-
1
-
-
70349673839
-
Active demethylation of paternal genome in mammalian zygotes
-
Abdalla H., Yoshizawa Y, Hochi S. 2009. Active demethylation of paternal genome in mammalian zygotes. J Reprod Dev 55: 356-360.
-
(2009)
J Reprod Dev
, vol.55
, pp. 356-360
-
-
Abdalla, H.1
Yoshizawa, Y.2
Hochi, S.3
-
2
-
-
79955778919
-
Human epigenome data reveal increased CpG methylation in alternatively spliced sites and putative exonic splicing enhancers
-
Anastasiadou C., Malousi A, Maglaveras N, Kouidou S. 2011. Human epigenome data reveal increased CpG methylation in alternatively spliced sites and putative exonic splicing enhancers. DNA Cell Biol 30: 267-275.
-
(2011)
DNA Cell Biol
, vol.30
, pp. 267-275
-
-
Anastasiadou, C.1
Malousi, A.2
Maglaveras, N.3
Kouidou, S.4
-
3
-
-
84874816208
-
DNA methylation of distal regulatory sites characterizes dysregulation of cancer genes
-
Aran D., Sabato S, Hellman A. 2013. DNA methylation of distal regulatory sites characterizes dysregulation of cancer genes. Genome Biol 14: R21.
-
(2013)
Genome Biol
, vol.14
-
-
Aran, D.1
Sabato, S.2
Hellman, A.3
-
4
-
-
84863889319
-
In vivo control of CpG and non-CpG DNA methylation by DNA methyltransferases
-
Arand J., Spieler D, Karius T, Branco MR, Meilinger D, Meissner A, Jenuwein T, Xu G, Leonhardt H, Wolf V, et al. 2012. In vivo control of CpG and non-CpG DNA methylation by DNA methyltransferases. PLoS Genet 8: e1002750.
-
(2012)
PLoS Genet
, vol.8
-
-
Arand, J.1
Spieler, D.2
Karius, T.3
Branco, M.R.4
Meilinger, D.5
Meissner, A.6
Jenuwein, T.7
Xu, G.8
Leonhardt, H.9
Wolf, V.10
-
5
-
-
70349104647
-
Genomic imprinting: Employing and avoiding epigenetic processes
-
Bartolomei M.S. 2009. Genomic imprinting: employing and avoiding epigenetic processes. Genes Dev 23: 2124-2133.
-
(2009)
Genes Dev
, vol.23
, pp. 2124-2133
-
-
Bartolomei, M.S.1
-
6
-
-
0024213022
-
Cloning of a mammalian DNA methyltransferase
-
Bestor T.H. 1988. Cloning of a mammalian DNA methyltransferase. Gene 74: 9-12.
-
(1988)
Gene
, vol.74
, pp. 9-12
-
-
Bestor, T.H.1
-
7
-
-
0033753779
-
The DNA methyltransferases of mammals
-
Bestor T.H. 2000. The DNA methyltransferases of mammals. Hum Mol Genet 9: 2395-2402.
-
(2000)
Hum Mol Genet
, vol.9
, pp. 2395-2402
-
-
Bestor, T.H.1
-
8
-
-
78649459828
-
Targets and dynamics of promoter DNA methylation during early mouse development
-
Borgel J., Guibert S, Li Y, Chiba H, Schübeler D, Sasaki H, Forné T, Weber M. 2010. Targets and dynamics of promoter DNA methylation during early mouse development. Nature Publishing Group 42: 1093-1100.
-
(2010)
Nature Publishing Group
, vol.42
, pp. 1093-1100
-
-
Borgel, J.1
Guibert, S.2
Li, Y.3
Chiba, H.4
Schübeler, D.5
Sasaki, H.6
Forné, T.7
Weber, M.8
-
9
-
-
34648833002
-
UHRF1 plays a role in maintaining DNA methylation in mammalian cells
-
Bostick M., Kim JK, Estève P-O, Clark A, Pradhan S, Jacobsen SE. 2007. UHRF1 plays a role in maintaining DNA methylation in mammalian cells. Science 317: 1760-1764.
-
(2007)
Science
, vol.317
, pp. 1760-1764
-
-
Bostick, M.1
Kim, J.K.2
Estève, P.-O.3
Clark, A.4
Pradhan, S.5
Jacobsen, S.E.6
-
10
-
-
4544223707
-
Meiotic catastrophe and retrotransposon reactivation in male germ cells lacking Dnmt3L
-
Bourc'his D, Bestor TH. 2004. Meiotic catastrophe and retrotransposon reactivation in male germ cells lacking Dnmt3L. Nature 431: 96-99.
-
(2004)
Nature
, vol.431
, pp. 96-99
-
-
Bourc'his, D.1
Bestor, T.H.2
-
11
-
-
0035930660
-
Dnmt3L and the establishment of maternal genomic imprints
-
Bourc'his D, Xu GL, Lin CS, Bollman B, Bestor TH. 2001. Dnmt3L and the establishment of maternal genomic imprints. Science 294: 2536-2539.
-
(2001)
Science
, vol.294
, pp. 2536-2539
-
-
Bourc'his, D.1
Xu, G.L.2
Lin, C.S.3
Bollman, B.4
Bestor, T.H.5
-
12
-
-
45349103563
-
Safeguarding parental identity: Dnmt1 maintains imprints during epigenetic reprogramming in early embryogenesis
-
Branco M. R, Oda M, ReikW. 2008. Safeguarding parental identity: Dnmt1 maintains imprints during epigenetic reprogramming in early embryogenesis. Genes Dev 22: 1567-1571.
-
(2008)
Genes Dev
, vol.22
, pp. 1567-1571
-
-
Branco, M.R.1
Oda, M.2
Reik, W.3
-
13
-
-
0028104109
-
Sp1 elements protect a CpG island from de novo methylation
-
Brandeis M., Frank D, Keshet I, Siegfried Z, Mendelsohn M, Nemes A., Temper V, Razin A, Cedar H. 1994. Sp1 elements protect a CpG island from de novo methylation. Nature 371: 435-438.
-
(1994)
Nature
, vol.371
, pp. 435-438
-
-
Brandeis, M.1
Frank, D.2
Keshet, I.3
Siegfried, Z.4
Mendelsohn, M.5
Nemes, A.6
Temper, V.7
Razin, A.8
Cedar, H.9
-
14
-
-
0027096740
-
Properties and localization of DNA methyltransferase in preimplantation mouse embryos: Implications for genomic imprinting
-
Carlson L. L, Page AW, Bestor TH. 1992. Properties and localization of DNA methyltransferase in preimplantation mouse embryos: implications for genomic imprinting. Genes Dev 6: 2536-2541.
-
(1992)
Genes Dev
, vol.6
, pp. 2536-2541
-
-
Carlson, L.L.1
Page, A.W.2
Bestor, T.H.3
-
15
-
-
78650446334
-
Paternally induced transgenerational environmental reprogramming of metabolic gene expression in mammals
-
Carone B. R, Fauquier L, Habib N, Shea JM, Hart CE, Li R, Bock C., Li C, Gu H, Zamore PD, et al. 2010. Paternally induced transgenerational environmental reprogramming of metabolic gene expression in mammals. Cell 143: 1084-1096.
-
(2010)
Cell
, vol.143
, pp. 1084-1096
-
-
Carone, B.R.1
Fauquier, L.2
Habib, N.3
Shea, J.M.4
Hart, C.E.5
Li, R.6
Bock, C.7
Li, C.8
Gu, H.9
Zamore, P.D.10
-
16
-
-
0037168587
-
The DNA methyltransferase-like protein DNMT3L stimulates de novo methylation by Dnmt3a
-
Chedin F., Lieber MR, Hsieh C-L. 2002. The DNA methyltransferase-like protein DNMT3L stimulates de novo methylation by Dnmt3a. Proc Natl Acad Sci 99: 16916-16921.
-
(2002)
Proc Natl Acad Sci
, vol.99
, pp. 16916-16921
-
-
Chedin, F.1
Lieber, M.R.2
Hsieh, C.-L.3
-
17
-
-
2642551522
-
Structure and function of eukaryotic DNA methyltransferases
-
Chen T., Li E. 2004. Structure and function of eukaryotic DNA methyltransferases. Curr Top Dev Biol 60: 55-89.
-
(2004)
Curr Top Dev Biol
, vol.60
, pp. 55-89
-
-
Chen, T.1
Li, E.2
-
18
-
-
40149110698
-
X chromosome activity in mouse XX primordial germ cells
-
Chuva de Sousa Lopes SM, Hayashi K, Shovlin TC, Mifsud W, Surani M. A, McLaren A. 2008. X chromosome activity in mouse XX primordial germ cells. PLoS Genet 4: e30.
-
(2008)
PLoS Genet
, vol.4
-
-
Chuva de Sousa Lopes, S.M.1
Hayashi, K.2
Shovlin, T.C.3
Mifsud, W.4
Surani, M.A.5
McLaren, A.6
-
19
-
-
40749127618
-
Preimplantation expression of the somatic form of Dnmt1 suggests a role in the inheritance of genomic imprints
-
Cirio M. C, Ratnam S, Ding F, Reinhart B, Navara C, Chaillet JR. 2008. Preimplantation expression of the somatic form of Dnmt1 suggests a role in the inheritance of genomic imprints. BMC Dev Biol 8: 9.
-
(2008)
BMC Dev Biol
, vol.8
, pp. 9
-
-
Cirio, M.C.1
Ratnam, S.2
Ding, F.3
Reinhart, B.4
Navara, C.5
Chaillet, J.R.6
-
20
-
-
79957577720
-
Primate CpG islands are maintained by heterogeneous evolutionary regimes involving minimal selection
-
Cohen N. M, Kenigsberg E, Tanay A. 2011. Primate CpG islands are maintained by heterogeneous evolutionary regimes involving minimal selection. Cell 145: 773-786.
-
(2011)
Cell
, vol.145
, pp. 773-786
-
-
Cohen, N.M.1
Kenigsberg, E.2
Tanay, A.3
-
21
-
-
79959937861
-
Thymine DNA glycosylase is essential for active DNA demethylation by linked deamination-base excision repair
-
Cortellino S., Xu J, Sannai M, Moore R, Caretti E, Cigliano A, Le Coz M., Devarajan K, Wessels A, Soprano D, et al. 2011. Thymine DNA glycosylase is essential for active DNA demethylation by linked deamination-base excision repair. Cell 146: 67-79.
-
(2011)
Cell
, vol.146
, pp. 67-79
-
-
Cortellino, S.1
Xu, J.2
Sannai, M.3
Moore, R.4
Caretti, E.5
Cigliano, A.6
Le Coz, M.7
Devarajan, K.8
Wessels, A.9
Soprano, D.10
-
22
-
-
0034703865
-
The H19 methylation imprint is erased and re-established differentially on the parental alleles during male germ cell development
-
Davis T. L, Yang GJ, McCarrey JR, Bartolomei MS. 2000. The H19 methylation imprint is erased and re-established differentially on the parental alleles during male germ cell development. Hum Mol Genet 9: 2885-2894.
-
(2000)
Hum Mol Genet
, vol.9
, pp. 2885-2894
-
-
Davis, T.L.1
Yang, G.J.2
McCarrey, J.R.3
Bartolomei, M.S.4
-
23
-
-
79961139741
-
Tet1 is dispensable for maintaining pluripotency and its loss is compatible with embryonic and postnatal development
-
Dawlaty M. M, Ganz K, Powell BE, Hu Y-C, Markoulaki S, Cheng AW, Gao Q, Kim J, Choi S-W, Page DC, et al. 2011. Tet1 is dispensable for maintaining pluripotency and its loss is compatible with embryonic and postnatal development. Cell Stem Cell 9: 166-175.
