-
1
-
-
84930199213
-
Biosynthesis of terpenoid natural products in fungi
-
Schmidt-Dannert C. 2015. Biosynthesis of terpenoid natural products in fungi. Adv Biochem Eng Biotechnol 148:19-61. https://doi.org/10.1007/10_2014_283
-
(2015)
Adv Biochem Eng Biotechnol
, vol.148
, pp. 19-61
-
-
Schmidt-Dannert, C.1
-
2
-
-
0035046839
-
Bioactive sesquiterpenes produced by fungi-are they useful for humans as well?
-
Abraham WR. 2001. Bioactive sesquiterpenes produced by fungi-are they useful for humans as well? Curr Med Chem 8:583-606. https://doi.org/10.2174/0929867013373147
-
(2001)
Curr Med Chem
, vol.8
, pp. 583-606
-
-
Abraham, W.R.1
-
3
-
-
84867089852
-
Submerged cultivation of medicinal mushrooms: bioprocesses and products (review)
-
Elisashvili V. 2012. Submerged cultivation of medicinal mushrooms: bioprocesses and products (review). Int J Med Mushrooms 14:211-239. https://doi.org/10.1615/IntJMedMushr.v14.i3.10
-
(2012)
Int J Med Mushrooms
, vol.14
, pp. 211-239
-
-
Elisashvili, V.1
-
4
-
-
84898040966
-
Fungal metabolites with anticancer activity
-
Evidente A, Kornienko A, Cimmino A, Andolfi A, Lefranc F, Mathieu V, Kiss R. 2014. Fungal metabolites with anticancer activity. Nat Prod Rep 31:617-627. https://doi.org/10.1039/C3NP70078J
-
(2014)
Nat Prod Rep
, vol.31
, pp. 617-627
-
-
Evidente, A.1
Kornienko, A.2
Cimmino, A.3
Andolfi, A.4
Lefranc, F.5
Mathieu, V.6
Kiss, R.7
-
5
-
-
34250379220
-
Fungal genetics, genomics, and secondary metabolites in pharmaceutical sciences
-
Misiek M, Hoffmeister D. 2007. Fungal genetics, genomics, and secondary metabolites in pharmaceutical sciences. Planta Med 73:103-115. https://doi.org/10.1055/s-2007-967104
-
(2007)
Planta Med
, vol.73
, pp. 103-115
-
-
Misiek, M.1
Hoffmeister, D.2
-
6
-
-
77957329119
-
Isoprenoid pathway optimization for Taxol precursor overproduction in Escherichia coli
-
Ajikumar PK, Xiao WH, Tyo KE, Wang Y, Simeon F, Leonard E, Mucha O, Phon TH, Pfeifer B, Stephanopoulos G. 2010. Isoprenoid pathway optimization for Taxol precursor overproduction in Escherichia coli. Science 330:70-74. https://doi.org/10.1126/science.1191652
-
(2010)
Science
, vol.330
, pp. 70-74
-
-
Ajikumar, P.K.1
Xiao, W.H.2
Tyo, K.E.3
Wang, Y.4
Simeon, F.5
Leonard, E.6
Mucha, O.7
Phon, T.H.8
Pfeifer, B.9
Stephanopoulos, G.10
-
7
-
-
84871486514
-
Molecular diversity sculpted by fungal PKS-NRPS hybrids
-
Boettger D, Hertweck C. 2013. Molecular diversity sculpted by fungal PKS-NRPS hybrids. Chembiochem 14:28-42. https://doi.org/10.1002/cbic.201200624
-
(2013)
Chembiochem
, vol.14
, pp. 28-42
-
-
Boettger, D.1
Hertweck, C.2
-
8
-
-
84875749007
-
The fumagillin biosynthetic gene cluster in Aspergillus fumigatus encodes a cryptic terpene cyclase involved in the formation of β-trans-bergamotene
-
Lin HC, Chooi YH, Dhingra S, Xu W, Calvo AM, Tang Y. 2013. The fumagillin biosynthetic gene cluster in Aspergillus fumigatus encodes a cryptic terpene cyclase involved in the formation of β-trans-bergamotene. J Am Chem Soc 135:4616-4619. https://doi.org/10.1021/ja312503y
-
(2013)
J Am Chem Soc
, vol.135
, pp. 4616-4619
-
-
Lin, H.C.1
Chooi, Y.H.2
Dhingra, S.3
Xu, W.4
Calvo, A.M.5
Tang, Y.6
-
9
-
-
84896537089
-
Generation of complexity in fungal terpene biosynthesis: discovery of a multifunctional cytochrome P450 in the fumagillin pathway
-
Lin HC, Tsunematsu Y, Dhingra S, Xu W, Fukutomi M, Chooi YH, Cane DE, Calvo AM, Watanabe K, Tang Y. 2014. Generation of complexity in fungal terpene biosynthesis: discovery of a multifunctional cytochrome P450 in the fumagillin pathway. J Am Chem Soc 136:4426-4436. https://doi.org/10.1021/ja500881e
-
(2014)
J Am Chem Soc
, vol.136
, pp. 4426-4436
-
-
Lin, H.C.1
Tsunematsu, Y.2
Dhingra, S.3
Xu, W.4
Fukutomi, M.5
Chooi, Y.H.6
Cane, D.E.7
Calvo, A.M.8
Watanabe, K.9
Tang, Y.10
-
10
-
-
84876784070
-
High-level semi-synthetic production of the potent antimalarial artemisinin
-
Paddon CJ, Westfall PJ, Pitera DJ, Benjamin K, Fisher K, McPhee D, Leavell MD, Tai A, Main A, Eng D. Polichuk DR, Teoh KH, Reed DW, Treynor T, Lenihan J, Fleck M, Bajad S, Dang G, Dengrove D, Diola D, Dorin G, Ellens KW, Fickes S, Galazzo J, Gaucher SP, Geistlinger T, Henry R, Hepp M, Horning T, Iqbal T, Jiang H, Kizer L, Lieu B, Melis D, Moss N, Regentin R, Secrest S, Tsuruta H, Vazquez R, Westblade LF, Xu L, Yu M, Zhang Y, Zhao L, Lievense J, Covello PS, Keasling JD, Reiling KK, Renninger NS, Newman JD. 2013. High-level semi-synthetic production of the potent antimalarial artemisinin. Nature 496:528-532. https://doi.org/10.1038/nature12051
-
(2013)
Nature
, vol.496
, pp. 528-532
-
-
Paddon, C.J.1
Westfall, P.J.2
Pitera, D.J.3
Benjamin, K.4
Fisher, K.5
McPhee, D.6
Leavell, M.D.7
Tai, A.8
Main, A.9
Eng, D.10
Polichuk, D.R.11
Teoh, K.H.12
Reed, D.W.13
Treynor, T.14
Lenihan, J.15
Fleck, M.16
Bajad, S.17
Dang, G.18
Dengrove, D.19
Diola, D.20
Dorin, G.21
Ellens, K.W.22
Fickes, S.23
Galazzo, J.24
Gaucher, S.P.25
Geistlinger, T.26
Henry, R.27
Hepp, M.28
Horning, T.29
Iqbal, T.30
Jiang, H.31
Kizer, L.32
Lieu, B.33
Melis, D.34
Moss, N.35
Regentin, R.36
Secrest, S.37
Tsuruta, H.38
Vazquez, R.39
Westblade, L.F.40
Xu, L.41
Yu, M.42
Zhang, Y.43
Zhao, L.44
Lievense, J.45
Covello, P.S.46
Keasling, J.D.47
Reiling, K.K.48
Renninger, N.S.49
Newman, J.D.50
more..
