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Volumn 5, Issue 5, 2013, Pages

Rescuing stalled or damaged replication forks

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIA (MICROORGANISMS); EUKARYOTA; PROKARYOTA;

EID: 84877150263     PISSN: None     EISSN: 19430264     Source Type: Journal    
DOI: 10.1101/cshperspect.a012815     Document Type: Article
Times cited : (186)

References (117)
  • 1
    • 80052159311 scopus 로고    scopus 로고
    • Coordinated protein and DNA remodeling by human HLTF on stalled replication fork
    • Achar Y.J., Balogh D, Haracska L. 2011. Coordinated protein and DNA remodeling by human HLTF on stalled replication fork. Proc Natl Acad Sci 108: 14073-14078.
    • (2011) Proc Natl Acad Sci , vol.108 , pp. 14073-14078
    • Achar, Y.J.1    Balogh, D.2    Haracska, L.3
  • 2
    • 39449096135 scopus 로고    scopus 로고
    • Genome instability: A mechanistic view of its causes and consequences
    • Aguilera A., Gomez-Gonzalez B. 2008. Genome instability: A mechanistic view of its causes and consequences. Nat Rev Genet 9: 204-217.
    • (2008) Nat Rev Genet , vol.9 , pp. 204-217
    • Aguilera, A.1    Gomez-Gonzalez, B.2
  • 3
    • 67649655954 scopus 로고    scopus 로고
    • Drosophila MUS312 and the vertebrate ortholog BTBD12 interact with DNA structure-specific endonucleases in DNA repair and recombination
    • Andersen S.L., Bergstralh DT, Kohl KP, LaRocque JR, Moore C.B., Sekelsky J. 2009. Drosophila MUS312 and the vertebrate ortholog BTBD12 interact with DNA structure-specific endonucleases in DNA repair and recombination. Mol Cell 35: 128-135.
    • (2009) Mol Cell , vol.35 , pp. 128-135
    • Andersen, S.L.1    Bergstralh, D.T.2    Kohl, K.P.3    LaRocque, J.R.4    Moore, C.B.5    Sekelsky, J.6
  • 4
    • 0028022751 scopus 로고
    • DNA replication triggered by double-stranded breaks in E. coli: Dependence on homologous recombination functions
    • Asai T., Bates DB, Kogoma T. 1994. DNA replication triggered by double-stranded breaks in E. coli: Dependence on homologous recombination functions. Cell 78: 1051-1061.
    • (1994) Cell , vol.78 , pp. 1051-1061
    • Asai, T.1    Bates, D.B.2    Kogoma, T.3
  • 5
    • 67649862225 scopus 로고    scopus 로고
    • Replication fork reversal and the maintenance of genome stability
    • Atkinson J., McGlynn P. 2009. Replication fork reversal and the maintenance of genome stability. Nucleic Acids Res 37: 3475-3492.
    • (2009) Nucleic Acids Res , vol.37 , pp. 3475-3492
    • Atkinson, J.1    McGlynn, P.2
  • 6
    • 34547630147 scopus 로고    scopus 로고
    • Inactivation of the DnaB helicase leads to the collapse and degradation of the replication fork: A comparison to UVinduced arrest
    • Belle J.J., Casey A, Courcelle CT, Courcelle J. 2007. Inactivation of the DnaB helicase leads to the collapse and degradation of the replication fork: A comparison to UVinduced arrest. J Bacteriol 189: 5452-5462.
    • (2007) J Bacteriol , vol.189 , pp. 5452-5462
    • Belle, J.J.1    Casey, A.2    Courcelle, C.T.3    Courcelle, J.4
  • 9
    • 35148847451 scopus 로고    scopus 로고
    • Yeast Rad5 protein required for postreplication repair has a DNA helicase activity specific for replication fork regression
    • Blastyak A., Pinter L, Unk I, Prakash L, Prakash S, Haracska L. 2007. Yeast Rad5 protein required for postreplication repair has a DNA helicase activity specific for replication fork regression. Mol Cell 28: 167-175.
    • (2007) Mol Cell , vol.28 , pp. 167-175
    • Blastyak, A.1    Pinter, L.2    Unk, I.3    Prakash, L.4    Prakash, S.5    Haracska, L.6
  • 10
    • 77649165394 scopus 로고    scopus 로고
    • Maintaining genome stability at the replication fork
    • Branzei D., Foiani M. 2010. Maintaining genome stability at the replication fork. Nat Rev Mol Cell Biol 11: 208-219.
    • (2010) Nat Rev Mol Cell Biol , vol.11 , pp. 208-219
    • Branzei, D.1    Foiani, M.2
  • 11
    • 18244371925 scopus 로고    scopus 로고
    • Functional uncoupling of MCM helicase and DNA polymerase activities activates the ATR-dependent checkpoint
    • Byun T.S., Pacek M, Yee M-C, Walter JC, Cimprich KA. 2005. Functional uncoupling of MCM helicase and DNA polymerase activities activates the ATR-dependent checkpoint. Genes Dev 19: 1040-1052.
    • (2005) Genes Dev , vol.19 , pp. 1040-1052
    • Byun, T.S.1    Pacek, M.2    Yee, M.-C.3    Walter, J.C.4    Cimprich, K.A.5
  • 12
    • 0016769419 scopus 로고
    • The replication time of the Escherichia coli K12 chromosome as a function of cell doubling time
    • Chandler M., Bird RE, Caro L. 1975. The replication time of the Escherichia coli K12 chromosome as a function of cell doubling time. J Mol Biol 94: 127-132.
    • (1975) J Mol Biol , vol.94 , pp. 127-132
    • Chandler, M.1    Bird, R.E.2    Caro, L.3
  • 13
    • 29144486147 scopus 로고    scopus 로고
    • Replisome instability, fork collapse, and gross chromosomal rearrangements arise synergistically from Mec1 kinase and RecQ helicase mutations
    • Cobb J.A., Schleker T, Rojas V, Bjergbaek L, Tercero JA, Gasser SM. 2005. Replisome instability, fork collapse, and gross chromosomal rearrangements arise synergistically from Mec1 kinase and RecQ helicase mutations. Genes Dev 19: 3055-3069.
