-
1
-
-
10244239321
-
Life with 6000 genes
-
546
-
Goffeau A, Barrell BG, Bussey H, et al. Life with 6000 genes. Science 1996; 274(5287): 546,563-567.
-
(1996)
Science
, vol.274
, Issue.5287
, pp. 563-567
-
-
Goffeau, A.1
Barrell, B.G.2
Bussey, H.3
-
2
-
-
15444350252
-
The complete genome sequence of Escherichia coli K-12
-
Blattner FR, Plunkett G, Bloch CA, et al. The complete genome sequence of Escherichia coli K-12. Science 1997; 277(5331): 1453-1462.
-
(1997)
Science
, vol.277
, Issue.5331
, pp. 1453-1462
-
-
Blattner, F.R.1
Plunkett, G.2
Bloch, C.A.3
-
3
-
-
84864839474
-
Systems biology of yeast: Enabling technology for development of cell factories for production of advanced biofuels
-
de Jong B, Siewers V, Nielsen J. Systems biology of yeast: Enabling technology for development of cell factories for production of advanced biofuels. Curr Opin Biotechnol 2012; 23(4): 624-630.
-
(2012)
Curr Opin Biotechnol
, vol.23
, Issue.4
, pp. 624-630
-
-
De Jong, B.1
Siewers, V.2
Nielsen, J.3
-
4
-
-
0037464589
-
The genome sequence of the filamentous fungus Neurospora crassa
-
Galagan JE, Calvo SE, Borkovich KA, et al. The genome sequence of the filamentous fungus Neurospora crassa. Nature 2003; 422(6934): 859-868.
-
(2003)
Nature
, vol.422
, Issue.6934
, pp. 859-868
-
-
Galagan, J.E.1
Calvo, S.E.2
Borkovich, K.A.3
-
5
-
-
29244442741
-
Genome sequencing and analysis of Aspergillus oryzae
-
Machida M, Asai K, Sano M, et al. Genome sequencing and analysis of Aspergillus oryzae. Nature 2005; 438(7071): 1157-1161.
-
(2005)
Nature
, vol.438
, Issue.7071
, pp. 1157-1161
-
-
Machida, M.1
Asai, K.2
Sano, M.3
-
6
-
-
33846861493
-
Genome sequencing and analysis of the versatile cell factory Aspergillus niger CBS 513.88
-
Pel HJ, de Winde JH, Archer DB, et al. Genome sequencing and analysis of the versatile cell factory Aspergillus niger CBS 513.88. Nat Biotechnol 2007; 25(2): 221-231.
-
(2007)
Nat Biotechnol
, vol.25
, Issue.2
, pp. 221-231
-
-
Pel, H.J.1
De Winde, J.H.2
Archer, D.B.3
-
7
-
-
43449098828
-
Genome sequencing and analysis of the biomass-degrading fungus Trichoderma reesei (syn. Hypocrea jecorina)
-
Martinez D, Berka RM, Henrissat B, et al. Genome sequencing and analysis of the biomass-degrading fungus Trichoderma reesei (syn. Hypocrea jecorina). Nat Biotechnol 2008; 26(5): 553-560.
-
(2008)
Nat Biotechnol
, vol.26
, Issue.5
, pp. 553-560
-
-
Martinez, D.1
Berka, R.M.2
Henrissat, B.3
-
8
-
-
53649092922
-
Genome sequencing and analysis of the filamentous fungus penicillium chrysogenum
-
van den Berg MA, Albang R, Albermann K, et al. Genome sequencing and analysis of the filamentous fungus Penicillium chrysogenum. Nat Biotechnol 2008; 26(10): 1161-1168.
-
(2008)
Nat Biotechnol
, vol.26
, Issue.10
, pp. 1161-1168
-
-
Van Den Berg, M.A.1
Albang, R.2
Albermann, K.3
-
9
-
-
84871203655
-
Identification of a transcription factor controlling pH-dependent organic acid response in aspergillus niger
-
Poulsen L, Andersen MR, Lantz AE, et al. Identification of a transcription factor controlling pH-dependent organic acid response in Aspergillus niger. PLoS One 2012; 7(12): e50596.
-
(2012)
PLoS One
, vol.7
, Issue.12
-
-
Poulsen, L.1
Andersen, M.R.2
Lantz, A.E.3
-
10
-
-
84864537150
-
The carbon starvation response of Aspergillus niger during submerged cultivation: Insights from the transcriptome and secretome
-
Nitsche BM, Jorgensen TR, Akeroyd M, et al. The carbon starvation response of Aspergillus niger during submerged cultivation: Insights from the transcriptome and secretome. BMC Genomics 2012; 13: 380.
-
(2012)
BMC Genomics
, vol.13
, pp. 380
-
-
Nitsche, B.M.1
Jorgensen, T.R.2
Akeroyd, M.3
-
11
-
-
81455131559
-
Industrial glucoamylase fed-batch benefits from oxygen limitation and high osmolarity
-
Pedersen L, Hansen K, Nielsen J, et al. Industrial glucoamylase fed-batch benefits from oxygen limitation and high osmolarity. Biotechnol Bioeng 2012; 109(1): 116-124.
