. Nature 457 (7228): 480-484.
-
(2009)
Nature
, vol.457
, Issue.7228
, pp. 480-484
-
-
Turnbaugh, P.J.1
Hamady, M.2
Yatsunenko, T.3
Cantarel, B.L.4
Duncan, A.5
-
10
-
-
77950251400
-
A human gut microbial gene catalogue established by metagenomic sequencing
-
Qin J, Li R, Raes J, Arumugam M, Burgdorf KS, et al. (2010) A human gut microbial gene catalogue established by metagenomic sequencing. Nature 464 (7285): 59-65.
-
(2010)
Nature
, vol.464
, Issue.7285
, pp. 59-65
-
-
Qin, J.1
Li, R.2
Raes, J.3
Arumugam, M.4
Burgdorf, K.S.5
-
11
-
-
77953050946
-
A catalog of reference genomes from the human microbiome
-
Human Microbiome Jumpstart Reference Strains Consortium
-
Nelson KE, Weinstock GM, Highlander SK, Worley KC, et al. Human Microbiome Jumpstart Reference Strains Consortium (2010) A catalog of reference genomes from the human microbiome. Science 328 (5981): 994-999.
-
(2010)
Science
, vol.328
, Issue.5981
, pp. 994-999
-
-
Nelson, K.E.1
Weinstock, G.M.2
Highlander, S.K.3
Worley, K.C.4
-
12
-
-
77952158672
-
Organismal, genetic, and transcriptional variation in the deeply sequenced gut microbiomes of identical twins
-
Turnbaugh PJ, Quince C, Faith JJ, McHardy AC, Yatsunenko T, et al. (2010) Organismal, genetic, and transcriptional variation in the deeply sequenced gut microbiomes of identical twins. Proc Natl Acad Sci U S A 107 (16): 7503-7508.
-
(2010)
Proc Natl Acad Sci U S A
, vol.107
, Issue.16
, pp. 7503-7508
-
-
Turnbaugh, P.J.1
Quince, C.2
Faith, J.J.3
McHardy, A.C.4
Yatsunenko, T.5
-
13
-
-
77955963505
-
Metatranscriptome analysis of the human fecal microbiota reveals subject-specific expression profiles, with genes encoding proteins involved in carbohydrate metabolism being dominantly expressed
-
Booijink CC, Boekhorst J, Zoetendal EG, Smidt H, Kleerebezem M, et al. (2010) Metatranscriptome analysis of the human fecal microbiota reveals subject-specific expression profiles, with genes encoding proteins involved in carbohydrate metabolism being dominantly expressed. Appl Environ Microbiol 76 (16): 5533-5540.
-
(2010)
Appl Environ Microbiol
, vol.76
, Issue.16
, pp. 5533-5540
-
-
Booijink, C.C.1
Boekhorst, J.2
Zoetendal, E.G.3
Smidt, H.4
Kleerebezem, M.5
-
14
-
-
65549147992
-
Mixed-species genomic microarray analysis of fecal samples reveals differential transcriptional responses of bifidobacteria in breast- and formula-fed infants
-
Klaassens ES, Boesten RJ, Haarman M, Knol J, Schuren FH, et al. (2009) Mixed-species genomic microarray analysis of fecal samples reveals differential transcriptional responses of bifidobacteria in breast- and formula-fed infants. Appl Environ Microbiol 75 (9): 2668-2676.
-
(2009)
Appl Environ Microbiol
, vol.75
, Issue.9
, pp. 2668-2676
-
-
Klaassens, E.S.1
Boesten, R.J.2
Haarman, M.3
Knol, J.4
Schuren, F.H.5
-
15
-
-
27744606973
-
Role of mRNA stability during genome-wide adaptation of Lactococcus lactis to carbon starvation
-
Redon E, Loubière P, Cocaign-Bousquet M, (2005) Role of mRNA stability during genome-wide adaptation of Lactococcus lactis to carbon starvation. J Biol Chem 280 (43): 36380-36385.
-
(2005)
J Biol Chem
, vol.280
, Issue.43
, pp. 36380-36385
-
-
Redon, E.1
Loubière, P.2
Cocaign-Bousquet, M.3
-
16
-
-
0036139093
-
Why are proteins marginally stable?
-
Taverna DM, Goldstein RA, (2002) Why are proteins marginally stable? Proteins 46 (1): 105-109.