    • (2005) Genes Dev , vol.19 , pp. 3055-3069
    • Cobb, J.A.1    Schleker, T.2    Rojas, V.3    Bjergbaek, L.4    Tercero, J.A.5    Gasser, S.M.6
  • 14
    • 80053330162 scopus 로고    scopus 로고
    • Brca2, Rad51 and Mre11: Performing balancing acts on replication forks
    • Costanzo V. 2011. Brca2, Rad51 and Mre11: Performing balancing acts on replication forks. DNA Repair (Amst) 10: 1060-1065.
    • (2011) DNA Repair (Amst) , vol.10 , pp. 1060-1065
    • Costanzo, V.1
  • 15
    • 11344268431 scopus 로고    scopus 로고
    • Exo1 processes stalled replication forks and counteracts fork reversal in checkpoint-defective cells
    • Cotta-Ramusino C, Fachinetti D, Lucca C, Doksani Y, Lopes M., Sogo J, Foiani M. 2005. Exo1 processes stalled replication forks and counteracts fork reversal in checkpoint-defective cells. Mol Cell 17: 153-159.
    • (2005) Mol Cell , vol.17 , pp. 153-159
    • Cotta-Ramusino, C.1    Fachinetti, D.2    Lucca, C.3    Doksani, Y.4    Lopes, M.5    Sogo, J.6    Foiani, M.7
  • 16
    • 0348047324 scopus 로고    scopus 로고
    • RecA-dependent recovery of arrested DNA replication forks
    • Courcelle J., Hanawalt PC. 2003. RecA-dependent recovery of arrested DNA replication forks. Annu Rev Genet 37: 611-646.
    • (2003) Annu Rev Genet , vol.37 , pp. 611-646
    • Courcelle, J.1    Hanawalt, P.C.2
  • 17
    • 0032916453 scopus 로고    scopus 로고
    • Recovery of DNA replication in UV-irradiated Escherichia coli requires both excision repair and RecF protein function
    • Courcelle J., Crowley DJ, Hanawalt PC. 1999. Recovery of DNA replication in UV-irradiated Escherichia coli requires both excision repair and RecF protein function. J Bacteriol 181: 916-922.
    • (1999) J Bacteriol , vol.181 , pp. 916-922
    • Courcelle, J.1    Crowley, D.J.2    Hanawalt, P.C.3
  • 18
    • 0037436108 scopus 로고    scopus 로고
    • DNA damage-induced replication fork regression and processing in Escherichia coli
    • Courcelle J., Donaldson JR, Chow KH, Courcelle CT. 2003. DNA damage-induced replication fork regression and processing in Escherichia coli. Science 299: 1064-1067.
    • (2003) Science , vol.299 , pp. 1064-1067
    • Courcelle, J.1    Donaldson, J.R.2    Chow, K.H.3    Courcelle, C.T.4
  • 19
    • 26444573211 scopus 로고    scopus 로고
    • Nucleotide excision repair or polymerase V-mediated lesion bypass can act to restore UV-arrested replication forks in Escherichia coli
    • Courcelle C.T., Belle JJ, Courcelle J. 2005. Nucleotide excision repair or polymerase V-mediated lesion bypass can act to restore UV-arrested replication forks in Escherichia coli. J Bacteriol 187: 6953-6961.
    • (2005) J Bacteriol , vol.187 , pp. 6953-6961
    • Courcelle, C.T.1    Belle, J.J.2    Courcelle, J.3
  • 20
    • 77953694683 scopus 로고    scopus 로고
    • Ubiquitin-dependent DNA damage bypass is separable from genome replication
    • Daigaku Y., Davies AA, Ulrich HD. 2010. Ubiquitin-dependent DNA damage bypass is separable from genome replication. Nature 465: 951-955.
    • (2010) Nature , vol.465 , pp. 951-955
    • Daigaku, Y.1    Davies, A.A.2    Ulrich, H.D.3
  • 22
    • 63049134689 scopus 로고    scopus 로고
    • The unnamed complex:What dowe know about Smc5-Smc6?
    • De Piccoli G, Torres-Rosell J, Aragon L. 2009. The unnamed complex:What dowe know about Smc5-Smc6? Chromosome Res 17: 251-263.
    • (2009) Chromosome Res , vol.17 , pp. 251-263
    • de Piccoli, G.1    Torres-Rosell, J.2    Aragon, L.3
  • 23
    • 84858053395 scopus 로고    scopus 로고
    • Replisome stability at defective DNA replication forks is independent of S phase checkpoint kinases
    • De Piccoli G, Katou Y, Itoh T, Nakato R, Shirahige K, Labib K. 2012. Replisome stability at defective DNA replication forks is independent of S phase checkpoint kinases. Mol Cell 45: 696-704.
    • (2012) Mol Cell , vol.45 , pp. 696-704
    • de Piccoli, G.1    Katou, Y.2    Itoh, T.3    Nakato, R.4    Shirahige, K.5    Labib, K.6
  • 24
    • 70350124025 scopus 로고    scopus 로고
    • HARPing on about the DNA damage response during replication
    • Driscoll R., Cimprich KA. 2009. HARPing on about the DNA damage response during replication. Genes Dev 23: 2359-2365.
    • (2009) Genes Dev , vol.23 , pp. 2359-2365
    • Driscoll, R.1    Cimprich, K.A.2
  • 25
    • 42249099979 scopus 로고    scopus 로고
    • Budding yeast Mms22 and Mms1 regulate homologous recombination induced by replisome blockage
    • Duro E., Vaisica JA, Brown GW, Rouse J. 2008. Budding yeast Mms22 and Mms1 regulate homologous recombination induced by replisome blockage. DNA Repair (Amst) 7: 811-818.
    • (2008) DNA Repair (Amst) , vol.7 , pp. 811-818
    • Duro, E.1    Vaisica, J.A.2    Brown, G.W.3    Rouse, J.4
  • 26
    • 43449133259 scopus 로고    scopus 로고
    • PCNA ubiquitination and REV1 define temporally distinct mechanisms for controlling translesion synthesis in the avian cell line DT40
    • Edmunds C.E., Simpson LJ, Sale JE. 2008. PCNA ubiquitination and REV1 define temporally distinct mechanisms for controlling translesion synthesis in the avian cell line DT40. Mol Cell 30: 519-529.