-
(2011)
Cell Stem Cell
, vol.9
, pp. 166-175
-
-
Dawlaty, M.M.1
Ganz, K.2
Powell, B.E.3
Hu, Y.-C.4
Markoulaki, S.5
Cheng, A.W.6
Gao, Q.7
Kim, J.8
Choi, S.-W.9
Page, D.C.10
-
24
-
-
84873707539
-
Combined deficiency of Tet1 and Tet2 causes epigenetic abnormalities but is compatible with postnatal development
-
Dawlaty M. M, Breiling A, Le T, Raddatz G, Barrasa MI, Cheng AW, Gao Q., Powell BE, Li Z, XuM, et al. 2013. Combined deficiency of Tet1 and Tet2 causes epigenetic abnormalities but is compatible with postnatal development. Dev Cell 24: 310-323.
-
(2013)
Dev Cell
, vol.24
, pp. 310-323
-
-
Dawlaty, M.M.1
Breiling, A.2
Le, T.3
Raddatz, G.4
Barrasa, M.I.5
Cheng, A.W.6
Gao, Q.7
Powell, B.E.8
Li, Z.9
Xu, M.10
-
25
-
-
79956330964
-
CpG islands and the regulation of transcription
-
Deaton A. M, Bird A. 2011. CpG islands and the regulation of transcription. Genes Dev 25: 1010-1022.
-
(2011)
Genes Dev
, vol.25
, pp. 1010-1022
-
-
Deaton, A.M.1
Bird, A.2
-
26
-
-
0037069403
-
In vivo stabilization of the Dnmt1 (cytosine-5)-methyltransferase protein
-
Ding F., Chaillet JR. 2002. In vivo stabilization of the Dnmt1 (cytosine-5)-methyltransferase protein. Proc Natl Acad Sci 99: 14861-14866.
-
(2002)
Proc Natl Acad Sci
, vol.99
, pp. 14861-14866
-
-
Ding, F.1
Chaillet, J.R.2
-
27
-
-
44949221144
-
MLL protects CpG clusters from methylation within the Hoxa9 gene, maintaining transcript expression
-
Erfurth F. E, Popovic R, Grembecka J, Cierpicki T, Theisler C, Xia Z-B, Stuart T, Diaz MO, Bushweller JH, Zeleznik-Le NJ. 2008. MLL protects CpG clusters from methylation within the Hoxa9 gene, maintaining transcript expression. Proc Natl Acad Sci 105: 7517-7522.
-
(2008)
Proc Natl Acad Sci
, vol.105
, pp. 7517-7522
-
-
Erfurth, F.E.1
Popovic, R.2
Grembecka, J.3
Cierpicki, T.4
Theisler, C.5
Xia, Z.-B.6
Stuart, T.7
Diaz, M.O.8
Bushweller, J.H.9
Zeleznik-Le, N.J.10
-
28
-
-
45349086923
-
Global mapping of DNA methylation in mouse promoters reveals epigenetic reprogramming of pluripotency genes
-
Farthing C. R, Ficz G, Ng RK, Chan C-F, Andrews S, Dean W, Hemberger M., Reik W. 2008. Global mapping of DNA methylation in mouse promoters reveals epigenetic reprogramming of pluripotency genes. PLoS Genet 4: e1000116.
-
(2008)
PLoS Genet
, vol.4
-
-
Farthing, C.R.1
Ficz, G.2
Ng, R.K.3
Chan, C.-F.4
Andrews, S.5
Dean, W.6
Hemberger, M.7
Reik, W.8
-
29
-
-
78049414227
-
Epigenetic reprogramming in plant and animal development
-
Feng S., Jacobsen SE, Reik W. 2010. Epigenetic reprogramming in plant and animal development. Science 330: 622-627.
-
(2010)
Science
, vol.330
, pp. 622-627
-
-
Feng, S.1
Jacobsen, S.E.2
Reik, W.3
-
30
-
-
79960530899
-
Genomic imprinting: The emergence of an epigenetic paradigm
-
Ferguson-Smith AC. 2011. Genomic imprinting: the emergence of an epigenetic paradigm. Nat Rev Genet 12: 565-575.
-
(2011)
Nat Rev Genet
, vol.12
, pp. 565-575
-
-
Ferguson-Smith, A.C.1
-
31
-
-
11144285884
-
DNA methylation pattern in human zygotes and developing embryos
-
Fulka H., Mrazek M, Tepla O, Fulka J. 2004. DNA methylation pattern in human zygotes and developing embryos. Reproduction 128: 703-708.
-
(2004)
Reproduction
, vol.128
, pp. 703-708
-
-
Fulka, H.1
Mrazek, M.2
Tepla, O.3
Fulka, J.4
-
32
-
-
0032483988
-
A short DNA methyltransferase isoform restores methylation in vivo
-
Gaudet F., Talbot D, Leonhardt H, Jaenisch R. 1998. A short DNA methyltransferase isoform restores methylation in vivo. J Biol Chem 273: 32725-32729.
-
(1998)
J Biol Chem
, vol.273
, pp. 32725-32729
-
-
Gaudet, F.1
Talbot, D.2
Leonhardt, H.3
Jaenisch, R.4
-
33
-
-
31144449613
-
Methylation of tRNAAsp by the DNA methyltransferase homolog Dnmt2
-
Goll M. G, Kirpekar F, Maggert KA, Yoder JA, Hsieh C-L, Zhang X, Golic KG, Jacobsen SE, Bestor TH. 2006. Methylation of tRNAAsp by the DNA methyltransferase homolog Dnmt2. Science 311: 395-398.
-
(2006)
Science
, vol.311
, pp. 395-398
-
-
Goll, M.G.1
Kirpekar, F.2
Maggert, K.A.3
Yoder, J.A.4
Hsieh, C.-L.5
Zhang, X.6
Golic, K.G.7
Jacobsen, S.E.8
Bestor, T.H.9
-
34
-
-
68749117667
-
DNMT3B interacts with constitutive centromere protein CENP-C to modulate DNA methylation and the histone code at centromeric regions
-
Gopalakrishnan S., Sullivan BA, Trazzi S, Valle Della G, Robertson KD. 2009. DNMT3B interacts with constitutive centromere protein CENP-C to modulate DNA methylation and the histone code at centromeric regions. Hum Mol Genet 18: 3178-3193.
-
(2009)
Hum Mol Genet
, vol.18
, pp. 3178-3193
-
-
Gopalakrishnan, S.1
Sullivan, B.A.2
Trazzi, S.3
Valle Della, G.4
Robertson, K.D.5
-
35
-
-
17144369504
-
Mechanism of stimulation of catalytic activity of Dnmt3A and Dnmt3B DNA-(cytosine-C5)-methyltransferases by Dnmt3L
-
Gowher H., Liebert K, Hermann A, Xu G, Jeltsch A. 2005. Mechanism of stimulation of catalytic activity of Dnmt3A and Dnmt3B DNA-(cytosine-C5)-methyltransferases by Dnmt3L. J Biol Chem 280: 13341-13348.
-
(2005)
J Biol Chem
, vol.280
, pp. 13341-13348
-
-
Gowher, H.1
Liebert, K.2
Hermann, A.3
Xu, G.4
Jeltsch, A.5
-
36
-
-
80053348585
-
The role of Tet3 DNA dioxygenase in epigenetic reprogramming by oocytes
-
Gu T-P, Guo F, Yang H, Wu H-P, Xu G-F, Liu W, Xie Z-G, Shi L, He X., Jin S-G, et al. 2011. The role of Tet3 DNA dioxygenase in epigenetic reprogramming by oocytes. Nature 477: 606-610.
-
(2011)
Nature
, vol.477
, pp. 606-610
-
-
Gu, T.-P.1
Guo, F.2
Yang, H.3
Wu, H.-P.4
Xu, G.-F.5
Liu, W.6
Xie, Z.-G.7
Shi, L.8
He, X.9
Jin, S.-G.10
-
37
-
-
84871422874
-
Epigenetics: Erase for a new start
-
Guibert S., Weber M. 2012. Epigenetics: erase for a new start. Nature 492: 363-364.
-
(2012)
Nature
, vol.492
, pp. 363-364
-
-
Guibert, S.1
Weber, M.2
-
38
-
-
84872770694
-
Germline DNA demethylation dynamics and imprint erasure through 5-hydroxymethylcytosine
-
Hackett J. A, Sengupta R, Zylicz JJ, Murakami K, Lee C, Down TA, Surani MA. 2013. Germline DNA demethylation dynamics and imprint erasure through 5-hydroxymethylcytosine. Science 339: 448-452.
-
(2013)
Science
, vol.339
, pp. 448-452
-
-
Hackett, J.A.1
Sengupta, R.2
Zylicz, J.J.3
Murakami, K.4
Lee, C.5
Down, T.A.6
Surani, M.A.7
-
39
-
-
77954816725
-
Epigenetic reprogramming-taking a lesson from the embryo
-
Hajkova P. 2010. Epigenetic reprogramming-taking a lesson from the embryo. Curr Opin Cell Biol 22: 342-350.
-
(2010)
Curr Opin Cell Biol
, vol.22
, pp. 342-350
-
-
Hajkova, P.1
-
40
-
-
0036768615
-
Epigenetic reprogramming in mouse primordial germ cells
-
Hajkova P., Erhardt S, Lane N, Haaf T, El-Maarri O, Reik W, Walter J., Surani MA. 2002. Epigenetic reprogramming in mouse primordial germ cells. Mech Dev 117: 15-23.
-
(2002)
Mech Dev
, vol.117
, pp. 15-23
-
-
Hajkova, P.1
Erhardt, S.2
Lane, N.3
Haaf, T.4
El-Maarri, O.5
Reik, W.6
Walter, J.7
Surani, M.A.8
-
41
-
-
42249094716
-
Chromatin dynamics during epigenetic reprogramming in the mouse germ line
-
Hajkova P., Ancelin K, Waldmann T, Lacoste N, Lange UC, Cesari F., Lee C, Almouzni G, Schneider R, Surani MA. 2008. Chromatin dynamics during epigenetic reprogramming in the mouse germ line. Nature 452: 877-881.
-
(2008)
Nature
, vol.452
, pp. 877-881
-
-
Hajkova, P.1
Ancelin, K.2
Waldmann, T.3
Lacoste, N.4
Lange, U.C.5
Cesari, F.6
Lee, C.7
Almouzni, G.8
Schneider, R.9
Surani, M.A.10
-
42
-
-
77954345408
-
Genome-wide reprogramming in the mouse germ line entails the base excision repair pathway
-
Hajkova P., Jeffries SJ, Lee C, Miller N, Jackson SP, Surani MA. 2010. Genome-wide reprogramming in the mouse germ line entails the base excision repair pathway. Science 329: 78-82.
-
(2010)
Science
, vol.329
, pp. 78-82
-
-
Hajkova, P.1
Jeffries, S.J.2
Lee, C.3
Miller, N.4
Jackson, S.P.5
Surani, M.A.6
-
43
-
-
84860221291
-
Recognition and potential mechanisms for replication and erasure of cytosine hydroxymethylation
-
Hashimoto H., Liu Y, Upadhyay AK, Chang Y, Howerton SB, Vertino P. M, Zhang X, Cheng X. 2012. Recognition and potential mechanisms for replication and erasure of cytosine hydroxymethylation. Nucleic Acids Res 40: 4841-4849.
-
(2012)
Nucleic Acids Res
, vol.40
, pp. 4841-4849
-
-
Hashimoto, H.1
Liu, Y.2
Upadhyay, A.K.3
Chang, Y.4
Howerton, S.B.5
Vertino, P.M.6
Zhang, X.7
Cheng, X.8
-
44
-
-
0036333103
-
Dnmt3L cooperates with the Dnmt3 family of de novo DNA methyltransferases to establish maternal imprints in mice
-
Hata K., Okano M, Lei H, Li E. 2002. Dnmt3L cooperates with the Dnmt3 family of de novo DNA methyltransferases to establish maternal imprints in mice. Development 129: 1983-1993.