-
(2002)
Proteins
, vol.46
, Issue.1
, pp. 105-109
-
-
Taverna, D.M.1
Goldstein, R.A.2
-
17
-
-
33847177982
-
Metaproteomics approach to study the functionality of the microbiota in the human infant gastrointestinal tract
-
Klaassens ES, de Vos WM, Vaughan EE, (2007) Metaproteomics approach to study the functionality of the microbiota in the human infant gastrointestinal tract. Appl Environ Microbiol 73 (4): 1388-1392.
-
(2007)
Appl Environ Microbiol
, vol.73
, Issue.4
, pp. 1388-1392
-
-
Klaassens, E.S.1
de Vos, W.M.2
Vaughan, E.E.3
-
18
-
-
58549089276
-
Shotgun metaproteomics of the human distal gut microbiota
-
Verberkmoes NC, Russell AL, Shah M, Godzik A, Rosenquist M, et al. (2009) Shotgun metaproteomics of the human distal gut microbiota. ISME J 3 (2): 179-189.
-
(2009)
ISME J
, vol.3
, Issue.2
, pp. 179-189
-
-
Verberkmoes, N.C.1
Russell, A.L.2
Shah, M.3
Godzik, A.4
Rosenquist, M.5
-
19
-
-
78650780115
-
An iterative workflow for mining the human intestinal metaproteome
-
Rooijers K, Kolmeder C, Juste C, Doré J, de Been M, et al. (2011) An iterative workflow for mining the human intestinal metaproteome. BMC Genomics 12 (1): 6.
-
(2011)
BMC Genomics
, vol.12
, Issue.1
, pp. 6
-
-
Rooijers, K.1
Kolmeder, C.2
Juste, C.3
Doré, J.4
de Been, M.5
-
20
-
-
77951977802
-
Comparative analysis of fecal DNA extraction methods with phylogenetic microarray: effective recovery of bacterial and archaeal DNA using mechanical cell lysis
-
Salonen A, Nikkilä J, Jalanka-Tuovinen J, Immonen O, Rajilić-Stojanović M, et al. (2010) Comparative analysis of fecal DNA extraction methods with phylogenetic microarray: effective recovery of bacterial and archaeal DNA using mechanical cell lysis. J Microbiol Methods 81 (2): 127-134.
-
(2010)
J Microbiol Methods
, vol.81
, Issue.2
, pp. 127-134
-
-
Salonen, A.1
Nikkilä, J.2
Jalanka-Tuovinen, J.3
Immonen, O.4
Rajilić-Stojanović, M.5
-
21
-
-
0030660581
-
A genomic perspective on protein families
-
Tatusov RL, Koonin EV, Lipman DJ, (1997) A genomic perspective on protein families. Science 278 (5338): 631-637.
-
(1997)
Science
, vol.278
, Issue.5338
, pp. 631-637
-
-
Tatusov, R.L.1
Koonin, E.V.2
Lipman, D.J.3
-
22
-
-
0028091277
-
Formation of l-alanine as a reduced end product in carbohydrate fermentation by the hyperthermophilic archaeon Pyrococcus furiosus
-
Kengen SWM, Stams AJM, (1994) Formation of l-alanine as a reduced end product in carbohydrate fermentation by the hyperthermophilic archaeon Pyrococcus furiosus. Arch Microbiol 2 pp. 168-175.
-
(1994)
Arch Microbiol
, Issue.2
, pp. 168-175
-
-
Kengen, S.W.M.1
Stams, A.J.M.2
-
23
-
-
40849124148
-
Fe-S cluster assembly pathways in bacteria
-
Table of contents
-
Ayala-Castro C, Saini A, Outten FW, (2008) Fe-S cluster assembly pathways in bacteria. Microbiol Mol Biol Rev 72 (1): 110-125, table of contents.
-
(2008)
Microbiol Mol Biol Rev
, vol.72
, Issue.1
, pp. 110-125
-
-
Ayala-Castro, C.1
Saini, A.2
Outten, F.W.3
-
24
-
-
77956648022
-
High temporal and inter-individual variation detected in the human ileal microbiota
-
Booijink CC, El-Aidy S, Rajilić-Stojanović M, Heilig HG, Troost FJ, et al. (2010) High temporal and inter-individual variation detected in the human ileal microbiota. Environ Microbiol 12 (12): 3213-3227.
