메뉴 건너뛰기




Volumn 62, Issue 3, 2011, Pages 223-237

Where systems biology meets postharvest

Author keywords

Genomics; Metabolomics; Modelling; Proteomics; Systems biology; Transcriptomics

Indexed keywords


EID: 80053624131     PISSN: 09255214     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.postharvbio.2011.05.007     Document Type: Review
Times cited : (50)

References (218)
  • 1
    • 0036328894 scopus 로고    scopus 로고
    • Application of two-dimensional gel electrophoresis to detect proteins associated with harvest maturity in stonefruit
    • Abdi N., Holford P., McGlasson B. Application of two-dimensional gel electrophoresis to detect proteins associated with harvest maturity in stonefruit. Postharvest Biol. Technol. 2002, 26:1-13.
    • (2002) Postharvest Biol. Technol. , vol.26 , pp. 1-13
    • Abdi, N.1    Holford, P.2    McGlasson, B.3
  • 3
    • 33344476119 scopus 로고    scopus 로고
    • Transcriptome and selected metabolite analyses reveal multiple points of ethylene control during tomato fruit development
    • Alba R., Payton P., Fei Z., McQuinn R., Debbie P., Martin G., Tanksley S., Giovannoni J. Transcriptome and selected metabolite analyses reveal multiple points of ethylene control during tomato fruit development. Plant Cell 2005, 17:2954-2965.
    • (2005) Plant Cell , vol.17 , pp. 2954-2965
    • Alba, R.1    Payton, P.2    Fei, Z.3    McQuinn, R.4    Debbie, P.5    Martin, G.6    Tanksley, S.7    Giovannoni, J.8
  • 4
    • 40649117128 scopus 로고    scopus 로고
    • MYB transcription factors that colour our fruit
    • Allan A.C., Hellens R.P., Laing W.A. MYB transcription factors that colour our fruit. Trends Plant Sci. 2008, 13:99-102.
    • (2008) Trends Plant Sci. , vol.13 , pp. 99-102
    • Allan, A.C.1    Hellens, R.P.2    Laing, W.A.3
  • 5
    • 38149094967 scopus 로고    scopus 로고
    • Metabolomic technologies and their application to the study of plants and plant-host interactions
    • Allwood J.W., Ellis D.I., Goodacre R. Metabolomic technologies and their application to the study of plants and plant-host interactions. Physiol. Plant. 2008, 132:117-135.
    • (2008) Physiol. Plant. , vol.132 , pp. 117-135
    • Allwood, J.W.1    Ellis, D.I.2    Goodacre, R.3
  • 6
    • 0036469175 scopus 로고    scopus 로고
    • Predictive non-linear modeling of complex data by artificial neural networks
    • Almeida J. Predictive non-linear modeling of complex data by artificial neural networks. Curr. Opin. Biotechnol. 2002, 13:72-76.
    • (2002) Curr. Opin. Biotechnol. , vol.13 , pp. 72-76
    • Almeida, J.1
  • 7
    • 33750529949 scopus 로고    scopus 로고
    • Anonymous All systems go! Systems biology: a user's guide
    • Anonymous All systems go! Systems biology: a user's guide. Nat. Cell Biol. 2006, 8:1179.
    • (2006) Nat. Cell Biol. , vol.8 , pp. 1179
  • 9
    • 34547662188 scopus 로고    scopus 로고
    • Determination of metabolic fluxes in a non-steady-state system
    • Baxter C.J., Liu J.L., Fernie A.R., Sweetlove L.J. Determination of metabolic fluxes in a non-steady-state system. Phytochemistry 2007, 68:2313-2319.
    • (2007) Phytochemistry , vol.68 , pp. 2313-2319
    • Baxter, C.J.1    Liu, J.L.2    Fernie, A.R.3    Sweetlove, L.J.4
  • 10
    • 77954548758 scopus 로고    scopus 로고
    • Short-term postharvest carbon dioxide treatments induce selective molecular and metabolic changes in grape berries
    • Becatti E., Chkaiban L., Tonutti P., Forcato C., Bonghi C., Ranieri A.M. Short-term postharvest carbon dioxide treatments induce selective molecular and metabolic changes in grape berries. J. Agric. Food Chem. 2010, 58:8012-8020.
    • (2010) J. Agric. Food Chem. , vol.58 , pp. 8012-8020
    • Becatti, E.1    Chkaiban, L.2    Tonutti, P.3    Forcato, C.4    Bonghi, C.5    Ranieri, A.M.6
  • 11
    • 21444460279 scopus 로고    scopus 로고
    • Plant gene expression in the age of systems biology: integrating transcriptional and post-transcriptional events
    • Belostotsky D., Rose A. Plant gene expression in the age of systems biology: integrating transcriptional and post-transcriptional events. Trends Plant Sci. 2005, 10:347-353.
    • (2005) Trends Plant Sci. , vol.10 , pp. 347-353
    • Belostotsky, D.1    Rose, A.2
  • 12
    • 4544334043 scopus 로고    scopus 로고
    • Development and ecology in the time of systems biology
    • Benfey P. Development and ecology in the time of systems biology. Dev. Cell 2004, 7:329-330.
    • (2004) Dev. Cell , vol.7 , pp. 329-330
    • Benfey, P.1
  • 14
    • 33749255614 scopus 로고    scopus 로고
    • Applicability of an enzymatic time temperature integrator as a quality indicator for mushrooms in the distribution chain
    • Bobelyn E., Hertog M.L.A.T.M., Nicola B.M. Applicability of an enzymatic time temperature integrator as a quality indicator for mushrooms in the distribution chain. Postharvest Biol. Technol. 2006, 42:104-114.
    • (2006) Postharvest Biol. Technol. , vol.42 , pp. 104-114
    • Bobelyn, E.1    Hertog, M.L.A.T.M.2    Nicola, B.M.3
  • 15
    • 33745728711 scopus 로고    scopus 로고
    • MET-IDEA: data extraction tool for mass spectrometry-based metabolomics
    • Broeckling C., Reddy I., Duran A., Zhao X., Sumner L. MET-IDEA: data extraction tool for mass spectrometry-based metabolomics. Anal. Chem. 2006, 78:4334-4341.
    • (2006) Anal. Chem. , vol.78 , pp. 4334-4341
    • Broeckling, C.1    Reddy, I.2    Duran, A.3    Zhao, X.4    Sumner, L.5
  • 18
    • 33847657120 scopus 로고    scopus 로고
    • Imaging matrix assisted laser desorption ionization mass spectrometry: a technique to map plant metabolites within tissues at high spatial resolution
    • Burrell M.M., Earnshaw C.J., Clench M.R. Imaging matrix assisted laser desorption ionization mass spectrometry: a technique to map plant metabolites within tissues at high spatial resolution. J. Exp. Bot. 2007, 58:757-763.
    • (2007) J. Exp. Bot. , vol.58 , pp. 757-763
    • Burrell, M.M.1    Earnshaw, C.J.2    Clench, M.R.3
  • 19
    • 22044456721 scopus 로고    scopus 로고
    • Preparation of protein extracts from recalcitrant plant tissues: an evaluation of different methods for two-dimensional gel electrophoresis analysis
    • Carpentier S., Witters E., Laukens K., Deckers P., Swennen R., Panis B. Preparation of protein extracts from recalcitrant plant tissues: an evaluation of different methods for two-dimensional gel electrophoresis analysis. Proteomics 2005, 5:2497-2507.
    • (2005) Proteomics , vol.5 , pp. 2497-2507
    • Carpentier, S.1    Witters, E.2    Laukens, K.3    Deckers, P.4    Swennen, R.5    Panis, B.6
  • 21
    • 14844332708 scopus 로고    scopus 로고
    • Pathway information for systems biology
    • Cary M., Bader G., Sander C. Pathway information for systems biology. FEBS Lett. 2005, 579:1815-1820.
    • (2005) FEBS Lett. , vol.579 , pp. 1815-1820
    • Cary, M.1    Bader, G.2    Sander, C.3
  • 22
    • 22044438390 scopus 로고    scopus 로고
    • Proteomic approach to blossom-end rot in tomato fruits (Lycopersicon esculentum M.): antioxidant enzymes and the pentose phosphate pathway
    • Casado-Vela J., Selles S., Martinez R. Proteomic approach to blossom-end rot in tomato fruits (Lycopersicon esculentum M.): antioxidant enzymes and the pentose phosphate pathway. Proteomics 2005, 5:2488-2496.
    • (2005) Proteomics , vol.5 , pp. 2488-2496
    • Casado-Vela, J.1    Selles, S.2    Martinez, R.3
  • 23
    • 34250698283 scopus 로고    scopus 로고
    • Proteomic analysis of tobacco mosaic virus-infected tomato (Lycopersicon esculentum M.) fruits and detection of viral coat protein
    • Casado-Vela J., Sellés S., Martínez R.B. Proteomic analysis of tobacco mosaic virus-infected tomato (Lycopersicon esculentum M.) fruits and detection of viral coat protein. Proteomics 2006, 6:S196-S206.