    • (2008) Mol Cell , vol.30 , pp. 519-529
    • Edmunds, C.E.1    Simpson, L.J.2    Sale, J.E.3
  • 31
    • 39449123590 scopus 로고    scopus 로고
    • Cleavage of stalled forks by fission yeast Mus81/Eme1 in absence of DNA replication checkpoint
    • Froget B., Blaisonneau J, Lambert S, Baldacci G. 2008. Cleavage of stalled forks by fission yeast Mus81/Eme1 in absence of DNA replication checkpoint. Mol Biol Cell 19: 445-456.
    • (2008) Mol Biol Cell , vol.19 , pp. 445-456
    • Froget, B.1    Blaisonneau, J.2    Lambert, S.3    Baldacci, G.4
  • 33
    • 76749101865 scopus 로고    scopus 로고
    • Recruitment to stalled replication forks of the PriA DNA helicase and replisomeloading activities is essential for survival
    • Gabbai C.B., Marians KJ. 2010. Recruitment to stalled replication forks of the PriA DNA helicase and replisomeloading activities is essential for survival. DNA Repair (Amst) 9: 202-209.
    • (2010) DNA Repair (Amst) , vol.9 , pp. 202-209
    • Gabbai, C.B.1    Marians, K.J.2
  • 35
    • 38349050087 scopus 로고    scopus 로고
    • The Fanconi anemia protein FANCMcan promote branch migration of Holliday junctions and replication forks
    • Gari K., Decaillet C, Stasiak AZ, Stasiak A, Constantinou A. 2008. The Fanconi anemia protein FANCMcan promote branch migration of Holliday junctions and replication forks. Mol Cell 29: 141-148.
    • (2008) Mol Cell , vol.29 , pp. 141-148
    • Gari, K.1    Decaillet, C.2    Stasiak, A.Z.3    Stasiak, A.4    Constantinou, A.5
  • 36
    • 37249025795 scopus 로고    scopus 로고
    • Dormant origins licensed by excess Mcm2-7 are required for human cells to survive replicative stress
    • Ge X.Q., Jackson DA, Blow JJ. 2007. Dormant origins licensed by excess Mcm2-7 are required for human cells to survive replicative stress. Genes Dev 21: 3331-3341.
    • (2007) Genes Dev , vol.21 , pp. 3331-3341
    • Ge, X.Q.1    Jackson, D.A.2    Blow, J.J.3
  • 38
    • 33846796258 scopus 로고    scopus 로고
    • Rtt109 acetylates histone H3 lysine 56 and functions in DNA replication
    • Han J., Zhou H, Horazdovsky B, Zhang K, Xu RM, Zhang Z. 2007. Rtt109 acetylates histone H3 lysine 56 and functions in DNA replication. Science 315: 653-655.
    • (2007) Science , vol.315 , pp. 653-655
    • Han, J.1    Zhou, H.2    Horazdovsky, B.3    Zhang, K.4    Xu, R.M.5    Zhang, Z.6
  • 40
    • 78549251695 scopus 로고    scopus 로고
    • Rad51 protects nascent DNA from Mre11-dependent degradation and promotes continuous DNA synthesis
    • Hashimoto Y., Chaudhuri AR, Lopes M, Costanzo V. 2010. Rad51 protects nascent DNA from Mre11-dependent degradation and promotes continuous DNA synthesis. Nat Struct Mol Biol 17: 1305-1311.
    • (2010) Nat Struct Mol Biol , vol.17 , pp. 1305-1311
    • Hashimoto, Y.1    Chaudhuri, A.R.2    Lopes, M.3    Costanzo, V.4
  • 41
    • 84855427966 scopus 로고    scopus 로고
    • RAD51-and MRE11-dependent reassembly of uncoupled CMG helicase complex at collapsed replication forks
    • Hashimoto Y., Puddu F, Costanzo V. 2012. RAD51-and MRE11-dependent reassembly of uncoupled CMG helicase complex at collapsed replication forks. Nat Struct Mol Biol 19: 17-24.
    • (2012) Nat Struct Mol Biol , vol.19 , pp. 17-24
    • Hashimoto, Y.1    Puddu, F.2    Costanzo, V.3
  • 42
    • 59249105978 scopus 로고    scopus 로고
    • A microhomology-mediated break-induced replication model for the origin of human copy number variation
    • Hastings P.J., Ira G, Lupski JR. 2009. A microhomology-mediated break-induced replication model for the origin of human copy number variation. PLoS Genet 5: e1000327.
    • (2009) PLoS Genet , vol.5
    • Hastings, P.J.1    Ira, G.2    Lupski, J.R.3
  • 43
    • 26644472197 scopus 로고    scopus 로고
    • Unwinding of the nascent lagging strand by Rep and PriA enables the direct restart of stalled replication forks
    • Heller R.C., Marians KJ. 2005a. Unwinding of the nascent lagging strand by Rep and PriA enables the direct restart of stalled replication forks. J Biol Chem 280: 34143-34151.
    • (2005) J Biol Chem , vol.280 , pp. 34143-34151
    • Heller, R.C.1    Marians, K.J.2
  • 44
    • 14644415982 scopus 로고    scopus 로고
    • The disposition of nascent strands at stalled replication forks dictates the pathway of replisome loading during restart
    • Heller R.C., Marians KJ. 2005b. The disposition of nascent strands at stalled replication forks dictates the pathway of replisome loading during restart. Mol Cell 17: 733-743.
    • (2005) Mol Cell , vol.17 , pp. 733-743
    • Heller, R.C.1    Marians, K.J.2
  • 45
    • 31844456472 scopus 로고    scopus 로고
    • Replication fork reactivation downstream of a blocked nascent leading strand
    • Heller R.C., Marians KJ. 2006a. Replication fork reactivation downstream of a blocked nascent leading strand. Nature 439: 557-562.
    • (2006) Nature , vol.439 , pp. 557-562
    • Heller, R.C.1    Marians, K.J.2
  • 46
    • 33845330910 scopus 로고    scopus 로고
    • Replisome assembly and the direct restart of stalled replication forks
    • Heller R.C., Marians KJ. 2006b. Replisome assembly and the direct restart of stalled replication forks. Nat Rev Mol Cell Biol 7: 932-943.