-
(2010)
Environ Microbiol
, vol.12
, Issue.12
, pp. 3213-3227
-
-
Booijink, C.C.1
El-Aidy, S.2
Rajilić-Stojanović, M.3
Heilig, H.G.4
Troost, F.J.5
-
25
-
-
65449149031
-
Structure and functions of keratin proteins in simple, stratified, keratinized and cornified epithelia
-
Bragulla HH, Homberger DG, (2009) Structure and functions of keratin proteins in simple, stratified, keratinized and cornified epithelia. J Anat 214 (4): 516-559.
-
(2009)
J Anat
, vol.214
, Issue.4
, pp. 516-559
-
-
Bragulla, H.H.1
Homberger, D.G.2
-
26
-
-
67649945513
-
Development and application of the human intestinal tract chip, a phylogenetic microarray: analysis of universally conserved phylotypes in the abundant microbiota of young and elderly adults
-
Rajilić-Stojanović M, Heilig HG, Molenaar D, Kajander K, Surakka A, et al. (2009) Development and application of the human intestinal tract chip, a phylogenetic microarray: analysis of universally conserved phylotypes in the abundant microbiota of young and elderly adults. Environ Microbiol 11 (7): 1736-1751.
-
(2009)
Environ Microbiol
, vol.11
, Issue.7
, pp. 1736-1751
-
-
Rajilić-Stojanović, M.1
Heilig, H.G.2
Molenaar, D.3
Kajander, K.4
Surakka, A.5
-
27
-
-
0035478854
-
Random forests
-
Breiman L, (2001) Random forests. Machine Learning 45 (1): 5-32.
-
(2001)
Machine Learning
, vol.45
, Issue.1
, pp. 5-32
-
-
Breiman, L.1
-
28
-
-
79952294582
-
The genome of Akkermansia muciniphila, a dedicated intestinal mucin degrader, and its use in exploring intestinal metagenomes
-
van Passel MW, Kant R, Zoetendal EG, Plugge CM, Derrien M, et al. (2011) The genome of Akkermansia muciniphila, a dedicated intestinal mucin degrader, and its use in exploring intestinal metagenomes. PLoS One 6 (3): e16876.
-
(2011)
PLoS One
, vol.6
, Issue.3
-
-
van Passel, M.W.1
Kant, R.2
Zoetendal, E.G.3
Plugge, C.M.4
Derrien, M.5
-
29
-
-
79952401369
-
Metatranscriptomic approach to analyze the functional human gut microbiota
-
Gosalbes MJ, Dúrban A, Pignatelli M, Abellan JJ, Jimenez-Hernandez N, et al. (2011) Metatranscriptomic approach to analyze the functional human gut microbiota. PLoS One 6 (3): e17447.
-
(2011)
PLoS One
, vol.6
, Issue.3
-
-
Gosalbes, M.J.1
Dúrban, A.2
Pignatelli, M.3
Abellan, J.J.4
Jimenez-Hernandez, N.5
-
30
-
-
77649119543
-
Diversity of human colonic butyrate-producing bacteria revealed by analysis of the butyryl-CoA:acetate CoA-transferase gene
-
Louis P, Young P, Holtrop G, Flint HJ, (2010) Diversity of human colonic butyrate-producing bacteria revealed by analysis of the butyryl-CoA:acetate CoA-transferase gene. Environ Microbiol 12 (2): 304-314.
-
(2010)
Environ Microbiol
, vol.12
, Issue.2
, pp. 304-314
-
-
Louis, P.1
Young, P.2
Holtrop, G.3
Flint, H.J.4
-
31
-
-
78049490714
-
Comparative genomics of the genus Bifidobacterium
-
Bottacini F, Medini D, Pavesi A, Turroni F, Foroni E, et al. (2010) Comparative genomics of the genus Bifidobacterium. Microbiology 156 (Pt 11): 3243-3254.
-
(2010)
Microbiology
, vol.156
, Issue.PART 11
, pp. 3243-3254
-
-
Bottacini, F.1
Medini, D.2
Pavesi, A.3
Turroni, F.4
Foroni, E.5
-
32
-
-
79953731940
-
A closer look at bacteroides: phylogenetic relationship and genomic implications of a life in the human gut
-
Karlsson FH, Ussery DW, Nielsen J, Nookaew I, (2011) A closer look at bacteroides: phylogenetic relationship and genomic implications of a life in the human gut. Microb Ecol 61 (3): 473-485.