    • (2006) Proteomics , vol.6
    • Casado-Vela, J.1    Sellés, S.2    Martínez, R.B.3
  • 24
    • 58849162806 scopus 로고    scopus 로고
    • Systems biology: model based evaluation and comparison of potential explanations for given biological data
    • Cedersund G., Roll J. Systems biology: model based evaluation and comparison of potential explanations for given biological data. FEBS J. 2009, 276:903-922.
    • (2009) FEBS J. , vol.276 , pp. 903-922
    • Cedersund, G.1    Roll, J.2
  • 25
    • 55249122149 scopus 로고    scopus 로고
    • Direct profiling and imaging of plant metabolites in intact tissues by using colloidal graphite-assisted laser desorption ionization mass spectrometry
    • Cha S., Zhang H., Ilarslan H.I., Wurtele E.S., Brachova L., Nikolau B.J., Yeung E.S. Direct profiling and imaging of plant metabolites in intact tissues by using colloidal graphite-assisted laser desorption ionization mass spectrometry. Plant J. 2008, 55:348-360.
    • (2008) Plant J. , vol.55 , pp. 348-360
    • Cha, S.1    Zhang, H.2    Ilarslan, H.I.3    Wurtele, E.S.4    Brachova, L.5    Nikolau, B.J.6    Yeung, E.S.7
  • 28
    • 34249329183 scopus 로고    scopus 로고
    • Proteome approach to characterize proteins induced by antagonist yeast and salicylic acid in peach fruit
    • Chan Z., Qin G., Xu X., Li B., Tian S. Proteome approach to characterize proteins induced by antagonist yeast and salicylic acid in peach fruit. J. Proteome Res. 2007, 6:1677-1688.
    • (2007) J. Proteome Res. , vol.6 , pp. 1677-1688
    • Chan, Z.1    Qin, G.2    Xu, X.3    Li, B.4    Tian, S.5
  • 29
    • 55849147365 scopus 로고    scopus 로고
    • Functions of defense-related proteins and dehydrogenases in resistance response induced by salicylic acid in sweet cherry fruits at different maturity stages
    • Chan Z., Wang Q., Xu X., Meng X., Qin G., Li B., Tian S. Functions of defense-related proteins and dehydrogenases in resistance response induced by salicylic acid in sweet cherry fruits at different maturity stages. Proteomics 2008, 8:4791-4807.
    • (2008) Proteomics , vol.8 , pp. 4791-4807
    • Chan, Z.1    Wang, Q.2    Xu, X.3    Meng, X.4    Qin, G.5    Li, B.6    Tian, S.7
  • 30
    • 16544367830 scopus 로고    scopus 로고
    • Identification of a specific isoform of tomato lipoxygenase (TomloxC) involved in the generation of fatty acid-derived flavor compounds
    • Chen G., Hackett R., Walker D., Taylor A., Lin Z., Grierson D. Identification of a specific isoform of tomato lipoxygenase (TomloxC) involved in the generation of fatty acid-derived flavor compounds. Plant Physiol. 2004, 136:2641-2651.
    • (2004) Plant Physiol. , vol.136 , pp. 2641-2651
    • Chen, G.1    Hackett, R.2    Walker, D.3    Taylor, A.4    Lin, Z.5    Grierson, D.6
  • 33
    • 0036207347 scopus 로고    scopus 로고
    • Modeling and simulation of genetic regulatory systems: a literature review
    • De Jong H. Modeling and simulation of genetic regulatory systems: a literature review. J. Comput. Biol. 2002, 9:67-103.
    • (2002) J. Comput. Biol. , vol.9 , pp. 67-103
    • De Jong, H.1
  • 34
    • 33750425007 scopus 로고    scopus 로고
    • Bioinformatics: organisms from Venus, technology from Jupiter, algorithms from Mars
    • De Moor B., Marchal K., Mathys J., Moreau Y. Bioinformatics: organisms from Venus, technology from Jupiter, algorithms from Mars. Eur. J. Control 2003, 9:237-278.
    • (2003) Eur. J. Control , vol.9 , pp. 237-278
    • De Moor, B.1    Marchal, K.2    Mathys, J.3    Moreau, Y.4
  • 36
    • 0035859039 scopus 로고    scopus 로고
    • Natural products and plant disease resistance
    • Dixon R. Natural products and plant disease resistance. Nature 2001, 411:843-847.
    • (2001) Nature , vol.411 , pp. 843-847
    • Dixon, R.1
  • 37
    • 18044372085 scopus 로고    scopus 로고
    • Engineering of plant natural product pathways
    • Dixon R. Engineering of plant natural product pathways. Curr. Opin. Plant Biol. 2005, 8:329-336.
    • (2005) Curr. Opin. Plant Biol. , vol.8 , pp. 329-336
    • Dixon, R.1
  • 39
    • 58849120545 scopus 로고    scopus 로고
    • Proper lumping in systems biology models
    • Dokoumetzidis A., Aarons L. Proper lumping in systems biology models. IET Syst. Biol. 2009, 3:40-51.
    • (2009) IET Syst. Biol. , vol.3 , pp. 40-51
    • Dokoumetzidis, A.1    Aarons, L.2
  • 40
    • 39349112675 scopus 로고    scopus 로고
    • On the making of a system theory of life: Paul A Weiss and Ludwig von bertalanffy's conceptual connection
    • Drack M., Apfalter W., Pouvreau D. On the making of a system theory of life: Paul A Weiss and Ludwig von bertalanffy's conceptual connection. Q. Rev. Biol. 2007, 82:349-373.
    • (2007) Q. Rev. Biol. , vol.82 , pp. 349-373
    • Drack, M.1    Apfalter, W.2    Pouvreau, D.3
  • 42
    • 9144257405 scopus 로고    scopus 로고
    • Toward system principles: general system theory and the alternative approach
    • Dubrovsky V. Toward system principles: general system theory and the alternative approach. Syst. Res. Behav. Sci. 2004, 21:109-122.
    • (2004) Syst. Res. Behav. Sci. , vol.21 , pp. 109-122
    • Dubrovsky, V.1
  • 43
    • 61449099319 scopus 로고    scopus 로고
    • QTL mapping of aroma compounds analysed by headspace solid-phase microextraction gas chromatography in the apple progeny 'Discovery'×'Prima'
    • Dunemann F., Ulrich D., Boudichevskaia A., Grafe C., Weber W.E. QTL mapping of aroma compounds analysed by headspace solid-phase microextraction gas chromatography in the apple progeny 'Discovery'×'Prima'. Mol. Breeding 2009, 23:501-521.
    • (2009) Mol. Breeding , vol.23 , pp. 501-521
    • Dunemann, F.1    Ulrich, D.2    Boudichevskaia, A.3    Grafe, C.4    Weber, W.E.5
  • 45
    • 18844406001 scopus 로고    scopus 로고
    • Measuring the metabolome: current analytical technologies
    • Dunn W., Bailey N., Johnson H. Measuring the metabolome: current analytical technologies. Analyst 2005, 130:606-625.
    • (2005) Analyst , vol.130 , pp. 606-625
    • Dunn, W.1    Bailey, N.2    Johnson, H.3
  • 47
    • 0024438708 scopus 로고
    • Electrospray ionization for mass-spectrometry of large biomolecules
    • Fenn J.B., Mann M., Meng C.K., Wong S.F., Whitehouse C.M. Electrospray ionization for mass-spectrometry of large biomolecules. Science 1989, 246:64-71.
    • (1989) Science , vol.246 , pp. 64-71
    • Fenn, J.B.1    Mann, M.2    Meng, C.K.3    Wong, S.F.4    Whitehouse, C.M.5
  • 49
    • 36549008292 scopus 로고    scopus 로고
    • The future of metabolic phytochemistry: larger numbers of metabolites, higher resolution, greater understanding
    • Fernie A.R. The future of metabolic phytochemistry: larger numbers of metabolites, higher resolution, greater understanding. Phytochemistry 2007, 68:2861-2880.
    • (2007) Phytochemistry , vol.68 , pp. 2861-2880
    • Fernie, A.R.1
  • 50
    • 58149330201 scopus 로고    scopus 로고
    • Metabolomics-assisted breeding: a viable option for crop improvement?
    • Fernie A.R., Schauer N. Metabolomics-assisted breeding: a viable option for crop improvement?. Trends Genet. 2009, 25:39-48.
    • (2009) Trends Genet. , vol.25 , pp. 39-48
    • Fernie, A.R.1    Schauer, N.2
  • 51
    • 55349091996 scopus 로고    scopus 로고
    • Individual-based modelling: an essential tool for microbiology
    • Ferrer J., Prats C., Lopez D. Individual-based modelling: an essential tool for microbiology. J. Biol. Phys. 2008, 34:19-37.