-
11
-
-
84889779670
-
Yeast-based genome mining, production and mechanistic studies of the biosynthesis of fungal polyketide and peptide natural products
-
Tsunematsu Y, Ishiuchi K, Hotta K, Watanabe K. 2013. Yeast-based genome mining, production and mechanistic studies of the biosynthesis of fungal polyketide and peptide natural products. Nat Prod Rep 30: 1139-1149. https://doi.org/10.1039/c3np70037b
-
(2013)
Nat Prod Rep
, vol.30
, pp. 1139-1149
-
-
Tsunematsu, Y.1
Ishiuchi, K.2
Hotta, K.3
Watanabe, K.4
-
12
-
-
84866494995
-
Discovery and characterization of terpenoid biosynthetic pathways of fungi
-
Wawrzyn GT, Bloch SE, Schmidt-Dannert C. 2012. Discovery and characterization of terpenoid biosynthetic pathways of fungi. Methods Enzymol 515:83-105. https://doi.org/10.1016/B978-0-12-394290-6.00005-7
-
(2012)
Methods Enzymol
, vol.515
, pp. 83-105
-
-
Wawrzyn, G.T.1
Bloch, S.E.2
Schmidt-Dannert, C.3
-
13
-
-
84885755731
-
Prototype of an intertwined secondary-metabolite supercluster
-
Wiemann P, Guo CJ, Palmer JM, Sekonyela R, Wang CC, Keller NP. 2013. Prototype of an intertwined secondary-metabolite supercluster. Proc Natl Acad Sci U S A 110:17065-17070. https://doi.org/10.1073/pnas.1313258110
-
(2013)
Proc Natl Acad Sci U S A
, vol.110
, pp. 17065-17070
-
-
Wiemann, P.1
Guo, C.J.2
Palmer, J.M.3
Sekonyela, R.4
Wang, C.C.5
Keller, N.P.6
-
14
-
-
84895075667
-
Strategies for mining fungal natural products
-
Wiemann P, Keller NP. 2014. Strategies for mining fungal natural products. J Ind Microbiol Biotechnol 41:301-313. https://doi.org/10.1007/s10295-013-1366-3
-
(2014)
J Ind Microbiol Biotechnol
, vol.41
, pp. 301-313
-
-
Wiemann, P.1
Keller, N.P.2
-
15
-
-
84895107216
-
Recent advances in genome mining of secondary metabolite biosynthetic gene clusters and the development of heterologous expression systems in Aspergillus nidulans
-
Yaegashi J, Oakley BR, Wang CC. 2014. Recent advances in genome mining of secondary metabolite biosynthetic gene clusters and the development of heterologous expression systems in Aspergillus nidulans. J Ind Microbiol Biotechnol 41:433-442. https://doi.org/10.1007/s10295-013-1386-z
-
(2014)
J Ind Microbiol Biotechnol
, vol.41
, pp. 433-442
-
-
Yaegashi, J.1
Oakley, B.R.2
Wang, C.C.3
-
16
-
-
84929951357
-
Biosynthesis of hydrocarbons and volatile organic compounds by fungi: bioengineering potential
-
Spakowicz DJ, Strobel SA. 2015. Biosynthesis of hydrocarbons and volatile organic compounds by fungi: bioengineering potential. Appl Microbiol Biotechnol 99:4943-4951. https://doi.org/10.1007/s00253-015-6641-y
-
(2015)
Appl Microbiol Biotechnol
, vol.99
, pp. 4943-4951
-
-
Spakowicz, D.J.1
Strobel, S.A.2
-
17
-
-
65949116381
-
Diversity of sesquiterpene synthases in the basidiomycete Coprinus cinereus
-
Agger S, Lopez-Gallego F, Schmidt-Dannert C. 2009. Diversity of sesquiterpene synthases in the basidiomycete Coprinus cinereus. Mol Microbiol 72:1181-1195. https://doi.org/10.1111/j.1365-2958.2009.06717.x
-
(2009)
Mol Microbiol
, vol.72
, pp. 1181-1195
-
-
Agger, S.1
Lopez-Gallego, F.2
Schmidt-Dannert, C.3
-
18
-
-
84862732885
-
Draft genome of Omphalotus olearius provides a predictive framework for sesquiterpenoid natural product biosynthesis in Basidiomycota
-
Wawrzyn GT, Quin MB, Choudhary S, Lopez-Gallego F, Schmidt-Dannert C. 2012. Draft genome of Omphalotus olearius provides a predictive framework for sesquiterpenoid natural product biosynthesis in Basidiomycota. Chem Biol 19:772-783. https://doi.org/10.1016/j.chembiol.2012.05.012
-
(2012)
Chem Biol
, vol.19
, pp. 772-783
-
-
Wawrzyn, G.T.1
Quin, M.B.2
Choudhary, S.3
Lopez-Gallego, F.4
Schmidt-Dannert, C.5
-
19
-
-
84890120984
-
Mushroom hunting by using bioinformatics: application of a predictive framework facilitates the selective identification of sesquiterpene synthases in Basidiomycota
-
Quin MB, Flynn CM, Wawrzyn GT, Choudhary S, Schmidt-Dannert C. 2013. Mushroom hunting by using bioinformatics: application of a predictive framework facilitates the selective identification of sesquiterpene synthases in Basidiomycota. Chembiochem 14:2480-2491. https://doi.org/10.1002/cbic.201300349
-
(2013)
Chembiochem
, vol.14
, pp. 2480-2491
-
-
Quin, M.B.1
Flynn, C.M.2
Wawrzyn, G.T.3
Choudhary, S.4
Schmidt-Dannert, C.5
-
21
-
-
0014167309
-
The structure and chemistry of hirsutic acid
-
Comer FW, McCapra F, Qureshi IH, Scott AI. 1967. The structure and chemistry of hirsutic acid. Tetrahedron 23:4761-4768. https://doi.org/10.1016/S0040-4020(01)92573-6
-
(1967)
Tetrahedron
, vol.23
, pp. 4761-4768
-
-
Comer, F.W.1
McCapra, F.2
Qureshi, I.H.3
Scott, A.I.4
-
22
-
-
33645794521
-
Hirsutenols D, E and F, new sesquiterpenes from the culture broth of Stereum hirsutum
-
Yoo NH, Kim JP, Yun BS, Ryoo IJ, Lee IK, Yoon ES, Koshino H, Yoo ID. 2006. Hirsutenols D, E and F, new sesquiterpenes from the culture broth of Stereum hirsutum. J Antibiot (Tokyo) 59:110-113. https://doi.org/10.1038/ja.2006.16
-
(2006)
J Antibiot (Tokyo)
, vol.59
, pp. 110-113
-
-
Yoo, N.H.1
Kim, J.P.2
Yun, B.S.3
Ryoo, I.J.4
Lee, I.K.5
Yoon, E.S.6
Koshino, H.7
Yoo, I.D.8
-
23
-
-
0036109192
-
New tricyclic sesquiterpenes from the fermentation broth of Stereum hirsutum
-
Yun BS, Lee IK, Cho Y, Cho SM, Yoo ID. 2002. New tricyclic sesquiterpenes from the fermentation broth of Stereum hirsutum. J Nat Prod 65: 786-788. https://doi.org/10.1021/np010602b
-
(2002)
J Nat Prod
, vol.65
, pp. 786-788
-
-
Yun, B.S.1
Lee, I.K.2
Cho, Y.3
Cho, S.M.4
Yoo, I.D.5
-
24
-
-
34247537822
-
Biosynthesis of hirsutic acid C using 13C nuclear magnetic resonance spectroscopy
-
Feline TC, Mellows G, Jones RB, Phillips L. 1974. Biosynthesis of hirsutic acid C using 13C nuclear magnetic resonance spectroscopy. J Chem Soc Chem Commun 2:63-64. https://doi.org/10.1039/c39740000063
-
(1974)
J Chem Soc Chem Commun
, vol.2
, pp. 63-64
-
-
Feline, T.C.1
Mellows, G.2
Jones, R.B.3
Phillips, L.4
-
25
-
-
84862977387
-
The Paleozoic origin of enzymatic lignin decomposition reconstructed from 31 fungal genomes
-
Floudas D, Binder M, Riley R, Barry K, Blanchette RA, Henrissat B, Martinez AT, Otillar R, Spatafora JW, Yadav JS, Aerts A, Benoit I, Boyd A, Carlson A, Copeland A, Coutinho PM, de Vries RP, Ferreira P, Findley K, Foster B, Gaskell J, Glotzer D, Gorecki P, Heitman J, Hesse C, Hori C, Igarashi K, Jurgens JA, Kallen N, Kersten P, Kohler A, Kues U, Kumar TK, Kuo A, LaButti K, Larrondo LF, Lindquist E, Ling A, Lombard V, Lucas S, Lundell T, Martin R, McLaughlin DJ, Morgenstern I, Morin E, Murat C, Nagy LG, Nolan M, Ohm RA, Patyshakuliyeva A, et al. 2012. The Paleozoic origin of enzymatic lignin decomposition reconstructed from 31 fungal genomes. Science 336:1715-1719. https://doi.org/10.1126/science.1221748
-
(2012)
Science
, vol.336
, pp. 1715-1719
-
-
Floudas, D.1
Binder, M.2
Riley, R.3
Barry, K.4
Blanchette, R.A.5
Henrissat, B.6
Martinez, A.T.7
Otillar, R.8
Spatafora, J.W.9
Yadav, J.S.10
Aerts, A.11
Benoit, I.12
Boyd, A.13
Carlson, A.14
Copeland, A.15
Coutinho, P.M.16
de Vries, R.P.17
Ferreira, P.18
Findley, K.19
Foster, B.20
Gaskell, J.21
Glotzer, D.22
Gorecki, P.23
Heitman, J.24
Hesse, C.25
Hori, C.26
Igarashi, K.27
Jurgens, J.A.28
Kallen, N.29
Kersten, P.30
Kohler, A.31
Kues, U.32
Kumar, T.K.33
Kuo, A.34
LaButti, K.35
Larrondo, L.F.36
Lindquist, E.37
Ling, A.38
Lombard, V.39
Lucas, S.40
Lundell, T.41
Martin, R.42
McLaughlin, D.J.43
Morgenstern, I.44
Morin, E.45
Murat, C.46
Nagy, L.G.47
Nolan, M.48
Ohm, R.A.49
Patyshakuliyeva, A.50
more..