-
(2011)
Microb Ecol
, vol.61
, Issue.3
, pp. 473-485
-
-
Karlsson, F.H.1
Ussery, D.W.2
Nielsen, J.3
Nookaew, I.4
-
33
-
-
8144224956
-
Lactate-utilizing bacteria, isolated from human feces, that produce butyrate as a major fermentation product
-
Duncan SH, Louis P, Flint HJ, (2004) Lactate-utilizing bacteria, isolated from human feces, that produce butyrate as a major fermentation product. Appl Environ Microbiol 70 (10): 5810-5817.
-
(2004)
Appl Environ Microbiol
, vol.70
, Issue.10
, pp. 5810-5817
-
-
Duncan, S.H.1
Louis, P.2
Flint, H.J.3
-
34
-
-
73149103678
-
Soil metaproteomics: A review of an emerging environmental science. Significance, methodology and perspectives
-
Bastida F, Moreno JL, Nicolás C, Hernández T, García C, (2009) Soil metaproteomics: A review of an emerging environmental science. Significance, methodology and perspectives. European Journal of Soil Science 60 (6): 845-859.
-
(2009)
European Journal of Soil Science
, vol.60
, Issue.6
, pp. 845-859
-
-
Bastida, F.1
Moreno, J.L.2
Nicolás, C.3
Hernández, T.4
García, C.5
-
35
-
-
63849227439
-
Environmental proteomics: Applications of proteome profiling in environmental microbiology and biotechnology
-
Lacerda CM, Reardon KF, (2009) Environmental proteomics: Applications of proteome profiling in environmental microbiology and biotechnology. Brief Funct Genomic Proteomic 8 (1): 75-87.
-
(2009)
Brief Funct Genomic Proteomic
, vol.8
, Issue.1
, pp. 75-87
-
-
Lacerda, C.M.1
Reardon, K.F.2
-
36
-
-
67650021209
-
Microbial community profiling for human microbiome projects: tools, techniques, and challenges
-
Hamady M, Knight R, (2009) Microbial community profiling for human microbiome projects: tools, techniques, and challenges. Genome Res 19 (7): 1141-1152.
-
(2009)
Genome Res
, vol.19
, Issue.7
, pp. 1141-1152
-
-
Hamady, M.1
Knight, R.2
-
37
-
-
0031684010
-
Temperature gradient gel electrophoresis analysis of 16S rRNA from human fecal samples reveals stable and host-specific communities of active bacteria
-
Zoetendal EG, Akkermans AD, De Vos WM, (1998) Temperature gradient gel electrophoresis analysis of 16S rRNA from human fecal samples reveals stable and host-specific communities of active bacteria. Appl Environ Microbiol 64 (10): 3854-3859.
-
(1998)
Appl Environ Microbiol
, vol.64
, Issue.10
, pp. 3854-3859
-
-
Zoetendal, E.G.1
Akkermans, A.D.2
de Vos, W.M.3
-
38
-
-
77955874456
-
Direct sequencing of the human microbiome readily reveals community differences
-
Kuczynski J, Costello EK, Nemergut DR, Zaneveld J, Lauber CL, et al. (2010) Direct sequencing of the human microbiome readily reveals community differences. Genome Biol 11 (5): 210.
-
(2010)
Genome Biol
, vol.11
, Issue.5
, pp. 210
-
-
Kuczynski, J.1
Costello, E.K.2
Nemergut, D.R.3
Zaneveld, J.4
Lauber, C.L.5
-
39
-
-
77955490026
-
Expansion of the protein repertoire in newly explored environments: human gut microbiome specific protein families
-
Ellrott K, Jaroszewski L, Li W, Wooley JC, Godzik A, (2010) Expansion of the protein repertoire in newly explored environments: human gut microbiome specific protein families. PLoS Comput Biol 6 (6): e1000798.
-
(2010)
PLoS Comput Biol
, vol.6
, Issue.6
-
-
Ellrott, K.1
Jaroszewski, L.2
Li, W.3
Wooley, J.C.4
Godzik, A.5
-
40
-
-
38749111835
-
Toll like receptor-5: protecting the gut from enteric microbes
-
Vijay-Kumar M, Aitken JD, Gewirtz AT, (2008) Toll like receptor-5: protecting the gut from enteric microbes. Semin Immunopathol 30 (1): 11-21.
-
(2008)
Semin Immunopathol
, vol.30
, Issue.1
, pp. 11-21
-
-
Vijay-Kumar, M.1
Aitken, J.D.2
Gewirtz, A.T.3
-
41
-
-
0036739483
-
Roseburia intestinalis sp. nov., a novel saccharolytic, butyrate-producing bacterium from human faeces
-
Duncan SH, Hold GL, Barcenilla A, Stewart CS, Flint HJ, (2002) Roseburia intestinalis sp. nov., a novel saccharolytic, butyrate-producing bacterium from human faeces. Int J Syst Evol Microbiol 52 (Pt 5): 1615-1620.