    • (2008) J. Biol. Phys. , vol.34 , pp. 19-37
    • Ferrer, J.1    Prats, C.2    Lopez, D.3
  • 55
    • 0034676456 scopus 로고    scopus 로고
    • Feedback control of intercellular signalling in development
    • Freeman M. Feedback control of intercellular signalling in development. Nature 2000, 408:313-319.
    • (2000) Nature , vol.408 , pp. 313-319
    • Freeman, M.1
  • 56
    • 18044365052 scopus 로고    scopus 로고
    • Systems biology - an interdisciplinary approach
    • Friboulet A., Thomas D. Systems biology - an interdisciplinary approach. Biosens. Bioelectron. 2005, 20:2404-2407.
    • (2005) Biosens. Bioelectron. , vol.20 , pp. 2404-2407
    • Friboulet, A.1    Thomas, D.2
  • 57
    • 0036683181 scopus 로고    scopus 로고
    • Linking the genes: inferring quantitative gene networks from microarray data
    • de la Fuente A., Brazhnik P., Mendes P. Linking the genes: inferring quantitative gene networks from microarray data. Trends Genet. 2002, 18:395-398.
    • (2002) Trends Genet. , vol.18 , pp. 395-398
    • de la Fuente, A.1    Brazhnik, P.2    Mendes, P.3
  • 60
    • 65349112724 scopus 로고    scopus 로고
    • Multi-scale simulation of plant tissue deformation using a model for individual cell mechanics
    • Ghysels P., Samaey G., Tijskens B., Liedekerke P.V., Ramon H., Roose D. Multi-scale simulation of plant tissue deformation using a model for individual cell mechanics. Phys. Biol. 2009, 6:016009.
    • (2009) Phys. Biol. , vol.6 , pp. 016009
    • Ghysels, P.1    Samaey, G.2    Tijskens, B.3    Liedekerke, P.V.4    Ramon, H.5    Roose, D.6
  • 61
    • 34247237057 scopus 로고    scopus 로고
    • Analysis of protein changes during grape berry ripening by 2-DE and MALDI-TOF
    • Giribaldi M., Perugini L., Sauvage F.X., Schubert A. Analysis of protein changes during grape berry ripening by 2-DE and MALDI-TOF. Proteomics 2007, 7:3154-3170.
    • (2007) Proteomics , vol.7 , pp. 3154-3170
    • Giribaldi, M.1    Perugini, L.2    Sauvage, F.X.3    Schubert, A.4
  • 63
  • 64
    • 38949196698 scopus 로고    scopus 로고
    • Utilizing tiling microarrays for whole-genome analysis in plants
    • Gregory B.D., Yazaki J., Ecker J.R. Utilizing tiling microarrays for whole-genome analysis in plants. Plant J. 2008, 53:636-644.
    • (2008) Plant J. , vol.53 , pp. 636-644
    • Gregory, B.D.1    Yazaki, J.2    Ecker, J.R.3
  • 65
    • 0032875697 scopus 로고    scopus 로고
    • Quantitative analysis of complex protein mixtures using isotope-coded affinity tags
    • Gygi S., Rist B., Gerber S., Turecek F., Gelb M., Aebersold R. Quantitative analysis of complex protein mixtures using isotope-coded affinity tags. Nat. Biotechnol. 1999, 17:994-999.
    • (1999) Nat. Biotechnol. , vol.17 , pp. 994-999
    • Gygi, S.1    Rist, B.2    Gerber, S.3    Turecek, F.4    Gelb, M.5    Aebersold, R.6
  • 66
    • 48449084795 scopus 로고    scopus 로고
    • Plant metabolomics: analytical platforms and integration with functional genomics
    • Hagel J., Facchini P. Plant metabolomics: analytical platforms and integration with functional genomics. Phytochem. Rev. 2008, 7:479-497.
    • (2008) Phytochem. Rev. , vol.7 , pp. 479-497
    • Hagel, J.1    Facchini, P.2
  • 67
    • 13244249953 scopus 로고    scopus 로고
    • Chemical derivatization and mass spectral libraries in metabolic profiling by GC/MS and LC/MS/MS
    • Halket J., Waterman D., Przyborowska A., Patel R., Fraser P., Bramley P. Chemical derivatization and mass spectral libraries in metabolic profiling by GC/MS and LC/MS/MS. J. Exp. Bot. 2005, 56:219-243.
    • (2005) J. Exp. Bot. , vol.56 , pp. 219-243
    • Halket, J.1    Waterman, D.2    Przyborowska, A.3    Patel, R.4    Fraser, P.5    Bramley, P.6
  • 68
    • 61349180117 scopus 로고    scopus 로고
    • Gene regulatory network inference: data integration in dynamic models - a review
    • Hecker M., Lambeck S., Toepfer S., van Someren E., Guthke R. Gene regulatory network inference: data integration in dynamic models - a review. Biosystems 2009, 96:86-103.
    • (2009) Biosystems , vol.96 , pp. 86-103
    • Hecker, M.1    Lambeck, S.2    Toepfer, S.3    van Someren, E.4    Guthke, R.5
  • 71
    • 0347443071 scopus 로고    scopus 로고
    • The power and pitfalls of deductive modelling
    • Woodhead Publishing Limited, L.M.M. Tijskens, M.L.A.T.M. Hertog, B.M. Nicola (Eds.)
    • Hills B.P. The power and pitfalls of deductive modelling. Food Process Modelling 2001, Woodhead Publishing Limited. L.M.M. Tijskens, M.L.A.T.M. Hertog, B.M. Nicola (Eds.).
    • (2001) Food Process Modelling
    • Hills, B.P.1
  • 74
    • 33845680826 scopus 로고    scopus 로고
    • A permeation-diffusion-reaction model of gas transport in cellular tissue of plant materials
    • Ho Q.T., Verlinden B.E., Verboven P., Vandewalle S., Nicola B.M. A permeation-diffusion-reaction model of gas transport in cellular tissue of plant materials. J. Exp. Bot. 2006, 57:4215-4224.
    • (2006) J. Exp. Bot. , vol.57 , pp. 4215-4224
    • Ho, Q.T.1    Verlinden, B.E.2    Verboven, P.3    Vandewalle, S.4    Nicola, B.M.5
  • 75
    • 67649208263 scopus 로고    scopus 로고
    • Identification of differentially expressed subnetworks based on multivariate ANOVA
    • 10 (article no.: 128).
    • Hwang, T., Park, T., 2009. Identification of differentially expressed subnetworks based on multivariate ANOVA. BMC Bioinform. 10 (article no.: 128).
    • (2009) BMC Bioinform.
    • Hwang, T.1    Park, T.2
  • 77
    • 70350596222 scopus 로고    scopus 로고
    • A preliminary investigation into a genetic basis for cis-3-hexen-1-ol odour perception: a genome-wide association approach
    • Jaeger S.R., Mcrae J.F., Salzman Y., Williams L., Newcomb R.D. A preliminary investigation into a genetic basis for cis-3-hexen-1-ol odour perception: a genome-wide association approach. Food Qual. Prefer. 2010, 21:121-131.
    • (2010) Food Qual. Prefer. , vol.21 , pp. 121-131
    • Jaeger, S.R.1    Mcrae, J.F.2    Salzman, Y.3    Williams, L.4    Newcomb, R.D.5
  • 81
    • 0033982936 scopus 로고    scopus 로고
    • KEGG: Kyoto Encyclopedia of Genes and Genomes
    • Kanehisa M., Goto S. KEGG: Kyoto Encyclopedia of Genes and Genomes. Nucleic Acids Res. 2000, 28:27-30.
    • (2000) Nucleic Acids Res. , vol.28 , pp. 27-30
    • Kanehisa, M.1    Goto, S.2
  • 82
    • 0024289037 scopus 로고
    • Laser desorption ionization of proteins with molecular masses exceeding 10000 daltons
    • Karas M., Hillenkamp F. Laser desorption ionization of proteins with molecular masses exceeding 10000 daltons. Anal. Chem. 1988, 60:2299-2301.
    • (1988) Anal. Chem. , vol.60 , pp. 2299-2301
    • Karas, M.1    Hillenkamp, F.2
  • 83
    • 13244258397 scopus 로고    scopus 로고
    • Application of partial least squares discriminant analysis to two-dimensional difference gel studies in expression proteomics
    • Karp N., Griffin J., Lilley K. Application of partial least squares discriminant analysis to two-dimensional difference gel studies in expression proteomics. Proteomics 2005, 5:81-90.
    • (2005) Proteomics , vol.5 , pp. 81-90
    • Karp, N.1    Griffin, J.2    Lilley, K.3
  • 86
    • 62349101060 scopus 로고    scopus 로고
    • Genetical metabolomics: closing in on phenotypes
    • Keurentjes J.J.B. Genetical metabolomics: closing in on phenotypes. Curr. Opin. Plant Biol. 2009, 12:223-230.