-
26
-
-
84891752209
-
MycoCosm portal: gearing up for 1000 fungal genomes
-
Grigoriev IV, Nikitin R, Haridas S, Kuo A, Ohm R, Otillar R, Riley R, Salamov A, Zhao XL, Korzeniewski F, Smirnova T, Nordberg H, Dubchak I, Shabalov I. 2014. MycoCosm portal: gearing up for 1000 fungal genomes. Nucleic Acids Res 42:D699-D704. https://doi.org/10.1093/nar/gkt1183
-
(2014)
Nucleic Acids Res
, vol.42
, pp. D699-D704
-
-
Grigoriev, I.V.1
Nikitin, R.2
Haridas, S.3
Kuo, A.4
Ohm, R.5
Otillar, R.6
Riley, R.7
Salamov, A.8
Zhao, X.L.9
Korzeniewski, F.10
Smirnova, T.11
Nordberg, H.12
Dubchak, I.13
Shabalov, I.14
-
27
-
-
84883578432
-
WebAUGUSTUS-a web service for training AUGUSTUS and predicting genes in eukaryotes
-
Hoff KJ, Stanke M. 2013. WebAUGUSTUS-a web service for training AUGUSTUS and predicting genes in eukaryotes. Nucleic Acids Res 41: W123-W128. https://doi.org/10.1093/nar/gkt418
-
(2013)
Nucleic Acids Res
, vol.41
, pp. W123-W128
-
-
Hoff, K.J.1
Stanke, M.2
-
28
-
-
0035923697
-
Structure of trichodiene synthase from Fusarium sporotrichioides provides mechanistic inferences on the terpene cyclization cascade
-
Rynkiewicz MJ, Cane DE, Christianson DW. 2001. Structure of trichodiene synthase from Fusarium sporotrichioides provides mechanistic inferences on the terpene cyclization cascade. Proc Natl Acad Sci U S A 98: 13543-13548. https://doi.org/10.1073/pnas.231313098
-
(2001)
Proc Natl Acad Sci U S A
, vol.98
, pp. 13543-13548
-
-
Rynkiewicz, M.J.1
Cane, D.E.2
Christianson, D.W.3
-
29
-
-
84874534961
-
Gene make-up: rapid and massive intron gains after horizontal transfer of a bacterial alpha-amylase gene to Basidiomycetes
-
Da Lage J-L, Binder M, Hua-Van A, Janecek S, Casane D. 2013. Gene make-up: rapid and massive intron gains after horizontal transfer of a bacterial alpha-amylase gene to Basidiomycetes. BMC Evol Biol 13:40. https://doi.org/10.1186/1471-2148-13-40
-
(2013)
BMC Evol Biol
, vol.13
, pp. 40
-
-
Da Lage, J.-L.1
Binder, M.2
Hua-Van, A.3
Janecek, S.4
Casane, D.5
-
30
-
-
84952682812
-
Bacterial terpene cyclases
-
Dickschat JS. 2016. Bacterial terpene cyclases. Nat Prod Rep 33:87-110. https://doi.org/10.1039/C5NP00102A
-
(2016)
Nat Prod Rep
, vol.33
, pp. 87-110
-
-
Dickschat, J.S.1
-
31
-
-
0030777210
-
Crystal structure of pentalenene synthase: mechanistic insights on terpenoid cyclization reactions in biology
-
Lesburg CA, Zhai G, Cane DE, Christianson DW. 1997. Crystal structure of pentalenene synthase: mechanistic insights on terpenoid cyclization reactions in biology. Science 277:1820-1824. https://doi.org/10.1126/science.277.5333.1820
-
(1997)
Science
, vol.277
, pp. 1820-1824
-
-
Lesburg, C.A.1
Zhai, G.2
Cane, D.E.3
Christianson, D.W.4
-
32
-
-
80051505723
-
Characterization of a novel sesquiterpene cyclase involved in (+)-caryolan-1-ol biosynthesis in Streptomyces griseus
-
Nakano C, Horinouchi S, Ohnishi Y. 2011. Characterization of a novel sesquiterpene cyclase involved in (+)-caryolan-1-ol biosynthesis in Streptomyces griseus. J Biol Chem 286:27980-27987. https://doi.org/10.1074/jbc.M111.265652
-
(2011)
J Biol Chem
, vol.286
, pp. 27980-27987
-
-
Nakano, C.1
Horinouchi, S.2
Ohnishi, Y.3
-
33
-
-
84933504076
-
Novel terpenes generated by heterologous expression of bacterial terpene synthase genes in an engineered Streptomyces host
-
Yamada Y, Arima S, Nagamitsu T, Johmoto K, Uekusa H, Eguchi T, Shin-ya K, Cane DE, Ikeda H. 2015. Novel terpenes generated by heterologous expression of bacterial terpene synthase genes in an engineered Streptomyces host. J Antibiotics 68:385-394. https://doi.org/10.1038/ja.2014.171
-
(2015)
J Antibiotics
, vol.68
, pp. 385-394
-
-
Yamada, Y.1
Arima, S.2
Nagamitsu, T.3
Johmoto, K.4
Uekusa, H.5
Eguchi, T.6
Shin-ya, K.7
Cane, D.E.8
Ikeda, H.9
-
34
-
-
84921327913
-
Terpene synthases are widely distributed in bacteria
-
Yamada Y, Kuzuyama T, Komatsu M, Shin-ya K, Omura S, Cane DE, Ikeda H. 2015. Terpene synthases are widely distributed in bacteria. Proc Natl Acad Sci U S A 112:857-862. https://doi.org/10.1073/pnas.1422108112
-
(2015)
Proc Natl Acad Sci U S A
, vol.112
, pp. 857-862
-
-
Yamada, Y.1
Kuzuyama, T.2
Komatsu, M.3
Shin-ya, K.4
Omura, S.5
Cane, D.E.6
Ikeda, H.7
-
35
-
-
33646512641
-
Genome mining in Streptomyces coelicolor: molecular cloning and characterization of a new sesquiterpene synthase
-
Lin X, Hopson R, Cane DE. 2006. Genome mining in Streptomyces coelicolor: molecular cloning and characterization of a new sesquiterpene synthase. J Am Chem Soc 128:6022-6023. https://doi.org/10.1021/ja061292s
-
(2006)
J Am Chem Soc
, vol.128
, pp. 6022-6023
-
-
Lin, X.1
Hopson, R.2
Cane, D.E.3
-
36
-
-
84870323745
-
Identification of the SGR6065 gene product as a sesquiterpene cyclase involved in (+)-epicubenol biosynthesis in Streptomyces griseus
-
Nakano C, Tezuka T, Horinouchi S, Ohnishi Y. 2012. Identification of the SGR6065 gene product as a sesquiterpene cyclase involved in (+)-epicubenol biosynthesis in Streptomyces griseus. J Antibiot (Tokyo) 65: 551-558. https://doi.org/10.1038/ja.2012.68
-
(2012)
J Antibiot (Tokyo)
, vol.65
, pp. 551-558
-
-
Nakano, C.1
Tezuka, T.2
Horinouchi, S.3
Ohnishi, Y.4
-
37
-
-
77954303579
-
Genome mining in Streptomyces avermitilis: cloning and characterization of SAV_76, the synthase for a new sesquiterpene, avermitilol
-
Chou WK, Fanizza I, Uchiyama T, Komatsu M, Ikeda H, Cane DE. 2010. Genome mining in Streptomyces avermitilis: cloning and characterization of SAV_76, the synthase for a new sesquiterpene, avermitilol. J Am Chem Soc 132:8850-8851. https://doi.org/10.1021/ja103087w