-
(2012)
Biotechnol Bioeng
, vol.109
, Issue.1
, pp. 116-124
-
-
Pedersen, L.1
Hansen, K.2
Nielsen, J.3
-
12
-
-
70349414271
-
Cellulase production by continuous culture of Trichoderma reesei Rut C30 using acid hydrolysate prepared to retain more oligosaccharides for induction
-
Lo CM, Zhang Q, Callow NV, et al. Cellulase production by continuous culture of Trichoderma reesei Rut C30 using acid hydrolysate prepared to retain more oligosaccharides for induction. Bioresour Technol 2010; 101(2): 717-723.
-
(2010)
Bioresour Technol
, vol.101
, Issue.2
, pp. 717-723
-
-
Lo, C.M.1
Zhang, Q.2
Callow, N.V.3
-
13
-
-
78651065373
-
Cytosolic NADPH balancing in Penicillium chrysogenum cultivated on mixtures of glucose and ethanol
-
Zhao Z, Kuijvenhoven K, van Gulik WM, et al. Cytosolic NADPH balancing in Penicillium chrysogenum cultivated on mixtures of glucose and ethanol. Appl Microbiol Biotechnol 2011; 89(1): 63-72.
-
(2011)
Appl Microbiol Biotechnol
, vol.89
, Issue.1
, pp. 63-72
-
-
Zhao, Z.1
Kuijvenhoven, K.2
Van Gulik, W.M.3
-
14
-
-
0034085404
-
Growth of filamentous fungi in submerged culture: Problems and possible solutions
-
Gibbs PA, Seviour RJ, Schmid F. Growth of filamentous fungi in submerged culture: Problems and possible solutions. Crit Rev Biotechnol 2000; 20(1): 17-48.
-
(2000)
Crit Rev Biotechnol
, vol.20
, Issue.1
, pp. 17-48
-
-
Gibbs, P.A.1
Seviour, R.J.2
Schmid, F.3
-
15
-
-
84890036317
-
Production of organic acids by filamentous fungi
-
Osiewacz HD, ed.. Berlin, Springer-Verlag
-
Kubicek CP, Punt P, Visser J. Production of organic acids by filamentous fungi. In: Osiewacz HD, ed. The Mycota 10. Industrial Applications. Berlin, Springer- Verlag 2010: 215-234.
-
(2010)
The Mycota 10. Industrial Applications
, pp. 215-234
-
-
Kubicek, C.P.1
Punt, P.2
Visser, J.3
-
16
-
-
82455164305
-
Impact of the Penicillium chrysogenum genome on industrial production of metabolites
-
van den Berg MA. Impact of the Penicillium chrysogenum genome on industrial production of metabolites. Appl Microbiol Biotechnol 2011; 92(1): 45-53.
-
(2011)
Appl Microbiol Biotechnol
, vol.92
, Issue.1
, pp. 45-53
-
-
Van Den Berg, M.A.1
-
18
-
-
84864942946
-
Production of recombinant proteins by filamentous fungi
-
Ward OP. Production of recombinant proteins by filamentous fungi. Biotechnol Adv 2012; 30(5): 1119-1139.
-
(2012)
Biotechnol Adv
, vol.30
, Issue.5
, pp. 1119-1139
-
-
Ward, O.P.1
-
19
-
-
33846165521
-
Changes in primary metabolism leading to citric acid overflow in Aspergillus niger
-
Legisa M, Mattey M. Changes in primary metabolism leading to citric acid overflow in Aspergillus niger. Biotechnol Lett 2007; 29(2): 181-190.
-
(2007)
Biotechnol Lett
, vol.29
, Issue.2
, pp. 181-190
-
-
Legisa, M.1
Mattey, M.2
-
20
-
-
28544445518
-
Organic acid production by filamentous fungi
-
Tkacz JS, Lange L, eds. New York, NY: Kluwer Academic/Plenum Publishers
-
Magnuson JK, Lasure L. Organic acid production by filamentous fungi. In: Tkacz JS, Lange L, eds. Advances in Fungal Biotechnology for Industry, Agriculture, and Medicine. New York, NY: Kluwer Academic/Plenum Publishers, 2004: 307- 340.
-
(2004)
Advances in Fungal Biotechnology for Industry, Agriculture, and Medicine
, pp. 307-340
-
-
Magnuson, J.K.1
Lasure, L.2
-
21
-
-
33947635689
-
Advances in citric acid fermentation by Aspergillus niger: Biochemical aspects, membrane transport and modeling
-
Papagianni M. Advances in citric acid fermentation by Aspergillus niger: Biochemical aspects, membrane transport and modeling. Biotechnol Adv 2007; 25(3): 244-263.
-
(2007)
Biotechnol Adv
, vol.25
, Issue.3
, pp. 244-263
-
-
Papagianni, M.1
-
22
-
-
0037500087
-
Metabolic engineering of beta-lactam production
-
Thykaer J, Nielsen J. Metabolic engineering of beta-lactam production. Metab Eng 2003; 5(1): 56-69.