    • (2009) Curr. Opin. Plant Biol. , vol.12 , pp. 223-230
    • Keurentjes, J.J.B.1
  • 87
    • 34547094543 scopus 로고    scopus 로고
    • Ethylene receptor degradation controls the timing of ripening in tomato fruit
    • Kevany B.M., Tieman D.M., Taylor M.G., Dal Cin V., Klee H.J. Ethylene receptor degradation controls the timing of ripening in tomato fruit. Plant J. 2007, 51:458-467.
    • (2007) Plant J. , vol.51 , pp. 458-467
    • Kevany, B.M.1    Tieman, D.M.2    Taylor, M.G.3    Dal Cin, V.4    Klee, H.J.5
  • 89
    • 0003065454 scopus 로고    scopus 로고
    • Systems biology: toward system-level understanding of biological systems
    • MIT Press, H. Kitano (Ed.)
    • Kitano H. Systems biology: toward system-level understanding of biological systems. Foundations of Systems Biology 2001, MIT Press. H. Kitano (Ed.).
    • (2001) Foundations of Systems Biology
    • Kitano, H.1
  • 90
    • 0036500993 scopus 로고    scopus 로고
    • Systems biology: a brief overview
    • Kitano H. Systems biology: a brief overview. Science 2002, 295:1662-1664.
    • (2002) Science , vol.295 , pp. 1662-1664
    • Kitano, H.1
  • 91
    • 68749116325 scopus 로고    scopus 로고
    • Systems biology and the virtual physiological human
    • Kohl P., Noble D. Systems biology and the virtual physiological human. Mol. Syst. Biol. 2009, 5.
    • (2009) Mol. Syst. Biol. , pp. 5
    • Kohl, P.1    Noble, D.2
  • 92
    • 38949179112 scopus 로고    scopus 로고
    • Defining systems biology: through the eyes of a biochemist
    • Kolch W. Defining systems biology: through the eyes of a biochemist. IET Syst. Biol. 2008, 2:5-7.
    • (2008) IET Syst. Biol. , vol.2 , pp. 5-7
    • Kolch, W.1
  • 94
    • 0037155938 scopus 로고    scopus 로고
    • The seven pillars of life
    • Koshland D. The seven pillars of life. Science 2002, 295:2215-2216.
    • (2002) Science , vol.295 , pp. 2215-2216
    • Koshland, D.1
  • 95
    • 58849137994 scopus 로고    scopus 로고
    • Systems biology: experimental design
    • Kreutz C., Timmer J. Systems biology: experimental design. FEBS J. 2009, 276:923-942.
    • (2009) FEBS J. , vol.276 , pp. 923-942
    • Kreutz, C.1    Timmer, J.2
  • 96
    • 33746211196 scopus 로고    scopus 로고
    • Omics-driven biomarker discovery in nutrition and health
    • Kussmann M., Raymond F., Affolter M. Omics-driven biomarker discovery in nutrition and health. J. Biotechnol. 2006, 124:758-787.
    • (2006) J. Biotechnol. , vol.124 , pp. 758-787
    • Kussmann, M.1    Raymond, F.2    Affolter, M.3
  • 97
    • 18544376036 scopus 로고    scopus 로고
    • Mass spectrometry-based proteomics in the life sciences
    • Lane C. Mass spectrometry-based proteomics in the life sciences. Cell Mol. Life Sci. 2005, 62:848-869.
    • (2005) Cell Mol. Life Sci. , vol.62 , pp. 848-869
    • Lane, C.1
  • 100
    • 18844409184 scopus 로고    scopus 로고
    • Complementary identification of multiple flux distributions and multiple metabolic pathways
    • Lee D., Fan L., Park S., Lee S., Shafie S., Bertok B., Friedler F. Complementary identification of multiple flux distributions and multiple metabolic pathways. Metab. Eng. 2005, 7:182-200.
    • (2005) Metab. Eng. , vol.7 , pp. 182-200
    • Lee, D.1    Fan, L.2    Park, S.3    Lee, S.4    Shafie, S.5    Bertok, B.6    Friedler, F.7
  • 101
    • 27644436945 scopus 로고    scopus 로고
    • A virtual peach fruit model simulating changes in fruit quality during the final stage of fruit growth
    • Lescourret F., Genard M. A virtual peach fruit model simulating changes in fruit quality during the final stage of fruit growth. Tree Physiol. 2005, 25:1303-1315.
    • (2005) Tree Physiol. , vol.25 , pp. 1303-1315
    • Lescourret, F.1    Genard, M.2
  • 102
    • 38349140051 scopus 로고    scopus 로고
    • Atmospheric pressure infrared MALDI imaging mass spectrometry for plant metabolomics
    • Li Y., Shrestha B., Vertes A. Atmospheric pressure infrared MALDI imaging mass spectrometry for plant metabolomics. Anal. Chem. 2008, 80:407-420.
    • (2008) Anal. Chem. , vol.80 , pp. 407-420
    • Li, Y.1    Shrestha, B.2    Vertes, A.3
  • 103
    • 44949161995 scopus 로고    scopus 로고
    • Metabolic flux analysis in plants: from intelligent design to rational engineering
    • Libourel I.G.L., Shachar-Hill Y. Metabolic flux analysis in plants: from intelligent design to rational engineering. Annu. Rev. Plant Biol. 2008, 59:625-650.
    • (2008) Annu. Rev. Plant Biol. , vol.59 , pp. 625-650
    • Libourel, I.G.L.1    Shachar-Hill, Y.2
  • 104
    • 34248580879 scopus 로고    scopus 로고
    • Gas chromatography mass spectrometry-based metabolite profiling in plants
    • Lisec J., Schauer N., Kopka J., Willmitzer L., Fernie A.R. Gas chromatography mass spectrometry-based metabolite profiling in plants. Nat. Protoc. 2006, 1:387-396.
    • (2006) Nat. Protoc. , vol.1 , pp. 387-396
    • Lisec, J.1    Schauer, N.2    Kopka, J.3    Willmitzer, L.4    Fernie, A.R.5
  • 106
    • 65249132985 scopus 로고    scopus 로고
    • MetAlign: interface-driven, versatile metabolomics tool for hyphenated full-scan mass spectrometry data preprocessing
    • Lommen A. MetAlign: interface-driven, versatile metabolomics tool for hyphenated full-scan mass spectrometry data preprocessing. Anal. Chem. 2009, 81:3079-3086.
    • (2009) Anal. Chem. , vol.81 , pp. 3079-3086
    • Lommen, A.1
  • 107
    • 55849151275 scopus 로고    scopus 로고
    • Systems approaches to identifying gene regulatory networks in plants
    • Long T.A., Rady S.M., Benfey P.N. Systems approaches to identifying gene regulatory networks in plants. Annu. Rev. Cell Dev. Biol. 2008, 24:81-103.
    • (2008) Annu. Rev. Cell Dev. Biol. , vol.24 , pp. 81-103
    • Long, T.A.1    Rady, S.M.2    Benfey, P.N.3
  • 109
    • 60549092113 scopus 로고    scopus 로고
    • Generation of a predicted protein database from EST data and application to iTRAQ analyses in grape (Vitis vinifera cv. Cabernet Sauvignon) berries at ripening initiation
    • 10 (article no.: 50).
    • Lucker, J., Laszczak, M., Smith, D., Lund, S.T., 2009. Generation of a predicted protein database from EST data and application to iTRAQ analyses in grape (Vitis vinifera cv. Cabernet Sauvignon) berries at ripening initiation. BMC Genomics 10 (article no.: 50).
    • (2009) BMC Genomics
    • Lucker, J.1    Laszczak, M.2    Smith, D.3    Lund, S.T.4
  • 110
    • 14844338549 scopus 로고    scopus 로고
    • Volatile metabolic profiling for discrimination of potato tubers inoculated with dry and soft rot pathogens
    • Lui L., Vikram A., Abu-Nada Y., Kushalappa A., Raghavan G., Al-Mughrabi K. Volatile metabolic profiling for discrimination of potato tubers inoculated with dry and soft rot pathogens. Am. J. Potato Res. 2005, 82:1-8.
    • (2005) Am. J. Potato Res. , vol.82 , pp. 1-8
    • Lui, L.1    Vikram, A.2    Abu-Nada, Y.3    Kushalappa, A.4    Raghavan, G.5    Al-Mughrabi, K.6
  • 111
    • 0033152142 scopus 로고    scopus 로고
    • The chemokine system: redundancy for robust outputs
    • Mantovani A. The chemokine system: redundancy for robust outputs. Immunol. Today 1999, 20:254-257.
    • (1999) Immunol. Today , vol.20 , pp. 254-257
    • Mantovani, A.1
  • 113
    • 43449094701 scopus 로고    scopus 로고
    • Transcriptome profiling of grapefruit flavedo following exposure to low temperature and conditioning treatments uncovers principal molecular components involved in chilling tolerance and susceptibility
    • Maul P., McCollum G.T., Popp M., Guy C.L., Porat R. Transcriptome profiling of grapefruit flavedo following exposure to low temperature and conditioning treatments uncovers principal molecular components involved in chilling tolerance and susceptibility. Plant Cell Environ. 2008, 31:752-768.