    • (2006) Nat Rev Mol Cell Biol , vol.7 , pp. 932-943
    • Heller, R.C.1    Marians, K.J.2
  • 47
    • 0017298802 scopus 로고
    • A model for replication repair in mammalian cells
    • Higgins N.P., Kato K, Strauss B. 1976. A model for replication repair in mammalian cells. J Mol Biol 101: 417-425.
    • (1976) J Mol Biol , vol.101 , pp. 417-425
    • Higgins, N.P.1    Kato, K.2    Strauss, B.3
  • 48
    • 0038365180 scopus 로고    scopus 로고
    • Fate ofDNA replication fork encountering a single DNA lesion during oriC plasmid DNA replication in vitro
    • Higuchi K., Katayama T, Iwai S, Hidaka M, Horiuchi T, Maki H. 2003. Fate ofDNA replication fork encountering a single DNA lesion during oriC plasmid DNA replication in vitro. Genes Cells 8: 437-449.
    • (2003) Genes Cells , vol.8 , pp. 437-449
    • Higuchi, K.1    Katayama, T.2    Iwai, S.3    Hidaka, M.4    Horiuchi, T.5    Maki, H.6
  • 49
    • 48249084972 scopus 로고    scopus 로고
    • Excess MCM proteins protect human cells from replicative stress by licensing backup origins of replication
    • Ibarra A., Schwob E, Mendez J. 2008. Excess MCM proteins protect human cells from replicative stress by licensing backup origins of replication. Proc Natl Acad Sci 105: 8956-8961.
    • (2008) Proc Natl Acad Sci , vol.105 , pp. 8956-8961
    • Ibarra, A.1    Schwob, E.2    Mendez, J.3
  • 50
    • 0014982055 scopus 로고
    • Usefulness of benzoylated naphthoylated DEAE-cellulose to distinguish and fractionate double-strandedDNA bearing different extents of singlestranded regions
    • Iyer V.N., Rupp WD. 1971. Usefulness of benzoylated naphthoylated DEAE-cellulose to distinguish and fractionate double-strandedDNA bearing different extents of singlestranded regions. Biochem Biophys Acta 228: 117-126.
    • (1971) Biochem Biophys Acta , vol.228 , pp. 117-126
    • Iyer, V.N.1    Rupp, W.D.2
  • 51
    • 17444416489 scopus 로고    scopus 로고
    • Replication checkpoint kinase Cds1 regulates Mus81 to preserve genome integrity during replication stress
    • Kai M., Boddy MN, Russell P, Wang TS. 2005. Replication checkpoint kinase Cds1 regulates Mus81 to preserve genome integrity during replication stress. Genes Dev 19: 919-932.
    • (2005) Genes Dev , vol.19 , pp. 919-932
    • Kai, M.1    Boddy, M.N.2    Russell, P.3    Wang, T.S.4
  • 52
    • 84862786939 scopus 로고    scopus 로고
    • Mcm10 plays an essential role in origin DNA unwinding after loading of the CMG components
    • Kanke M., Kodama Y, Takahashi TS, Nakagawa T, Masukata H. 2012. Mcm10 plays an essential role in origin DNA unwinding after loading of the CMG components. EMBO J 31: 2182-2194.
    • (2012) EMBO J , vol.31 , pp. 2182-2194
    • Kanke, M.1    Kodama, Y.2    Takahashi, T.S.3    Nakagawa, T.4    Masukata, H.5
  • 53
    • 2442417331 scopus 로고    scopus 로고
    • Interaction of human DNA polymerase h with monoubiquitinated PCNA: A possible mechanism for the polymerase switch in response to DNA damage
    • Kannouche P.L., Wing J, Lehmann AR. 2004. Interaction of human DNA polymerase h with monoubiquitinated PCNA: A possible mechanism for the polymerase switch in response to DNA damage. Mol Cell 14: 491-500.
    • (2004) Mol Cell , vol.14 , pp. 491-500
    • Kannouche, P.L.1    Wing, J.2    Lehmann, A.R.3
  • 54
    • 77951699996 scopus 로고    scopus 로고
    • The RAD6 DNA damage tolerance pathway operates uncoupled from the replication fork and is functional beyond S phase
    • Karras G.I., Jentsch S. 2010. The RAD6 DNA damage tolerance pathway operates uncoupled from the replication fork and is functional beyond S phase. Cell 141: 255-267.
    • (2010) Cell , vol.141 , pp. 255-267
    • Karras, G.I.1    Jentsch, S.2
  • 56
    • 0021992965 scopus 로고
    • Mechanism of transient inhibition of DNA synthesis in ultraviolet-irradiated E. coli: Inhibition is independent of recA whilst recovery requires RecA protein itself and an additional, inducible SOS function
    • Khidhir M.A., Casaregola S, Holland IB. 1985. Mechanism of transient inhibition of DNA synthesis in ultraviolet-irradiated E. coli: Inhibition is independent of recA whilst recovery requires RecA protein itself and an additional, inducible SOS function. Mol Gen Genet 199: 133-140.
    • (1985) Mol Gen Genet , vol.199 , pp. 133-140
    • Khidhir, M.A.1    Casaregola, S.2    Holland, I.B.3
  • 57
    • 84863615796 scopus 로고    scopus 로고
    • A conserved motif in the C-terminal tail of DNA polymerase a tethers primase to the eukaryotic replisome
    • Kilkenny M.L., De Piccoli G, Perera RL, Labib K, Pellegrini L. 2012. A conserved motif in the C-terminal tail of DNA polymerase a tethers primase to the eukaryotic replisome. J Biol Chem 287: 23740-23747.
    • (2012) J Biol Chem , vol.287 , pp. 23740-23747
    • Kilkenny, M.L.1    de Piccoli, G.2    Perera, R.L.3    Labib, K.4    Pellegrini, L.5
  • 58
    • 2342419732 scopus 로고    scopus 로고
    • DNA replication fidelity
    • Kunkel TA. 2004. DNA replication fidelity. J Biol Chem 279: 16895-16898.