-
(2002)
Development
, vol.129
, pp. 1983-1993
-
-
Hata, K.1
Okano, M.2
Lei, H.3
Li, E.4
-
46
-
-
80052495940
-
Tet-mediated formation of 5-carboxylcytosine and its excision by TDG in mammalian DNA
-
He Y-F, Li B-Z, Li Z, Liu P, Wang Y, Tang Q, Ding J, Jia Y, Chen Z, Li L, et al. 2011. Tet-mediated formation of 5-carboxylcytosine and its excision by TDG in mammalian DNA. Science 333: 1303-1307.
-
(2011)
Science
, vol.333
, pp. 1303-1307
-
-
He, Y.-F.1
Li, B.-Z.2
Li, Z.3
Liu, P.4
Wang, Y.5
Tang, Q.6
Ding, J.7
Jia, Y.8
Chen, Z.9
Li, L.10
-
47
-
-
33847304609
-
Gene body-specific methylation on the active X chromosome
-
Hellman A., Chess A. 2007. Gene body-specific methylation on the active X chromosome. Science 315: 1141-1143.
-
(2007)
Science
, vol.315
, pp. 1141-1143
-
-
Hellman, A.1
Chess, A.2
-
48
-
-
69449092535
-
Histone methylation is mechanistically linked to DNA methylation at imprinting control regions in mammals
-
Henckel A., Nakabayashi K, Sanz LA, Feil R, Hata K, Arnaud P. 2009. Histone methylation is mechanistically linked to DNA methylation at imprinting control regions in mammals. Hum Mol Genet 18: 3375-3383.
-
(2009)
Hum Mol Genet
, vol.18
, pp. 3375-3383
-
-
Henckel, A.1
Nakabayashi, K.2
Sanz, L.A.3
Feil, R.4
Hata, K.5
Arnaud, P.6
-
49
-
-
45349108598
-
Maternal and zygotic Dnmt1 are necessary and sufficient for the maintenance of DNA methylation imprints during preimplantation development
-
Hirasawa R., Chiba H, Kaneda M, Tajima S, Li E, Jaenisch R, Sasaki H. 2008. Maternal and zygotic Dnmt1 are necessary and sufficient for the maintenance of DNA methylation imprints during preimplantation development. Genes Dev 22: 1607-1616.
-
(2008)
Genes Dev
, vol.22
, pp. 1607-1616
-
-
Hirasawa, R.1
Chiba, H.2
Kaneda, M.3
Tajima, S.4
Li, E.5
Jaenisch, R.6
Sasaki, H.7
-
50
-
-
0023920962
-
De novo and maintenance DNA methylation by a mouse plasmacytoma cell DNA methyltransferase
-
Hitt M. M, Wu TL, Cohen G, Linn S. 1988. De novo and maintenance DNA methylation by a mouse plasmacytoma cell DNA methyltransferase. J Biol Chem 263: 4392-4399.
-
(1988)
J Biol Chem
, vol.263
, pp. 4392-4399
-
-
Hitt, M.M.1
Wu, T.L.2
Cohen, G.3
Linn, S.4
-
51
-
-
69749092741
-
High definition profiling of mammalian DNA methylation by array capture and single molecule bisulfite sequencing
-
Hodges E., Smith AD, Kendall J, Xuan Z, Ravi K, Rooks M, Zhang M. Q, Ye K, Bhattacharjee A, Brizuela L, et al. 2009. High definition profiling of mammalian DNA methylation by array capture and single molecule bisulfite sequencing. Genome Res 19: 1593-1605.
-
(2009)
Genome Res
, vol.19
, pp. 1593-1605
-
-
Hodges, E.1
Smith, A.D.2
Kendall, J.3
Xuan, Z.4
Ravi, K.5
Rooks, M.6
Zhang, M.Q.7
Ye, K.8
Bhattacharjee, A.9
Brizuela, L.10
-
52
-
-
0016439429
-
DNA modification mechanisms and gene activity during development
-
Holliday R., Pugh JE. 1975. DNA modification mechanisms and gene activity during development. Science 187: 226-232.
-
(1975)
Science
, vol.187
, pp. 226-232
-
-
Holliday, R.1
Pugh, J.E.2
-
53
-
-
0035937404
-
Genomic imprinting disrupted by a maternal effect mutation in the Dnmt1 gene
-
Howell C. Y, Bestor TH, Ding F, Latham KE, Mertineit C, Trasler JM, Chaillet JR. 2001. Genomic imprinting disrupted by a maternal effect mutation in the Dnmt1 gene. Cell 104: 829-838.
-
(2001)
Cell
, vol.104
, pp. 829-838
-
-
Howell, C.Y.1
Bestor, T.H.2
Ding, F.3
Latham, K.E.4
Mertineit, C.5
Trasler, J.M.6
Chaillet, J.R.7
-
54
-
-
80054097425
-
Replication-dependent loss of 5-hydroxymethylcytosine in mouse preimplantation embryos
-
Inoue A., Zhang Y. 2011. Replication-dependent loss of 5-hydroxymethylcytosine in mouse preimplantation embryos. Science 334: 194.
-
(2011)
Science
, vol.334
, pp. 194
-
-
Inoue, A.1
Zhang, Y.2
-
55
-
-
82655187105
-
Generation and replication-dependent dilution of 5fC and 5caC during mouse preimplantation development
-
Inoue A., Shen L, Dai Q, He C, Zhang Y. 2011. Generation and replication-dependent dilution of 5fC and 5caC during mouse preimplantation development. Cell Res 21: 1670-1676.
-
(2011)
Cell Res
, vol.21
, pp. 1670-1676
-
-
Inoue, A.1
Shen, L.2
Dai, Q.3
He, C.4
Zhang, Y.5
-
56
-
-
79952763586
-
Reprogramming of the paternal genome upon fertilization involves genomewide oxidation of 5-methylcytosine
-
Iqbal K., Jin S-G, Pfeifer GP, Szabó PE. 2011. Reprogramming of the paternal genome upon fertilization involves genomewide oxidation of 5-methylcytosine. Proc Natl Acad Sci 108: 3642-3647.
-
(2011)
Proc Natl Acad Sci
, vol.108
, pp. 3642-3647
-
-
Iqbal, K.1
Jin, S.-G.2
Pfeifer, G.P.3
Szabó, P.E.4
-
57
-
-
77956189495
-
Role of Tet proteins in 5mC to 5hmC conversion, EScell self-renewal and inner cell mass specification
-
Ito S., D'Alessio AC, Taranova OV, Hong K, Sowers LC, Zhang Y. 2010. Role of Tet proteins in 5mC to 5hmC conversion, EScell self-renewal and inner cell mass specification. Nature 466: 1129-1133.
-
(2010)
Nature
, vol.466
, pp. 1129-1133
-
-
Ito, S.1
D'Alessio, A.C.2
Taranova, O.V.3
Hong, K.4
Sowers, L.C.5
Zhang, Y.6
-
58
-
-
80052461558
-
Tet proteins can convert 5-methylcytosine to 5-formylcytosine and 5-carboxylcytosine
-
Ito S., Shen L, Dai Q, Wu SC, Collins LB, Swenberg JA, He C, Zhang Y. 2011. Tet proteins can convert 5-methylcytosine to 5-formylcytosine and 5-carboxylcytosine. Science 333: 1300-1303.
-
(2011)
Science
, vol.333
, pp. 1300-1303
-
-
Ito, S.1
Shen, L.2
Dai, Q.3
Wu, S.C.4
Collins, L.B.5
Swenberg, J.A.6
He, C.7
Zhang, Y.8
-
59
-
-
79960677839
-
KAP1 protein: An enigmatic master regulator of the genome
-
Iyengar S., Farnham PJ. 2011. KAP1 protein: an enigmatic master regulator of the genome. J Biol Chem 286: 26267-26276.
-
(2011)
J Biol Chem
, vol.286
, pp. 26267-26276
-
-
Iyengar, S.1
Farnham, P.J.2
-
60
-
-
34548603504
-
Structure of Dnmt3a bound to Dnmt3L suggests a model for de novo DNA methylation
-
Jia D., Jurkowska RZ, Zhang X, Jeltsch A, Cheng X. 2007. Structure of Dnmt3a bound to Dnmt3L suggests a model for de novo DNA methylation. Nature 449: 248-251.
-
(2007)
Nature
, vol.449
, pp. 248-251
-
-
Jia, D.1
Jurkowska, R.Z.2
Zhang, X.3
Jeltsch, A.4
Cheng, X.5
-
61
-
-
39749152283
-
DNA methyltransferase 3B (DNMT3B) mutations in ICF syndrome lead to altered epigenetic modifications and aberrant expression of genes regulating development, neurogenesis and immune function
-
Jin B., Tao Q, Peng J, Soo HM, Wu W, Ying J, Fields CR, Delmas AL, Liu X, Qiu J, et al. 2008. DNA methyltransferase 3B (DNMT3B) mutations in ICF syndrome lead to altered epigenetic modifications and aberrant expression of genes regulating development, neurogenesis and immune function. Hum Mol Genet 17: 690-709.
-
(2008)
Hum Mol Genet
, vol.17
, pp. 690-709
-
-
Jin, B.1
Tao, Q.2
Peng, J.3
Soo, H.M.4
Wu, W.5
Ying, J.6
Fields, C.R.7
Delmas, A.L.8
Liu, X.9
Qiu, J.10
-
62
-
-
84873570094
-
Replication-coupled passive DNA demethylation for the erasure of genome imprints in mice
-
Kagiwada S., Kurimoto K, Hirota T, Yamaji M, Saitou M. 2013. Replication-coupled passive DNA demethylation for the erasure of genome imprints in mice. EMBO J 32: 340-353.
-
(2013)
EMBO J
, vol.32
, pp. 340-353
-
-
Kagiwada, S.1
Kurimoto, K.2
Hirota, T.3
Yamaji, M.4
Saitou, M.5
-
63
-
-
3042584653
-
Essential role for de novo DNA methyltransferase Dnmt3a in paternal and maternal imprinting
-
Kaneda M., Okano M, Hata K, Sado T, Tsujimoto N, Li E, Sasaki H. 2004. Essential role for de novo DNA methyltransferase Dnmt3a in paternal and maternal imprinting. Nature 429: 900-903.
-
(2004)
Nature
, vol.429
, pp. 900-903
-
-
Kaneda, M.1
Okano, M.2
Hata, K.3
Sado, T.4
Tsujimoto, N.5
Li, E.6
Sasaki, H.7
-
64
-
-
34548705374
-
Role of the Dnmt3 family in de novo methylation of imprinted and repetitive sequences during male germ cell development in the mouse
-
Kato Y., Kaneda M, Hata K, Kumaki K, Hisano M, Kohara Y, Okano M., Li E, Nozaki M, Sasaki H. 2007. Role of the Dnmt3 family in de novo methylation of imprinted and repetitive sequences during male germ cell development in the mouse. Hum Mol Genet 16: 2272-2280.
-
(2007)
Hum Mol Genet
, vol.16
, pp. 2272-2280
-
-
Kato, Y.1
Kaneda, M.2
Hata, K.3
Kumaki, K.4
Hisano, M.5
Kohara, Y.6
Okano, M.7
Li, E.8
Nozaki, M.9
Sasaki, H.10
-
65
-
-
84876580247
-
New insights into establishment and maintenance of DNA methylation imprints in mammals
-
Kelsey G., Feil R. 2013. New insights into establishment and maintenance of DNA methylation imprints in mammals. Philos Trans R Soc Lond B Biol Sci 368: 20110336.
-
(2013)
Philos Trans R Soc Lond B Biol Sci
, vol.368
, pp. 20110336
-
-
Kelsey, G.1
Feil, R.2
-
66
-
-
0142243222
-
Control elements of Dnmt1 gene are regulated in cellcycle dependent manner
-
Kishikawa S., Murata T, Ugai H, Yamazaki T, Yokoyama KK. 2003. Control elements of Dnmt1 gene are regulated in cellcycle dependent manner. Nucleic Acids Res3: 307-308.