    • (2008) Plant Cell Environ. , vol.31 , pp. 752-768
    • Maul, P.1    McCollum, G.T.2    Popp, M.3    Guy, C.L.4    Porat, R.5
  • 115
    • 53749100896 scopus 로고    scopus 로고
    • Imaging nutrient distributions in plant tissue using time-of-flight secondary ion mass spectrometry and scanning electron microscopy
    • Metzner R., Schneider H.U., Breuer U., Schroeder W.H. Imaging nutrient distributions in plant tissue using time-of-flight secondary ion mass spectrometry and scanning electron microscopy. Plant Physiol. 2008, 147:1774-1787.
    • (2008) Plant Physiol. , vol.147 , pp. 1774-1787
    • Metzner, R.1    Schneider, H.U.2    Breuer, U.3    Schroeder, W.H.4
  • 118
    • 51649113110 scopus 로고    scopus 로고
    • Intra- and inter-metabolite correlation spectroscopy of tomato metabolomics data obtained by liquid chromatography-mass spectrometry and nuclear magnetic resonance
    • Moco S., Forshed J., De Vos R.C.H., Bino R.J., Vervoort J. Intra- and inter-metabolite correlation spectroscopy of tomato metabolomics data obtained by liquid chromatography-mass spectrometry and nuclear magnetic resonance. Metabolomics 2008, 4:202-215.
    • (2008) Metabolomics , vol.4 , pp. 202-215
    • Moco, S.1    Forshed, J.2    De Vos, R.C.H.3    Bino, R.J.4    Vervoort, J.5
  • 119
    • 65249147184 scopus 로고    scopus 로고
    • Plant micrometabolomics: the analysis of endogenous metabolites present in a plant cell or tissue
    • Moco S., Schneider B., Vervoort J. Plant micrometabolomics: the analysis of endogenous metabolites present in a plant cell or tissue. J. Proteome Res. 2009, 8:1694-1703.
    • (2009) J. Proteome Res. , vol.8 , pp. 1694-1703
    • Moco, S.1    Schneider, B.2    Vervoort, J.3
  • 120
    • 33747830489 scopus 로고    scopus 로고
    • Quantitative modeling in cell biology: What is it good for?
    • Mogilner A., Wollman R., Marshall W.F. Quantitative modeling in cell biology: What is it good for?. Dev. Cell 2006, 11:279-287.
    • (2006) Dev. Cell , vol.11 , pp. 279-287
    • Mogilner, A.1    Wollman, R.2    Marshall, W.F.3
  • 123
    • 11444257734 scopus 로고    scopus 로고
    • Developing pineapple fruit has a small transcriptome dominated by metallothionein
    • Moyle R., Fairbairn D., Ripi J., Crowe M., Botella J. Developing pineapple fruit has a small transcriptome dominated by metallothionein. J. Exp. Bot. 2005, 56:101-112.
    • (2005) J. Exp. Bot. , vol.56 , pp. 101-112
    • Moyle, R.1    Fairbairn, D.2    Ripi, J.3    Crowe, M.4    Botella, J.5
  • 124
    • 33646832415 scopus 로고    scopus 로고
    • Genome-wide analysis of the erf gene family in Arabidopsis and rice
    • Nakano T., Suzuki K., Fujimura T., Shinshi H. Genome-wide analysis of the erf gene family in Arabidopsis and rice. Plant Physiol. 2006, 140:411-432.
    • (2006) Plant Physiol. , vol.140 , pp. 411-432
    • Nakano, T.1    Suzuki, K.2    Fujimura, T.3    Shinshi, H.4
  • 126
    • 18044371993 scopus 로고    scopus 로고
    • The modelling of heat and mass transfer
    • Woodhead Publishing Limited, L.M.M. Tijskens, M.L.A.T.M. Hertog, B.M. Nicola (Eds.)
    • Nicola B., Verboven P., Scheerlinck N. The modelling of heat and mass transfer. Food Process Modelling 2001, Woodhead Publishing Limited. L.M.M. Tijskens, M.L.A.T.M. Hertog, B.M. Nicola (Eds.).
    • (2001) Food Process Modelling
    • Nicola, B.1    Verboven, P.2    Scheerlinck, N.3
  • 128
    • 0028763687 scopus 로고
    • Verification, validation, and confirmation of numerical-models in the earth-sciences
    • Oreskes N., Shraderfrechette K., Belitz K. Verification, validation, and confirmation of numerical-models in the earth-sciences. Science 1994, 263:641-646.
    • (1994) Science , vol.263 , pp. 641-646
    • Oreskes, N.1    Shraderfrechette, K.2    Belitz, K.3
  • 130
    • 67349100690 scopus 로고    scopus 로고
    • A MYB transcription factor regulates anthocyanin biosynthesis in mangosteen (Garcinia mangostana L.) fruit during ripening
    • Palapol Y., Ketsa S., Lin-Wang K., Ferguson I.B., Allan A.C. A MYB transcription factor regulates anthocyanin biosynthesis in mangosteen (Garcinia mangostana L.) fruit during ripening. Planta 2009, 229:1323-1334.
    • (2009) Planta , vol.229 , pp. 1323-1334
    • Palapol, Y.1    Ketsa, S.2    Lin-Wang, K.3    Ferguson, I.B.4    Allan, A.C.5
  • 131
    • 47249096975 scopus 로고    scopus 로고
    • Application of systems biology for bioprocess development
    • Park J.H., Lee S.Y., Kim T.Y., Kim H.U. Application of systems biology for bioprocess development. Trends Biotechnol. 2008, 26:404-412.
    • (2008) Trends Biotechnol. , vol.26 , pp. 404-412
    • Park, J.H.1    Lee, S.Y.2    Kim, T.Y.3    Kim, H.U.4
  • 132
    • 33745960907 scopus 로고    scopus 로고
    • Identification of genes with potential roles in apple fruit development and biochemistry through large-scale statistical analysis of expressed sequence tags
    • Park S., Sugimoto N., Larson M.D., Beaudry R., van Nocker S. Identification of genes with potential roles in apple fruit development and biochemistry through large-scale statistical analysis of expressed sequence tags. Plant Physiol. 2006, 141:811-824.
    • (2006) Plant Physiol. , vol.141 , pp. 811-824
    • Park, S.1    Sugimoto, N.2    Larson, M.D.3    Beaudry, R.4    van Nocker, S.5
  • 134
  • 135
    • 52949126683 scopus 로고    scopus 로고
    • Physiological implications of controlled atmosphere storage of 'Conference' pears (Pyrus communis L.): a proteomic approach
    • Pedreschi R., Hertog M., Robben J., Noben J.P., Nicola B. Physiological implications of controlled atmosphere storage of 'Conference' pears (Pyrus communis L.): a proteomic approach. Postharvest Biol. Technol. 2008, 50:110-116.
    • (2008) Postharvest Biol. Technol. , vol.50 , pp. 110-116
    • Pedreschi, R.1    Hertog, M.2    Robben, J.3    Noben, J.P.4    Nicola, B.5
  • 137
    • 0038620211 scopus 로고    scopus 로고
    • Prediction of clinical outcome with microarray data: a partial least squares discriminant analysis (PLS-DA) approach
    • Perez-Enciso M., Tenenhaus M. Prediction of clinical outcome with microarray data: a partial least squares discriminant analysis (PLS-DA) approach. Hum. Genet. 2003, 112:581-592.
    • (2003) Hum. Genet. , vol.112 , pp. 581-592
    • Perez-Enciso, M.1    Tenenhaus, M.2
  • 139
    • 57049155972 scopus 로고    scopus 로고
    • Differential fruit gene expression in two strawberry cultivars in response to elevated CO2 during storage revealed by a heterologous fruit microarray approach
    • Ponce-Valadez M., Fellman S.M., Giovannoni J., Gan S.S., Watkins C.B. Differential fruit gene expression in two strawberry cultivars in response to elevated CO2 during storage revealed by a heterologous fruit microarray approach. Postharvest Biol. Technol. 2009, 51:131-140.
    • (2009) Postharvest Biol. Technol. , vol.51 , pp. 131-140
    • Ponce-Valadez, M.1    Fellman, S.M.2    Giovannoni, J.3    Gan, S.S.4    Watkins, C.B.5
  • 140
    • 0142186707 scopus 로고    scopus 로고
    • Network-based analysis of metabolic regulation in the human red blood cell
    • Price N., Reed J., Papin J., Wiback S., Palsson B. Network-based analysis of metabolic regulation in the human red blood cell. J. Theor. Biol. 2003, 225:185-194.
    • (2003) J. Theor. Biol. , vol.225 , pp. 185-194
    • Price, N.1    Reed, J.2    Papin, J.3    Wiback, S.4    Palsson, B.5
  • 141
    • 34548528157 scopus 로고    scopus 로고
    • Biochemical and statistical network models for systems biology
    • Price N.D., Shmulevich I. Biochemical and statistical network models for systems biology. Curr. Opin. Biotechnol. 2007, 18:365-370.