-
(2003)
Metab Eng
, vol.5
, Issue.1
, pp. 56-69
-
-
Thykaer, J.1
Nielsen, J.2
-
23
-
-
4244052714
-
Industrial synthesis of semisynthetic antibiotics
-
Bruggink A, ed. Dordrecht, The Netherlands: Kluwer Acadenic Publishers
-
Bruggink A, Roy PD. Industrial synthesis of semisynthetic antibiotics. In: Bruggink A, ed. Synthesis of b-Lactam Antibiotics, Chemistry, Biocatalysis and Process Integration. Dordrecht, The Netherlands: Kluwer Acadenic Publishers, 2001: 13-56.
-
(2001)
Synthesis of B-Lactam Antibiotics, Chemistry, Biocatalysis and Process Integration
, pp. 13-56
-
-
Bruggink, A.1
Roy, P.D.2
-
24
-
-
0038236925
-
Industrial production of b-lactam antibiotics
-
Elander RP. Industrial production of b-lactam antibiotics. Appl Microbiol Biotechnol 2003; 61(5-6): 385-392.
-
(2003)
Appl Microbiol Biotechnol
, vol.61
, Issue.5-6
, pp. 385-392
-
-
Elander, R.P.1
-
25
-
-
77955660664
-
Biology and biotechnology of trichoderma
-
Schuster A, Schmoll M. Biology and biotechnology of Trichoderma. Appl Microbiol Biotechnol 2010; 87(3): 787-799.
-
(2010)
Appl Microbiol Biotechnoly
, vol.87
, Issue.3
, pp. 787-799
-
-
Schuster, A.1
Schmoll, M.2
-
26
-
-
36348976352
-
Systems biology of antibiotic production by microorganisms
-
Rokem JS, Lantz AE, Nielsen J. Systems biology of antibiotic production by microorganisms. Nat Prod Rep 2007; 24(6): 1262-1287.
-
(2007)
Nat Prod Rep
, vol.24
, Issue.6
, pp. 1262-1287
-
-
Rokem, J.S.1
Lantz, A.E.2
Nielsen, J.3
-
27
-
-
84871398239
-
Re-annotation of the CAZy genes of Trichoderma reesei and transcription in the presence of lignocellulosic substrates
-
Hakkinen M, Arvas M, Oja M, et al. Re-annotation of the CAZy genes of Trichoderma reesei and transcription in the presence of lignocellulosic substrates. Microb Cell Fact 2012; 11: 134.
-
(2012)
Microb Cell Fact
, vol.11
, pp. 134
-
-
Hakkinen, M.1
Arvas, M.2
Oja, M.3
-
28
-
-
0010392177
-
The panlabs penicillin strain improvement program
-
Vanek Z Hostá Lek Z Eds. Boston MA: Butterworths
-
Lein J. The Panlabs penicillin strain improvement program. In: Vanek Z, Hostá lek Z, eds. Overproduction of Microbial Metabolites. Boston, MA: Butterworths, 1986: 105-139.
-
(1986)
Overproduction of Microbial Metabolites
, pp. 105-139
-
-
Lein, J.1
-
30
-
-
0036568599
-
Filamentous fungi as cell factories for heterologous protein production
-
Punt PJ, van Biezen N, Conesa A, et al. Filamentous fungi as cell factories for heterologous protein production. Trends Biotechnol 2002; 20(5): 200-206.
-
(2002)
Trends Biotechnol
, vol.20
, Issue.5
, pp. 200-206
-
-
Punt, P.J.1
Van Biezen, N.2
Conesa, A.3
-
31
-
-
84877881315
-
Towards better understanding of an industrial cell factory: Investigating the feasibility of real-time metabolic flux analysis in Pichia pastoris
-
Fazenda ML, Dias JM, Harvey LM, et al. Towards better understanding of an industrial cell factory: Investigating the feasibility of real-time metabolic flux analysis in Pichia pastoris. Microb Cell Fact 2013; 12: 51.
-
(2013)
Microb Cell Fact
, vol.12
, pp. 51
-
-
Fazenda, M.L.1
Dias, J.M.2
Harvey, L.M.3
-
34
-
-
0034887468
-
Quantification of autolysis in Penicillium chrysogenum by semiautomated image analysis
-
McIntyre M, Eade JK, Cox PW, et al. Quantification of autolysis in Penicillium chrysogenum by semiautomated image analysis. Can J Microbiol 2001; 47(4): 315-321.
-
(2001)
Can J Microbiol
, vol.47
, Issue.4
, pp. 315-321
-
-
McIntyre, M.1
Eade, J.K.2
Cox, P.W.3
-
35
-
-
0037420418
-
Pulsed addition of limiting-carbon during Aspergillus oryzae fermentation leads to improved productivity of a recombinant enzyme
-
Bhargava S, Wenger KS, Marten MR. Pulsed addition of limiting-carbon during Aspergillus oryzae fermentation leads to improved productivity of a recombinant enzyme. Biotechnol Bioeng 2003; 82(1): 111-117.
-
(2003)
Biotechnol Bioeng
, vol.82
, Issue.1
, pp. 111-117
-
-
Bhargava, S.1
Wenger, K.S.2
Marten, M.R.3
-
36
-
-
0035068997
-
Metabolic engineering
-
Nielsen J. Metabolic engineering. Appl Microbiol Biotechnol 2001; 55(3): 263- 283.