-
(2003)
Nucleic Acids Res
, vol.3
, pp. 307-308
-
-
Kishikawa, S.1
Murata, T.2
Ugai, H.3
Yamazaki, T.4
Yokoyama, K.K.5
-
67
-
-
84857467013
-
Contribution of intragenic DNA methylation in mouse gametic DNA methylomes to establish oocyte-specific heritable marks
-
Kobayashi H., Sakurai T, Imai M, Takahashi N, Fukuda A, Yayoi O, Sato S, Nakabayashi K, Hata K, Sotomaru Y, et al. 2012. Contribution of intragenic DNA methylation in mouse gametic DNA methylomes to establish oocyte-specific heritable marks. PLoS Genet 8: e1002440.
-
(2012)
PLoS Genet
, vol.8
-
-
Kobayashi, H.1
Sakurai, T.2
Imai, M.3
Takahashi, N.4
Fukuda, A.5
Yayoi, O.6
Sato, S.7
Nakabayashi, K.8
Hata, K.9
Sotomaru, Y.10
-
68
-
-
84875990411
-
High-resolution DNA methylome analysis of primordial germ cells identifies gender-specific reprogramming in mice
-
Kobayashi H., Sakurai T, Miura F, Imai M, Mochiduki K, Yanagisawa E., Sakashita A, Wakai T, Suzuki Y, Ito T, et al. 2013. High-resolution DNA methylome analysis of primordial germ cells identifies gender-specific reprogramming in mice. Genome Res 23: 616-627.
-
(2013)
Genome Res
, vol.23
, pp. 616-627
-
-
Kobayashi, H.1
Sakurai, T.2
Miura, F.3
Imai, M.4
Mochiduki, K.5
Yanagisawa, E.6
Sakashita, A.7
Wakai, T.8
Suzuki, Y.9
Ito, T.10
-
69
-
-
84877930005
-
DNA methylation and methylcytosine oxidation in cell fate decisions
-
Koh K. P, Rao A. 2013. DNA methylation and methylcytosine oxidation in cell fate decisions. Curr Opin Cell Biol 25: 152-161.
-
(2013)
Curr Opin Cell Biol
, vol.25
, pp. 152-161
-
-
Koh, K.P.1
Rao, A.2
-
70
-
-
78149474587
-
Epigenetic transitionsin germ cell development and meiosis
-
Kota S. K, Feil R. 2010. Epigenetic transitionsin germ cell development and meiosis. Dev Cell 19: 675-686.
-
(2010)
Dev Cell
, vol.19
, pp. 675-686
-
-
Kota, S.K.1
Feil, R.2
-
71
-
-
37349045107
-
Maintenance of genomic methylation patterns during preimplantation development requires the somatic form of DNA methyltransferase 1
-
Kurihara Y., Kawamura Y, Uchijima Y, Amamo T, Kobayashi H, Asano T., Kurihara H. 2008. Maintenance of genomic methylation patterns during preimplantation development requires the somatic form of DNA methyltransferase 1. Dev Biol 313: 335-346.
-
(2008)
Dev Biol
, vol.313
, pp. 335-346
-
-
Kurihara, Y.1
Kawamura, Y.2
Uchijima, Y.3
Amamo, T.4
Kobayashi, H.5
Asano, T.6
Kurihara, H.7
-
72
-
-
45349107280
-
Complex genome-wide transcription dynamics orchestrated by Blimp1 for the specification of the germ cell lineage in mice
-
Kurimoto K., Yabuta Y, Ohinata Y, Shigeta M, Yamanaka K, Saitou M. 2008. Complex genome-wide transcription dynamics orchestrated by Blimp1 for the specification of the germ cell lineage in mice. Genes Dev 22: 1617-1635.
-
(2008)
Genes Dev
, vol.22
, pp. 1617-1635
-
-
Kurimoto, K.1
Yabuta, Y.2
Ohinata, Y.3
Shigeta, M.4
Yamanaka, K.5
Saitou, M.6
-
73
-
-
2042437650
-
Initial sequencing and analysis of the human genome
-
Lander E. S, Linton LM, Birren B, Nusbaum C, Zody MC, Baldwin J, Devon K, Dewar K, Doyle M, FitzHugh W, et al. 2001. Initial sequencing and analysis of the human genome. Nature 409: 860-921.
-
(2001)
Nature
, vol.409
, pp. 860-921
-
-
Lander, E.S.1
Linton, L.M.2
Birren, B.3
Nusbaum, C.4
Zody, M.C.5
Baldwin, J.6
Devon, K.7
Dewar, K.8
Doyle, M.9
FitzHugh, W.10
-
74
-
-
0036333598
-
Erasing genomic imprinting memory in mouse clone embryos produced from day 11.5 primordial germ cells
-
Lee J., Inoue K, Ono R, Ogonuki N, Kohda T, Kaneko-Ishino T, Ogura A., Ishino F. 2002. Erasing genomic imprinting memory in mouse clone embryos produced from day 11.5 primordial germ cells. Development 129: 1807-1817.
-
(2002)
Development
, vol.129
, pp. 1807-1817
-
-
Lee, J.1
Inoue, K.2
Ono, R.3
Ogonuki, N.4
Kohda, T.5
Kaneko-Ishino, T.6
Ogura, A.7
Ishino, F.8
-
75
-
-
0029803192
-
De novo DNA cytosine methyltransferase activities in mouse embryonic stem cells
-
Lei H., Oh SP, Okano M, Jüttermann R, Goss KA, Jaenisch R, Li E. 1996. De novo DNA cytosine methyltransferase activities in mouse embryonic stem cells. Development 122: 3195-3205.
-
(1996)
Development
, vol.122
, pp. 3195-3205
-
-
Lei, H.1
Oh, S.P.2
Okano, M.3
Jüttermann, R.4
Goss, K.A.5
Jaenisch, R.6
Li, E.7
-
76
-
-
0026439115
-
A targeting sequence directs DNA methyltransferase to sites of DNA replication in mammalian nuclei
-
Leonhardt H., Page AW, Weier HU, Bestor TH. 1992. A targeting sequence directs DNA methyltransferase to sites of DNA replication in mammalian nuclei. Cell 71: 865-873.
-
(1992)
Cell
, vol.71
, pp. 865-873
-
-
Leonhardt, H.1
Page, A.W.2
Weier, H.U.3
Bestor, T.H.4
-
77
-
-
0026708177
-
Targeted mutation of the DNA methyltransferase gene results in embryonic lethality
-
Li E., Bestor TH, Jaenisch R. 1992. Targeted mutation of the DNA methyltransferase gene results in embryonic lethality. Cell 69: 915-926.
-
(1992)
Cell
, vol.69
, pp. 915-926
-
-
Li, E.1
Bestor, T.H.2
Jaenisch, R.3
-
78
-
-
0027378582
-
Role for DNA methylation in genomic imprinting
-
Li E., Beard C, Jaenisch R. 1993. Role for DNA methylation in genomic imprinting. Nature 366: 362-365.
-
(1993)
Nature
, vol.366
, pp. 362-365
-
-
Li, E.1
Beard, C.2
Jaenisch, R.3
-
79
-
-
53249098795
-
A maternal-zygotic effect gene, Zfp57, maintains both maternal and paternal imprints
-
Li X., Ito M, Zhou F, Youngson N, Zuo X, Leder P, Ferguson-Smith A.C. 2008. A maternal-zygotic effect gene, Zfp57, maintains both maternal and paternal imprints. Dev Cell 15: 547-557.
-
(2008)
Dev Cell
, vol.15
, pp. 547-557
-
-
Li, X.1
Ito, M.2
Zhou, F.3
Youngson, N.4
Zuo, X.5
Leder, P.6
Ferguson-Smith, A.C.7
-
80
-
-
80052285127
-
Deletion of Tet2 in mice leads to dysregulated hematopoietic stem cells and subsequent development of myeloid malignancies
-
Li Z., Cai X, Cai C-L, Wang J, Zhang W, Petersen BE, Yang F-C, Xu M. 2011. Deletion of Tet2 in mice leads to dysregulated hematopoietic stem cells and subsequent development of myeloid malignancies. Blood 118: 4509-4518.
-
(2011)
Blood
, vol.118
, pp. 4509-4518
-
-
Li, Z.1
Cai, X.2
Cai, C.-L.3
Wang, J.4
Zhang, W.5
Petersen, B.E.6
Yang, F.-C.7
Xu, M.8
-
81
-
-
80054994283
-
Identification of genetic elements that autonomously determine DNA methylation states
-
Lienert F., Wirbelauer C, Som I, Dean A, Mohn F, Schübeler D. 2011. Identification of genetic elements that autonomously determine DNA methylation states. Nat Genet 43: 1091-1097.
-
(2011)
Nat Genet
, vol.43
, pp. 1091-1097
-
-
Lienert, F.1
Wirbelauer, C.2
Som, I.3
Dean, A.4
Mohn, F.5
Schübeler, D.6
-
82
-
-
84868556202
-
An atomic model of Zfp57 recognition of CpG methylation within a specific DNA sequence
-
Liu Y., Toh H, Sasaki H, Zhang X, Cheng X. 2012. An atomic model of Zfp57 recognition of CpG methylation within a specific DNA sequence. Genes Dev 26: 2374-2379.
-
(2012)
Genes Dev
, vol.26
, pp. 2374-2379
-
-
Liu, Y.1
Toh, H.2
Sasaki, H.3
Zhang, X.4
Cheng, X.5
-
83
-
-
84883474570
-
Singlecell DNA-methylation analysis reveals epigenetic chimerism in preimplantation embryos
-
Lorthongpanich C., Cheow LF, Balu S, Quake SR, Knowles BB, Burkholder W. F, Solter D, Messerschmidt DM. 2013. Singlecell DNA-methylation analysis reveals epigenetic chimerism in preimplantation embryos. Science 341: 1110-1112.
-
(2013)
Science
, vol.341
, pp. 1110-1112
-
-
Lorthongpanich, C.1
Cheow, L.F.2
Balu, S.3
Quake, S.R.4
Knowles, B.B.5
Burkholder, W.F.6
Solter, D.7
Messerschmidt, D.M.8
-
84
-
-
33749396836
-
DNA methylation is a primary mechanism for silencing postmigratory primordial germ cell genes in both germ cell and somatic cell lineages
-
Maatouk D. M, Kellam LD, Mann MRW, Lei H, Li E, Bartolomei MS, Resnick JL. 2006. DNA methylation is a primary mechanism for silencing postmigratory primordial germ cell genes in both germ cell and somatic cell lineages. Development 133: 3411-3418.
-
(2006)
Development
, vol.133
, pp. 3411-3418
-
-
Maatouk, D.M.1
Kellam, L.D.2
Mann, M.R.W.3
Lei, H.4
Li, E.5
Bartolomei, M.S.6
Resnick, J.L.7
-
85
-
-
84863458292
-
Embryonic stem cell potency fluctuates with endogenous retrovirus activity
-
Macfarlan T. S, Gifford WD, Driscoll S, Lettieri K, Rowe HM, Bonanomi D., Firth A, Singer O, Trono D, Pfaff SL. 2012. Embryonic stem cell potency fluctuates with endogenous retrovirus activity. Nature 487: 57-63.
-
(2012)
Nature
, vol.487
, pp. 57-63
-
-
McFarlan, T.S.1
Gifford, W.D.2
Driscoll, S.3
Lettieri, K.4
Rowe, H.M.5
Bonanomi, D.6
Firth, A.7
Singer, O.8
Trono, D.9
Pfaff, S.L.10
-
86
-
-
33746972820
-
A maternal hypomethylation syndrome presenting as transient neonatal diabetes mellitus
-
Mackay D. JG, Boonen SE, Clayton-Smith J, Goodship J, Hahnemann J. MD, Kant SG, Njølstad PR, Robin NH, Robinson D. O, Siebert R, et al. 2006. A maternal hypomethylation syndrome presenting as transient neonatal diabetes mellitus. Hum Genet 120: 262-269.