    • (2007) Curr. Opin. Biotechnol. , vol.18 , pp. 365-370
    • Price, N.D.1    Shmulevich, I.2
  • 143
    • 42049115910 scopus 로고    scopus 로고
    • From proteomics toward systems biology: integration of different types of proteomics data into network models
    • Rho S., You S., Kim Y., Hwang D. From proteomics toward systems biology: integration of different types of proteomics data into network models. BMB Rep. 2008, 41:184-193.
    • (2008) BMB Rep. , vol.41 , pp. 184-193
    • Rho, S.1    You, S.2    Kim, Y.3    Hwang, D.4
  • 144
    • 63249106570 scopus 로고    scopus 로고
    • Postharvest water loss induces marked changes in transcript profiling in skins of wine grape berries
    • Rizzini F.M., Bonghi C., Tonutti P. Postharvest water loss induces marked changes in transcript profiling in skins of wine grape berries. Postharvest Biol. Technol. 2009, 52:247-253.
    • (2009) Postharvest Biol. Technol. , vol.52 , pp. 247-253
    • Rizzini, F.M.1    Bonghi, C.2    Tonutti, P.3
  • 146
    • 33748567134 scopus 로고    scopus 로고
    • Gel-free mass spectrometry-based high throughput proteomics: tools for studying biological response of proteins and proteomes
    • Roe M.R., Griffin T.J. Gel-free mass spectrometry-based high throughput proteomics: tools for studying biological response of proteins and proteomes. Proteomics 2006, 6:4678-4687.
    • (2006) Proteomics , vol.6 , pp. 4678-4687
    • Roe, M.R.1    Griffin, T.J.2
  • 147
    • 0034218717 scopus 로고    scopus 로고
    • Simultaneous analysis of metabolites in potato tuber by gas chromatography-mass spectrometry
    • Roessner U., Wagner C., Kopka J., Trethewey R., Willmitzer L. Simultaneous analysis of metabolites in potato tuber by gas chromatography-mass spectrometry. Plant J. 2000, 23:131-142.
    • (2000) Plant J. , vol.23 , pp. 131-142
    • Roessner, U.1    Wagner, C.2    Kopka, J.3    Trethewey, R.4    Willmitzer, L.5
  • 148
    • 4143116713 scopus 로고    scopus 로고
    • Kinetics of labelling of organic and amino acids in potato tubers by gas chromatography-mass spectrometry following incubation in 13C labelled isotopes
    • Roessner-Tunali U., Liu J., Leisse A., Balbo I., Perez-Melis A., Willmitzer L., Fernie A. Kinetics of labelling of organic and amino acids in potato tubers by gas chromatography-mass spectrometry following incubation in 13C labelled isotopes. Plant J. 2004, 39:668-679.
    • (2004) Plant J. , vol.39 , pp. 668-679
    • Roessner-Tunali, U.1    Liu, J.2    Leisse, A.3    Balbo, I.4    Perez-Melis, A.5    Willmitzer, L.6    Fernie, A.7
  • 149
    • 0033979908 scopus 로고    scopus 로고
    • Strategies for metabolic flux analysis in plants using isotope labelling
    • Roscher A., Kruger N., Ratcliffe R. Strategies for metabolic flux analysis in plants using isotope labelling. J. Biotechnol. 2000, 77:81-102.
    • (2000) J. Biotechnol. , vol.77 , pp. 81-102
    • Roscher, A.1    Kruger, N.2    Ratcliffe, R.3
  • 152
    • 80051853408 scopus 로고    scopus 로고
    • Prestorage ultraviolet-white light irradation alters apple peel metabolome
    • Rudell D.R., Mattheis J.P., Curry F.A. Prestorage ultraviolet-white light irradation alters apple peel metabolome. J. Agric. Food Chem. 2008, 56:1138-1147.
    • (2008) J. Agric. Food Chem. , vol.56 , pp. 1138-1147
    • Rudell, D.R.1    Mattheis, J.P.2    Curry, F.A.3
  • 153
  • 154
    • 57049163004 scopus 로고    scopus 로고
    • Superficial scald development and related metabolism is modified by postharvest light irradiation
    • Rudell D.R., Mattheis J.R. Superficial scald development and related metabolism is modified by postharvest light irradiation. Postharvest Biol. Technol. 2009, 51:174-182.
    • (2009) Postharvest Biol. Technol. , vol.51 , pp. 174-182
    • Rudell, D.R.1    Mattheis, J.R.2
  • 161
    • 13244297050 scopus 로고    scopus 로고
    • Metabolic profiling of leaves and fruit of wild species tomato: a survey of the Solanum lycopersicum complex
    • Schauer N., Zamir D., Fernie A. Metabolic profiling of leaves and fruit of wild species tomato: a survey of the Solanum lycopersicum complex. J. Exp. Bot. 2005, 56:297-307.
    • (2005) J. Exp. Bot. , vol.56 , pp. 297-307
    • Schauer, N.1    Zamir, D.2    Fernie, A.3
  • 164
    • 0034064689 scopus 로고    scopus 로고
    • A general definition of metabolic pathways useful for systematic organization and analysis of complex metabolic networks
    • Schuster S., Fell D., Dandekar T. A general definition of metabolic pathways useful for systematic organization and analysis of complex metabolic networks. Nat. Biotechnol. 2000, 18:326-332.
    • (2000) Nat. Biotechnol. , vol.18 , pp. 326-332
    • Schuster, S.1    Fell, D.2    Dandekar, T.3
  • 165
    • 0036125304 scopus 로고    scopus 로고
    • Modelling of simple and complex calcium oscillations - from single-cell responses to intercellular signalling
    • Schuster S., Marhl M., Hofer T. Modelling of simple and complex calcium oscillations - from single-cell responses to intercellular signalling. Eur. J. Biochem. 2002, 269:1333-1355.
    • (2002) Eur. J. Biochem. , vol.269 , pp. 1333-1355
    • Schuster, S.1    Marhl, M.2    Hofer, T.3
  • 171
    • 11844251979 scopus 로고    scopus 로고
    • In-situ probing of the biotic-abiotic boundary of plants by laser desorption/ionization time-of-flight mass spectrometry
    • Sluszny C., Yeung E., Nikolau B. In-situ probing of the biotic-abiotic boundary of plants by laser desorption/ionization time-of-flight mass spectrometry. J. Am. Soc. Mass. Spectrom. 2005, 16:107-115.
    • (2005) J. Am. Soc. Mass. Spectrom. , vol.16 , pp. 107-115
    • Sluszny, C.1    Yeung, E.2    Nikolau, B.3
  • 172
    • 32444446805 scopus 로고    scopus 로고
    • XCMS: processing mass spectrometry data for metabolite profiling using nonlinear peak alignment, matching, and identification
    • Smith C., Want E., O'Maille G., Abagyan R., Siuzdak G. XCMS: processing mass spectrometry data for metabolite profiling using nonlinear peak alignment, matching, and identification. Anal. Chem. 2006, 78:779-787.
    • (2006) Anal. Chem. , vol.78 , pp. 779-787
    • Smith, C.1    Want, E.2    O'Maille, G.3    Abagyan, R.4    Siuzdak, G.5
  • 173
    • 12344296457 scopus 로고    scopus 로고
    • A reductionist's systems biology - opinion
    • Sorger P. A reductionist's systems biology - opinion. Curr. Opin. Cell Biol. 2005, 17:9-11.
    • (2005) Curr. Opin. Cell Biol. , vol.17 , pp. 9-11
    • Sorger, P.1
  • 174
    • 4444335470 scopus 로고    scopus 로고
    • The ABC's (and XYZ's) of peptide sequencing
    • Steen H., Mann M. The ABC's (and XYZ's) of peptide sequencing. Nat. Rev. Mol. Cell Biol. 2004, 5:699-711.
    • (2004) Nat. Rev. Mol. Cell Biol. , vol.5 , pp. 699-711
    • Steen, H.1    Mann, M.2
  • 176
    • 0038281453 scopus 로고    scopus 로고
    • Observing and interpreting correlations in metabolomic networks
    • Steuer R., Kurths J., Fiehn O., Weckwerth W. Observing and interpreting correlations in metabolomic networks. Method Biochem. Anal. 2003, 19:1019-1026.
    • (2003) Method Biochem. Anal. , vol.19 , pp. 1019-1026
    • Steuer, R.1    Kurths, J.2    Fiehn, O.3    Weckwerth, W.4
  • 177
    • 34447505044 scopus 로고    scopus 로고
    • Metabolomic approach to identifying bioactive compounds in berries: advances toward fruit nutritional enhancement
    • Stewart D., McDougall G.J., Sungurtas J., Verrall S., Graham J., Martinussen I. Metabolomic approach to identifying bioactive compounds in berries: advances toward fruit nutritional enhancement. Mol. Nutr. Food Res. 2007, 51:645-651.
