Modulation of RNA polymerase by (p)ppGpp reveals a RecG-dependent mechanism for replication fork progression

Cell

Volumn 101, Issue 1, 2000, Pages 35-45

  McGlynn, Peter ^a   Lloyd, Robert G ^a  

^a UNIVERSITY OF NOTTINGHAM   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

HELICASE; RESOLVASE; RNA; RNA POLYMERASE;

ANIMAL CELL; ARTICLE; DNA DAMAGE; ENZYME ACTIVATION; ESCHERICHIA COLI; EXCISION; GENE MUTATION; GENE REPLICATION; GENETIC RECOMBINATION; GENETIC TRANSCRIPTION; HOLLIDAY JUNCTION; MODULATION; NONHUMAN; PRIORITY JOURNAL; RNA REPLICATION; SURVIVAL RATE;

ANIMALIA; ESCHERICHIA COLI;

EID: 0034737294     PISSN: 00928674     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0092-8674(00)80621-2     Document Type: Article

References (48)

1. Modulation of recombination and DNA repair by the RecG and PriA helicases of Escherichia coli K-12
2. The translocating RecBCD enzyme stimulates recombination by directing RecA protein onto ssDNA in a chi-regulated manner
3. Derivations and genotypes of some mutant derivatives of Escherichia coli K-12
4. RNA polymerase mutants that destabilize RNA polymerase-promoter complexes alter NTP-sensing by rrn P1 promoters
5. Clustering of meiotic double-strand breaks on yeast chromosome III
6. Identification of three aspartic acid residues essential for catalysis by the RusA Holliday junction resolvase
7. The stringent response
8. Defending genome integrity during DNA replication: A proposed role for RecQ family helicases
9. Recognition and manipulation of branched DNA by the RusA Holliday junction resolvase of Escherichia coli
10. The mediator for stringent control, ppGpp, binds to the beta-subunit of Escherichia coli RNA polymerase
11. Replication fork bypass of a pyrimidine dimer blocking leading strand DNA synthesis
12. Elimination of replication block protein Fob1 extends the life span of yeast mother cells
13. Cloning, overexpression, purification and characterization of the Escherichia coli RuvC Holliday junction resolvase
14. Mutational analysis of the Escherichia coli spoT gene identifies distinct but overlapping regions involved in ppGpp synthesis and degradation
15. Termination of mammalian rDNA replication: Polar arrest of replication fork movement by transcription termination factor TTF-I
16. Bridging the gap: A family of novel DNA polymerases that replicate faulty DNA
17. Duplex opening by primosome protein PriA for replisome assembly on a recombination intermediate
18. Stable DNA replication: Interplay between DNA replication, homologous recombination, and transcription
19. Biochemistry of homologous recombination in Escherichia coli
20. Transcription through a simple DNA repeat blocks replication elongation
21. Recombinational repair of DNA damage in Escherichia coli and bacteriophage λ
22. spoT, a new genetic locus involved in the stringent response in E. coli
23. The Croonian Lecture, 1996: Endogenous damage to DNA
24. Conjugational recombination in resolvase-deficient ruvC mutants of Escherichia coli K-12 depends on recG
25. Holliday junction resolvases encoded by homologous rusA genes in Escherichia coli K-12 and phage 82
26. Resolution of Holliday intermediates in recombination and DNA repair: Indirect suppression of ruvA, ruvB and ruvC mutations
27. RecG helicase activity at three-and four-strand DNA structures
28. The DNA replication protein PriA and the recombination protein RecG bind D-loops
29. Relationship between transcription and initiation of meiotic recombination: Toward chromatin accessibility
30. Multiple pathways of recombination induced by double-strand breaks in Saccharomyces cerevisiae
31. Recombination between DNA repeats in yeast hpr1δ cells is linked to transcription elongation
32. Role of PriA in replication fork reactivation in Escherichia coli
33. Differential suppression of pr1A2::kan phenotypes in Escherichia coli K-12 by mutations in priA, lexA, and dnaC
34. Interhomolog bias during meiotic recombination: Meiotic functions promote a highly differentiated interhomolog-only pathway
35. RuvAB acts at arrested replication forks
36. Mechanisms of transcription-repair coupling and mutation frequency decline
37. Purification and physical properties of the RuvA and RuvB proteins of Escherichia coli
38. Processing of recombination intermediates by the RuvABC proteins
39. Mechanism of E. coli RecA protein directed strand exchanges in post-replication repair of DNA
40. Residual guanosine 3',5'-bispyrophosphate synthetic activity of relA null mutants can be eliminated by spot null mutations
41. Sequence non-specific double-strand breaks and interhomolog interactions prior to double-strand break formation at a meiotic recombination hot spot in yeast
42. Fine-structure mapping of meiosis-specific double-strand DNA breaks at a recombination hotspot associated with an insertion of telomeric sequences upstream of the HIS4 locus in yeast
43. ATPase-deficient mutants of the Escherichia coli DNA replication protein PriA are capable of catalyzing the assembly of active primosomes
44. Effect of DNA topology on Holliday junction resolution by Escherichia coli RuvC and bacteriophage T7 endonuclease I
45. Coordinated actions of RuvABC in Holliday junction processing
46. Crystal structure of Thermus aquaticus core RNA polymerase at 3.3 A resolution
47. The rpoB mutants destabilizing initiation complexes at stringently controlled promoters behave like 'stringent' RNA polymerases in Escherichia coli
48. Holliday junctions accumulate in replication mutants via a RecA homolog-independent mechanism