-
(2001)
Appl Microbiol Biotechnol
, vol.55
, Issue.3
, pp. 263-283
-
-
Nielsen, J.1
-
37
-
-
0025895183
-
Toward a science of metabolic engineering
-
Bailey JE. Toward a science of metabolic engineering. Science 1991; 252(5013): 1668-1675.
-
(1991)
Science
, vol.252
, Issue.5013
, pp. 1668-1675
-
-
Bailey, J.E.1
-
38
-
-
0032485833
-
Metabolic engineering: Techniques for analysis of targets for genetic manipulations
-
Nielsen J. Metabolic engineering: Techniques for analysis of targets for genetic manipulations. Biotechnol Bioeng 1998; 58(2-3): 125-132.
-
(1998)
Biotechnol Bioeng
, vol.58
, Issue.2-3
, pp. 125-132
-
-
Nielsen, J.1
-
40
-
-
1542299137
-
The effect of CreA in glucose and xylose catabolism in Aspergillus nidulans
-
Prathumpai W, McIntyre M, Nielsen J. The effect of CreA in glucose and xylose catabolism in Aspergillus nidulans. Appl Microbiol Biotechnol 2004; 63(6): 748- 753.
-
(2004)
Appl Microbiol Biotechnol
, vol.63
, Issue.6
, pp. 748-753
-
-
Prathumpai, W.1
McIntyre, M.2
Nielsen, J.3
-
41
-
-
39849090022
-
Enhanced citrate production through gene insertion in Aspergillus niger
-
de Jongh WA, Nielsen J. Enhanced citrate production through gene insertion in Aspergillus niger. Metab Eng 2008; 10(2): 87-96.
-
(2008)
Metab Eng
, vol.10
, Issue.2
, pp. 87-96
-
-
De Jongh, W.A.1
Nielsen, J.2
-
42
-
-
0035916383
-
Quantitative analysis of Penicillium chrysogenum Wis54-1255 transformants overexpressing the penicillin biosynthetic genes
-
Theilgaard H, van Den Berg M, Mulder C, et al. Quantitative analysis of Penicillium chrysogenum Wis54-1255 transformants overexpressing the penicillin biosynthetic genes. Biotechnol Bioeng 2001; 72(4): 379-388.
-
(2001)
Biotechnol Bioeng
, vol.72
, Issue.4
, pp. 379-388
-
-
Theilgaard, H.1
Van Den Berg, M.2
Mulder, C.3
-
43
-
-
0033916304
-
Construction and characterization of an oxalic acid nonproducing strain of aspergillus niger
-
Pedersen H, Christensen B, Hjort C, et al. Construction and characterization of an oxalic acid nonproducing strain of Aspergillus niger. Metab Eng 2000; 2(1): 34-41.
-
(2000)
Metab Eng
, vol.2
, Issue.1
, pp. 34-41
-
-
Pedersen, H.1
Christensen, B.2
Hjort, C.3
-
44
-
-
84879292930
-
Targeting enzymes to the right compartment: Metabolic engineering for itaconic acid production by Aspergillus niger
-
Blumhoff ML, Steiger MG, Mattanovich D, et al. Targeting enzymes to the right compartment: Metabolic engineering for itaconic acid production by Aspergillus niger. Metab Eng 2013; 19C: 26-32.
-
(2013)
Metab Eng
, vol.19 C
, pp. 26-32
-
-
Blumhoff, M.L.1
Steiger, M.G.2
Mattanovich, D.3
-
45
-
-
0034788786
-
Physiological characterisation of Penicillium chrysogenum strains expressing the expandase gene from Streptomyces clavuligerus during batch cultivations. Growth and adipoyl-7- aminodeacetoxycephalosporanic acid production
-
Robin J, Jakobsen M, Beyer M, et al. Physiological characterisation of Penicillium chrysogenum strains expressing the expandase gene from Streptomyces clavuligerus during batch cultivations. Growth and adipoyl-7- aminodeacetoxycephalosporanic acid production. Appl Microbiol Biotechnol 2001; 57(3): 357-362.
-
(2001)
Appl Microbiol Biotechnol
, vol.57
, Issue.3
, pp. 357-362
-
-
Robin, J.1
Jakobsen, M.2
Beyer, M.3
-
46
-
-
0041508906
-
Metabolic control analysis of xylose catabolism in Aspergillus
-
Prathumpai W, Gabelgaard JB, Wanchanthuek P, et al. Metabolic control analysis of xylose catabolism in Aspergillus. 2003; Biotechnol Prog 19 (4): 1136-1141.
-
(2003)
Biotechnol Prog
, vol.19
, Issue.4
, pp. 1136-1141
-
-
Prathumpai, W.1
Gabelgaard, J.B.2
Wanchanthuek, P.3
-
47
-
-
28844474829
-
Metabolic control analysis of Aspergillus niger L-arabinose catabolism
-
de Groot MJ, Prathumpai W, Visser J, et al. Metabolic control analysis of Aspergillus niger L-arabinose catabolism. Biotechnol Prog 2005; 21(6): 1610-1616.