    • (2007) Mol. Nutr. Food Res. , vol.51 , pp. 645-651
    • Stewart, D.1    McDougall, G.J.2    Sungurtas, J.3    Verrall, S.4    Graham, J.5    Martinussen, I.6
  • 178
    • 56449129806 scopus 로고    scopus 로고
    • Omics databases in plant science: key to systems biology
    • Suwabe K., Yano K. Omics databases in plant science: key to systems biology. Curr. Top. Microbiol. 2008, 25:413-422.
    • (2008) Curr. Top. Microbiol. , vol.25 , pp. 413-422
    • Suwabe, K.1    Yano, K.2
  • 179
    • 0037783266 scopus 로고    scopus 로고
    • Predictive metabolic engineering: a goal for systems biology
    • Sweetlove L., Last R., Fernie A. Predictive metabolic engineering: a goal for systems biology. Plant Physiol. 2003, 132:420-425.
    • (2003) Plant Physiol. , vol.132 , pp. 420-425
    • Sweetlove, L.1    Last, R.2    Fernie, A.3
  • 181
    • 67649506201 scopus 로고    scopus 로고
    • Apple ethylene receptor protein concentrations are affected by ethylene, and differ in cultivars that have different storage life
    • Tatsuki M., Hayama H., Nakamura Y. Apple ethylene receptor protein concentrations are affected by ethylene, and differ in cultivars that have different storage life. Planta 2009, 230:407-417.
    • (2009) Planta , vol.230 , pp. 407-417
    • Tatsuki, M.1    Hayama, H.2    Nakamura, Y.3
  • 182
    • 60649089559 scopus 로고    scopus 로고
    • Highly sensitive feature detection for high resolution LC/MS
    • 9 (article no.: 504).
    • Tautenhahn, R., Bottcher, C., Neumann, S., 2008. Highly sensitive feature detection for high resolution LC/MS. BMC Bioinform. 9 (article no.: 504).
    • (2008) BMC Bioinform.
    • Tautenhahn, R.1    Bottcher, C.2    Neumann, S.3
  • 183
    • 70350463618 scopus 로고    scopus 로고
    • Isolation and functional characterization of cold-regulated promoters, by digitally identifying peach fruit cold-induced genes from a large EST dataset
    • 9 (article no.: 121).
    • Tittarelli, A., Santiago, M., Morales, A., Meisel, L.A., Silva, H., 2009. Isolation and functional characterization of cold-regulated promoters, by digitally identifying peach fruit cold-induced genes from a large EST dataset. BMC Plant Biol. 9 (article no.: 121).
    • (2009) BMC Plant Biol.
    • Tittarelli, A.1    Santiago, M.2    Morales, A.3    Meisel, L.A.4    Silva, H.5
  • 184
    • 62549159971 scopus 로고    scopus 로고
    • Web-based resources for mass-spectrometry-based metabolomics: a user's guide
    • Tohge T., Fernie A.R. Web-based resources for mass-spectrometry-based metabolomics: a user's guide. Phytochemistry 2009, 70:450-456.
    • (2009) Phytochemistry , vol.70 , pp. 450-456
    • Tohge, T.1    Fernie, A.R.2
  • 185
    • 30944433988 scopus 로고    scopus 로고
    • The use of microarray mu PEACH1.0 to investigate transcriptome changes during transition from pre-climacteric to climacteric phase in peach fruit
    • Trainotti L., Bonghi C., Ziliotto F., Zanin D., Rasori A., Casadoro G., Ramina A., Tonutti P. The use of microarray mu PEACH1.0 to investigate transcriptome changes during transition from pre-climacteric to climacteric phase in peach fruit. Plant Sci. 2006, 170:606-613.
    • (2006) Plant Sci. , vol.170 , pp. 606-613
    • Trainotti, L.1    Bonghi, C.2    Ziliotto, F.3    Zanin, D.4    Rasori, A.5    Casadoro, G.6    Ramina, A.7    Tonutti, P.8
  • 186
    • 33750993479 scopus 로고    scopus 로고
    • A brief history of systems biology - " Every object that biology studies is a system of systems." Francois Jacob (1974)
    • Trewavas A. A brief history of systems biology - " Every object that biology studies is a system of systems." Francois Jacob (1974). Plant Cell 2006, 18:2420-2430.
    • (2006) Plant Cell , vol.18 , pp. 2420-2430
    • Trewavas, A.1
  • 187
    • 0343376097 scopus 로고    scopus 로고
    • Difference gel electrophoresis: a single gel method for detecting changes in protein extracts
    • Unlu M., Morgan M., Minden J. Difference gel electrophoresis: a single gel method for detecting changes in protein extracts. Electrophoresis 1997, 18:2071-2077.
    • (1997) Electrophoresis , vol.18 , pp. 2071-2077
    • Unlu, M.1    Morgan, M.2    Minden, J.3
  • 188
    • 42149194929 scopus 로고    scopus 로고
    • A correlation network approach to metabolic data analysis for tomato fruits
    • Ursem R., Tikunov Y., Bovy A., van Berloo R., van Eeuwijk F. A correlation network approach to metabolic data analysis for tomato fruits. Euphytica 2008, 161:181-193.
    • (2008) Euphytica , vol.161 , pp. 181-193
    • Ursem, R.1    Tikunov, Y.2    Bovy, A.3    van Berloo, R.4    van Eeuwijk, F.5
  • 189
    • 68249092895 scopus 로고    scopus 로고
    • A guide to using MapMan to visualize and compare omics data in plants: a case study in the crop species, maize
    • Usadel B., Poree F., Nagel A., Lohse M., Czedik-Eysenberg A., Stitt M. A guide to using MapMan to visualize and compare omics data in plants: a case study in the crop species, maize. Plant Cell Environ. 2009, 32:1211-1229.
    • (2009) Plant Cell Environ. , vol.32 , pp. 1211-1229
    • Usadel, B.1    Poree, F.2    Nagel, A.3    Lohse, M.4    Czedik-Eysenberg, A.5    Stitt, M.6
  • 192
    • 0348073230 scopus 로고    scopus 로고
    • The power and pitfalls of inductive modelling
    • Woodhead Publishing Limited, L.M.M. Tijskens, M.L.A.T.M. Hertog, B.M. Nicola (Eds.)
    • Verdenius F. The power and pitfalls of inductive modelling. Food Process Modelling 2001, Woodhead Publishing Limited. L.M.M. Tijskens, M.L.A.T.M. Hertog, B.M. Nicola (Eds.).
    • (2001) Food Process Modelling
    • Verdenius, F.1
  • 193
    • 34249780373 scopus 로고    scopus 로고
    • The linkage between cell wall metabolism and fruit softening: looking to the future
    • Vicente A.R., Saladie M., Rose J.K.C., Labavitch J.M. The linkage between cell wall metabolism and fruit softening: looking to the future. J. Sci. Food Agric. 2007, 87:1435-1448.
    • (2007) J. Sci. Food Agric. , vol.87 , pp. 1435-1448
    • Vicente, A.R.1    Saladie, M.2    Rose, J.K.C.3    Labavitch, J.M.4
  • 194
    • 23744491797 scopus 로고    scopus 로고
    • Volatile metabolites from the headspace of onion bulbs inoculated with postharvest pathogens as a tool for disease discrimination
    • Vikram A., Hamzehzarghani H., Kushalappa A. Volatile metabolites from the headspace of onion bulbs inoculated with postharvest pathogens as a tool for disease discrimination. Can. J. Plant Pathol. 2005, 27:194-203.
    • (2005) Can. J. Plant Pathol. , vol.27 , pp. 194-203
    • Vikram, A.1    Hamzehzarghani, H.2    Kushalappa, A.3
  • 195
    • 33644776871 scopus 로고    scopus 로고
    • Metabolic fingerprinting to discriminate diseases of stored carrots
    • Vikram A., Lui L., Hossain A., Kushalappa A. Metabolic fingerprinting to discriminate diseases of stored carrots. Ann. Appl. Biol. 2006, 148:17-26.
    • (2006) Ann. Appl. Biol. , vol.148 , pp. 17-26
    • Vikram, A.1    Lui, L.2    Hossain, A.3    Kushalappa, A.4
  • 196
    • 4043051555 scopus 로고    scopus 로고
    • Volatile metabolite profiling to discriminate diseases of McIntosh apple inoculated with fungal pathogens
    • Vikram A., Prithiviraj B., Hamzehzarghani H., Kushalappa A. Volatile metabolite profiling to discriminate diseases of McIntosh apple inoculated with fungal pathogens. J. Sci. Food Agric. 2004, 84:1333-1340.
    • (2004) J. Sci. Food Agric. , vol.84 , pp. 1333-1340
    • Vikram, A.1    Prithiviraj, B.2    Hamzehzarghani, H.3    Kushalappa, A.4
  • 197
    • 12144260434 scopus 로고    scopus 로고
    • Use of volatile metabolite profiles to discriminate fungal diseases of Cortland and Empire apples
    • Vikram A., Prithiviraj B., Kushalappa A. Use of volatile metabolite profiles to discriminate fungal diseases of Cortland and Empire apples. J. Plant Pathol. 2004, 86:215-225.