    • (2004) J Biol Chem , vol.279 , pp. 16895-16898
    • Kunkel, T.A.1
  • 59
    • 34249944668 scopus 로고    scopus 로고
    • Arrested replication fork processing: Interplay between checkpoints and recombination
    • Lambert S., Froget B, Carr AM. 2007. Arrested replication fork processing: Interplay between checkpoints and recombination. DNA Repair (Amst) 6: 1042-1061.
    • (2007) DNA Repair (Amst) , vol.6 , pp. 1042-1061
    • Lambert, S.1    Froget, B.2    Carr, A.M.3
  • 61
    • 33750935287 scopus 로고    scopus 로고
    • Gaps and forks in DNA replication: Rediscovering old models
    • Lehmann A.R., Fuchs RP. 2006. Gaps and forks in DNA replication: Rediscovering old models. DNA Repair (Amst) 5: 1495-1498.
    • (2006) DNA Repair (Amst) , vol.5 , pp. 1495-1498
    • Lehmann, A.R.1    Fuchs, R.P.2
  • 62
    • 84856072129 scopus 로고    scopus 로고
    • Polymerase exchange during Okazaki fragment synthesis observed in living cells
    • Lia G., Michel B, Allemand JF. 2012. Polymerase exchange during Okazaki fragment synthesis observed in living cells. Science 335: 328-331.
    • (2012) Science , vol.335 , pp. 328-331
    • Lia, G.1    Michel, B.2    Allemand, J.F.3
  • 63
    • 0027278557 scopus 로고
    • Instability and decay of the primary structure of DNA
    • Lindahl T. 1993. Instability and decay of the primary structure of DNA. Nature 362: 709-715.
    • (1993) Nature , vol.362 , pp. 709-715
    • Lindahl, T.1
  • 64
    • 29544437558 scopus 로고    scopus 로고
    • Multiple mechanisms control chromosome integrity after replication fork uncoupling and restart at irreparable UV lesions
    • Lopes M., Foiani M, Sogo JM. 2006. Multiple mechanisms control chromosome integrity after replication fork uncoupling and restart at irreparable UV lesions. Mol Cell 21: 15-27.
    • (2006) Mol Cell , vol.21 , pp. 15-27
    • Lopes, M.1    Foiani, M.2    Sogo, J.M.3
  • 65
    • 33646073448 scopus 로고    scopus 로고
    • The cullin Rtt101p promotes replication fork progression through damaged DNA and natural pause sites
    • Luke B., Versini G, Jaquenoud M, Zaidi IW, Kurz T, Pintard L., Pasero P, Peter M. 2006. The cullin Rtt101p promotes replication fork progression through damaged DNA and natural pause sites. Curr Biol 16: 786-792.
    • (2006) Curr Biol , vol.16 , pp. 786-792
    • Luke, B.1    Versini, G.2    Jaquenoud, M.3    Zaidi, I.W.4    Kurz, T.5    Pintard, L.6    Pasero, P.7    Peter, M.8
  • 66
    • 0035997347 scopus 로고    scopus 로고
    • The bacterial RecA protein and the recombinational DNA repair of stalled replication forks
    • Lusetti S.L., Cox MM. 2002. The bacterial RecA protein and the recombinational DNA repair of stalled replication forks. Annu Rev Biochem 71: 71-100.
    • (2002) Annu Rev Biochem , vol.71 , pp. 71-100
    • Lusetti, S.L.1    Cox, M.M.2
  • 67
    • 77953076932 scopus 로고    scopus 로고
    • Break-induced replication requires all essentialDNA replication factors except those specific for pre-RC assembly
    • Lydeard J.R., Lipkin-Moore Z, Sheu Y-J, Stillman B, Burgers P.M., Haber JE. 2010. Break-induced replication requires all essentialDNA replication factors except those specific for pre-RC assembly. Genes Dev 24: 1133-1144.
    • (2010) Genes Dev , vol.24 , pp. 1133-1144
    • Lydeard, J.R.1    Lipkin-Moore, Z.2    Sheu, Y.-J.3    Stillman, B.4    Burgers, P.M.5    Haber, J.E.6
  • 68
    • 84877122234 scopus 로고    scopus 로고
    • Archaeology of eukaryotic DNA replication
    • doi: 10.1101/cshperspect.a012963
    • Makarova K.S., Koonin EV. 2013. Archaeology of eukaryotic DNA replication. Cold Spring Harb Perspect Biol doi: 10.1101/cshperspect.a012963.
    • (2013) Cold Spring Harb Perspect Biol
    • Makarova, K.S.1    Koonin, E.V.2
  • 69
    • 22444448143 scopus 로고    scopus 로고
    • A role for cell-cycle-regulated histone H3 lysine 56 acetylation in the DNA damage response
    • Masumoto H., Hawke D, Kobayashi R, Verreault A. 2005. A role for cell-cycle-regulated histone H3 lysine 56 acetylation in the DNA damage response. Nature 436: 294-298.
    • (2005) Nature , vol.436 , pp. 294-298
    • Masumoto, H.1    Hawke, D.2    Kobayashi, R.3    Verreault, A.4
  • 70
    • 0034737294 scopus 로고    scopus 로고
    • Modulation of RNA polymerase by (p)ppGpp reveals a RecG-dependent mechanism for replication fork progression
    • McGlynn P, Lloyd RG. 2000. Modulation of RNA polymerase by (p)ppGpp reveals a RecG-dependent mechanism for replication fork progression. Cell 101: 35-45.
    • (2000) Cell , vol.101 , pp. 35-45
    • McGlynn, P.1    Lloyd, R.G.2
  • 71
    • 0036844340 scopus 로고    scopus 로고
    • Recombinational repair and restart of damaged replication forks
    • McGlynn P, Lloyd RG. 2002. Recombinational repair and restart of damaged replication forks. Nat Rev Mol Cell Biol 3: 859-870.
    • (2002) Nat Rev Mol Cell Biol , vol.3 , pp. 859-870
    • McGlynn, P.1    Lloyd, R.G.2
  • 72
    • 0035902573 scopus 로고    scopus 로고
    • Formation of Holliday junctions by regression of nascent DNA in intermediates containing stalled replication forks: RecG stimulates regression even when the DNA is negatively supercoiled
    • McGlynn P, Lloyd RG, Marians KJ. 2001. Formation of Holliday junctions by regression of nascent DNA in intermediates containing stalled replication forks: RecG stimulates regression even when the DNA is negatively supercoiled. Proc Natl Acad Sci 98: 8235-8240.