-
(2010)
J Am Chem Soc
, vol.132
, pp. 8850-8851
-
-
Chou, W.K.1
Fanizza, I.2
Uchiyama, T.3
Komatsu, M.4
Ikeda, H.5
Cane, D.E.6
-
38
-
-
82455208881
-
Optimized compatible set of BioBrick vectors for metabolic pathway engineering
-
Vick JE, Johnson ET, Choudhary S, Bloch SE, Lopez-Gallego F, Srivastava P, Tikh IB, Wawrzyn GT, Schmidt-Dannert C. 2011. Optimized compatible set of BioBrick vectors for metabolic pathway engineering. Appl Microbiol Biotechnol 92:1275-1286. https://doi.org/10.1007/s00253-011-3633-4
-
(2011)
Appl Microbiol Biotechnol
, vol.92
, pp. 1275-1286
-
-
Vick, J.E.1
Johnson, E.T.2
Choudhary, S.3
Bloch, S.E.4
Lopez-Gallego, F.5
Srivastava, P.6
Tikh, I.B.7
Wawrzyn, G.T.8
Schmidt-Dannert, C.9
-
39
-
-
21344460744
-
Molecular cloning of a new cDNA and expression of 3-hydroxy-3-methylglutaryl-CoA synthase gene from Hevea brasiliensis
-
Sirinupong N, Suwanmanee P, Doolittle RF, Suvachitanont W. 2005. Molecular cloning of a new cDNA and expression of 3-hydroxy-3-methylglutaryl-CoA synthase gene from Hevea brasiliensis. Planta 221: 502-512. https://doi.org/10.1007/s00425-004-1463-7
-
(2005)
Planta
, vol.221
, pp. 502-512
-
-
Sirinupong, N.1
Suwanmanee, P.2
Doolittle, R.F.3
Suvachitanont, W.4
-
40
-
-
77951923438
-
Crystal structures of human HMG-CoA synthase isoforms provide insights into inherited ketogenesis disorders and inhibitor design
-
Shafqat N, Turnbull A, Zschocke J, Oppermann U, Yue WW. 2010. Crystal structures of human HMG-CoA synthase isoforms provide insights into inherited ketogenesis disorders and inhibitor design. J Mol Biol 398: 497-506. https://doi.org/10.1016/j.jmb.2010.03.034
-
(2010)
J Mol Biol
, vol.398
, pp. 497-506
-
-
Shafqat, N.1
Turnbull, A.2
Zschocke, J.3
Oppermann, U.4
Yue, W.W.5
-
41
-
-
0027316345
-
Avian 3-hydroxy-3-methylglutaryl-CoA synthase. Characterization of a recombinant cholesterogenic isozyme and demonstration of the requirement for a sulfhydryl functionality in formation of the acetyl-enzyme reaction intermediate
-
Misra I, Narasimhan C, Miziorko HM. 1993. Avian 3-hydroxy-3-methylglutaryl-CoA synthase. Characterization of a recombinant cholesterogenic isozyme and demonstration of the requirement for a sulfhydryl functionality in formation of the acetyl-enzyme reaction intermediate. J Biol Chem 268:12129-12135
-
(1993)
J Biol Chem
, vol.268
, pp. 12129-12135
-
-
Misra, I.1
Narasimhan, C.2
Miziorko, H.M.3
-
42
-
-
79951471276
-
Astaxanthin biosynthesis is enhanced by high carotenogenic gene expression and decrease of fatty acids and ergosterol in a Phaffia rhodozyma mutant strain
-
Miao L, Chi S, Tang Y, Su Z, Yin T, Guan G, Li Y. 2011. Astaxanthin biosynthesis is enhanced by high carotenogenic gene expression and decrease of fatty acids and ergosterol in a Phaffia rhodozyma mutant strain. FEMS Yeast Res 11:192-201. https://doi.org/10.1111/j.1567-1364.2010.00705.x
-
(2011)
FEMS Yeast Res
, vol.11
, pp. 192-201
-
-
Miao, L.1
Chi, S.2
Tang, Y.3
Su, Z.4
Yin, T.5
Guan, G.6
Li, Y.7
-
43
-
-
84873570421
-
Molecular characterization and expression analysis of GlHMGS, a gene encoding hydroxymethylglutaryl-CoA synthase from Ganoderma lucidum (Ling-zhi) in ganoderic acid biosynthesis pathway
-
Ren A, Ouyang X, Shi L, Jiang A-L, Mu D-S, Li M-J, Han Q, Zhao M-W. 2013. Molecular characterization and expression analysis of GlHMGS, a gene encoding hydroxymethylglutaryl-CoA synthase from Ganoderma lucidum (Ling-zhi) in ganoderic acid biosynthesis pathway. World J Microbiol Biotechnol 29:523-531. https://doi.org/10.1007/s11274-012-1206-z
-
(2013)
World J Microbiol Biotechnol
, vol.29
, pp. 523-531
-
-
Ren, A.1
Ouyang, X.2
Shi, L.3
Jiang, A.-L.4
Mu, D.-S.5
Li, M.-J.6
Han, Q.7
Zhao, M.-W.8
-
44
-
-
77349109110
-
Elucidation of the complete ferrichrome A biosynthetic pathway in Ustilago maydis
-
Winterberg B, Uhlmann S, Linne U, Lessing F, Marahiel MA, Eichhorn H, Kahmann R, Schirawski J. 2010. Elucidation of the complete ferrichrome A biosynthetic pathway in Ustilago maydis. Mol Microbiol 75:1260-1271. https://doi.org/10.1111/j.1365-2958.2010.07048.x
-
(2010)
Mol Microbiol
, vol.75
, pp. 1260-1271
-
-
Winterberg, B.1
Uhlmann, S.2
Linne, U.3
Lessing, F.4
Marahiel, M.A.5
Eichhorn, H.6
Kahmann, R.7
Schirawski, J.8
-
45
-
-
0025120211
-
Regulation of the mevalonate pathway
-
Goldstein JL, Brown MS. 1990. Regulation of the mevalonate pathway. Nature 343:425-430. https://doi.org/10.1038/343425a0
-
(1990)
Nature
, vol.343
, pp. 425-430
-
-
Goldstein, J.L.1
Brown, M.S.2
-
46
-
-
79961118496
-
Regulation of HMG-CoA reductase in mammals and yeast
-
Burg JS, Espenshade PJ. 2011. Regulation of HMG-CoA reductase in mammals and yeast. Prog Lipid Res 50:403-410. https://doi.org/10.1016/j.plipres.2011.07.002
-
(2011)
Prog Lipid Res
, vol.50
, pp. 403-410
-
-
Burg, J.S.1
Espenshade, P.J.2
-
47
-
-
80555123167
-
Optimization of a heterologous mevalonate pathway through the use of variant HMG-CoA reductases
-
Ma SM, Garcia DE, Redding-Johanson AM, Friedland GD, Chan R, Batth TS, Haliburton JR, Chivian D, Keasling JD, Petzold CJ, Lee TS, Chhabra SR. 2011. Optimization of a heterologous mevalonate pathway through the use of variant HMG-CoA reductases. Metab Eng 13:588-597. https://doi.org/10.1016/j.ymben.2011.07.001
-
(2011)
Metab Eng
, vol.13
, pp. 588-597
-
-
Ma, S.M.1
Garcia, D.E.2
Redding-Johanson, A.M.3
Friedland, G.D.4
Chan, R.5
Batth, T.S.6
Haliburton, J.R.7
Chivian, D.8
Keasling, J.D.9
Petzold, C.J.10
Lee, T.S.11
Chhabra, S.R.12
-
48
-
-
84861229095
-
Volatile sesquiterpenes from fungi: what are they good for?