-
(2002)
Int J Syst Evol Microbiol
, vol.52
, Issue.PART 5
, pp. 1615-1620
-
-
Duncan, S.H.1
Hold, G.L.2
Barcenilla, A.3
Stewart, C.S.4
Flint, H.J.5
-
42
-
-
52049083187
-
Antibodies to flagellin indicate reactivity to bacterial antigens in IBS patients
-
Schoepfer AM, Schaffer T, Seibold-Schmid B, Muller S, Seibold F, (2008) Antibodies to flagellin indicate reactivity to bacterial antigens in IBS patients. Neurogastroenterol Motil 20 (10): 1110-1118.
-
(2008)
Neurogastroenterol Motil
, vol.20
, Issue.10
, pp. 1110-1118
-
-
Schoepfer, A.M.1
Schaffer, T.2
Seibold-Schmid, B.3
Muller, S.4
Seibold, F.5
-
43
-
-
70350134948
-
Comparative genomic analysis of Lactobacillus rhamnosus GG reveals pili containing a human-mucus binding protein
-
Kankainen M, Paulin L, Tynkkynen S, von Ossowski I, Reunanen J, et al. (2009) Comparative genomic analysis of Lactobacillus rhamnosus GG reveals pili containing a human-mucus binding protein. Proc Natl Acad Sci U S A 106 (40): 17193-17198.
-
(2009)
Proc Natl Acad Sci U S A
, vol.106
, Issue.40
, pp. 17193-17198
-
-
Kankainen, M.1
Paulin, L.2
Tynkkynen, S.3
von Ossowski, I.4
Reunanen, J.5
-
44
-
-
58049194098
-
S layer protein A of lactobacillus acidophilus NCFM regulates immature dendritic cell and T cell functions
-
Konstantinov SR, Smidt H, de Vos WM, Bruijns SC, Singh SK, et al. (2008) S layer protein A of lactobacillus acidophilus NCFM regulates immature dendritic cell and T cell functions. Proc Natl Acad Sci U S A 105 (49): 19474-19479.
-
(2008)
Proc Natl Acad Sci U S A
, vol.105
, Issue.49
, pp. 19474-19479
-
-
Konstantinov, S.R.1
Smidt, H.2
de Vos, W.M.3
Bruijns, S.C.4
Singh, S.K.5
-
45
-
-
78649875979
-
Differential proteomic shotgun analysis elucidates involvement of water channel aquaporin 8 in presence of α-amylase in the colon
-
Magdeldin S, Li H, Yoshida Y, Satokata I, Maeda Y, et al. (2010) Differential proteomic shotgun analysis elucidates involvement of water channel aquaporin 8 in presence of α-amylase in the colon. J Proteome Res 9 (12): 6635-6646.
-
(2010)
J Proteome Res
, vol.9
, Issue.12
, pp. 6635-6646
-
-
Magdeldin, S.1
Li, H.2
Yoshida, Y.3
Satokata, I.4
Maeda, Y.5
-
46
-
-
78751580602
-
Dominant and diet-responsive groups of bacteria within the human colonic microbiota
-
Walker AW, Ince J, Duncan SH, Webster LM, Holtrop G, et al. (2011) Dominant and diet-responsive groups of bacteria within the human colonic microbiota. ISME J 5 (2): 220-230.
-
(2011)
ISME J
, vol.5
, Issue.2
, pp. 220-230
-
-
Walker, A.W.1
Ince, J.2
Duncan, S.H.3
Webster, L.M.4
Holtrop, G.5
-
47
-
-
34547550284
-
Diversity of the human gastrointestinal microbiota - novel perspectives from high troughput analyses (PhD thesis)
-
Wageningen University and Research centre, Wageningen, The Netherlands
-
Rajilić-Stojanović M, (2007): Diversity of the human gastrointestinal microbiota- novel perspectives from high troughput analyses (PhD thesis). Wageningen University and Research centre, Wageningen, The Netherlands.
-
(2007)
-
-
Rajilić-Stojanović, M.1
-
48
-
-
23744446233
-
Genetic diversity of viable, injured, and dead fecal bacteria assessed by fluorescence-activated cell sorting and 16S rRNA gene analysis
-
Ben-Amor K, Heilig H, Smidt H, Vaughan EE, Abee T, et al. (2005) Genetic diversity of viable, injured, and dead fecal bacteria assessed by fluorescence-activated cell sorting and 16S rRNA gene analysis. Appl Environ Microbiol 71 (8): 4679-4689.