    • (2001) Proc Natl Acad Sci , vol.98 , pp. 8235-8240
    • McGlynn, P.1    Lloyd, R.G.2    Marians, K.J.3
  • 73
    • 2442686846 scopus 로고    scopus 로고
    • Functional uncoupling of twin polymerases: Mechanism of polymerase dissociation from a lagging-strand block
    • McInerney P, O'Donnell M. 2004. Functional uncoupling of twin polymerases: Mechanism of polymerase dissociation from a lagging-strand block. J Biol Chem 279: 21543-21551.
    • (2004) J Biol Chem , vol.279 , pp. 21543-21551
    • McInerney, P.1    O'Donnell, M.2
  • 74
    • 34547730912 scopus 로고    scopus 로고
    • Characterization of a triple DNA polymerase replisome
    • McInerney P, Johnson A, Katz F, O'Donnell M. 2007. Characterization of a triple DNA polymerase replisome. Mol Cell 27: 527-538.
    • (2007) Mol Cell , vol.27 , pp. 527-538
    • McInerney, P.1    Johnson, A.2    Katz, F.3    O'Donnell, M.4
  • 75
    • 0023707742 scopus 로고
    • Replication of simian virus 40 DNA after UV irradiation: Evidence of growing fork blockage and single-stranded gaps in daughter strands
    • Mezzina M., Menck CF, Courtin P, Sarasin A. 1988. Replication of simian virus 40 DNA after UV irradiation: Evidence of growing fork blockage and single-stranded gaps in daughter strands. J Virol 62: 4249-4258.
    • (1988) J Virol , vol.62 , pp. 4249-4258
    • Mezzina, M.1    Menck, C.F.2    Courtin, P.3    Sarasin, A.4
  • 76
    • 77953085206 scopus 로고    scopus 로고
    • Multiple Rad5 activities mediate sister chromatid recombination to bypass DNA damage at stalled replication forks
    • Minca E.C., Kowalski D. 2010. Multiple Rad5 activities mediate sister chromatid recombination to bypass DNA damage at stalled replication forks. Mol Cell 38: 649-661.
    • (2010) Mol Cell , vol.38 , pp. 649-661
    • Minca, E.C.1    Kowalski, D.2
  • 77
    • 72849150228 scopus 로고    scopus 로고
    • Nearby inverted repeats fuse to generate acentric and dicentric palindromic chromosomes by a replication template exchange mechanism
    • Mizuno K., Lambert S, Baldacci G, Murray JM, Carr AM. 2009. Nearby inverted repeats fuse to generate acentric and dicentric palindromic chromosomes by a replication template exchange mechanism. Genes Dev 23: 2876-2886.
    • (2009) Genes Dev , vol.23 , pp. 2876-2886
    • Mizuno, K.1    Lambert, S.2    Baldacci, G.3    Murray, J.M.4    Carr, A.M.5
  • 78
    • 34249066085 scopus 로고    scopus 로고
    • PCNA, the maestro of the replication fork
    • Moldovan G-L, Pfander B, Jentsch S. 2007. PCNA, the maestro of the replication fork. Cell 129: 665-679.
    • (2007) Cell , vol.129 , pp. 665-679
    • Moldovan, G.-L.1    Pfander, B.2    Jentsch, S.3
  • 79
    • 77649264634 scopus 로고    scopus 로고
    • A postincision-deficient TFIIH causes replication fork breakage and uncovers alternative Rad51-or Pol32-mediated restart mechanisms
    • Moriel-Carretero M, Aguilera A. 2010. A postincision-deficient TFIIH causes replication fork breakage and uncovers alternative Rad51-or Pol32-mediated restart mechanisms. Mol Cell 37: 690-701.
    • (2010) Mol Cell , vol.37 , pp. 690-701
    • Moriel-Carretero, M.1    Aguilera, A.2
  • 81
    • 77955559161 scopus 로고    scopus 로고
    • Response of the bacteriophage T4 replisome to noncoding lesions and regression of a stalled replication fork
    • Nelson S.W., Benkovic SJ. 2010. Response of the bacteriophage T4 replisome to noncoding lesions and regression of a stalled replication fork. J Mol Biol 401: 743-756.
    • (2010) J Mol Biol , vol.401 , pp. 743-756
    • Nelson, S.W.1    Benkovic, S.J.2
  • 82
    • 77955476243 scopus 로고    scopus 로고
    • DNA damage signaling recruits the Rtt107-Slx4 scaffolds via Dpb11 to mediate replication stress response
    • Ohouo P.Y., Bastos de Oliveira FM, Almeida BS, Smolka MB. 2010. DNA damage signaling recruits the Rtt107-Slx4 scaffolds via Dpb11 to mediate replication stress response. Mol Cell 39: 300-306.
    • (2010) Mol Cell , vol.39 , pp. 300-306
    • Ohouo, P.Y.1    Bastos de Oliveira, F.M.2    Almeida, B.S.3    Smolka, M.B.4
  • 83
    • 0037799191 scopus 로고    scopus 로고
    • Uncoupling of leading-and lagging-strand DNA replication during lesion bypass in vivo
    • Pages V., Fuchs RP. 2003. Uncoupling of leading-and lagging-strand DNA replication during lesion bypass in vivo. Science 300: 1300-1303.
    • (2003) Science , vol.300 , pp. 1300-1303
    • Pages, V.1    Fuchs, R.P.2
  • 84
    • 41649111513 scopus 로고    scopus 로고
    • The Ino80 chromatin-remodeling enzyme regulates replisome function and stability
    • Papamichos-Chronakis M, Peterson CL. 2008. The Ino80 chromatin-remodeling enzyme regulates replisome function and stability. Nat Struct Mol Biol 15: 338-345.
    • (2008) Nat Struct Mol Biol , vol.15 , pp. 338-345
    • Papamichos-Chronakis, M.1    Peterson, C.L.2
  • 85
    • 77957123627 scopus 로고    scopus 로고
    • Pathways of mammalian replication fork restart
    • Petermann E., Helleday T. 2010. Pathways of mammalian replication fork restart. Nat Rev Mol Cell Biol 11: 683-687.