-
(2006)
Hum Genet
, vol.120
, pp. 262-269
-
-
McKay, D.J.G.1
Boonen, S.E.2
Clayton-Smith, J.3
Goodship, J.4
Hahnemann, J.M.D.5
Kant, S.G.6
Njølstad, P.R.7
Robin, N.H.8
Robinson, D.O.9
Siebert, R.10
-
87
-
-
48349092985
-
Hypomethylation of multiple imprinted loci in individuals with transient neonatal diabetes is associated with mutations in ZFP57
-
Mackay D. JG, Callaway JLA, Marks SM, White HE, Acerini CL, Boonen S. E, Dayanikli P, Firth HV, Goodship JA, Haemers AP, et al. 2008. Hypomethylation of multiple imprinted loci in individuals with transient neonatal diabetes is associated with mutations in ZFP57. Nat Genet 40: 949-951.
-
(2008)
Nat Genet
, vol.40
, pp. 949-951
-
-
McKay, D.J.G.1
Callaway, J.L.A.2
Marks, S.M.3
White, H.E.4
Acerini, C.L.5
Boonen, S.E.6
Dayanikli, P.7
Firth, H.V.8
Goodship, J.A.9
Haemers, A.P.10
-
88
-
-
80053917872
-
Thymine DNA glycosylase can rapidly excise 5-formylcytosine and 5-carboxylcytosine: Potential implications for active demethylation of CpG sites
-
Maiti A., Drohat AC. 2011. Thymine DNA glycosylase can rapidly excise 5-formylcytosine and 5-carboxylcytosine: potential implications for active demethylation of CpG sites. J Biol Chem 286: 35334-35338.
-
(2011)
J Biol Chem
, vol.286
, pp. 35334-35338
-
-
Maiti, A.1
Drohat, A.C.2
-
89
-
-
0034598784
-
Demethylation of the zygotic paternal genome
-
Mayer W., Niveleau A, Walter J, Fundele R, Haaf T. 2000. Demethylation of the zygotic paternal genome. Nature 403: 501-502.
-
(2000)
Nature
, vol.403
, pp. 501-502
-
-
Mayer, W.1
Niveleau, A.2
Walter, J.3
Fundele, R.4
Haaf, T.5
-
90
-
-
0021657916
-
Meiosis and differentiation of mouse germ cells
-
McLaren A. 1984. Meiosis and differentiation of mouse germ cells. Symp Soc Exp Biol 38: 7-23.
-
(1984)
Symp Soc Exp Biol
, vol.38
, pp. 7-23
-
-
McLaren, A.1
-
91
-
-
33644875428
-
How is the mouse germ-cell lineage established?
-
McLaren A, Lawson KA. 2005. How is the mouse germ-cell lineage established? Differentiation 73: 435-437.
-
(2005)
Differentiation
, vol.73
, pp. 435-437
-
-
McLaren, A.1
Lawson, K.A.2
-
92
-
-
80755156279
-
Guiding DNA methylation
-
Meissner A. 2011. Guiding DNA methylation. Cell Stem Cell 9: 388-390.
-
(2011)
Cell Stem Cell
, vol.9
, pp. 388-390
-
-
Meissner, A.1
-
93
-
-
49649125042
-
Genome-scale DNA methylation maps of pluripotent and differentiated cells
-
Meissner A., Mikkelsen TS, Gu H, Wernig M, Hanna J, Sivachenko A., Zhang X, Bernstein BE, Nusbaum C, Jaffe DB, et al. 2008. Genome-scale DNA methylation maps of pluripotent and differentiated cells. Nature 454: 766-770.
-
(2008)
Nature
, vol.454
, pp. 766-770
-
-
Meissner, A.1
Mikkelsen, T.S.2
Gu, H.3
Wernig, M.4
Hanna, J.5
Sivachenko, A.6
Zhang, X.7
Bernstein, B.E.8
Nusbaum, C.9
Jaffe, D.B.10
-
94
-
-
0031889033
-
Sex-specific exons control DNA methyltransferase in mammalian germ cells
-
Mertineit C., Yoder JA, Taketo T, Laird DW, Trasler JM, Bestor TH. 1998. Sex-specific exons control DNA methyltransferase in mammalian germ cells. Development 125: 889-897.
-
(1998)
Development
, vol.125
, pp. 889-897
-
-
Mertineit, C.1
Yoder, J.A.2
Taketo, T.3
Laird, D.W.4
Trasler, J.M.5
Bestor, T.H.6
-
95
-
-
84866140627
-
Should I stay or should I go: Protection and maintenance of DNA methylation at imprinted genes
-
Messerschmidt D.M. 2012. Should I stay or should I go: protection and maintenance of DNA methylation at imprinted genes. Epigenetics 7: 969-975.
-
(2012)
Epigenetics
, vol.7
, pp. 969-975
-
-
Messerschmidt, D.M.1
-
96
-
-
84858770341
-
Trim28 is required for epigenetic stability during mouse oocyte to embryo transition
-
Messerschmidt D. M, de Vries W, Ito M, Solter D, Ferguson-Smith A., Knowles BB. 2012. Trim28 is required for epigenetic stability during mouse oocyte to embryo transition. Science 335: 1499-1502.
-
(2012)
Science
, vol.335
, pp. 1499-1502
-
-
Messerschmidt, D.M.1
de Vries, W.2
Ito, M.3
Solter, D.4
Ferguson-Smith, A.5
Knowles, B.B.6
-
97
-
-
23344440307
-
Mice deficient in APOBEC2 and APOBEC3
-
Mikl M. C, Watt IN, Lu M, Reik W, Davies SL, Neuberger MS, Rada C. 2005. Mice deficient in APOBEC2 and APOBEC3. Mol Cell Biol 25: 7270-7277.
-
(2005)
Mol Cell Biol
, vol.25
, pp. 7270-7277
-
-
Mikl, M.C.1
Watt, I.N.2
Lu, M.3
Reik, W.4
Davies, S.L.5
Neuberger, M.S.6
Rada, C.7
-
98
-
-
0025958320
-
Genomic imprinting in mammalian development: A parental tug-of-war
-
Moore T., Haig D. 1991. Genomic imprinting in mammalian development: a parental tug-of-war. Trends Genet 7: 45-49.
-
(1991)
Trends Genet
, vol.7
, pp. 45-49
-
-
Moore, T.1
Haig, D.2
-
99
-
-
79960064353
-
Tet2 loss leads to increased hematopoietic stem cell self-renewal and myeloid transformation
-
Moran-Crusio K, Reavie L, Shih A, Abdel-Wahab O, Ndiaye-Lobry D., Lobry C, Figueroa ME, Vasanthakumar A, Patel J, Zhao X., et al. 2011. Tet2 loss leads to increased hematopoietic stem cell self-renewal and myeloid transformation. Cancer Cell 20: 11-24.
-
(2011)
Cancer Cell
, vol.20
, pp. 11-24
-
-
Moran-Crusio, K.1
Reavie, L.2
Shih, A.3
Abdel-Wahab, O.4
Ndiaye-Lobry, D.5
Lobry, C.6
Figueroa, M.E.7
Vasanthakumar, A.8
Patel, J.9
Zhao, X.10
-
100
-
-
10644282845
-
Activation-induced cytidine deaminase deaminates 5-methylcytosine in DNA and is expressed in pluripotent tissues: Implications for epigenetic reprogramming
-
Morgan H. D, Dean W, Coker HA, Reik W, Petersen-Mahrt SK. 2004. Activation-induced cytidine deaminase deaminates 5-methylcytosine in DNA and is expressed in pluripotent tissues: implications for epigenetic reprogramming. J Biol Chem 279: 52353-52360.
-
(2004)
J Biol Chem
, vol.279
, pp. 52353-52360
-
-
Morgan, H.D.1
Dean, W.2
Coker, H.A.3
Reik, W.4
Petersen-Mahrt, S.K.5
-
101
-
-
1542563409
-
Initial sequencing and comparative analysis of the mouse genome
-
Mouse Genome Sequencing Consortium
-
Mouse Genome Sequencing Consortium 2002. Initial sequencing and comparative analysis of the mouse genome. Nature 420: 520-562.
-
(2002)
Nature
, vol.420
, pp. 520-562
-
-
-
102
-
-
0034268780
-
Class switch recombination and hypermutation require activation-induced cytidine deaminase (AID), a potential RNA editing enzyme
-
Muramatsu M., Kinoshita K, Fagarasan S, Yamada S, Shinkai Y, Honjo T. 2000. Class switch recombination and hypermutation require activation-induced cytidine deaminase (AID), a potential RNA editing enzyme. Cell 102: 553-563.
-
(2000)
Cell
, vol.102
, pp. 553-563
-
-
Muramatsu, M.1
Kinoshita, K.2
Fagarasan, S.3
Yamada, S.4
Shinkai, Y.5
Honjo, T.6
-
103
-
-
33845885282
-
PGC7/Stella protects against DNA demethylation in early embryogenesis
-
Nakamura T., Arai Y, Umehara H, Masuhara M, Kimura T, Taniguchi H., Sekimoto T, Ikawa M, Yoneda Y, Okabe M, et al. 2006. PGC7/Stella protects against DNA demethylation in early embryogenesis. Nat Cell Biol 9: 64-71.
-
(2006)
Nat Cell Biol
, vol.9
, pp. 64-71
-
-
Nakamura, T.1
Arai, Y.2
Umehara, H.3
Masuhara, M.4
Kimura, T.5
Taniguchi, H.6
Sekimoto, T.7
Ikawa, M.8
Yoneda, Y.9
Okabe, M.10
-
104
-
-
84862551364
-
PGC7 binds histone H3K9me2 to protect against conversion of 5mC to 5hmC in early embryos
-
Nakamura T., Liu Y-J, Nakashima H, Umehara H, Inoue K, Matoba S., Tachibana M, Ogura A, Shinkai Y, Nakano T. 2012. PGC7 binds histone H3K9me2 to protect against conversion of 5mC to 5hmC in early embryos. Nature 486: 415-419.
-
(2012)
Nature
, vol.486
, pp. 415-419
-
-
Nakamura, T.1
Liu, Y.-J.2
Nakashima, H.3
Umehara, H.4
Inoue, K.5
Matoba, S.6
Tachibana, M.7
Ogura, A.8
Shinkai, Y.9
Nakano, T.10
-
105
-
-
33846415063
-
Somatic hypermutation: Activation-induced deaminase for C/G followed by polymerase eta for A/T
-
Neuberger M. S, Rada C. 2007. Somatic hypermutation: activation-induced deaminase for C/G followed by polymerase eta for A/T. J Exp Med 204: 7-10.
-
(2007)
J Exp Med
, vol.204
, pp. 7-10
-
-
Neuberger, M.S.1
Rada, C.2
-
106
-
-
22444448587
-
Blimp1 is a critical determinant of the germ cell lineage in mice
-
Ohinata Y., Payer B, O'Carroll D, Ancelin K, Ono Y, Sano M, Barton S. C, Obukhanych T, Nussenzweig M, Tarakhovsky A, et al. 2005. Blimp1 is a critical determinant of the germ cell lineage in mice. Nature 436: 207-213.
-
(2005)
Nature
, vol.436
, pp. 207-213
-
-
Ohinata, Y.1
Payer, B.2
O'Carroll, D.3
Ancelin, K.4
Ono, Y.5
Sano, M.6
Barton, S.C.7
Obukhanych, T.8
Nussenzweig, M.9
Tarakhovsky, A.10
-
107
-
-
0031860739
-
Cloning and characterization of a family of novel mammalian DNA (cytosine-5) methyltransferases
-
Okano M., Xie S, Li E. 1998a. Cloning and characterization of a family of novel mammalian DNA (cytosine-5) methyltransferases. Nat Genet 19: 219-220.
-
(1998)
Nat Genet
, vol.19
, pp. 219-220
-
-
Okano, M.1
Xie, S.2
Li, E.3
-
108
-
-
0032102949
-
Dnmt2 is not required for de novo and maintenance methylation of viral DNA in embryonic stem cells
-
Okano M., Xie S, Li E. 1998b. Dnmt2 is not required for de novo and maintenance methylation of viral DNA in embryonic stem cells. Nucleic Acids Res 26: 2536-2540.
