Methods of studying telomere damage induced by quadruplex-ligand complexes

Methods

Volumn 57, Issue 1, 2012, Pages 93-99

  Rizzo, Angela ^a   Salvati, Erica ^a   Biroccio, Annamaria ^a  

^a REGINA ELENA NATIONAL CANCER INSTITUTE   (Italy)

Author keywords

G quadruplex ligands; Telomere uncapping; Telomeric G quadruplex structure

Indexed keywords

3,11 DIFLUORO 6,8,13 TRIMETHYL 8H QUINO[4,3,2 KL]ACRIDINIUM METHOSULFATE; ANTINEOPLASTIC AGENT; AS 1411; CAMPTOTHECIN; GUANINE QUADRUPLEX; QUARFLOXIN; TELOMERASE; UNCLASSIFIED DRUG;

ANTIPROLIFERATIVE ACTIVITY; ARTICLE; CELL AGING; CHROMATIN IMMUNOPRECIPITATION; CLINICAL TRIAL (TOPIC); CYTOGENETICS; DNA DAMAGE; DNA REPLICATION; DNA STRUCTURE; DRUG MECHANISM; IMMUNOFLUORESCENCE; KINETICS; NONHUMAN; PRIORITY JOURNAL; PROTEIN DNA BINDING; TELOMERE; TELOMERE SHORTENING;

CELL AGING; DNA; DNA DAMAGE; G-QUADRUPLEXES; HUMANS; LIGANDS; TELOMERASE; TELOMERE;

EID: 84865072128     PISSN: 10462023     EISSN: 10959130     Source Type: Journal    
DOI: 10.1016/j.ymeth.2012.02.010     Document Type: Article

References (68)