    • (2010) Nat Rev Mol Cell Biol , vol.11 , pp. 683-687
    • Petermann, E.1    Helleday, T.2
  • 86
    • 76849109722 scopus 로고    scopus 로고
    • Hydroxyurea-stalled replication forks become progressively inactivated and require two different RAD51-mediated pathways for restart and repair
    • Petermann E., Orta ML, Issaeva N, Schultz N, Helleday T. 2010. Hydroxyurea-stalled replication forks become progressively inactivated and require two different RAD51-mediated pathways for restart and repair. Mol Cell 37: 492-502.
    • (2010) Mol Cell , vol.37 , pp. 492-502
    • Petermann, E.1    Orta, M.L.2    Issaeva, N.3    Schultz, N.4    Helleday, T.5
  • 87
    • 79957884091 scopus 로고    scopus 로고
    • Rescuing stalled replication forks: MMS22L-TONSL, a novel complex for DNA replication fork repair in human cells
    • Piwko W., Buser R, Peter M. 2011. Rescuing stalled replication forks: MMS22L-TONSL, a novel complex for DNA replication fork repair in human cells. Cell Cycle 10: 1703-1705.
    • (2011) Cell Cycle , vol.10 , pp. 1703-1705
    • Piwko, W.1    Buser, R.2    Peter, M.3
  • 90
    • 77951537332 scopus 로고    scopus 로고
    • Stoichiometry and architecture of active DNA replication machinery in Escherichia coli
    • Reyes-Lamothe R, Sherratt DJ, Leake MC. 2010. Stoichiometry and architecture of active DNA replication machinery in Escherichia coli. Science 328: 498-501.
    • (2010) Science , vol.328 , pp. 498-501
    • Reyes-Lamothe, R.1    Sherratt, D.J.2    Leake, M.C.3
  • 91
    • 6344284782 scopus 로고    scopus 로고
    • Mcm10 regulates the stability and chromatin association of DNA polymerase-a
    • Ricke R.M., Bielinsky AK. 2004. Mcm10 regulates the stability and chromatin association of DNA polymerase-a. Mol Cell 16: 173-185.
    • (2004) Mol Cell , vol.16 , pp. 173-185
    • Ricke, R.M.1    Bielinsky, A.K.2
  • 92
    • 38749104624 scopus 로고    scopus 로고
    • Regulation of Rtt107 recruitment to stalled DNA replication forks by the cullin Rtt101 and the Rtt109 acetyltransferase
    • Roberts T.M., Zaidi IW, Vaisica JA, Peter M, Brown GW. 2008. Regulation of Rtt107 recruitment to stalled DNA replication forks by the cullin Rtt101 and the Rtt109 acetyltransferase. Mol Biol Cell 19: 171-180.
    • (2008) Mol Biol Cell , vol.19 , pp. 171-180
    • Roberts, T.M.1    Zaidi, I.W.2    Vaisica, J.A.3    Peter, M.4    Brown, G.W.5
  • 93
    • 0035902453 scopus 로고    scopus 로고
    • RecA protein promotes the regression of stalled replication forks in vitro
    • Robu M.E., Inman RB, Cox MM. 2001. RecA protein promotes the regression of stalled replication forks in vitro. Proc Natl Acad Sci 98: 8211-8218.
    • (2001) Proc Natl Acad Sci , vol.98 , pp. 8211-8218
    • Robu, M.E.1    Inman, R.B.2    Cox, M.M.3
  • 94
    • 33947327048 scopus 로고    scopus 로고
    • Replication fork stalling and cell cycle arrest in UV-irradiated Escherichia coli
    • Rudolph C.J., Upton AL, Lloyd RG. 2007. Replication fork stalling and cell cycle arrest in UV-irradiated Escherichia coli. Genes Dev 21: 668-681.
    • (2007) Genes Dev , vol.21 , pp. 668-681
    • Rudolph, C.J.1    Upton, A.L.2    Lloyd, R.G.3
  • 96
    • 0014432520 scopus 로고
    • Discontinuities in the DNA synthesized in an excision-defective strain of Escherichia coli following ultraviolet irradiation
    • Rupp W.D., Howard-Flanders P. 1968. Discontinuities in the DNA synthesized in an excision-defective strain of Escherichia coli following ultraviolet irradiation. J Mol Biol 31: 291-304.
    • (1968) J Mol Biol , vol.31 , pp. 291-304
    • Rupp, W.D.1    Howard-Flanders, P.2
  • 97
    • 79955799175 scopus 로고    scopus 로고
    • Double-strand break repair-independent role for BRCA2 in blocking stalled replication fork degradation by MRE11
    • Schlacher K., Christ N, Siaud N, Egashira A, Wu H, Jasin M. 2011. Double-strand break repair-independent role for BRCA2 in blocking stalled replication fork degradation by MRE11. Cell 145: 529-542.
    • (2011) Cell , vol.145 , pp. 529-542
    • Schlacher, K.1    Christ, N.2    Siaud, N.3    Egashira, A.4    Wu, H.5    Jasin, M.6
  • 98
    • 46249122812 scopus 로고    scopus 로고
    • Separate roles for the DNA damage checkpoint protein kinases in stabilizing DNA replication forks
    • Segurado M., Diffley JFX. 2008. Separate roles for the DNA damage checkpoint protein kinases in stabilizing DNA replication forks. Genes Dev 22: 1816-1827.
    • (2008) Genes Dev , vol.22 , pp. 1816-1827
    • Segurado, M.1    Diffley, J.F.X.2
  • 99
    • 42049094866 scopus 로고    scopus 로고
    • Ino80 chromatin remodeling complex promotes recovery of stalled replication forks
    • Shimada K., Oma Y, Schleker T, Kugou K, Ohta K, Harata M, Gasser SM. 2008. Ino80 chromatin remodeling complex promotes recovery of stalled replication forks. Curr Biol 18: 566-575.