-
Kramer R, Abraham W-R. 2011. Volatile sesquiterpenes from fungi: what are they good for? Phytochem Rev 11:15-37. https://doi.org/10.1007/s11101-011-9216-2
-
(2011)
Phytochem Rev
, vol.11
, pp. 15-37
-
-
Kramer, R.1
Abraham, W.-R.2
-
49
-
-
84882319205
-
Natural sesquiterpenoids
-
Fraga BM. 2013. Natural sesquiterpenoids. Nat Prod Rep 30:1226-1264. https://doi.org/10.1039/c3np70047j
-
(2013)
Nat Prod Rep
, vol.30
, pp. 1226-1264
-
-
Fraga, B.M.1
-
50
-
-
77951875723
-
Hirsutane-type sesquiterpenes with uncommon modifications from three basidiomycetes
-
Liermann JC, Schuffler A, Wollinsky B, Birnbacher J, Kolshorn H, Anke T, Opatz T. 2010. Hirsutane-type sesquiterpenes with uncommon modifications from three basidiomycetes. J Org Chem 75:2955-2961. https://doi.org/10.1021/jo100202b
-
(2010)
J Org Chem
, vol.75
, pp. 2955-2961
-
-
Liermann, J.C.1
Schuffler, A.2
Wollinsky, B.3
Birnbacher, J.4
Kolshorn, H.5
Anke, T.6
Opatz, T.7
-
51
-
-
37249016359
-
The reacquisition of biotin prototrophy in Saccharomyces cerevisiae involved horizontal gene transfer, gene duplication and gene clustering
-
Hall C, Dietrich FS. 2007. The reacquisition of biotin prototrophy in Saccharomyces cerevisiae involved horizontal gene transfer, gene duplication and gene clustering. Genetics 177:2293-2307. https://doi.org/10.1534/genetics.107.074963
-
(2007)
Genetics
, vol.177
, pp. 2293-2307
-
-
Hall, C.1
Dietrich, F.S.2
-
52
-
-
84969540593
-
Genome of Diaporthe sp. provides insights into the potential inter-phylum transfer of a fungal sesquiterpenoid biosynthetic pathway
-
de Sena Filho JG, Quin MB, Spakowicz DJ, Shaw JJ, Kucera K, Dunican B, Strobel SA, Schmidt-Dannert C. 2016. Genome of Diaporthe sp. provides insights into the potential inter-phylum transfer of a fungal sesquiterpenoid biosynthetic pathway. Fungal Biol 120:1050-1063. https://doi.org/10.1016/j.funbio.2016.04.001
-
(2016)
Fungal Biol
, vol.120
, pp. 1050-1063
-
-
de Sena Filho, J.G.1
Quin, M.B.2
Spakowicz, D.J.3
Shaw, J.J.4
Kucera, K.5
Dunican, B.6
Strobel, S.A.7
Schmidt-Dannert, C.8
-
53
-
-
84928969455
-
Computational-guided discovery and characterization of a sesquiterpene synthase from Streptomyces clavuligerus
-
Chow J-Y, Tian B-X, Ramamoorthy G, Hillerich BS, Seidel RD, Almo SC, Jacobson MP, Poulter CD. 2015. Computational-guided discovery and characterization of a sesquiterpene synthase from Streptomyces clavuligerus. Proc Natl Acad Sci U S A 112:5661-5666. https://doi.org/10.1073/pnas.1505127112
-
(2015)
Proc Natl Acad Sci U S A
, vol.112
, pp. 5661-5666
-
-
Chow, J.-Y.1
Tian, B.-X.2
Ramamoorthy, G.3
Hillerich, B.S.4
Seidel, R.D.5
Almo, S.C.6
Jacobson, M.P.7
Poulter, C.D.8
-
54
-
-
85031726880
-
Fungal gene cluster diversity and evolution
-
Slot JC. 2017. Fungal gene cluster diversity and evolution. Adv Genet 100:141-178. https://doi.org/10.1016/bs.adgen.2017.09.005
-
(2017)
Adv Genet
, vol.100
, pp. 141-178
-
-
Slot, J.C.1
-
55
-
-
84958758479
-
Improving monoterpene geraniol production through geranyl diphosphate synthesis regulation in Saccharomyces cerevisiae
-
Zhao J, Bao X, Li C, Shen Y, Hou J. 2016. Improving monoterpene geraniol production through geranyl diphosphate synthesis regulation in Saccharomyces cerevisiae. Appl Microbiol Biotechnol 100:4561-4571. https://doi.org/10.1007/s00253-016-7375-1
-
(2016)
Appl Microbiol Biotechnol
, vol.100
, pp. 4561-4571
-
-
Zhao, J.1
Bao, X.2
Li, C.3
Shen, Y.4
Hou, J.5
-
56
-
-
84903475494
-
Microbial synthesis of pinene
-
Sarria S, Wong B, Garcia Martin H, Keasling JD, Peralta-Yahya P. 2014. Microbial synthesis of pinene. ACS Synth Biol 3:466-475. https://doi.org/10.1021/sb4001382
-
(2014)
ACS Synth Biol
, vol.3
, pp. 466-475
-
-
Sarria, S.1
Wong, B.2
Garcia Martin, H.3
Keasling, J.D.4
Peralta-Yahya, P.5
-
57
-
-
84900869235
-
Engineering monoterpene production in yeast using a synthetic dominant negative geranyl diphosphate synthase
-
Ignea C, Pontini M, Maffei ME, Makris AM, Kampranis SC. 2014. Engineering monoterpene production in yeast using a synthetic dominant negative geranyl diphosphate synthase. ACS Synth Biol 3:298-306. https://doi.org/10.1021/sb400115e
-
(2014)
ACS Synth Biol
, vol.3
, pp. 298-306
-
-
Ignea, C.1
Pontini, M.2
Maffei, M.E.3
Makris, A.M.4
Kampranis, S.C.5
-
58
-
-
84863116515
-
Modular pathway engineering of diterpenoid synthases and the mevalonic acid pathway for miltiradiene production
-
Zhou YJ, Gao W, Rong Q, Jin G, Chu H, Liu W, Yang W, Zhu Z, Li G, Zhu G, Huang L, Zhao ZK. 2012. Modular pathway engineering of diterpenoid synthases and the mevalonic acid pathway for miltiradiene production. J Am Chem Soc 134:3234-3241. https://doi.org/10.1021/ja2114486
-
(2012)
J Am Chem Soc
, vol.134
, pp. 3234-3241
-
-
Zhou, Y.J.1
Gao, W.2
Rong, Q.3
Jin, G.4
Chu, H.5
Liu, W.6
Yang, W.7
Zhu, Z.8
Li, G.9
Zhu, G.10
Huang, L.11
Zhao, Z.K.12
-
59
-
-
79551478567
-
Diversion of flux toward sesquiterpene production in Saccharomyces cerevisiae by fusion of host and heterologous enzymes
-
Albertsen L, Chen Y, Bach LS, Rattleff S, Maury J, Brix S, Nielsen J, Mortensen UH. 2011. Diversion of flux toward sesquiterpene production in Saccharomyces cerevisiae by fusion of host and heterologous enzymes. Appl Environ Microbiol 77:1033-1040. https://doi.org/10.1128/AEM.01361-10
-
(2011)
Appl Environ Microbiol
, vol.77
, pp. 1033-1040
-
-
Albertsen, L.1
Chen, Y.2
Bach, L.S.3
Rattleff, S.4
Maury, J.5
Brix, S.6
Nielsen, J.7
Mortensen, U.H.8
-
60
-
-
83055173108
-
Overexpression of Brassica juncea wild-type and mutant HMG-CoA synthase 1 in Arabidopsis up-regulates genes in sterol biosynthesis and enhances sterol production and stress tolerance
-
Wang H, Nagegowda DA, Rawat R, Bouvier-Nave P, Guo D, Bach TJ, Chye M-L. 2012. Overexpression of Brassica juncea wild-type and mutant HMG-CoA synthase 1 in Arabidopsis up-regulates genes in sterol biosynthesis and enhances sterol production and stress tolerance. Plant Biotechnol J 10:31-42. https://doi.org/10.1111/j.1467-7652.2011.00631.x
-
(2012)