1. Wright W.E., Tesmer V.M., Huffman K.E., Levene S.D., Shay J.W. Genes Dev. 1997, 11:2801-2809.
2. Makarov V.L., Hirose Y., Langmore J.P. Cell 1997, 88:657-666.
3. Gilson E. Nat. Rev. Mol. Cell. Biol. 2007, 8:825-838.
4. Verdun R.E., Karlseder J. Nature 2007, 447:924-931.
5. Oganesian L., Bryan T.M. Bioessays 2007, 29:155-165.
6. Lipps H.J., Rhodes D. Trends Cell Biol. 2009, 19:414-422.
7. Kelland L. Clin. Cancer Res. 2007, 13:4960-4963.
8. Han H., Hurley L.H. Trends Pharmacol. Sci. 2000, 21:136-142.
9. de Lange T., Jacks T. Cell 1999, 98:273-275.
10. d'Adda di Fagagna F., Reaper P.M., Clay-Farrace L., Fiegler H., Carr Von Zglinicki P.T., Saretzki G., Carter N.P., Jackson S.P. Nature 2003, 426:194-198.
11. Takai H., Smogorzewska A., de Lange T. Curr. Biol. 2003, 13:1549-1556.
12. Karlseder J., Broccoli D., Dai Y., Hardy S., de Lange T. Science 1999, 283:1321-1325.
13. Smogorzewska A., Karlseder J., Holtgreve-Grez H., Jauch A., de Lange T. Curr. Biol. 2002, 12:1635-1644.
14. Cech T.R. Cell 2004, 116:273-279.
15. Palm W., de Lange T. Annu. Rev. Genet. 2008, 42:301-334.
16. Morin G.B. Cell 1989, 59:521-529.
17. Cong Y., Shay J.W. Cell Res. 2008, 18:725-732.
18. Bollmann F.M. Bioessays 2008, 30:728-732.
19. Liu D., O'Connor M.S., Qin J., Songyang Z. J. Biol. Chem. 2004, 279:51338-51342.
20. Giraud-Panis M.J., Pisano S., Poulet A., Le Du M.H., Gilson E. FEBS Lett. 2010, 584:3785-3799.
21. Karlseder J., Hoke K., Mirzoeva O.K., Bakkenist C., Kastan M.B., Petrini J.H., de Lange T. PLoS Biol. 2004, 2:E240.
22. van Steensel B., Smogorzewska A., de Lange T. Cell 1998, 92:401-413.
23. Ancelin K., Brun C., Gilson E. Bioessays 1998, 20:879-883.
24. Broccoli D., Smogorzewska A., Chong L., de Lange T. Nat. Genet. 1997, 17:231-235.
25. Baumann P., Cech T.R. Science 2001, 292:1171-1175.
26. Loayza D., De Lange T. Nature 2003, 423:1013-1018.
27. Hockemeyer D., Sfeir A.J., Shay J.W., Wright W.E., de Lange T. EMBO J. 2005, 24:2667-2678.
28. Röth A., Harley C.B., Baerlocher G.M. Recent Results Cancer Res. 2010, 184:221-234.
29. Yang D., Okamoto K. Future Med. Chem. 2010, 2:619-646.
30. Neidle S., Parkinson G.N. Nat. Rev. Drug Discov. 2002, 1:383-393.
31. Franceschin M. Eur. J. Org. Chem. 2009, 14:2225-2238.
32. Drygin D., Siddiqui-Jain A., O'Brien S., Schwaebe M., Lin A., Bliesath J., Ho C.B., Proffitt C., Trent K., Whitten J.P., Lim J.K., Von Hoff D., Anderes K., Rice W.G. Cancer Res. 2009, 69:7653-7661.
33. Bates P.J., Laber D.A., Miller D.M., Thomas S.D., Trent J.O. Exp. Mol. Path. 2009, 86:151-164.
34. Neidle S. FEBS J. 2010, 277:1118-1125.
35. Lavrado J., Reszka A.P., Moreira R., Neidle S., Paulo A. Bioorg. Med. Chem. Lett. 2010, 20:7042-7045.
36. Leonetti C., Scarsella M., Riggio G., Rizzo A., Salvati E., D'Incalci M., Staszewsky L., Frapolli R., Stevens M.F., Stoppacciaro A., Mottolese M., Antoniani B., Gilson E., Zupi G., Biroccio A. Clin. Cancer Res. 2008, 14:7284-7291.
37. Biroccio A., Porru M., Rizzo A., Salvati E., D'Angelo C., Orlandi A., Passeri D., Franceschin M., Stevens M.F., Gilson E., Beretta G., Zupi G., Pisano C., Zunino F., Leonetti C. Clin. Cancer Res. 2011, 17:2227-2236.
38. Casagrande V., Salvati E., Alvino A., Bianco A., Ciammaichella A., D'Angelo C., Ginnari-Satriani L., Serrilli A.M., Iachettini S., Leonetti C., Neidle S., Ortaggi G., Porru M., Rizzo A., Franceschin M., Biroccio A. J. Med. Chem. 2011, 54:1140-1156.
39. Riou J.F. Curr. Med. Chem. Anticancer Agents 2004, 4:439-443.