-
(2005)
Biotechnol Prog
, vol.21
, Issue.6
, pp. 1610-1616
-
-
De Groot, M.J.1
Prathumpai, W.2
Visser, J.3
-
48
-
-
0033019615
-
Metabolic control analysis of the penicillin biosynthetic pathway: The influence of the LLD-ACV: BisACV ratio on the flux control
-
Theilgaard HA, Nielsen J. Metabolic control analysis of the penicillin biosynthetic pathway: The influence of the LLD-ACV: bisACV ratio on the flux control. Antonie Van Leeuwenhoek 1999; 75(1-2): 145-154.
-
(1999)
Antonie Van Leeuwenhoek
, vol.75
, Issue.1-2
, pp. 145-154
-
-
Theilgaard, H.A.1
Nielsen, J.2
-
49
-
-
22144496793
-
CreA influences the metabolic fluxes of Aspergillus nidulans during growth on glucose and xylose
-
David H, Krogh AM, Roca C, et al. CreA influences the metabolic fluxes of Aspergillus nidulans during growth on glucose and xylose. Microbiology 2005; 151(Pt 7): 2209-2221.
-
(2005)
Microbiology
, vol.151
, Issue.PART 7
, pp. 2209-2221
-
-
David, H.1
Krogh, A.M.2
Roca, C.3
-
50
-
-
33845638400
-
Cytosolic NADPH metabolism in penicillin-G producing and non-producing chemostat cultures of Penicillium chrysogenum
-
Kleijn RJ, Liu F, van Winden WA, et al. Cytosolic NADPH metabolism in penicillin-G producing and non-producing chemostat cultures of Penicillium chrysogenum. Metab Eng 2007; 9(1): 112-123.
-
(2007)
Metab Eng
, vol.9
, Issue.1
, pp. 112-123
-
-
Kleijn, R.J.1
Liu, F.2
Van Winden, W.A.3
-
51
-
-
0033844230
-
Metabolic characterization of high- and low-yielding strains of Penicillium chrysogenum
-
Christensen B, Thykaer J, Nielsen J. Metabolic characterization of high- and low-yielding strains of Penicillium chrysogenum. Appl Microbiol Biotechnol 2000; 54(2): 212-217.
-
(2000)
Appl Microbiol Biotechnol
, vol.54
, Issue.2
, pp. 212-217
-
-
Christensen, B.1
Thykaer, J.2
Nielsen, J.3
-
52
-
-
0036526342
-
Metabolic network analysis of an adipoyl-7- ADCA-producing strain of Penicillium chrysogenum: Elucidation of adipate degradation
-
Thykaer J, Christensen B, Nielsen J. Metabolic network analysis of an adipoyl-7- ADCA-producing strain of Penicillium chrysogenum: Elucidation of adipate degradation. Metab Eng 2002; 4(2): 151-158.
-
(2002)
Metab Eng
, vol.4
, Issue.2
, pp. 151-158
-
-
Thykaer, J.1
Christensen, B.2
Nielsen, J.3
-
53
-
-
0035232377
-
Evolutionary engineering of industrially important microbial phenotypes
-
Sauer U. Evolutionary engineering of industrially important microbial phenotypes. Adv Biochem Eng Biotechnol 2001; 73: 129-169.
-
(2001)
Adv Biochem Eng Biotechnol
, vol.73
, pp. 129-169
-
-
Sauer, U.1
-
54
-
-
21744438324
-
Evolutionary engineering of mixedsugar utilization by a xylose-fermenting Saccharomyces cerevisiae strain
-
Kuyper M, Toirkens MJ, Diderich JA, et al. Evolutionary engineering of mixedsugar utilization by a xylose-fermenting Saccharomyces cerevisiae strain. FEMS Yeast Res 2005; 5(10): 925-934.
-
(2005)
FEMS Yeast Res
, vol.5
, Issue.10
, pp. 925-934
-
-
Kuyper, M.1
Toirkens, M.J.2
Diderich, J.A.3
-
55
-
-
77953368385
-
Improved xylose and arabinose utilization by an industrial recombinant Saccharomyces cerevisiae strain using evolutionary engineering
-
Garcia Sanchez R, Karhumaa K, Fonseca C, et al. Improved xylose and arabinose utilization by an industrial recombinant Saccharomyces cerevisiae strain using evolutionary engineering. Biotechnol Biofuels 2010; 3: 13.
-
(2010)
Biotechnol Biofuels
, Issue.3
, pp. 13
-
-
Garcia Sanchez, R.1
Karhumaa, K.2
Fonseca, C.3
-
56
-
-
0028971232
-
Induction and repression of alpha-amylase production in batch and continuous cultures of Aspergillus oryzae
-
Morkeberg R, Carlsen M, Nielsen J. Induction and repression of alpha-amylase production in batch and continuous cultures of Aspergillus oryzae. Microbiology 1995; 141(Pt 10): 2449-2454.
-
(1995)
Microbiology
, vol.141 PART.10
, pp. 2449-2454
-
-
Morkeberg, R.1
Carlsen, M.2
Nielsen, J.3
-
57
-
-
0034072040
-
Glucoamylase production in batch, chemostat and fed-batch cultivations by an industrial strain of Aspergillus niger
-
Pedersen H, Beyer M, Nielsen J. Glucoamylase production in batch, chemostat and fed-batch cultivations by an industrial strain of Aspergillus niger. Appl Microbiol Biotechnol 2000; 53(3): 272-277.