Plant Biotechnol J
, vol.10
, pp. 31-42
-
-
Wang, H.1
Nagegowda, D.A.2
Rawat, R.3
Bouvier-Nave, P.4
Guo, D.5
Bach, T.J.6
Chye, M.-L.7
-
61
-
-
9144224870
-
Brassica juncea 3-hydroxy-3-methylglutaryl (HMG)-CoA synthase 1: expression and characterization of recombinant wild-type and mutant enzymes
-
Nagegowda DA, Bach TJ, Chye ML. 2004. Brassica juncea 3-hydroxy-3-methylglutaryl (HMG)-CoA synthase 1: expression and characterization of recombinant wild-type and mutant enzymes. Biochem J 383:517-527. https://doi.org/10.1042/BJ20040721
-
(2004)
Biochem J
, vol.383
, pp. 517-527
-
-
Nagegowda, D.A.1
Bach, T.J.2
Chye, M.L.3
-
62
-
-
84887620077
-
Construction of a plasmid for heterologous protein expression with a constitutive promoter in Trichoderma reesei
-
He RL, Zhang C, Guo W, Wang LX, Zhang DY, Chen SL. 2013. Construction of a plasmid for heterologous protein expression with a constitutive promoter in Trichoderma reesei. Plasmid 70:425-429. https://doi.org/10.1016/j.plasmid.2013.09.004
-
(2013)
Plasmid
, vol.70
, pp. 425-429
-
-
He, R.L.1
Zhang, C.2
Guo, W.3
Wang, L.X.4
Zhang, D.Y.5
Chen, S.L.6
-
63
-
-
84927523182
-
Cellular compartmentalization of secondary metabolism
-
Kistler HC, Broz K. 2015. Cellular compartmentalization of secondary metabolism. Front Microbiol 6:68. https://doi.org/10.3389/fmicb.2015.00068
-
(2015)
Front Microbiol
, vol.6
, pp. 68
-
-
Kistler, H.C.1
Broz, K.2
-
64
-
-
84907156522
-
Spatial and temporal control of fungal natural product synthesis
-
Lim FY, Keller NP. 2014. Spatial and temporal control of fungal natural product synthesis. Nat Prod Rep 31:1277-1286. https://doi.org/10.1039/C4NP00083H
-
(2014)
Nat Prod Rep
, vol.31
, pp. 1277-1286
-
-
Lim, F.Y.1
Keller, N.P.2
-
65
-
-
78650208991
-
Compartmentalization and molecular traffic in secondary metabolism: a new understanding of established cellular processes
-
Roze LV, Chanda A, Linz JE. 2011. Compartmentalization and molecular traffic in secondary metabolism: a new understanding of established cellular processes. Fungal Gen Biol 48:35-48. https://doi.org/10.1016/j.fgb.2010.05.006
-
(2011)
Fungal Gen Biol
, vol.48
, pp. 35-48
-
-
Roze, L.V.1
Chanda, A.2
Linz, J.E.3
-
66
-
-
84859833488
-
Role of peroxisomes in the biosynthesis and secretion of beta-lactams and other secondary metabolites
-
Martin JF, Ullan RV, Garcia-Estrada C. 2012. Role of peroxisomes in the biosynthesis and secretion of beta-lactams and other secondary metabolites. J Ind Microbiol Biotechnol 39:367-382. https://doi.org/10.1007/s10295-011-1063-z
-
(2012)
J Ind Microbiol Biotechnol
, vol.39
, pp. 367-382
-
-
Martin, J.F.1
Ullan, R.V.2
Garcia-Estrada, C.3
-
67
-
-
84877155775
-
Cellular development associated with induced mycotoxin synthesis in the filamentous fungus Fusarium graminearum
-
Menke J, Weber J, Broz K, Kistler HC. 2013. Cellular development associated with induced mycotoxin synthesis in the filamentous fungus Fusarium graminearum. PLoS One 8:e63077. https://doi.org/10.1371/journal.pone.0063077
-
(2013)
PLoS One
, vol.8
-
-
Menke, J.1
Weber, J.2
Broz, K.3
Kistler, H.C.4
-
68
-
-
85037351877
-
Biosynthetic machinery of diterpene pleuromutilin isolated from basidiomycete fungi
-
Yamane M, Minami A, Liu C, Ozaki T, Takeuchi I, Tsukagoshi T, Tokiwano T, Gomi K, Oikawa H. 2017. Biosynthetic machinery of diterpene pleuromutilin isolated from basidiomycete fungi. Chembiochem 18:2317-2322. https://doi.org/10.1002/cbic.201700434
-
(2017)
Chembiochem
, vol.18
, pp. 2317-2322
-
-
Yamane, M.1
Minami, A.2
Liu, C.3
Ozaki, T.4
Takeuchi, I.5
Tsukagoshi, T.6
Tokiwano, T.7
Gomi, K.8
Oikawa, H.9
-
69
-
-
3242889577
-
AUGUSTUS: a web server for gene finding in eukaryotes
-
Stanke M, Steinkamp R, Waack S, Morgenstern B. 2004. AUGUSTUS: a web server for gene finding in eukaryotes. Nucleic Acids Res 32: W309-W312. https://doi.org/10.1093/nar/gkh379
-
(2004)
Nucleic Acids Res
, vol.32
, pp. W309-W312
-
-
Stanke, M.1
Steinkamp, R.2
Waack, S.3
Morgenstern, B.4
-
70
-
-
84890330527
-
MEGA6: Molecular Evolutionary Genetics Analysis version 6.0
-
Tamura K, Stecher G, Peterson D, Filipski A, Kumar S. 2013. MEGA6: Molecular Evolutionary Genetics Analysis version 6.0. Mol Biol Evol 30:2725-2729. https://doi.org/10.1093/molbev/mst197
-
(2013)
Mol Biol Evol
, vol.30
, pp. 2725-2729
-
-
Tamura, K.1
Stecher, G.2
Peterson, D.3
Filipski, A.4
Kumar, S.5
-
72
-
-
0033529707
-
Functional characterization of the S. cerevisiae genome by gene deletion and parallel analysis
-
Winzeler EA, Shoemaker DD, Astromoff A, Liang H, Anderson K, Andre B, Bangham R, Benito R, Boeke JD, Bussey H, Chu AM, Connelly C, Davis K, Dietrich F, Dow SW, El Bakkoury M, Foury F, Friend SH, Gentalen E, Giaever G, Hegemann JH, Jones T, Laub M, Liao H, Liebundguth N, Lockhart DJ, Lucau-Danila A, Lussier M, M'Rabet N, Menard P, Mittmann M, Pai C, Rebischung C, Revuelta JL, Riles L, Roberts CJ, Ross-MacDonald P, Scherens B, Snyder M, Sookhai-Mahadeo S, Storms RK, Veronneau S, Voet M, Volckaert G, Ward TR, Wysocki R, Yen GS, Yu K, Zimmermann K, Philippsen P, et al. 1999. Functional characterization of the S. cerevisiae genome by gene deletion and parallel analysis. Science 285:901-906. https://doi.org/10.1126/science.285.5429.901
-
(1999)
Science
, vol.285
, pp. 901-906
-
-
Winzeler, E.A.1
Shoemaker, D.D.2
Astromoff, A.3
Liang, H.4
Anderson, K.5
Andre, B.6
Bangham, R.7
Benito, R.8
Boeke, J.D.9
Bussey, H.10
Chu, A.M.11
Connelly, C.12
Davis, K.13
Dietrich, F.14
Dow, S.W.15
El Bakkoury, M.16
Foury, F.17
Friend, S.H.18
Gentalen, E.19
Giaever, G.20
Hegemann, J.H.21
Jones, T.22
Laub, M.23
Liao, H.24
Liebundguth, N.25
Lockhart, D.J.26
Lucau-Danila, A.27
Lussier, M.28
M'Rabet, N.29
Menard, P.30
Mittmann, M.31
Pai, C.32
Rebischung, C.33
Revuelta, J.L.34
Riles, L.35
Roberts, C.J.36
Ross-MacDonald, P.37
Scherens, B.38
Snyder, M.39
Sookhai-Mahadeo, S.40
Storms, R.K.41
Veronneau, S.42
Voet, M.43
Volckaert, G.44
Ward, T.R.45
Wysocki, R.46
Yen, G.S.47
Yu, K.48
Zimmermann, K.49
Philippsen, P.50
more..