40. Leonetti C., Amodei S., D'Angelo C., Rizzo A., Benassi B., Antonelli A., Elli R., Stevens M.F., D'Incalci M., Zupi G., Biroccio A. Mol. Pharmacol. 2004, 66:1138-1146.
41. Salvati E., Leonetti C., Rizzo A., Scarsella M., Mottolese M., Galati R., Sperduti I., Stevens M.F., D'Incalci M., Blasco M., Chiorino G., Bauwens S., Horard B., Gilson E., Stoppacciaro A., Zupi G., Biroccio A. J. Clin. Invest. 2007, 117:3236-3247.
42. Rizzo A., Salvati E., Porru M., D'Angelo C., Stevens M.F., D'Incalci M., Leonetti C., Gilson E., Zupi G., Biroccio A. Nucleic Acids Res. 2009, 37:5353-5364.
43. Azzalin C.M., Reichenbach P., Khoriauli L., Giulotto E., Lingner J. Science 2007, 318:798-801.
44. Schoeftner S., Blasco M.A. Nat. Cell Biol. 2008, 10:228-236.
45. de Cian A., Gros J., Guédin A., Haddi M., Lyonnais S., Guittat L., Riou J.F., Trentesaux C., Saccà B., Lacroix L., Alberti P., Mergny J.L. Nucleic Acids Symp. Ser. 2008, 52:7-8.
46. Collie G.W., Sparapani S., Parkinson G.N., Neidle S. J. Am. Chem Soc. 2011, 133:2721-2728.
47. Blackburn E.H. Nature 2000, 408:53-56.
48. Biroccio A., Rizzo A., Elli R., Koering C.E., Belleville A., Benassi B., Leonetti C., Stevens M.F., D'Incalci M., Zupi G., Gilson E. Eur. J. Cancer. 2006, 42:1881-1888.
49. Riou J.F., Guittat L., Mailliet P., Laoui A., Renou E., Petitgenet O., Mégnin-Chanet F., Hélène C., Mergny J.L. Proc. Natl. Acad. Sci. USA 2002, 99:2672-2677.
50. S. Neidle, M.A. Read, Biopolymers 56 (2000-2001) 195-208.
51. Rogakou E.P., Pilch D.R., Orr A.H., Ivanova V.S., Bonner W.M. J. Biol. Chem. 1998, 273:5858-5868.
52. O. Aparicio, J.V. Geisberg, E. Sekinger, A Yang, Z. Moqtaderi, K. Struhl, Protoc. Mol. Biol., 2005 (Chapter 21:Unit 21.3).
53. Simonet T., Zaragosi L.E., Philippe C., Lebrigand K., Schouteden C., Augereau A., Bauwens S., Ye J., Santagostino M., Giulotto E., Magdinier F., Horard B., Barbry P., Waldmann R., Gilson E. Cell Res. 2011, 21:1028-1038.
54. de Lange T. Genes Dev. 2005, 19:2100-2110.
55. Pennarun G., Granotier C., Hoffschir F., Mandine E., Biard D., Gauthier L.R., Boussin F.D. Nucleic Acids Res. 2008, 36:1741-1754.
56. Gauthier L.R., Granotier C., Hoffschir F., Etienne O., Ayouaz A., Desmaze C., Mailliet P., Biard D.S., Boussin F.D. Cell Mol. Life Sci. 2012, 69:629-640.
57. van Overbeek M., de Lange T. Curr. Biol. 2006, 16:1295-1302.
58. Lenain C., Bauwens S., Amiard S., Brunori M., Giraud-Panis M.J., Gilson E. Curr. Biol. 2006, 16:1303-1310.
59. Sfeir A., Kosiyatrakul S.T., Hockemeyer D., MacRae S.L., Karlseder J., Schildkraut C.L., de Lange T. Cell 2009, 138:90-103.
60. Martínez P., Thanasoula M., Muñoz P., Liao C., Tejera A., McNees C., Flores J.M., Fernández-Capetillo O., Tarsounas M., Blasco M.A. Genes Dev. 2009, 23:2060-2075.
61. Ye J., Lenain C., Bauwens S., Rizzo A., Saint-Léger A., Poulet A., Benarroch D., Magdinier F., Morere J., Amiard S., Verhoeyen E., Britton S., Calsou P., Salles B., Bizard A., Nadal M., Salvati E., Sabatier L., Wu Y., Biroccio A., Londoño-Vallejo A., Giraud-Panis M.J., Gilson E. Cell 2010, 142:230-242.
62. Zhu X.D., Niedernhofer L., Kuster B., Mann M., Hoeijmakers J.H., de Lange T. Mol. Cell 2003, 12:1489-1498.
63. Ourliac-Garnier I., Londoño-Vallejo A. Methods Mol. Biol. 2011, 735:33-46.
64. Miller K.M., Rog O., Cooper J.P. Nature 2006, 440:824-828.
65. Verdun R.E., Crabbe L., Haggblom C., Karlseder J. Mol. Cell 2005, 20:551-561.
66. Shen J., Loeb L.A. Mech. Ageing Dev. 2001, 122:921-944.
67. Crabbe L., Verdun R.E., Haggblom C.I., Karlseder J. Science 2004, 306:1951-1953.
68. Verdun R.E., Karlseder J. Cell 2006, 127:709-720.