DNA Replication Fidelity

Journal of Biological Chemistry

Volumn 279, Issue 17, 2004, Pages 16895-16898

  Kunkel, Thomas A ^a  

^a NATIONAL INSTITUTE OF ENVIRONMENTAL HEALTH SCIENCES   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

CONFORMATIONAL TRANSITION; DNA DAMAGE; DNA REPLICATION; DNA SYNTHESIS; GENE DELETION; GENE INSERTION; HUMAN; HYDROGEN BOND; MISMATCH REPAIR; NONHUMAN; PRIORITY JOURNAL; SHORT SURVEY;

BASE COMPOSITION; BASE PAIR MISMATCH; BASE PAIRING; DNA; DNA REPLICATION; ENTROPY; ESCHERICHIA COLI; GENE DELETION; HYDROGEN BONDING; MODELS, MOLECULAR; NUCLEIC ACID CONFORMATION; THERMODYNAMICS;

INSERTION SEQUENCES;

EID: 2342419732     PISSN: 00219258     EISSN: None     Source Type: Journal    
DOI: 10.1074/jbc.R400006200     Document Type: Short Survey

References (60)

1. Watson, J. D., and Crick, F. H. C. (1953) Nature 171, 737-738
2. Hübscher, U., Maga, G., and Spadari, S. (2002) Annu. Rev. Biochem. 71, 133-163
3. Shcherbakova, P. V., Bebenek, K., and Kunkel, T. A. (2003) Sci. Aging Knowl. Environ. sageke.sciencemag.org/cgi/content/full/sageke;2003/8/ref31
4. Schaaper, R. M. (1993) J. Biol. Chem. 288, 23762-23765
5. Loeb, L. A. (2003) Cancer Res. 51, 3075-3079
6. Friedberg, E. C., Walker, G. C., and Siede, W. (1995) DNA Repair and Mutagenesis, American Society for Microbiology, Washington, D. C.
7. Goodman, M. F. (2002) Annu. Rev. Biochem. 71, 17-50
8. Kunkel, T. A., Pavlov, Y. I., and Benenek, K. (2003) DNA Repair 2, 135-149
9. Friedberg, E. C., Wagner, R., and Radman, M. (2002) Science 296, 1627-1630
10. Prakash, S., and Prakash, L. (2002) Genes Dev. 16, 1872-1883
11. Livneh, Z. (2001) J. Biol. Chem. 276, 25639-25642
12. Tissier, A., McDonald, J. P., Frank, E. G., and Woodgate, R. (2000) Genes Dev. 14, 1642-1650
13. Zhang, Y., Yuan, F., Wu, X., and Wang, Z. (2000) Mol. Cell. Biol. 20, 7099-7108
14. Johnson, R. E., Washington, M. T., Haracska, L., Prakash, S., and Prakash, L. (2000) Nature 406, 1015-1019
15. Kunkel, T. A., and Bebenek, K. (2000) Annu. Rev. Biochem. 69, 497-529
16. Beard, W. A., and Wilson, S. H. (1998) Chem. Biol. 5, R7-R13
17. Steitz, T. A. (1999) J. Biol. Chem. 274, 17395-17398
18. Doublié, S., Sawaya, M. R., and Ellenberger, T. (1999) Structure 7, R31-R35
19. Beard, W. A., and Wilson, S. H. (2003) Structure 11, 489-496
20. Friedberg, E. C., Fischhaber, P. L., and Kisker, C. (2001) Cell 107, 9-12
21. Beard, W. A., and Wilson, S. H. (2001) Structure 9, 759-764
22. Garcia-Diaz, M., Bebenek, K., Krahn, J. M., Blanco, L., Kunkel, T. A., and Pedersen, L. (2004) Mol. Cell, 13, 561-572
23. Steitz, T. A., Smerdon, S. J., Jager, J., and Joyce, C. M. (1994) Science 266, 2022-2025
24. Kool, E. T. (2002) Annu. Rev. Biochem. 71, 191-219
25. Loeb, L. A., and Kunkel, T. A. (1982) Annu. Rev. Biochem. 51, 429-457
26. Boudsocq, F., Ling, H., Yang, W., and Woodgate, R. (2002) DNA Repair 1, 343-358
27. Ling, H., Boudsocq, F., Woodgate, R., and Yang, W. (2001) Cell 107, 91-102
28. Ling, H., Boudsocq, F., Plosky, B. S., Woodgate, R., and Yang, W. (2003) Nature 424, 1083-1087
29. Washington, M. T., Helquist, S. A., Kool, E. T., Prakash, L., and Prakash, S. (2003) Mol. Cell. Biol. 23, 5107-5112
