-
1
-
-
0034022596
-
Gene finding in Drosophila melanogaster
-
Reese,M.G., Kulp,D., Tammana,H. and Haussler,D. (2000) Gene finding in Drosophila melanogaster. Genome Res., 10, 529-538.
-
(2000)
Genome Res.
, vol.10
, pp. 529-538
-
-
Reese, M.G.1
Kulp, D.2
Tammana, H.3
Haussler, D.4
-
2
-
-
0003415703
-
Identification of genes in human genomic DNA
-
Ph.D. Thesis, 'Stanford University', Stanford, CA, USA
-
Burge,C.B. (1997) Identification of genes in human genomic DNA. Ph.D. Thesis, 'Stanford University', Stanford, CA, USA.
-
(1997)
-
-
Burge, C.B.1
-
3
-
-
0034061137
-
GeneID in Drosophila
-
Parra,G., Blanco,E. and Guigó,R. (2000) GeneID in Drosophila. Genome Res., 10, 511-515.
-
(2000)
Genome Res.
, vol.10
, pp. 511-515
-
-
Parra, G.1
Blanco, E.2
Guigó, R.3
-
4
-
-
0035002807
-
Evaluation of gene-finding programs on mammalian sequences
-
Rogic,S., Mackworth,A.K. and Ouellette,F.B.F. (2001) Evaluation of gene-finding programs on mammalian sequences. Genome Res., 11, 817-832.
-
(2001)
Genome Res.
, vol.11
, pp. 817-832
-
-
Rogic, S.1
Mackworth, A.K.2
Ouellette, F.B.F.3
-
5
-
-
0030768930
-
Computational methods for the identification of genes in vertebrate genomic sequences
-
Claverie,J.-M. (1997) Computational methods for the identification of genes in vertebrate genomic sequences. Hum. Mol. Genet., 6, 1735-1744.
-
(1997)
Hum. Mol. Genet.
, vol.6
, pp. 1735-1744
-
-
Claverie, J.-M.1
-
6
-
-
0033782834
-
An assessment of gene prediction accuracy in large DNA sequences
-
Guigó,R., Agarwal,P., Abril,J., Burset,M. and Fickett,J.W. (2000) An assessment of gene prediction accuracy in large DNA sequences. Genome Res., 10, 1631-1642.
-
(2000)
Genome Res.
, vol.10
, pp. 1631-1642
-
-
Guigó, R.1
Agarwal, P.2
Abril, J.3
Burset, M.4
Fickett, J.W.5
-
7
-
-
0036772510
-
Comparative ab initio prediction of gene structures using pair HMMs
-
Meyer,I.M. and Durbin,R. (2002) Comparative ab initio prediction of gene structures using pair HMMs. Bioinformatics, 18, 1309-1318.
-
(2002)
Bioinformatics
, vol.18
, pp. 1309-1318
-
-
Meyer, I.M.1
Durbin, R.2
-
8
-
-
17444437765
-
Integrating genomic homology into gene structure prediction
-
Korf,I., Flicek,P., Duan,D. and Brent,M.R. (2001) Integrating genomic homology into gene structure prediction. Bioinformatics, 1(Suppl. 1), S1-S9.
-
(2001)
Bioinformatics
, vol.1
, Issue.SUPPL. 1
-
-
Korf, I.1
Flicek, P.2
Duan, D.3
Brent, M.R.4
-
9
-
-
2942527473
-
Gene prediction with a hidden Markov model and new intron submodel
-
Stanke,M. and Waack,S. (2003) Gene prediction with a hidden Markov model and new intron submodel. Bioinformatics, 19(Suppl. 2), ii215-ii225.
-
(2003)
Bioinformatics
, vol.19
, Issue.SUPPL. 2
-
-
Stanke, M.1
Waack, S.2
-
10
-
-
3242892928
-
Gene prediction with a hidden markov model
-
Ph.D. Thesis, 'University of Göttingen', Germany
-
Stanke,M. (2004) Gene prediction with a hidden markov model. Ph.D. Thesis, 'University of Göttingen', Germany.
-
(2004)
-
-
Stanke, M.1
-
11
-
-
0034061086
-
Genome annotation assessment in Drosophila melanogaster
-
Reese,M.G., Hartzell,G., Harris,N.L., Ohler,U., Abril,J.F. and Lewis,S.E. (2000) Genome annotation assessment in Drosophila melanogaster. Genome Res., 10, 391-393.
-
(2000)
Genome Res.
, vol.10
, pp. 391-393
-
-
Reese, M.G.1
Hartzell, G.2
Harris, N.L.3
Ohler, U.4
Abril, J.F.5
Lewis, S.E.6
-
12
-
-
0037249406
-
The FlyBase database of the Drosophila genome projects and community literature
-
The FlyBase Consortium
-
The FlyBase Consortium (2003) The FlyBase database of the Drosophila genome projects and community literature. Nucleic Acids Res., 31, 172-175, http://flybase.org/.
-
(2003)
Nucleic Acids Res.
, vol.31
, pp. 172-175
-
-
-
13
-
-
0033745748
-
gff2ps: Visualizing genomic annotations
-
Abril,J.F. and Guigó,R. (2000) gff2ps: visualizing genomic annotations. Bioinformatics, 16, 743-744.