    • (2008) Curr Biol , vol.18 , pp. 566-575
    • Shimada, K.1    Oma, Y.2    Schleker, T.3    Kugou, K.4    Ohta, K.5    Harata, M.6    Gasser, S.M.7
  • 101
    • 0037178740 scopus 로고    scopus 로고
    • Fork reversal and ssDNA accumulation at stalled replication forks owing to checkpoint defects
    • Sogo J.M., Lopes M, Foiani M. 2002. Fork reversal and ssDNA accumulation at stalled replication forks owing to checkpoint defects. Science 297: 599-602.
    • (2002) Science , vol.297 , pp. 599-602
    • Sogo, J.M.1    Lopes, M.2    Foiani, M.3
  • 102
    • 53149087431 scopus 로고    scopus 로고
    • The FANCMortholog Fml1 promotes recombination at stalled replication forks and limits crossing over during DNA double-strand break repair
    • Sun W., Nandi S, Osman F, Ahn JS, Jakovleska J, Lorenz A, Whitby MC. 2008. The FANCMortholog Fml1 promotes recombination at stalled replication forks and limits crossing over during DNA double-strand break repair. Mol Cell 32: 118-128.
    • (2008) Mol Cell , vol.32 , pp. 118-128
    • Sun, W.1    Nandi, S.2    Osman, F.3    Ahn, J.S.4    Jakovleska, J.5    Lorenz, A.6    Whitby, M.C.7
  • 105
    • 67349167663 scopus 로고    scopus 로고
    • The MRX complex stabilizes the replisome independently of the S phase checkpoint during replication stress
    • Tittel-Elmer M, Alabert C, Pasero P, Cobb JA. 2009. The MRX complex stabilizes the replisome independently of the S phase checkpoint during replication stress. EMBO J 28: 1142-1156.
    • (2009) EMBO J , vol.28 , pp. 1142-1156
    • Tittel-Elmer, M.1    Alabert, C.2    Pasero, P.3    Cobb, J.A.4
  • 106
    • 24044552287 scopus 로고    scopus 로고
    • Mrc1 and Tof1 promote replication fork progression and recovery independently of Rad53
    • Tourrière H, Versini G, Cordón-Preciado V, Alabert C, Pasero P. 2005. Mrc1 and Tof1 promote replication fork progression and recovery independently of Rad53. Mol Cell 19: 699-706.
    • (2005) Mol Cell , vol.19 , pp. 699-706
    • Tourrière, H.1    Versini, G.2    Cordón-Preciado, V.3    Alabert, C.4    Pasero, P.5
  • 107
    • 80052702417 scopus 로고    scopus 로고
    • Timing and spacing of ubiquitin-dependent DNA damage bypass
    • Ulrich HD. 2011. Timing and spacing of ubiquitin-dependent DNA damage bypass. FEBS Lett 585: 2861-2867.
    • (2011) FEBS Lett , vol.585 , pp. 2861-2867
    • Ulrich, H.D.1
  • 108
    • 77951193923 scopus 로고    scopus 로고
    • Continued primer synthesis at stalled replication forks contributes to checkpoint activation
    • Van C., Yan S, Michael WM, Waga S, Cimprich KA. 2010. Continued primer synthesis at stalled replication forks contributes to checkpoint activation. J Cell Biol 189: 233-246.
    • (2010) J Cell Biol , vol.189 , pp. 233-246
    • Van, C.1    Yan, S.2    Michael, W.M.3    Waga, S.4    Cimprich, K.A.5
  • 109
    • 84860527731 scopus 로고    scopus 로고
    • Mcm10 associates with the loaded DNA helicase at replication origins and defines a novel step in its activation
    • van Deursen F, Sengupta S, De Piccoli G, Sanchez-Diaz A, Labib K. 2012. Mcm10 associates with the loaded DNA helicase at replication origins and defines a novel step in its activation. EMBO J 31: 2195-2206.
    • (2012) EMBO J , vol.31 , pp. 2195-2206
    • van Deursen, F.1    Sengupta, S.2    de Piccoli, G.3    Sanchez-Diaz, A.4    Labib, K.5
  • 110
    • 84857370681 scopus 로고    scopus 로고
    • Mcm10 plays a role in functioning of the eukaryotic replicative DNA helicase, Cdc45-Mcm-GINS
    • Watase G., Takisawa H, Kanemaki MT. 2012. Mcm10 plays a role in functioning of the eukaryotic replicative DNA helicase, Cdc45-Mcm-GINS. Curr Biol 22: 343-349.
    • (2012) Curr Biol , vol.22 , pp. 343-349
    • Watase, G.1    Takisawa, H.2    Kanemaki, M.T.3
  • 113
    • 0037352498 scopus 로고    scopus 로고
    • PriA mediates DNA replication pathway choice at recombination intermediates
    • Xu L., Marians KJ. 2003. PriA mediates DNA replication pathway choice at recombination intermediates. Mol Cell 11: 817-826.
    • (2003) Mol Cell , vol.11 , pp. 817-826
    • Xu, L.1    Marians, K.J.2
  • 114
    • 64049105391 scopus 로고    scopus 로고
    • TopBP1 and DNA polymerase-a directly recruit the 9-1-1 complex to stalled DNA replication forks
    • Yan S., Michael WM. 2009. TopBP1 and DNA polymerase-a directly recruit the 9-1-1 complex to stalled DNA replication forks. J Cell Biol 184: 793-804.
    • (2009) J Cell Biol , vol.184 , pp. 793-804
    • Yan, S.1    Michael, W.M.2
  • 115
    • 76749090482 scopus 로고    scopus 로고
    • The processing of doublestranded DNA breaks for recombinational repair by helicase-nuclease complexes
    • Yeeles J.T., Dillingham MS. 2010. The processing of doublestranded DNA breaks for recombinational repair by helicase-nuclease complexes. DNA Repair (Amst) 9: 276-285.
    • (2010) DNA Repair (Amst) , vol.9 , pp. 276-285
    • Yeeles, J.T.1    Dillingham, M.S.2
  • 116
    • 80054091679 scopus 로고    scopus 로고
    • The Escherichia coli replisome is inherently DNA damage tolerant
    • Yeeles J.T., Marians KJ. 2011. The Escherichia coli replisome is inherently DNA damage tolerant. Science 334: 235-238.
    • (2011) Science , vol.334 , pp. 235-238
    • Yeeles, J.T.1    Marians, K.J.2


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