-
(2000)
Appl Microbiol Biotechnol
, vol.53
, Issue.3
, pp. 272-277
-
-
Pedersen, H.1
Beyer, M.2
Nielsen, J.3
-
58
-
-
0034691228
-
Application of metabolic flux analysis for the identification of metabolic bottlenecks in the biosynthesis of penicillin- G
-
van Gulik WM, de Laat WT, Vinke JL, et al. Application of metabolic flux analysis for the identification of metabolic bottlenecks in the biosynthesis of penicillin- G. Biotechnol Bioeng 2000; 68(6): 602-618.
-
(2000)
Biotechnol Bioeng
, vol.68
, Issue.6
, pp. 602-618
-
-
Van Gulik, W.M.1
De Laat, W.T.2
Vinke, J.L.3
-
59
-
-
84866045772
-
Aspergilli: Systems biology and industrial applications
-
Knuf C, Nielsen J. Aspergilli: Systems biology and industrial applications. Biotechnol J 2012; 7(9): 1147-1155.
-
(2012)
Biotechnol J
, vol.7
, Issue.9
, pp. 1147-1155
-
-
Knuf, C.1
Nielsen, J.2
-
60
-
-
84872184440
-
Systems biological approaches towards understanding cellulase production by Trichoderma reesei
-
Kubicek CP. Systems biological approaches towards understanding cellulase production by Trichoderma reesei. J Biotechnol 2013; 163(2): 133-142.
-
(2013)
J Biotechnol
, vol.163
, Issue.2
, pp. 133-142
-
-
Kubicek, C.P.1
-
61
-
-
79951771512
-
Aspergillus as a multi-purpose cell factory: Current status and perspectives
-
Meyer V, Wu B, Ram AF. Aspergillus as a multi-purpose cell factory: Current status and perspectives. Biotechnol Lett 2011; 33(3): 469-476.
-
(2011)
Biotechnol Lett
, vol.33
, Issue.3
, pp. 469-476
-
-
Meyer, V.1
Wu, B.2
Ram, A.F.3
-
62
-
-
37349079028
-
A metabolome study of the steadystate relation between central metabolism, amino acid biosynthesis and penicillin production in Penicillium chrysogenum
-
Nasution U, van Gulik WM, Ras C, et al. A metabolome study of the steadystate relation between central metabolism, amino acid biosynthesis and penicillin production in Penicillium chrysogenum. Metab Eng 2008; 10(1): 10-23.
-
(2008)
Metab Eng
, vol.10
, Issue.1
, pp. 10-23
-
-
Nasution, U.1
Van Gulik, W.M.2
Ras, C.3
-
63
-
-
77953172467
-
Proteome analysis of the penicillin producer Penicillium chrysogenum: Characterization of protein changes during the industrial strain improvement
-
Jami MS, Barreiro C, Garcia-Estrada C, et al. Proteome analysis of the penicillin producer Penicillium chrysogenum: Characterization of protein changes during the industrial strain improvement. Mol Cell Proteomics 2010; 9(6): 1182-1198.
-
(2010)
Mol Cell Proteomics
, vol.9
, Issue.6
, pp. 1182-1198
-
-
Jami, M.S.1
Barreiro, C.2
Garcia-Estrada, C.3
-
64
-
-
84871922128
-
Comparative metabolomic study of Penicillium chrysogenum during pilot and industrial penicillin fermentations
-
Ding MZ, Lu H, Cheng JS, et al. Comparative metabolomic study of Penicillium chrysogenum during pilot and industrial penicillin fermentations. Appl Biochem Biotechnol 2012; 168(5): 1223-1238.
-
(2012)
Appl Biochem Biotechnol
, vol.168
, Issue.5
, pp. 1223-1238
-
-
Ding, M.Z.1
Lu, H.2
Cheng, J.S.3
-
65
-
-
84862174574
-
Metabolic engineering of b-oxidation in Penicillium chrysogenum for improved semi-synthetic cephalosporin biosynthesis
-
Veiga T, Gombert AK, Landes N, et al. Metabolic engineering of b-oxidation in Penicillium chrysogenum for improved semi-synthetic cephalosporin biosynthesis. Metab Eng 2012; 14(4): 437-448.
-
(2012)
Metab Eng
, vol.14
, Issue.4
, pp. 437-448
-
-
Veiga, T.1
Gombert, A.K.2
Landes, N.3
-
66
-
-
61349165717
-
Exploring and dissecting genome-wide gene expression responses of Penicillium chrysogenum to phenylacetic acid consumption and penicillin G production
-
Harris DM, van der Krogt ZA, Klaassen P, et al. Exploring and dissecting genome-wide gene expression responses of Penicillium chrysogenum to phenylacetic acid consumption and penicillin G production. BMC Genomics 2009; 10: 75.