-
(1998)
Nucleic Acids Res
, vol.26
, pp. 2536-2540
-
-
Okano, M.1
Xie, S.2
Li, E.3
-
109
-
-
0033615717
-
DNA methyltransferases Dnmt3a and Dnmt3b are essential for de novo methylation and mammalian development
-
Okano M., Bell DW, Haber DA, Li E. 1999. DNA methyltransferases Dnmt3a and Dnmt3b are essential for de novo methylation and mammalian development. Cell 99: 247-257.
-
(1999)
Cell
, vol.99
, pp. 247-257
-
-
Okano, M.1
Bell, D.W.2
Haber, D.A.3
Li, E.4
-
110
-
-
0034176639
-
Active demethylation of the paternal genome in the mouse zygote
-
Oswald J., Engemann S, Lane N, Mayer W, Olek A, Fundele R, Dean W., Reik W, Walter J. 2000. Active demethylation of the paternal genome in the mouse zygote. Curr Biol 10: 475-478.
-
(2000)
Curr Biol
, vol.10
, pp. 475-478
-
-
Oswald, J.1
Engemann, S.2
Lane, N.3
Mayer, W.4
Olek, A.5
Fundele, R.6
Dean, W.7
Reik, W.8
Walter, J.9
-
111
-
-
34548818792
-
Dynamic DNA methylation reprogramming: Active demethylation and immediate remethylation in the male pronucleus of bovine zygotes
-
Park J. S, Jeong YS, Shin ST, Lee K-K, Kang Y-K. 2007. Dynamic DNA methylation reprogramming: active demethylation and immediate remethylation in the male pronucleus of bovine zygotes. Dev Dyn 236: 2523-2533.
-
(2007)
Dev Dyn
, vol.236
, pp. 2523-2533
-
-
Park, J.S.1
Jeong, Y.S.2
Shin, S.T.3
Lee, K.-K.4
Kang, Y.-K.5
-
112
-
-
10744225568
-
Stella is a maternal effect gene required for normal early development in mice
-
Payer B., Saitou M, Barton SC, Thresher R, Dixon JPC, Zahn D, Colledge W. H, Carlton MBL, Nakano T, Surani MA. 2003. Stella is a maternal effect gene required for normal early development in mice. Curr Biol 13: 2110-2117.
-
(2003)
Curr Biol
, vol.13
, pp. 2110-2117
-
-
Payer, B.1
Saitou, M.2
Barton, S.C.3
Thresher, R.4
Dixon, J.P.C.5
Zahn, D.6
Colledge, W.H.7
Carlton, M.B.L.8
Nakano, T.9
Surani, M.A.10
-
113
-
-
5044251591
-
Retrotransposons regulate host genes in mouse oocytes and preimplantation embryos
-
Peaston A. E, Evsikov AV, Graber JH, de Vries WN, Holbrook AE, Solter D., Knowles BB. 2004. Retrotransposons regulate host genes in mouse oocytes and preimplantation embryos. Dev Cell 7: 597-606.
-
(2004)
Dev Cell
, vol.7
, pp. 597-606
-
-
Peaston, A.E.1
Evsikov, A.V.2
Graber, J.H.3
de Vries, W.N.4
Holbrook, A.E.5
Solter, D.6
Knowles, B.B.7
-
114
-
-
42349090375
-
Hypomethylation of paternal DNA in the late mouse zygote is not essential for development
-
Polanski Z., Motosugi N, Tsurumi C, Hiiragi T, Hoffmann S. 2008. Hypomethylation of paternal DNA in the late mouse zygote is not essential for development. Int J Dev Biol 52: 295-298.
-
(2008)
Int J Dev Biol
, vol.52
, pp. 295-298
-
-
Polanski, Z.1
Motosugi, N.2
Tsurumi, C.3
Hiiragi, T.4
Hoffmann, S.5
-
115
-
-
77249148019
-
Genome-wide erasure of DNA methylation in mouse primordial germ cells is affected by AID deficiency
-
Popp C., Dean W, Feng S, Cokus SJ, Andrews S, Pellegrini M, Jacobsen S. E, Reik W. 2010. Genome-wide erasure of DNA methylation in mouse primordial germ cells is affected by AID deficiency. Nature 463: 1101-1105.
-
(2010)
Nature
, vol.463
, pp. 1101-1105
-
-
Popp, C.1
Dean, W.2
Feng, S.3
Cokus, S.J.4
Andrews, S.5
Pellegrini, M.6
Jacobsen, S.E.7
Reik, W.8
-
116
-
-
0032722062
-
Recombinant human DNA (cytosine-5) methyltransferase. I. Expression, purification, and comparison of de novo and maintenance methylation
-
Pradhan S., Bacolla A, Wells RD, Roberts RJ. 1999. Recombinant human DNA (cytosine-5) methyltransferase. I. Expression, purification, and comparison of de novo and maintenance methylation. J Biol Chem 274: 33002-33010.
-
(1999)
J Biol Chem
, vol.274
, pp. 33002-33010
-
-
Pradhan, S.1
Bacolla, A.2
Wells, R.D.3
Roberts, R.J.4
-
117
-
-
80555156105
-
In embryonic stem cells, ZFP57/KAP1 recognize a methylated hexanucleotide to affect chromatin and DNA methylation of imprinting control regions
-
Quenneville S., Verde G, Corsinotti A, Kapopoulou A, Jakobsson J, Offner S, Baglivo I, Pedone PV, Grimaldi G, Riccio A, et al. 2011. In embryonic stem cells, ZFP57/KAP1 recognize a methylated hexanucleotide to affect chromatin and DNA methylation of imprinting control regions. Mol Cell 44: 361-372.
-
(2011)
Mol Cell
, vol.44
, pp. 361-372
-
-
Quenneville, S.1
Verde, G.2
Corsinotti, A.3
Kapopoulou, A.4
Jakobsson, J.5
Offner, S.6
Baglivo, I.7
Pedone, P.V.8
Grimaldi, G.9
Riccio, A.10
-
118
-
-
79960062301
-
TET2 inactivation results in pleiotropic hematopoietic abnormalities in mouse and is a recurrent event during human lymphomagenesis
-
Quivoron C., Couronné L, Valle Della V, Lopez CK, Plo I, Wagner-Ballon O, Do Cruzeiro M, Delhommeau F, Arnulf B, Stern M-H, et al. 2011. TET2 inactivation results in pleiotropic hematopoietic abnormalities in mouse and is a recurrent event during human lymphomagenesis. Cancer Cell 20: 25-38.
-
(2011)
Cancer Cell
, vol.20
, pp. 25-38
-
-
Quivoron, C.1
Couronné, L.2
Valle Della, V.3
Lopez, C.K.4
Plo, I.5
Wagner-Ballon, O.6
Do Cruzeiro, M.7
Delhommeau, F.8
Arnulf, B.9
Stern, M.-H.10
-
119
-
-
0034625064
-
Non-CpG methylation is prevalent in embryonic stem cells and may be mediated by DNA methyltransferase 3a
-
Ramsahoye B. H, Biniszkiewicz D, Lyko F, Clark V, Bird AP, Jaenisch R. 2000. Non-CpG methylation is prevalent in embryonic stem cells and may be mediated by DNA methyltransferase 3a. Proc Natl Acad Sci 97: 5237-5242.
-
(2000)
Proc Natl Acad Sci
, vol.97
, pp. 5237-5242
-
-
Ramsahoye, B.H.1
Biniszkiewicz, D.2
Lyko, F.3
Clark, V.4
Bird, A.P.5
Jaenisch, R.6
-
120
-
-
0037093255
-
Dynamics of Dnmt1 methyltransferase expression and intracellular localization during oogenesis and preimplantation development
-
Ratnam S., Mertineit C, Ding F, Howell CY, Clarke HJ, Bestor TH, Chaillet JR, Trasler JM. 2002. Dynamics of Dnmt1 methyltransferase expression and intracellular localization during oogenesis and preimplantation development. Dev Biol 245: 304-314.
-
(2002)
Dev Biol
, vol.245
, pp. 304-314
-
-
Ratnam, S.1
Mertineit, C.2
Ding, F.3
Howell, C.Y.4
Clarke, H.J.5
Bestor, T.H.6
Chaillet, J.R.7
Trasler, J.M.8
-
121
-
-
0016692220
-
X inactivation, differentiation, and DNA methylation
-
Riggs A.D. 1975. X inactivation, differentiation, and DNA methylation. Cytogenet Cell Genet 14: 9-25.
-
(1975)
Cytogenet Cell Genet
, vol.14
, pp. 9-25
-
-
Riggs, A.D.1
-
122
-
-
0026688009
-
The mouse DNA methyltransferase 59-region. A unique housekeeping gene promoter
-
Rouleau J., Tanigawa G, Szyf M. 1992. The mouse DNA methyltransferase 59-region. A unique housekeeping gene promoter. J Biol Chem 267: 7368-7377.
-
(1992)
J Biol Chem
, vol.267
, pp. 7368-7377
-
-
Rouleau, J.1
Tanigawa, G.2
Szyf, M.3
-
123
-
-
0023236289
-
Kinetic mechanisms and interaction of rat liver DNA methyltransferase with defined DNA substrates
-
Ruchirawat M., Noshari J, Lapeyre JN. 1987. Kinetic mechanisms and interaction of rat liver DNA methyltransferase with defined DNA substrates. Mol Cell Biochem 76: 45-54.
-
(1987)
Mol Cell Biochem
, vol.76
, pp. 45-54
-
-
Ruchirawat, M.1
Noshari, J.2
Lapeyre, J.N.3
-
125
-
-
79955096234
-
Maternal diet and aging alter the epigenetic control of a promoter-enhancer interaction at the Hnf4a gene in rat pancreatic islets
-
Sandovici I., Smith NH, Nitert MD, Ackers-Johnson M, Uribe-Lewis S., Ito Y, Jones RH, Marquez VE, Cairns W, Tadayyon M, et al. 2011. Maternal diet and aging alter the epigenetic control of a promoter-enhancer interaction at the Hnf4a gene in rat pancreatic islets. Proc Natl Acad Sci 108: 5449-5454.
-
(2011)
Proc Natl Acad Sci
, vol.108
, pp. 5449-5454
-
-
Sandovici, I.1
Smith, N.H.2
Nitert, M.D.3
Ackers-Johnson, M.4
Uribe-Lewis, S.5
Ito, Y.6
Jones, R.H.7
Marquez, V.E.8
Cairns, W.9
Tadayyon, M.10
-
126
-
-
3042854695
-
Epigenetic reprogramming during early development in mammals
-
Santos F., Dean W. 2004. Epigenetic reprogramming during early development in mammals. Reproduction 127: 643-651.
-
(2004)
Reproduction
, vol.127
, pp. 643-651
-
-
Santos, F.1
Dean, W.2
-
127
-
-
0036145567
-
Dynamic reprogramming of DNA methylation in the early mouse embryo
-
Santos F., Hendrich B, Reik W, Dean W. 2002. Dynamic reprogramming of DNA methylation in the early mouse embryo. Dev Biol 241: 172-182.
-
(2002)
Dev Biol
, vol.241
, pp. 172-182
-
-
Santos, F.1
Hendrich, B.2
Reik, W.3
Dean, W.4
-
128
-
-
14844286976
-
Dynamic chromatin modifications characterise the first cell cycle in mouse embryos
-
Santos F., Peters AH, Otte AP, Reik W, Dean W. 2005. Dynamic chromatin modifications characterise the first cell cycle in mouse embryos. Dev Biol 280: 225-236.
-
(2005)
Dev Biol
, vol.280
, pp. 225-236
-
-
Santos, F.1
Peters, A.H.2
Otte, A.P.3
Reik, W.4
Dean, W.5
-
129
-
-
38349100549
-
Epigenetic events in mammalian germ-cell development: Reprogramming and beyond
-
Sasaki H., Matsui Y. 2008. Epigenetic events in mammalian germ-cell development: reprogramming and beyond. Nat Rev Genet 2008: 129-140.