-
73
-
-
0030873221
-
Recombinationmediated PCR-directed plasmid construction in vivo in yeast
-
Oldenburg KR, Vo KT, Michaelis S, Paddon C. 1997. Recombinationmediated PCR-directed plasmid construction in vivo in yeast. Nucleic Acids Res 25:451-452. https://doi.org/10.1093/nar/25.2.451
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 451-452
-
-
Oldenburg, K.R.1
Vo, K.T.2
Michaelis, S.3
Paddon, C.4
-
74
-
-
0034214335
-
An interlaboratory comparison of physiological and genetic properties of four Saccharomyces cerevisiae strains
-
van Dijken JP, Bauer J, Brambilla L, Duboc P, Francois JM, Gancedo C, Giuseppin ML, Heijnen JJ, Hoare M, Lange HC, Madden EA, Niederberger P, Nielsen J, Parrou JL, Petit T, Porro D, Reuss M, van Riel N, Rizzi M, Steensma HY, Verrips CT, Vindelov J, Pronk JT. 2000. An interlaboratory comparison of physiological and genetic properties of four Saccharomyces cerevisiae strains. Enzyme Microb Technol 26:706-714. https://doi.org/10.1016/S0141-0229(00)00162-9
-
(2000)
Enzyme Microb Technol
, vol.26
, pp. 706-714
-
-
van Dijken, J.P.1
Bauer, J.2
Brambilla, L.3
Duboc, P.4
Francois, J.M.5
Gancedo, C.6
Giuseppin, M.L.7
Heijnen, J.J.8
Hoare, M.9
Lange, H.C.10
Madden, E.A.11
Niederberger, P.12
Nielsen, J.13
Parrou, J.L.14
Petit, T.15
Porro, D.16
Reuss, M.17
van Riel, N.18
Rizzi, M.19
Steensma, H.Y.20
Verrips, C.T.21
Vindelov, J.22
Pronk, J.T.23
more..
-
75
-
-
34347206860
-
High-efficiency yeast transformation using the LiAc/SS carrier DNA/PEG method
-
Gietz RD, Schiestl RH. 2007. High-efficiency yeast transformation using the LiAc/SS carrier DNA/PEG method. Nat Protoc 2:31-34. https://doi.org/10.1038/nprot.2007.13
-
(2007)
Nat Protoc
, vol.2
, pp. 31-34
-
-
Gietz, R.D.1
Schiestl, R.H.2
-
76
-
-
0029839311
-
Molecular, functional and evolutionary characterization of the gene encoding HMG-CoA reductase in the fission yeast, Schizosaccharomyces pombe
-
Lum PY, Edwards S, Wright R. 1996. Molecular, functional and evolutionary characterization of the gene encoding HMG-CoA reductase in the fission yeast, Schizosaccharomyces pombe. Yeast 12:1107-1124. https://doi.org/10.1002/(SICI)1097-0061(19960915)12:11 1107::AID-YEA9923.0.CO;2-E
-
(1996)
Yeast
, vol.12
, pp. 1107-1124
-
-
Lum, P.Y.1
Edwards, S.2
Wright, R.3
-
77
-
-
44949267924
-
Rapid assessment of S. cerevisiae mating type by PCR
-
Huxley C, Green ED, Dunham I. 1990. Rapid assessment of S. cerevisiae mating type by PCR. Trends Genet 6:236. https://doi.org/10.1016/0168-9525(90)90190-H
-
(1990)
Trends Genet
, vol.6
, pp. 236
-
-
Huxley, C.1
Green, E.D.2
Dunham, I.3
-
78
-
-
0035814339
-
The in vivo synthesis of plant sesquiterpenes by Escherichia coli
-
Martin VJ, Yoshikuni Y, Keasling JD. 2001. The in vivo synthesis of plant sesquiterpenes by Escherichia coli. Biotechnol Bioeng 75:497-503. https://doi.org/10.1002/bit.10037
-
(2001)
Biotechnol Bioeng
, vol.75
, pp. 497-503
-
-
Martin, V.J.1
Yoshikuni, Y.2
Keasling, J.D.3
-
79
-
-
85022158148
-
MEGA7: Molecular Evolutionary Genetics Analysis version 7.0 for bigger datasets
-
Kumar S, Stecher G, Tamura K. 2016. MEGA7: Molecular Evolutionary Genetics Analysis version 7.0 for bigger datasets. Mol Biol Evol 33: 1870-1874. https://doi.org/10.1093/molbev/msw054
-
(2016)
Mol Biol Evol
, vol.33
, pp. 1870-1874
-
-
Kumar, S.1
Stecher, G.2
Tamura, K.3
-
80
-
-
3042666256
-
MUSCLE: multiple sequence alignment with high accuracy and high throughput
-
Edgar RC. 2004. MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Res 32:1792-1797. https://doi.org/10.1093/nar/gkh340
-
(2004)
Nucleic Acids Res
, vol.32
, pp. 1792-1797
-
-
Edgar, R.C.1
-
81
-
-
65449188232
-
Jalview version 2-a multiple sequence alignment editor and analysis workbench
-
Waterhouse AM, Procter JB, Martin DMA, Clamp M, Barton GJ. 2009. Jalview version 2-a multiple sequence alignment editor and analysis workbench. Bioinformatics 25:1189-1191. https://doi.org/10.1093/bioinformatics/btp033
-
(2009)
Bioinformatics
, vol.25
, pp. 1189-1191
-
-
Waterhouse, A.M.1
Procter, J.B.2
Martin, D.M.A.3
Clamp, M.4
Barton, G.J.5
-
82
-
-
0026691182
-
The rapid generation of mutation data matrices from protein sequences
-
Jones DT, Taylor WR, Thornton JM. 1992. The rapid generation of mutation data matrices from protein sequences. Comput Appl Biosci 8:275-282
-
(1992)
Comput Appl Biosci
, vol.8
, pp. 275-282
-
-
Jones, D.T.1
Taylor, W.R.2
Thornton, J.M.3
-
83
-
-
0000461280
-
Confidence limits on phylogenies: an approach using the bootstrap
-
Felsenstein J. 1985. Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39:783-791. https://doi.org/10.1111/j.1558-5646.1985.tb00420.x
-
(1985)
Evolution
, vol.39
, pp. 783-791
-
-
Felsenstein, J.1
-
84
-
-
84927712897
-
GSDS 2.0: an upgraded gene feature visualization server
-
Hu B, Jin J, Guo A-Y, Zhang H, Luo J, Gao G. 2015. GSDS 2.0: an upgraded gene feature visualization server. Bioinformatics (Oxford, England) 31: 1296-1297. https://doi.org/10.1093/bioinformatics/btu817
-
(2015)
Bioinformatics (Oxford, England)
, vol.31
, pp. 1296-1297
-
-
Hu, B.1
Jin, J.2
Guo, A.-Y.3
Zhang, H.4
Luo, J.5
Gao, G.6
-
85
-
-
33746835442
-
Structural basis for the design of potent and species-specific inhibitors of 3-hydroxy-3-methylglutaryl CoA synthases
-
Pojer F, Ferrer JL, Richard SB, Nagegowda DA, Chye ML, Bach TJ, Noel JP. 2006. Structural basis for the design of potent and species-specific inhibitors of 3-hydroxy-3-methylglutaryl CoA synthases. Proc Natl Acad Sci U S A 103:11491-11496. https://doi.org/10.1073/pnas.0604935103
-
(2006)
Proc Natl Acad Sci U S A
, vol.103
, pp. 11491-11496
-
-
Pojer, F.1
Ferrer, J.L.2
Richard, S.B.3
Nagegowda, D.A.4
Chye, M.L.5
Bach, T.J.6
Noel, J.P.7
-
86
-
-
7244223384
-
Staphylococcus aureus 3-hydroxy-3-methylglutaryl-CoA synthase-crystal structure and mechanism