-
(2009)
BMC Genomics
, vol.10
, pp. 75
-
-
Harris, D.M.1
Van Der Krogt, Z.A.2
Klaassen, P.3
-
67
-
-
61349128396
-
Engineering of Penicillium chrysogenum for fermentative production of a novel carbamoylated cephem antibiotic precursor
-
Harris DM, Westerlaken I, Schipper D, et al. Engineering of Penicillium chrysogenum for fermentative production of a novel carbamoylated cephem antibiotic precursor. Metab Eng 2009; 11(2): 125-137.
-
(2009)
Metab Eng
, vol.11
, Issue.2
, pp. 125-137
-
-
Harris, D.M.1
Westerlaken, I.2
Schipper, D.3
-
68
-
-
84866145069
-
Uncovering the genome-wide transcriptional responses of the filamentous fungus Aspergillus niger to lignocellulose using RNA sequencing
-
Delmas S, Pullan ST, Gaddipati S, et al. Uncovering the genome-wide transcriptional responses of the filamentous fungus Aspergillus niger to lignocellulose using RNA sequencing. PLoS Genet 2012; 8(8): e1002875.
-
(2012)
PLoS Genet
, vol.8
, Issue.8
-
-
Delmas, S.1
Pullan, S.T.2
Gaddipati, S.3
-
69
-
-
71349084112
-
Genome-wide analysis of maltose utilization and regulation in aspergilli
-
Vongsangnak W, Salazar M, Hansen K, et al. Genome-wide analysis of maltose utilization and regulation in aspergilli. Microbiology 2009; 155(Pt 12): 3893-3902.
-
(2009)
Microbiology
, vol.155
, Issue.PART 12
, pp. 3893-3902
-
-
Vongsangnak, W.1
Salazar, M.2
Hansen, K.3
-
70
-
-
79957520910
-
The CRE1 carbon catabolite repressor of the fungus Trichoderma reesei: A master regulator of carbon assimilation
-
Portnoy T, Margeot A, Linke R, et al. The CRE1 carbon catabolite repressor of the fungus Trichoderma reesei: A master regulator of carbon assimilation. BMC Genomics 2011; 12: 269.
-
(2011)
BMC Genomics
, vol.12
, pp. 269
-
-
Portnoy, T.1
Margeot, A.2
Linke, R.3
-
71
-
-
84881161294
-
Genome-wide transcriptional response of Trichoderma reesei to lignocellulose using RNA sequencing and comparison with Aspergillus niger
-
Ries L, Pullan ST, Delmas S, et al. Genome-wide transcriptional response of Trichoderma reesei to lignocellulose using RNA sequencing and comparison with Aspergillus niger. BMC Genomics 2013; 14: 541.
-
(2013)
BMC Genomics
, vol.14
, pp. 541
-
-
Ries, L.1
Pullan, S.T.2
Delmas, S.3
-
72
-
-
84880365451
-
Insights into enzyme secretion by filamentous fungi: Comparative proteome analysis of Trichoderma reesei grown on different carbon sources
-
Jun H, Guangye H, Daiwen C. Insights into enzyme secretion by filamentous fungi: Comparative proteome analysis of Trichoderma reesei grown on different carbon sources. J Proteomics 2013; 89: 191-201.
-
(2013)
J Proteomics
, vol.89
, pp. 191-201
-
-
Jun, H.1
Guangye, H.2
Daiwen, C.3
-
73
-
-
71349083307
-
Uncovering transcriptional regulation of glycerol metabolism in Aspergilli through genome-wide gene expression data analysis
-
Salazar M, Vongsangnak W, Panagiotou G, et al. Uncovering transcriptional regulation of glycerol metabolism in Aspergilli through genome-wide gene expression data analysis. Mol Genet Genomics 2009; 282(6): 571-586.
-
(2009)
Mol Genet Genomics
, vol.282
, Issue.6
, pp. 571-586
-
-
Salazar, M.1
Vongsangnak, W.2
Panagiotou, G.3
-
74
-
-
80054118479
-
Transcriptome analysis of Aspergillus niger grown on sugarcane bagasse
-
de Souza WR, de Gouvea PF, Savoldi M, et al. Transcriptome analysis of Aspergillus niger grown on sugarcane bagasse. Biotechnol Biofuels 2011; 4: 40.
-
(2011)
Biotechnol Biofuels
, Issue.4
, pp. 40
-
-
De Souza, W.R.1
De Gouvea, P.F.2
Savoldi, M.3
-
75
-
-
84872827801
-
Mapping the polysaccharide degradation potential of Aspergillus niger
-
Andersen MR, Giese M, de Vries RP, et al. Mapping the polysaccharide degradation potential of Aspergillus niger. BMC Genomics 2012; 13: 313.
-
(2012)
BMC Genomics
, vol.13
, pp. 313
-
-
Andersen, M.R.1
Giese, M.2
De Vries, R.P.3
-
76
-
-
79953138924
-
Integrated analysis of the global transcriptional response to alpha-amylase over-production by Aspergillus oryzae
-
Vongsangnak W, Hansen K, Nielsen J. Integrated analysis of the global transcriptional response to alpha-amylase over-production by Aspergillus oryzae. Biotechnol Bioeng 2011; 108(5): 1130-1139.