-
(2008)
Nat Rev Genet
, vol.2008
, pp. 129-140
-
-
Sasaki, H.1
Matsui, Y.2
-
130
-
-
84862681459
-
Mechanism and stem-cell activity of 5-carboxycytosine decarboxylation determined by isotope tracing
-
Schiesser S. S, Hackner BB, Pfaffeneder TT, Müller MM, Hagemeier C. C, Truss MM, Carell TT. 2012. Mechanism and stem-cell activity of 5-carboxycytosine decarboxylation determined by isotope tracing. Angew Chem Int Ed Engl 51: 6516-6520.
-
(2012)
Angew Chem Int Ed Engl
, vol.51
, pp. 6516-6520
-
-
Schiesser, S.S.1
Hackner, B.B.2
Pfaffeneder, T.T.3
Müller, M.M.4
Hagemeier, C.C.5
Truss, M.M.6
Carell, T.T.7
-
131
-
-
0035118229
-
Targeting histone deacetylase complexes via KRAB-zinc finger proteins: The PHD and bromodomains of KAP-1 form a cooperative unit that recruits a novel isoform of the Mi-2α subunit of NuRD
-
Schultz D. C, Friedman JR, Rauscher FJ. 2001. Targeting histone deacetylase complexes via KRAB-zinc finger proteins: the PHD and bromodomains of KAP-1 form a cooperative unit that recruits a novel isoform of the Mi-2α subunit of NuRD. Genes Dev 15: 428-443.
-
(2001)
Genes Dev
, vol.15
, pp. 428-443
-
-
Schultz, D.C.1
Friedman, J.R.2
Rauscher, F.J.3
-
132
-
-
0037089626
-
SETDB1: A novel KAP-1-associated histone H3, lysine 9-specific methyltransferase that contributes to HP1-mediated silencing of euchromatic genes by KRAB zinc-finger proteins
-
Schultz D. C, Ayyanathan K, Negorev D, Maul GG, Rauscher FJ. 2002. SETDB1: a novel KAP-1-associated histone H3, lysine 9-specific methyltransferase that contributes to HP1-mediated silencing of euchromatic genes by KRAB zinc-finger proteins. Genes Dev 16: 919-932.
-
(2002)
Genes Dev
, vol.16
, pp. 919-932
-
-
Schultz, D.C.1
Ayyanathan, K.2
Negorev, D.3
Maul, G.G.4
Rauscher, F.J.5
-
133
-
-
84871702441
-
The dynamics of genome-wide DNA methylation reprogramming in mouse primordial germ cells
-
Seisenberger S., Andrews S, Krueger F, Arand J, Walter J, Santos F, Popp C., Thienpont B, Dean W, Reik W. 2012. The dynamics of genome-wide DNA methylation reprogramming in mouse primordial germ cells. Mol Cell 48: 849-862.
-
(2012)
Mol Cell
, vol.48
, pp. 849-862
-
-
Seisenberger, S.1
Andrews, S.2
Krueger, F.3
Arand, J.4
Walter, J.5
Santos, F.6
Popp, C.7
Thienpont, B.8
Dean, W.9
Reik, W.10
-
134
-
-
12944308793
-
Extensive and orderly reprogramming of genome-wide chromatin modifications associated with specification and early development of germ cells in mice
-
Seki Y., Hayashi K, Itoh K, Mizugaki M, Saitou M, Matsui Y. 2005. Extensive and orderly reprogramming of genome-wide chromatin modifications associated with specification and early development of germ cells in mice. Dev Biol 278: 440-458.
-
(2005)
Dev Biol
, vol.278
, pp. 440-458
-
-
Seki, Y.1
Hayashi, K.2
Itoh, K.3
Mizugaki, M.4
Saitou, M.5
Matsui, Y.6
-
135
-
-
34447522791
-
Cellular dynamics associated with the genome-wide epigenetic reprogramming in migrating primordial germ cells in mice
-
Seki Y., Yamaji M, Yabuta Y, Sano M, Shigeta M, Matsui Y, Saga Y, Tachibana M, Shinkai Y, Saitou M. 2007. Cellular dynamics associated with the genome-wide epigenetic reprogramming in migrating primordial germ cells in mice. Development 134: 2627-2638.
-
(2007)
Development
, vol.134
, pp. 2627-2638
-
-
Seki, Y.1
Yamaji, M.2
Yabuta, Y.3
Sano, M.4
Shigeta, M.5
Matsui, Y.6
Saga, Y.7
Tachibana, M.8
Shinkai, Y.9
Saitou, M.10
-
136
-
-
36849072573
-
The SRA protein Np95 mediates epigenetic inheritance by recruiting Dnmt1 to methylated DNA
-
Sharif J., Muto M, Takebayashi S-I, Suetake I, Iwamatsu A, Endo TA, Shinga J, Mizutani-Koseki Y, Toyoda T, Okamura K, et al. 2007. The SRA protein Np95 mediates epigenetic inheritance by recruiting Dnmt1 to methylated DNA. Nature 450: 908-912.
-
(2007)
Nature
, vol.450
, pp. 908-912
-
-
Sharif, J.1
Muto, M.2
Takebayashi, S.-I.3
Suetake, I.4
Iwamatsu, A.5
Endo, T.A.6
Shinga, J.7
Mizutani-Koseki, Y.8
Toyoda, T.9
Okamura, K.10
-
137
-
-
35948981875
-
Genome-wide profiling of DNA methylation reveals a class of normally methylated CpG island promoters
-
Shen L., Kondo Y, Guo Y, Zhang J, Zhang L, Ahmed S, Shu J, Chen X., Waterland RA, Issa J-PJ. 2007. Genome-wide profiling of DNA methylation reveals a class of normally methylated CpG island promoters. PLoS Genet 3: 2023-2036.
-
(2007)
PLoS Genet
, vol.3
, pp. 2023-2036
-
-
Shen, L.1
Kondo, Y.2
Guo, Y.3
Zhang, J.4
Zhang, L.5
Ahmed, S.6
Shu, J.7
Chen, X.8
Waterland, R.A.9
Issa, J.-P.J.10
-
138
-
-
84876946045
-
Genome-wide analysis revealsTETand TDG-dependent 5-methylcytosine oxidation dynamics
-
Shen L., Wu H, Diep D, Yamaguchi S, D'Alessio AC, Fung H-L, Zhang K., Zhang Y. 2013. Genome-wide analysis revealsTETand TDG-dependent 5-methylcytosine oxidation dynamics. Cell 153: 692-706.
-
(2013)
Cell
, vol.153
, pp. 692-706
-
-
Shen, L.1
Wu, H.2
Diep, D.3
Yamaguchi, S.4
D'Alessio, A.C.5
Fung, H.-L.6
Zhang, K.7
Zhang, Y.8
-
139
-
-
84655164284
-
De novo DNA methylation: A germ cell perspective
-
Smallwood S. A, Kelsey G. 2012. De novo DNA methylation: a germ cell perspective. Trends Genet 28: 33-42.
-
(2012)
Trends Genet
, vol.28
, pp. 33-42
-
-
Smallwood, S.A.1
Kelsey, G.2
-
140
-
-
79960926264
-
Dynamic CpG island methylation landscape in oocytes and preimplantation embryos
-
Smallwood S. A, Tomizawa S-I, Krueger F, Ruf N, Carli N, Segonds-Pichon A, Sato S, Hata K, Andrews SR, Kelsey G. 2011. Dynamic CpG island methylation landscape in oocytes and preimplantation embryos. Nat Genet43: 811-814.
-
(2011)
Nat Genet
, vol.43
, pp. 811-814
-
-
Smallwood, S.A.1
Tomizawa, S.-I.2
Krueger, F.3
Ruf, N.4
Carli, N.5
Segonds-Pichon, A.6
Sato, S.7
Hata, K.8
Andrews, S.R.9
Kelsey, G.10
-
141
-
-
84874194072
-
DNA methylation: Roles in mammalian development
-
Smith Z. D, Meissner A. 2013. DNA methylation: roles in mammalian development. Nat Rev Genet 14: 204-220.
-
(2013)
Nat Rev Genet
, vol.14
, pp. 204-220
-
-
Smith, Z.D.1
Meissner, A.2
-
142
-
-
84859910536
-
A unique regulatory phase of DNAmethylation in the early mammalianembryo
-
Smith Z. D, Chan MM, Mikkelsen TS, Gu H, Gnirke A, Regev A, Meissner A. 2012. A unique regulatory phase of DNAmethylation in the early mammalianembryo. Nature 484: 339-344.
-
(2012)
Nature
, vol.484
, pp. 339-344
-
-
Smith, Z.D.1
Chan, M.M.2
Mikkelsen, T.S.3
Gu, H.4
Gnirke, A.5
Regev, A.6
Meissner, A.7
-
143
-
-
84355163093
-
DNA-binding factors shape the mouse methylome at distal regulatory regions
-
Stadler M. B, Murr R, Burger L, Ivanek R, Lienert F, Schöler A, van Nimwegen E, Wirbelauer C, Oakeley EJ, Gaidatzis D, et al. 2011. DNA-binding factors shape the mouse methylome at distal regulatory regions. Nature 480: 490-495.
-
(2011)
Nature
, vol.480
, pp. 490-495
-
-
Stadler, M.B.1
Murr, R.2
Burger, L.3
Ivanek, R.4
Lienert, F.5
Schöler, A.6
van Nimwegen, E.7
Wirbelauer, C.8
Oakeley, E.J.9
Gaidatzis, D.10
-
144
-
-
66149147557
-
Developmental programming of CpG island methylation profiles in the human genome
-
Straussman R., Nejman D, Roberts D, Steinfeld I, Blum B, Benvenisty N., Simon I, Yakhini Z, Cedar H. 2009. Developmental programming of CpG island methylation profiles in the human genome. Nat Struct Mol Biol 16: 564-571.
-
(2009)
Nat Struct Mol Biol
, vol.16
, pp. 564-571
-
-
Straussman, R.1
Nejman, D.2
Roberts, D.3
Steinfeld, I.4
Blum, B.5
Benvenisty, N.6
Simon, I.7
Yakhini, Z.8
Cedar, H.9
-
145
-
-
84864298057
-
Proteins involved in establishment and maintenance of imprinted methylation marks
-
Strogantsev R., Ferguson-Smith AC. 2012. Proteins involved in establishment and maintenance of imprinted methylation marks. Brief Funct Genomics 11: 227-239.
-
(2012)
Brief Funct Genomics
, vol.11
, pp. 227-239
-
-
Strogantsev, R.1
Ferguson-Smith, A.C.2
-
146
-
-
34247489172
-
Germ versus soma decisions: Lessons from flies and worms
-
Strome S., Lehmann R. 2007. Germ versus soma decisions: lessons from flies and worms. Science 316: 392-393.
-
(2007)
Science
, vol.316
, pp. 392-393
-
-
Strome, S.1
Lehmann, R.2
-
147
-
-
66149146320
-
Conversion of 5-methylcytosine to 5-hydroxymethylcytosine in mammalian DNA by MLL partner TET1
-
Tahiliani M., Koh KP, Shen Y, PastorWA, Bandukwala H, Brudno Y, Agarwal S, Iyer LM, Liu DR, Aravind L, et al. 2009. Conversion of 5-methylcytosine to 5-hydroxymethylcytosine in mammalian DNA by MLL partner TET1. Science 324: 930-935.
-
(2009)
Science
, vol.324
, pp. 930-935
-
-
Tahiliani, M.1
Koh, K.P.2
Shen, Y.3
Pastor, W.A.4
Bandukwala, H.5
Brudno, Y.6
Agarwal, S.7
Iyer, L.M.8
Liu, D.R.9
Aravind, L.10
-
148
-
-
0019393572
-
Proliferation and migration of primordial germ cells during compensatory growth in mouse embryos
-
Tam P. P, Snow MH. 1981. Proliferation and migration of primordial germ cells during compensatory growth in mouse embryos. J Embryol Exp Morphol 64: 133-147.