-
Campobasso N, Patel M, Wilding IE, Kallender H, Rosenberg M, Gwynn MN. 2004. Staphylococcus aureus 3-hydroxy-3-methylglutaryl-CoA synthase-crystal structure and mechanism. J Biol Chem 279:44883-44888. https://doi.org/10.1074/jbc.M407882200
-
(2004)
J Biol Chem
, vol.279
, pp. 44883-44888
-
-
Campobasso, N.1
Patel, M.2
Wilding, I.E.3
Kallender, H.4
Rosenberg, M.5
Gwynn, M.N.6
-
87
-
-
27444440540
-
X-ray crystal structures of HMG-CoA synthase from Enterococcus faecalis and a complex with its second substrate/inhibitor acetoacetyl-CoA
-
Steussy CN, Vartia AA, Burgner JW, Jr, Sutherlin A, Rodwell VW, Stauffacher CV. 2005. X-ray crystal structures of HMG-CoA synthase from Enterococcus faecalis and a complex with its second substrate/inhibitor acetoacetyl-CoA. Biochemistry 44:14256-14267. https://doi.org/10.1021/bi051487x
-
(2005)
Biochemistry
, vol.44
, pp. 14256-14267
-
-
Steussy, C.N.1
Vartia, A.A.2
Burgner, J.W.3
Sutherlin, A.4
Rodwell, V.W.5
Stauffacher, C.V.6
-
89
-
-
0028862319
-
Molecular cloning and sequencing of the hcs gene, which encodes 3-hydroxy-3-methylglutaryl coenzyme A synthase of Schizosaccharomyces pombe
-
Katayama S, Adachi N, Takao K, Nakagawa T, Matsuda H, Kawamukai M. 1995. Molecular cloning and sequencing of the hcs gene, which encodes 3-hydroxy-3-methylglutaryl coenzyme A synthase of Schizosaccharomyces pombe. Yeast 11:1533-1537. https://doi.org/10.1002/yea.320111509
-
(1995)
Yeast
, vol.11
, pp. 1533-1537
-
-
Katayama, S.1
Adachi, N.2
Takao, K.3
Nakagawa, T.4
Matsuda, H.5
Kawamukai, M.6
-
90
-
-
79953212957
-
Cloning and characterization of an Armillaria gallica cDNA encoding protoilludene synthase, which catalyzes the first committed step in the synthesis of antimicrobial melleolides
-
Engels B, Heinig U, Grothe T, Stadler M, Jennewein S. 2011. Cloning and characterization of an Armillaria gallica cDNA encoding protoilludene synthase, which catalyzes the first committed step in the synthesis of antimicrobial melleolides. J Biol Chem 286:6871-6878. https://doi.org/10.1074/jbc.M110.165845
-
(2011)
J Biol Chem
, vol.286
, pp. 6871-6878
-
-
Engels, B.1
Heinig, U.2
Grothe, T.3
Stadler, M.4
Jennewein, S.5
-
91
-
-
76149085865
-
CLM1 of Fusarium graminearum encodes a longiborneol synthase required for culmorin production
-
McCormick SP, Alexander NJ, Harris LJ. 2010. CLM1 of Fusarium graminearum encodes a longiborneol synthase required for culmorin production. Appl Environ Microbiol 76:136-141. https://doi.org/10.1128/AEM.02017-09
-
(2010)
Appl Environ Microbiol
, vol.76
, pp. 136-141
-
-
McCormick, S.P.1
Alexander, N.J.2
Harris, L.J.3
-
92
-
-
0024348930
-
Isolation and nucleotide sequence of a sesquiterpene cyclase gene from the trichothecene-producing fungus Fusarium sporotrichioides
-
Hohn TM, Beremand PD. 1989. Isolation and nucleotide sequence of a sesquiterpene cyclase gene from the trichothecene-producing fungus Fusarium sporotrichioides. Gene 79:131-138. https://doi.org/10.1016/0378-1119(89)90098-X
-
(1989)
Gene
, vol.79
, pp. 131-138
-
-
Hohn, T.M.1
Beremand, P.D.2
-
93
-
-
84873423087
-
Genetic dissection of sesquiterpene biosynthesis by Fusarium fujikuroi
-
Brock NL, Huss K, Tudzynski B, Dickschat JS. 2013. Genetic dissection of sesquiterpene biosynthesis by Fusarium fujikuroi. Chembiochem 14: 311-315. https://doi.org/10.1002/cbic.201200695
-
(2013)
Chembiochem
, vol.14
, pp. 311-315
-
-
Brock, N.L.1
Huss, K.2
Tudzynski, B.3
Dickschat, J.S.4
-
94
-
-
33847049467
-
X-ray crystal structure of aristolochene synthase from Aspergillus terreus and evolution of templates for the cyclization of farnesyl diphosphate
-
Shishova EY, Costanzo LD, Cane DE, Christianson DW. 2007. X-ray crystal structure of aristolochene synthase from Aspergillus terreus and evolution of templates for the cyclization of farnesyl diphosphate. Biochemistry 46:1941-1951. https://doi.org/10.1021/bi0622524
-
(2007)
Biochemistry
, vol.46
, pp. 1941-1951
-
-
Shishova, E.Y.1
Costanzo, L.D.2
Cane, D.E.3
Christianson, D.W.4
-
95
-
-
0034682766
-
Crystal structure determination of aristolochene synthase from the blue cheese mold, Penicillium roqueforti
-
Caruthers JM, Kang I, Rynkiewicz MJ, Cane DE, Christianson DW. 2000. Crystal structure determination of aristolochene synthase from the blue cheese mold, Penicillium roqueforti. J Biol Chem 275:25533-25539. https://doi.org/10.1074/jbc.M000433200
-
(2000)
J Biol Chem
, vol.275
, pp. 25533-25539
-
-
Caruthers, J.M.1
Kang, I.2
Rynkiewicz, M.J.3
Cane, D.E.4
Christianson, D.W.5
-
96
-
-
58949098919
-
Sesquiterpene synthase from the botrydial biosynthetic gene cluster of the phytopathogen Botrytis cinerea
-
Pinedo C, Wang CM, Pradier JM, Dalmais B, Choquer M, Le Pecheur P, Morgant G, Collado IG, Cane DE, Viaud M. 2008. Sesquiterpene synthase from the botrydial biosynthetic gene cluster of the phytopathogen Botrytis cinerea. ACS Chem Biol 3:791-801. https://doi.org/10.1021/cb800225v
-
(2008)
ACS Chem Biol
, vol.3
, pp. 791-801
-
-
Pinedo, C.1
Wang, C.M.2
Pradier, J.M.3
Dalmais, B.4
Choquer, M.5
Le Pecheur, P.6
Morgant, G.7
Collado, I.G.8
Cane, D.E.9
Viaud, M.10
-
97
-
-
0028240983
-
Pentalenene synthase. Purification, molecular cloning, sequencing, and high-level expression in Escherichia coli of a terpenoid cyclase from Streptomyces UC5319
-
Cane DE, Sohng JK, Lamberson CR, Rudnicki SM, Wu Z, Lloyd MD, Oliver JS, Hubbard BR. 1994. Pentalenene synthase. Purification, molecular cloning, sequencing, and high-level expression in Escherichia coli of a terpenoid cyclase from Streptomyces UC5319. Biochemistry 33:5846-5857. https://doi.org/10.1021/bi00185a024
-
(1994)
Biochemistry
, vol.33
, pp. 5846-5857
-
-
Cane, D.E.1
Sohng, J.K.2
Lamberson, C.R.3
Rudnicki, S.M.4
Wu, Z.5
Lloyd, M.D.6
Oliver, J.S.7
Hubbard, B.R.8
|