-
(2005)
Appl Environ Microbiol
, vol.71
, Issue.8
, pp. 4679-4689
-
-
Ben-Amor, K.1
Heilig, H.2
Smidt, H.3
Vaughan, E.E.4
Abee, T.5
-
49
-
-
9644267200
-
Impact of consumption of oligosaccharide-containing biscuits on the fecal microbiota of humans
-
Tannock GW, Munro K, Bibiloni R, Simon MA, Hargreaves P, et al. (2004) Impact of consumption of oligosaccharide-containing biscuits on the fecal microbiota of humans. Appl Environ Microbiol 70 (4): 2129-2136.
-
(2004)
Appl Environ Microbiol
, vol.70
, Issue.4
, pp. 2129-2136
-
-
Tannock, G.W.1
Munro, K.2
Bibiloni, R.3
Simon, M.A.4
Hargreaves, P.5
-
50
-
-
34548178909
-
In-gel digestion for mass spectrometric characterization of proteins and proteomes
-
Shevchenko A, Tomas H, Havlis J, Olsen JV, Mann M, (2006) In-gel digestion for mass spectrometric characterization of proteins and proteomes. Nat Protoc 1 (6): 2856-2860.
-
(2006)
Nat Protoc
, vol.1
, Issue.6
, pp. 2856-2860
-
-
Shevchenko, A.1
Tomas, H.2
Havlis, J.3
Olsen, J.V.4
Mann, M.5
-
51
-
-
7044246160
-
Open mass spectrometry search algorithm
-
Geer LY, Markey SP, Kowalak JA, Wagner L, Xu M, et al. (2004) Open mass spectrometry search algorithm. J Proteome Res 3 (5): 958-964.
-
(2004)
J Proteome Res
, vol.3
, Issue.5
, pp. 958-964
-
-
Geer, L.Y.1
Markey, S.P.2
Kowalak, J.A.3
Wagner, L.4
Xu, M.5
-
52
-
-
33750976398
-
MetaGene: Prokaryotic gene finding from environmental genome shotgun sequences
-
Noguchi H, Park J, Takagi T, (2006) MetaGene: Prokaryotic gene finding from environmental genome shotgun sequences. Nucleic Acids Res 34 (19): 5623-5630.
-
(2006)
Nucleic Acids Res
, vol.34
, Issue.19
, pp. 5623-5630
-
-
Noguchi, H.1
Park, J.2
Takagi, T.3
-
53
-
-
33847630405
-
Target-decoy search strategy for increased confidence in large-scale protein identifications by mass spectrometry
-
Elias JE, Gygi SP, (2007) Target-decoy search strategy for increased confidence in large-scale protein identifications by mass spectrometry. Nat Methods 4 (3): 207-214.
-
(2007)
Nat Methods
, vol.4
, Issue.3
, pp. 207-214
-
-
Elias, J.E.1
Gygi, S.P.2
-
54
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
-
Altschul SF, Madden TL, Schaffer AA, Zhang J, Zhang Z, et al. (1997) Gapped BLAST and PSI-BLAST: A new generation of protein database search programs. Nucleic Acids Res 25 (17): 3389-3402.
-
(1997)
Nucleic Acids Res
, vol.25
, Issue.17
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schaffer, A.A.3
Zhang, J.4
Zhang, Z.5
-
55
-
-
39949084468
-
iPath: interactive exploration of biochemical pathways and networks
-
Letunic I, Yamada T, Kanehisa M, Bork P, (2008) iPath: interactive exploration of biochemical pathways and networks. Trends Biochem Sci 33 (3): 101-103.
-
(2008)
Trends Biochem Sci
, vol.33
, Issue.3
, pp. 101-103
-
-
Letunic, I.1
Yamada, T.2
Kanehisa, M.3
Bork, P.4
-
57
-
-
0344008723
-
Practical regression and ANOVA using R
-
R-project website. Available:. Accessed Jan 10 2011
-
Faraway JJ, (2002) Practical regression and ANOVA using R. R-project website. Available: Http://www.Cran.r-Project.org/doc/contrib/Faraway-PRA.pdf. Accessed Jan 10 2011.
-
(2002)
-
-
Faraway, J.J.1
|