-
(1981)
J Embryol Exp Morphol
, vol.64
, pp. 133-147
-
-
Tam, P.P.1
Snow, M.H.2
-
149
-
-
77951116072
-
CpG islands influence chromatin structure via the CpGbinding protein Cfp1
-
Thomson J. P, Skene PJ, Selfridge J, Clouaire T, Guy J, Webb S, Kerr A. RW, Deaton A, Andrews R, James KD, et al. 2010. CpG islands influence chromatin structure via the CpGbinding protein Cfp1. Nature 464: 1082-1086.
-
(2010)
Nature
, vol.464
, pp. 1082-1086
-
-
Thomson, J.P.1
Skene, P.J.2
Selfridge, J.3
Clouaire, T.4
Guy, J.5
Webb, S.6
Kerr, A.R.W.7
Deaton, A.8
Andrews, R.9
James, K.D.10
-
150
-
-
79951529848
-
Dynamic stage-specific changes in imprinted differentially methylated regions during early mammalian development and prevalence of non-CpG methylation in oocytes
-
Tomizawa S-I, Kobayashi H, Watanabe T, Andrews S, Hata K, Kelsey G., Sasaki H. 2011. Dynamic stage-specific changes in imprinted differentially methylated regions during early mammalian development and prevalence of non-CpG methylation in oocytes. Development 138: 811-820.
-
(2011)
Development
, vol.138
, pp. 811-820
-
-
Tomizawa, S.-I.1
Kobayashi, H.2
Watanabe, T.3
Andrews, S.4
Hata, K.5
Kelsey, G.6
Sasaki, H.7
-
151
-
-
33847055935
-
Endogenous cytosine damage products alter the site selectivity of human DNA maintenance methyltransferase DNMT1
-
Valinluck V., Sowers LC. 2007. Endogenous cytosine damage products alter the site selectivity of human DNA maintenance methyltransferase DNMT1. Cancer Res 67: 946-950.
-
(2007)
Cancer Res
, vol.67
, pp. 946-950
-
-
Valinluck, V.1
Sowers, L.C.2
-
152
-
-
84875949201
-
Stage-specific roles for tet1 and tet2 in DNA demethylation in primordial germ cells
-
Vincent J. J, Huang Y, Chen P-Y, Feng S, Calvopiña JH, Nee K, Lee SA, Le T, Yoon AJ, Faull K, et al. 2013. Stage-specific roles for tet1 and tet2 in DNA demethylation in primordial germ cells. Cell Stem Cell 12: 470-478.
-
(2013)
Cell Stem Cell
, vol.12
, pp. 470-478
-
-
Vincent, J.J.1
Huang, Y.2
Chen, P.-Y.3
Feng, S.4
Calvopiña, J.H.5
Nee, K.6
Lee, S.A.7
Le, T.8
Yoon, A.J.9
Faull, K.10
-
153
-
-
0031662164
-
Transcription of IAP endogenous retroviruses is constrained by cytosine methylation
-
Walsh C. P, Chaillet JR, Bestor TH. 1998. Transcription of IAP endogenous retroviruses is constrained by cytosine methylation. Nat Genet 20: 116-117.
-
(1998)
Nat Genet
, vol.20
, pp. 116-117
-
-
Walsh, C.P.1
Chaillet, J.R.2
Bestor, T.H.3
-
154
-
-
0036803302
-
Stage-and cellspecific expression of Dnmt3a and Dnmt3b during embryogenesis
-
Watanabe D., Suetake I, Tada T, Tajima S. 2002. Stage-and cellspecific expression of Dnmt3a and Dnmt3b during embryogenesis. Mech Dev 118: 187-190.
-
(2002)
Mech Dev
, vol.118
, pp. 187-190
-
-
Watanabe, D.1
Suetake, I.2
Tada, T.3
Tajima, S.4
-
155
-
-
34047116826
-
Distribution, silencing potential and evolutionary impact of promoter DNA methylation in the human genome
-
Weber M., Hellmann I, Stadler MB, Ramos L, Pääbo S, Rebhan M, Schübeler D. 2007. Distribution, silencing potential and evolutionary impact of promoter DNA methylation in the human genome. Nat Genet 39: 457-466.
-
(2007)
Nat Genet
, vol.39
, pp. 457-466
-
-
Weber, M.1
Hellmann, I.2
Stadler, M.B.3
Ramos, L.4
Pääbo, S.5
Rebhan, M.6
Schübeler, D.7
-
156
-
-
77953596050
-
Dynamic link of DNA demethylation, DNA strand breaks and repair in mouse zygotes
-
Wossidlo M., Arand J, Sebastiano V, Lepikhov K, Boiani M, Reinhardt R., Schöler H, Walter J. 2010. Dynamic link of DNA demethylation, DNA strand breaks and repair in mouse zygotes. EMBO J 29: 1877-1888.
-
(2010)
EMBO J
, vol.29
, pp. 1877-1888
-
-
Wossidlo, M.1
Arand, J.2
Sebastiano, V.3
Lepikhov, K.4
Boiani, M.5
Reinhardt, R.6
Schöler, H.7
Walter, J.8
-
157
-
-
79952713567
-
5-Hydroxymethylcytosine in the mammalian zygote is linked with epigenetic reprogramming
-
Wossidlo M., Nakamura T, Lepikhov K, Marques CJ, Zakhartchenko V, Boiani M, Arand J, Nakano T, Reik W, Walter J. 2011. 5-Hydroxymethylcytosine in the mammalian zygote is linked with epigenetic reprogramming. Nat Comms 2: 241.
-
(2011)
Nat Comms
, vol.2
, pp. 241
-
-
Wossidlo, M.1
Nakamura, T.2
Lepikhov, K.3
Marques, C.J.4
Zakhartchenko, V.5
Boiani, M.6
Arand, J.7
Nakano, T.8
Reik, W.9
Walter, J.10
-
158
-
-
77956095231
-
Active DNA demethylation: Many roads lead to Rome
-
Wu S. C, Zhang Y. 2010. Active DNA demethylation: many roads lead to Rome. Nat Rev Mol Cell Biol 11: 607-620.
-
(2010)
Nat Rev Mol Cell Biol
, vol.11
, pp. 607-620
-
-
Wu, S.C.1
Zhang, Y.2
-
159
-
-
84892763878
-
Reversing DNA methylation: Mechanisms, genomics, and biological functions
-
Wu H., Zhang Y. 2014. Reversing DNA methylation: mechanisms, genomics, and biological functions. Cell 156: 45-68.
-
(2014)
Cell
, vol.156
, pp. 45-68
-
-
Wu, H.1
Zhang, Y.2
-
160
-
-
0033547330
-
Chromosome instability and immunodeficiency syndrome caused by mutations in a DNA methyltransferase gene
-
Xu G. L, Bestor TH, Bourc'his D, Hsieh CL, Tommerup N, Bugge M, Hulten M, Qu X, Russo JJ, Viegas-Péquignot E. 1999. Chromosome instability and immunodeficiency syndrome caused by mutations in a DNA methyltransferase gene. Nature 402: 187-191.
-
(1999)
Nature
, vol.402
, pp. 187-191
-
-
Xu, G.L.1
Bestor, T.H.2
Bourc'his, D.3
Hsieh, C.L.4
Tommerup, N.5
Bugge, M.6
Hulten, M.7
Qu, X.8
Russo, J.J.9
Viegas-Péquignot, E.10
-
161
-
-
33750874985
-
Gene expression dynamics during germline specification in mice identified by quantitative single-cell gene expression profiling
-
Yabuta Y., Kurimoto K, Ohinata Y, Seki Y, Saitou M. 2006. Gene expression dynamics during germline specification in mice identified by quantitative single-cell gene expression profiling. Biol Reprod 75: 705-716.
-
(2006)
Biol Reprod
, vol.75
, pp. 705-716
-
-
Yabuta, Y.1
Kurimoto, K.2
Ohinata, Y.3
Seki, Y.4
Saitou, M.5
-
162
-
-
84871438065
-
Tet1 controls meiosis by regulating meiotic gene expression
-
Yamaguchi S., Hong K, Liu R, Shen L, Inoue A, Diep D, Zhang K, Zhang Y. 2012. Tet1 controls meiosis by regulating meiotic gene expression. Nature 492: 443-447.
-
(2012)
Nature
, vol.492
, pp. 443-447
-
-
Yamaguchi, S.1
Hong, K.2
Liu, R.3
Shen, L.4
Inoue, A.5
Diep, D.6
Zhang, K.7
Zhang, Y.8
-
163
-
-
84874655393
-
Dynamics of 5-methylcytosine and 5-hydroxymethylcytosine during germ cell reprogramming
-
Yamaguchi S., Hong K, Liu R, Inoue A, Shen L, Zhang K, Zhang Y. 2013. Dynamics of 5-methylcytosine and 5-hydroxymethylcytosine during germ cell reprogramming. Cell Res 23: 329-339.
-
(2013)
Cell Res
, vol.23
, pp. 329-339
-
-
Yamaguchi, S.1
Hong, K.2
Liu, R.3
Inoue, A.4
Shen, L.5
Zhang, K.6
Zhang, Y.7
-
164
-
-
84890568163
-
Role of Tet1 in erasure of genomic imprinting
-
Yamaguchi S., Shen L, Liu Y, Sendler D, Zhang Y. 2014. Role of Tet1 in erasure of genomic imprinting. Nature 504: 460-464.
-
(2014)
Nature
, vol.504
, pp. 460-464
-
-
Yamaguchi, S.1
Shen, L.2
Liu, Y.3
Sendler, D.4
Zhang, Y.5
-
165
-
-
0031577334
-
DNA (cytosine-5)-methyltransferases in mouse cells and tissues. Studies with a mechanism-based probe
-
Yoder J. A, Soman NS, Verdine GL, Bestor TH. 1997. DNA (cytosine-5)-methyltransferases in mouse cells and tissues. Studies with a mechanism-based probe. J Mol Biol 270: 385-395.
-
(1997)
J Mol Biol
, vol.270
, pp. 385-395
-
-
Yoder, J.A.1
Soman, N.S.2
Verdine, G.L.3
Bestor, T.H.4
-
166
-
-
84855281409
-
Genomic distribution and inter-sample variation of non-CpG methylation across human cell types
-
Ziller M. J, Müller F, Liao J, Zhang Y, Gu H, Bock C, Boyle P, Epstein C. B, Bernstein BE, Lengauer T, et al. 2011. Genomic distribution and inter-sample variation of non-CpG methylation across human cell types. PLoS Genet 7: e1002389.
-
(2011)
PLoS Genet
, vol.7
-
-
Ziller, M.J.1
Müller, F.2
Liao, J.3
Zhang, Y.4
Gu, H.5
Bock, C.6
Boyle, P.7
Epstein, C.B.8
Bernstein, B.E.9
Lengauer, T.10
-
167
-
-
84862908822
-
Zinc finger protein ZFP57 requires its co-factor to recruit DNA methyltransferases and maintains DNA methylation imprint in embryonic stem cells via its transcriptional repression domain
-
Zuo X., Sheng J, Lau H-T, McDonald CM, Andrade M, Cullen DE, Bell FT, Iacovino M, Kyba M, Xu G, et al. 2012. Zinc finger protein ZFP57 requires its co-factor to recruit DNA methyltransferases and maintains DNA methylation imprint in embryonic stem cells via its transcriptional repression domain. J Biol Chem 287: 2107-2118.
-
(2012)
J Biol Chem
, vol.287
, pp. 2107-2118
-
-
Zuo, X.1
Sheng, J.2
Lau, H.-T.3
McDonald, C.M.4
Andrade, M.5
Cullen, D.E.6
Bell, F.T.7
Iacovino, M.8
Kyba, M.9
Xu, G.10
|