-
(2011)
Biotechnol Bioeng
, vol.108
, Issue.5
, pp. 1130-1139
-
-
Vongsangnak, W.1
Hansen, K.2
Nielsen, J.3
-
77
-
-
79959214917
-
Proteomic analysis of the secretory response of Aspergillus niger to D-maltose and D-xylose
-
de Oliveira JM, van Passel MW, Schaap PJ, et al. Proteomic analysis of the secretory response of Aspergillus niger to D-maltose and D-xylose. PLoS One 2011; 6(6): e20865.
-
(2011)
PLoS One
, vol.6
, Issue.6
-
-
De Oliveira, J.M.1
Van Passel, M.W.2
Schaap, P.J.3
-
78
-
-
83655197847
-
Correlation of gene expression and protein production rate - A system wide study
-
Arvas M, Pakula T, Smit B, et al. Correlation of gene expression and protein production rate-a system wide study. BMC Genomics 2011; 12: 616.
-
(2011)
BMC Genomics
, vol.12
, pp. 616
-
-
Arvas, M.1
Pakula, T.2
Smit, B.3
-
79
-
-
84870862525
-
The transcriptomic fingerprint of glucoamylase over-expression in Aspergillus niger
-
Kwon MJ, Jorgensen TR, Nitsche BM, et al. The transcriptomic fingerprint of glucoamylase over-expression in Aspergillus niger. BMC Genomics 2012; 13: 701.
-
(2012)
BMC Genomics
, vol.13
, pp. 701
-
-
Kwon, M.J.1
Jorgensen, T.R.2
Nitsche, B.M.3
-
80
-
-
60549083506
-
Transcriptomic comparison of Aspergillus niger growing on two different sugars reveals coordinated regulation of the secretory pathway
-
Jorgensen TR, Goosen T, Hondel CA, et al. Transcriptomic comparison of Aspergillus niger growing on two different sugars reveals coordinated regulation of the secretory pathway. BMC Genomics 2009; 10: 44.
-
(2009)
BMC Genomics
, vol.10
, pp. 44
-
-
Jorgensen, T.R.1
Goosen, T.2
Hondel, C.A.3
-
81
-
-
77950948619
-
The intra- and extracellular proteome of Aspergillus niger growing on defined medium with xylose or maltose as carbon substrate
-
Lu X, Sun J, Nimtz M, et al. The intra- and extracellular proteome of Aspergillus niger growing on defined medium with xylose or maltose as carbon substrate. Microb Cell Fact 2010; 9: 23.
-
(2010)
Microb Cell Fact
, vol.9
, pp. 23
-
-
Lu, X.1
Sun, J.2
Nimtz, M.3
-
82
-
-
66449127673
-
Systemic analysis of the response of aspergillus niger to ambient pH
-
Andersen MR, Lehmann L, Nielsen J. Systemic analysis of the response of Aspergillus niger to ambient pH. Genome Biol 2009; 10(5): R47.
-
(2009)
Genome Biol
, vol.10
, Issue.5
-
-
Andersen, M.R.1
Lehmann, L.2
Nielsen, J.3
-
83
-
-
84884186067
-
Investigation of malic acid production in Aspergillus oryzae under nitrogen starvation conditions
-
Knuf C, Nookaew I, Brown SH, et al. Investigation of malic acid production in Aspergillus oryzae under nitrogen starvation conditions. Appl Environ Microbiol 2013; 79(19): 6050-6058.
-
(2013)
Appl Environ Microbiol
, vol.79
, Issue.19
, pp. 6050-6058
-
-
Knuf, C.1
Nookaew, I.2
Brown, S.H.3
-
84
-
-
79954632227
-
A clone-based transcriptomics approach for the identification of genes relevant for itaconic acid production in Aspergillus
-
Li A, van Luijk N, Ter Beek M, et al. A clone-based transcriptomics approach for the identification of genes relevant for itaconic acid production in Aspergillus. Fungal Genet Biol 2011; 48(6): 602-611.
-
(2011)
Fungal Genet Biol
, vol.48
, Issue.6
, pp. 602-611
-
-
Li, A.1
Van Luijk, N.2
Ter Beek, M.3
-
85
-
-
41949120307
-
A trispecies aspergillus microarray: Comparative transcriptomics of three aspergillus species
-
Andersen MR, Vongsangnak W, Panagiotou G, et al. A trispecies Aspergillus microarray: Comparative transcriptomics of three Aspergillus species. Proc Natl Acad Sci 2008; 105(11): 4387-4392.
-
(2008)
Proc Natl Acad Sci
, vol.105
, Issue.11
, pp. 4387-4392
-
-
Andersen, M.R.1
Vongsangnak, W.2
Panagiotou, G.3
-
86
-
-
33745713819
-
Transcription analysis using highdensity micro-arrays of Aspergillus nidulans wild-type and creA mutant during growth on glucose or ethanol
-
Mogensen J, Nielsen HB, Hofmann G, et al. Transcription analysis using highdensity micro-arrays of Aspergillus nidulans wild-type and creA mutant during growth on glucose or ethanol. Fungal Genet Biol 2006; 43(8): 593-603.
-
(2006)
Fungal Genet Biol
, vol.43
, Issue.8
, pp. 593-603
-
-
Mogensen, J.1
Nielsen, H.B.2
Hofmann, G.3
|