    • (2004) J. Plant Pathol. , vol.86 , pp. 215-225
    • Vikram, A.1    Prithiviraj, B.2    Kushalappa, A.3
  • 199
    • 5044227742 scopus 로고    scopus 로고
    • The evolution of molecular biology into systems biology
    • Westerhoff H., Palsson B. The evolution of molecular biology into systems biology. Nat. Biotechnol. 2004, 22:1249-1252.
    • (2004) Nat. Biotechnol. , vol.22 , pp. 1249-1252
    • Westerhoff, H.1    Palsson, B.2
  • 200
    • 34250658998 scopus 로고    scopus 로고
    • Bayesian methods in bioinformatics and computational systems biology
    • Wilkinson D.J. Bayesian methods in bioinformatics and computational systems biology. Brief Bioinform. 2007, 8:109-116.
    • (2007) Brief Bioinform. , vol.8 , pp. 109-116
    • Wilkinson, D.J.1
  • 201
    • 34547100043 scopus 로고    scopus 로고
    • Defining systems biology: an engineering perspective
    • Wolkenhauer O. Defining systems biology: an engineering perspective. IET Syst. Biol. 2007, 1:204-206.
    • (2007) IET Syst. Biol. , vol.1 , pp. 204-206
    • Wolkenhauer, O.1
  • 202
    • 14844317354 scopus 로고    scopus 로고
    • The dynamic systems approach to control and regulation of intracellular networks
    • Wolkenhauer O., Ullah M., Wellstead P., Cho K. The dynamic systems approach to control and regulation of intracellular networks. FEBS Lett. 2005, 579:1846-1853.
    • (2005) FEBS Lett. , vol.579 , pp. 1846-1853
    • Wolkenhauer, O.1    Ullah, M.2    Wellstead, P.3    Cho, K.4
  • 203
    • 67849106535 scopus 로고    scopus 로고
    • MetaboAnalyst: a web server for metabolomic data analysis and interpretation
    • Xia J.G., Psychogios N., Young N., Wishart D.S. MetaboAnalyst: a web server for metabolomic data analysis and interpretation. Nucleic Acids Res. 2009, 37:W652-W660.
    • (2009) Nucleic Acids Res. , vol.37
    • Xia, J.G.1    Psychogios, N.2    Young, N.3    Wishart, D.S.4
  • 204
    • 52049114430 scopus 로고    scopus 로고
    • Reducing oxidative stress in sweet cherry fruit by Pichia membranaefaciens: a possible mode of action against Penicillium expansum
    • Xu X.B., Tian S.P. Reducing oxidative stress in sweet cherry fruit by Pichia membranaefaciens: a possible mode of action against Penicillium expansum. J. Appl. Microbiol. 2008, 105:1170-1177.
    • (2008) J. Appl. Microbiol. , vol.105 , pp. 1170-1177
    • Xu, X.B.1    Tian, S.P.2
  • 205
    • 48249136116 scopus 로고    scopus 로고
    • Applying modelling experiences from the past to shape crop systems biology: the need to converge crop physiology and functional genomics
    • Yin X., Struik P.C. Applying modelling experiences from the past to shape crop systems biology: the need to converge crop physiology and functional genomics. New Phytol. 2008, 179:629-642.
    • (2008) New Phytol. , vol.179 , pp. 629-642
    • Yin, X.1    Struik, P.C.2
  • 206
    • 77954299994 scopus 로고    scopus 로고
    • Kiwifruit EIL and ERF genes involved in regulating fruit ripening
    • Yin X.R., Allan A.C., Chen K.S., Ferguson I.B. Kiwifruit EIL and ERF genes involved in regulating fruit ripening. Plant Physiol. 2010, 153:1280-1292.
    • (2010) Plant Physiol. , vol.153 , pp. 1280-1292
    • Yin, X.R.1    Allan, A.C.2    Chen, K.S.3    Ferguson, I.B.4
  • 208
    • 44949217543 scopus 로고    scopus 로고
    • Ethylene-induced modulation of genes associated with the ethylene signalling pathway in ripening kiwifruit
    • Yin X.R., Chen K.S., Allan A.C., Wu R.M., Zhang B., Lallu N., Ferguson I.B. Ethylene-induced modulation of genes associated with the ethylene signalling pathway in ripening kiwifruit. J. Exp. Bot. 2008, 59:2097-2108.
    • (2008) J. Exp. Bot. , vol.59 , pp. 2097-2108
    • Yin, X.R.1    Chen, K.S.2    Allan, A.C.3    Wu, R.M.4    Zhang, B.5    Lallu, N.6    Ferguson, I.B.7
  • 209
    • 14644425712 scopus 로고    scopus 로고
    • Toward computational systems biology
    • You L. Toward computational systems biology. Cell Biochem. Biophys. 2004, 40:167-184.
    • (2004) Cell Biochem. Biophys. , vol.40 , pp. 167-184
    • You, L.1
  • 211
    • 77949485574 scopus 로고    scopus 로고
    • Comparative proteomics analysis of differentially accumulated proteins in juice sacs of ponkan (Citrus reticulata) fruit during postharvest cold storage
    • Yun Z., Li W.Y., Pan Z.Y., Xu J., Cheng Y.J., Deng X.X. Comparative proteomics analysis of differentially accumulated proteins in juice sacs of ponkan (Citrus reticulata) fruit during postharvest cold storage. Postharvest Biol. Technol. 2010, 56:189-201.
    • (2010) Postharvest Biol. Technol. , vol.56 , pp. 189-201
    • Yun, Z.1    Li, W.Y.2    Pan, Z.Y.3    Xu, J.4    Cheng, Y.J.5    Deng, X.X.6
  • 212
    • 66249110327 scopus 로고    scopus 로고
    • Metabolic characterization of loci affecting sensory attributes in tomato allows an assessment of the influence of the levels of primary metabolites and volatile organic contents
    • Zanor M.I., Rambla J.L., Chaib J., Steppa A., Medina A., Granell A., Fernie A.R., Causse M. Metabolic characterization of loci affecting sensory attributes in tomato allows an assessment of the influence of the levels of primary metabolites and volatile organic contents. J. Exp. Bot. 2009, 60:2139-2154.
    • (2009) J. Exp. Bot. , vol.60 , pp. 2139-2154
    • Zanor, M.I.1    Rambla, J.L.2    Chaib, J.3    Steppa, A.4    Medina, A.5    Granell, A.6    Fernie, A.R.7    Causse, M.8
  • 214
    • 64549088436 scopus 로고    scopus 로고
    • Lipoxygenase gene expression in ripening kiwifruit in relation to ethylene and aroma production
    • Zhang B., Yin X.R., Li X., Yang S.L., Ferguson I.B., Chen K.S. Lipoxygenase gene expression in ripening kiwifruit in relation to ethylene and aroma production. J. Agric. Food Chem. 2009, 57:2875-2881.
    • (2009) J. Agric. Food Chem. , vol.57 , pp. 2875-2881
    • Zhang, B.1    Yin, X.R.2    Li, X.3    Yang, S.L.4    Ferguson, I.B.5    Chen, K.S.6
  • 215
    • 49449096728 scopus 로고    scopus 로고
    • Grape berry plasma membrane proteome analysis and its differential expression during ripening
    • Zhang J., Ma H., Feng J., Zeng L., Wang Z., Chen S. Grape berry plasma membrane proteome analysis and its differential expression during ripening. J. Exp. Bot. 2008, 59:2979-2990.
    • (2008) J. Exp. Bot. , vol.59 , pp. 2979-2990
    • Zhang, J.1    Ma, H.2    Feng, J.3    Zeng, L.4    Wang, Z.5    Chen, S.6
  • 216
    • 77953621468 scopus 로고    scopus 로고
    • Crucial roles of membrane stability and its related proteins in the tolerance of peach fruit to chilling injury
    • Zhang C.F., Ding Z.S., Xu X.B., Wang Q., Qin G.Z., Tian S.P. Crucial roles of membrane stability and its related proteins in the tolerance of peach fruit to chilling injury. Amino Acids 2010, 39:181-194.
    • (2010) Amino Acids , vol.39 , pp. 181-194
    • Zhang, C.F.1    Ding, Z.S.2    Xu, X.B.3    Wang, Q.4    Qin, G.Z.5    Tian, S.P.6
  • 217
    • 46849103855 scopus 로고    scopus 로고
    • Transcriptome profiling of ripening nectarine (Prunus persica L., Batsch) fruit treated with 1-MCP
    • Ziliotto F., Begheldo M., Rasori A., Bonghi C., Tonutti P. Transcriptome profiling of ripening nectarine (Prunus persica L., Batsch) fruit treated with 1-MCP. J. Exp. Bot. 2008, 59:2781-2791.
    • (2008) J. Exp. Bot. , vol.59 , pp. 2781-2791
    • Ziliotto, F.1    Begheldo, M.2    Rasori, A.3    Bonghi, C.4    Tonutti, P.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.