30. Petruska, J., Goodman, M. F., Boosalis, M. S., Sowers, L. C., Cheong, C., and Tinoco, I., Jr. (1988) Proc. Natl. Acad. Sci. U. S. A. 85, 6252-6256
31. Echols, H., and Goodman, M. F. (1991) Annu. Rev. Biochem. 60, 477-511
32. Kool, E. T. (1998) Biopolymers 48, 3-17
33. Goodman, M. F., Creighton, S., Bloom, L. B., and Petruska, J. (1993) Crit. Rev. Biochem. Mol. Biol. 28, 83-126
34. Johnson, K. A. (1993) Annu. Rev. Biochem. 62, 685-713
35. Showalter, A. K., and Tsai, M.-D. (2002) Biochemistry 41, 10571-10576
36. Beard, W. A., Shock, D. D., Vande Berg, B. J., and Wilson, S. H. (2002) J. Biol. Chem. 277, 47393-47398
37. Vande Berg, B. J., Beard, W. A., and Wilson, S. H. (2001) J. Biol. Chem. 276, 3408-3416
38. Arndt, J. W., Gong, W., Zhong, X., Showalter, A. K., Liu, J., Dunlap, C. A., Lin, Z., Paxson, C., Tsai, M.-D., and Chan, M. K. (2001) Biochemistry 40, 5368-5375
39. Yang, L., Beard, W. A., Wilson, S. H., Broyde, S., and Schlick, T. (2002) J. Mol. Biol. 317, 679-699
40. Washington, M. T., Prakash, L., and Prakash, S. (2001) Cell 107, 917-927
41. Purohit, V., Grindley, N. D. F., and Joyce, C. M. (2003) Biochemistry 42, 10200-10211
42. Post, C. B., and Ray, W. J., Jr.(1995) Biochemistry 34, 15881-15885
43. Minnick, D. T., Liu, L., Grindley, N. D. F., Kunkel, T. A., and Joyce, C. J. (2002) Proc. Natl. Acad. Sci. U. S. A. 99, 1194-1199
44. Grollman, A. P., and Moriya, M. (1993) Trends Genet. 9, 246-249
45. Fowler, R. G., and Schaaper, R. M. (1997) FEMS Microbiol. Rev. 21, 43-54
46. Krahn, J. M., Beard, W. A., Miller, H., Grollman, A. P., and Wilson, S. H. (2003) Structure 11, 121-127
47. McCulloch, S. D., Kokoska, R. J., Masutani, C., Iwai, S., Hanaoka, F., and Kunkel, T. A. (2004) Nature, 428, 97-100
48. Yang, I.-Y., Miller, H., Wang, Z., Frank, E. G., Ohmori, H., Hanaoka, F., and Moriya, M. (2003) J. Biol. Chem. 278, 13989-13994
49. Perrino, F. W., Blans, P., Harvey, S., Gelhaus, S. L., McGrath, C., Akman, S. A., Jenkins, G. S., LaCourse, W. R., and Fishbein, J. C. (2003) Chem. Res. Toxicol. 16, 1616-1623
50. Chou, K. M., and Cheng, Y. C. (2002) Nature 415, 655-659
51. Perrino, F. W., and Loeb, L. A. (1990) Biochemistry 29, 5226-5231
52. Bebenek, K., Matsuda, T., Masutani, C., Hanaoka, F., and Kunkel, T. A. (2001) J. Biol. Chem. 276, 2317-2320
53. Matsuda, T., Vande Berg, B. J., Bebenek, K., Osheroff, W. P., Wilson, S. H., and Kunkel, T. A. (2003) J. Biol. Chem. 278, 25947-25951
54. Bebenek, A., Carver, G. T., Kloos Dressman, H., Kadyrov, F. A., Haseman, J. K., Petrov, V., Konigsberg, W. H., Karam, J. D., and Drake, J. W. (2002) Genetics 162, 1003-1018
55. Streisinger, G., Okada, Y., Emrich, J., Newton, J., Tsugita, A., Terzaghi, E., and Inouye, M. (1966) Cold Spring Harbor Symp. Quant. Biol. 31, 77-84
56. Kunkel, T. A. (1990) Biochemistry 29, 8003-8011
57. Bebenek, K., and Kunkel, T. A. (2000) Cold Spring Harbor Symp. Quant. Biol. 65, 81-91
58. Bebenek, K., García-Díaz, M., Blanco, L., and Kunkel, T. A. (2003) J. Biol. Chem. 278, 34685-34690
59. Pagès, V., and Fuchs, R. P. (2003) Science 300, 1300-1303
60. Longley, M. J., Nguyen, D., Kunkel, T. A., and Copeland, W. C. (2001) J. Biol. Chem. 276, 38555-38562