-
(2000)
Bioinformatics
, vol.16
, pp. 743-744
-
-
Abril, J.F.1
Guigó, R.2
-
14
-
-
3242884399
-
Gewinnung extrinsischer Informationen zur Genvorhersage und Einbindung in ein Hidden Markov Modell
-
Diploma thesis, 'University of Göttingen', Germany
-
Schöffmann,O. (2003) Gewinnung extrinsischer Informationen zur Genvorhersage und Einbindung in ein Hidden Markov Modell. Diploma thesis, 'University of Göttingen', Germany.
-
(2003)
-
-
Schöffmann, O.1
-
15
-
-
2942579268
-
The conserved exon method for gene finding
-
Bafna,V. and Huson,D.H. (2000) The conserved exon method for gene finding. Bioinformatics, 16, 190-202.
-
(2000)
Bioinformatics
, vol.16
, pp. 190-202
-
-
Bafna, V.1
Huson, D.H.2
-
16
-
-
0033861549
-
Human and mouse gene structure: Comparative analysis and application to exon prediction
-
Batzoglou,S., Pachter,L., Mesirov,J.P., Berger,B. and Lander,E.S. (2000) Human and mouse gene structure: comparative analysis and application to exon prediction, Genome Res., 10, 950-958.
-
(2000)
Genome Res.
, vol.10
, pp. 950-958
-
-
Batzoglou, S.1
Pachter, L.2
Mesirov, J.P.3
Berger, B.4
Lander, E.S.5
-
17
-
-
0036455972
-
AGenDA: Gene prediction by comparative sequence analysis
-
Rinner,O. and Morgenstern,B. (2002) AGenDA: gene prediction by comparative sequence analysis. In Silico Biol., 2, 195-205.
-
(2002)
In Silico Biol.
, vol.2
, pp. 195-205
-
-
Rinner, O.1
Morgenstern, B.2
-
18
-
-
85009205020
-
Orphan gene finding - An exon assembly approach
-
Blayo,P., Rouzé,P, and Sagot,M.-F. (2003) Orphan gene finding - an exon assembly approach. Theor. Comput. Sci., 290, 1407-1431.
-
(2003)
Theor. Comput. Sci.
, vol.290
, pp. 1407-1431
-
-
Blayo, P.1
Rouzé, P.2
Sagot, M.-F.3
-
19
-
-
0034832202
-
SGP-1: Prediction and validation of homologous genes based on sequence alignments
-
Wiehe,T., Gebauer-Jung,S., Mitchell-Olds,T. and Guigó,R. (2001) SGP-1: Prediction and validation of homologous genes based on sequence alignments. Genome Res., 11, 1574-1583.
-
(2001)
Genome Res.
, vol.11
, pp. 1574-1583
-
-
Wiehe, T.1
Gebauer-Jung, S.2
Mitchell-Olds, T.3
Guigó, R.4
-
20
-
-
0042622343
-
SLAM web server for comparative gene finding and alignment
-
Cawley,S., Pachter,L. and Alexandersson,M. (2003), SLAM web server for comparative gene finding and alignment. Nucleic Acids Res., 31, 3507-3509.
-
(2003)
Nucleic Acids Res.
, vol.31
, pp. 3507-3509
-
-
Cawley, S.1
Pachter, L.2
Alexandersson, M.3
-
21
-
-
0037268583
-
Comparative gene prediction in human and mouse
-
Parra,G., Agarwal,P., Abril,J.F., Wiehe,T., Fickett,J.W. and Guigó,R. (2003) Comparative gene prediction in human and mouse. Genome Res., 13, 108-117.
-
(2003)
Genome Res.
, vol.13
, pp. 108-117
-
-
Parra, G.1
Agarwal, P.2
Abril, J.F.3
Wiehe, T.4
Fickett, J.W.5
Guigó, R.6
-
22
-
-
0032945593
-
DIALIGN 2: Improvement of the segment-to-segment approach to multiple sequence alignment
-
Morgenstern,B. (1999) DIALIGN 2: improvement of the segment-to-segment approach to multiple sequence alignment. Bioinformatics, 15, 211-218.
-
(1999)
Bioinformatics
, vol.15
, pp. 211-218
-
-
Morgenstern, B.1
-
23
-
-
0036300594
-
Exon discovery by genomic sequence alignment
-
Morgenstern,B., Rinner,O., Abdeddaïm,S., Haase,D., Mayer,K., Dress,A. and Mewes,H.-W. (2002) Exon discovery by genomic sequence alignment. Bioinformatics, 18, 777-787.
-
(2002)
Bioinformatics
, vol.18
, pp. 777-787
-
-
Morgenstern, B.1
Rinner, O.2
Abdeddaïm, S.3
Haase, D.4
Mayer, K.5
Dress, A.6
Mewes, H.-W.7
-
24
-
-
2942603015
-
-
Brudno,M., Chapman,M., Göttgens,B., Batzoglou,S. and Morgenstern,B. (2003) BMC Bioinformatics, 4, 66.
-
(2003)
BMC Bioinformatics
, vol.4
, pp. 66
-
-
Brudno, M.1
Chapman, M.2
Göttgens, B.3
Batzoglou, S.4
Morgenstern, B.5
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