-
1
-
-
84891862369
-
Effects of concentrated arabinoxylan and beta-glucan compared with refined wheat and whole grain rye on glucose and appetite in subjects with the metabolic syndrome: A randomized study
-
PMID: 24253758
-
Hartvigsen ML, Gregersen S, Laerke HN, Holst JJ, Bach Knudsen KE, Hermansen K. Effects of concentrated arabinoxylan and beta-glucan compared with refined wheat and whole grain rye on glucose and appetite in subjects with the metabolic syndrome: a randomized study. European journal of clinical nutrition. 2014; 68(1):84-90. doi: 10.1038/ejcn.2013.236 PMID: 24253758
-
(2014)
European Journal of Clinical Nutrition
, vol.68
, Issue.1
, pp. 84-90
-
-
Hartvigsen, M.L.1
Gregersen, S.2
Laerke, H.N.3
Holst, J.J.4
Bach Knudsen, K.E.5
Hermansen, K.6
-
3
-
-
0037395697
-
Whole-grain rye and wheat foods and markers of bowel health in overweight middle-aged men
-
PMID: 12663299
-
McIntosh GH, Noakes M, Royle PJ, Foster PR. Whole-grain rye and wheat foods and markers of bowel health in overweight middle-aged men. The American Journal of Clinical Nutrition. 2003; 77(4):967-74. PMID: 12663299
-
(2003)
The American Journal of Clinical Nutrition
, vol.77
, Issue.4
, pp. 967-974
-
-
McIntosh, G.H.1
Noakes, M.2
Royle, P.J.3
Foster, P.R.4
-
4
-
-
84883110880
-
Richness of human gut microbiome correlates with metabolic markers
-
PMID: 23985870
-
Le Chatelier E, Nielsen T, Qin J, Prifti E, Hildebrand F, Falony G, et al. Richness of human gut microbiome correlates with metabolic markers. Nature. 2013; 500(7464):541-6. doi: 10.1038/nature12506 PMID: 23985870
-
(2013)
Nature
, vol.500
, Issue.7464
, pp. 541-546
-
-
Le Chatelier, E.1
Nielsen, T.2
Qin, J.3
Prifti, E.4
Hildebrand, F.5
Falony, G.6
-
5
-
-
84874710218
-
A Diet High in Resistant Starch Modulates Microbiota Composition, SCFA Concentrations, and Gene Expression in Pig Intestine
-
Haenen D, Zhang J, da Silva CS, Bosch G, van der Meer IM, van Arkel J, et al. A Diet High in Resistant Starch Modulates Microbiota Composition, SCFA Concentrations, and Gene Expression in Pig Intestine. The Journal of nutrition. 2013. doi: 10.3945/jn.112.169672
-
(2013)
The Journal of Nutrition
-
-
Haenen, D.1
Zhang, J.2
Da Silva, C.S.3
Bosch, G.4
Van Der Meer, I.M.5
Van Arkel, J.6
-
6
-
-
34347384676
-
Improvement of obesity and glucose tolerance by acetate in Type 2 diabetic Otsuka Long-Evans Tokushima Fatty (OLETF) rats
-
JST.JSTAGE/bbb/60668 [pii]. PMID: 17485860
-
Yamashita H, Fujisawa K, Ito E, Idei S, Kawaguchi N, Kimoto M, et al. Improvement of obesity and glucose tolerance by acetate in Type 2 diabetic Otsuka Long-Evans Tokushima Fatty (OLETF) rats. Bioscience, biotechnology, and biochemistry. 2007; 71(5):1236-43. JST.JSTAGE/bbb/60668 [pii]. PMID: 17485860
-
(2007)
Bioscience, Biotechnology, and Biochemistry
, vol.71
, Issue.5
, pp. 1236-1243
-
-
Yamashita, H.1
Fujisawa, K.2
Ito, E.3
Idei, S.4
Kawaguchi, N.5
Kimoto, M.6
-
7
-
-
84859587827
-
Butyrate and propionate protect against diet-induced obesity and regulate gut hormones via free fatty acid receptor 3-independent mechanisms
-
PMID: 22506074
-
Lin HV, Frassetto A, Kowalik EJ Jr., Nawrocki AR, Lu MM, Kosinski JR, et al. Butyrate and propionate protect against diet-induced obesity and regulate gut hormones via free fatty acid receptor 3-independent mechanisms. PloS one. 2012; 7(4):e35240. doi: 10.1371/journal.pone.0035240 PMID: 22506074
-
(2012)
PloS One
, vol.7
, Issue.4
-
-
Lin, H.V.1
Frassetto, A.2
Kowalik, E.J.3
Nawrocki, A.R.4
Lu, M.M.5
Kosinski, J.R.6
-
8
-
-
67649238355
-
Butyrate improves insulin sensitivity and increases energy expenditure in mice
-
PMID: 19366864
-
Gao Z, Yin J, Zhang J, Ward RE, Martin RJ, Lefevre M, et al. Butyrate improves insulin sensitivity and increases energy expenditure in mice. Diabetes. 2009; 58(7):1509-17. doi: 10.2337/db08-1637 PMID: 19366864
-
(2009)
Diabetes
, vol.58
, Issue.7
, pp. 1509-1517
-
-
Gao, Z.1
Yin, J.2
Zhang, J.3
Ward, R.E.4
Martin, R.J.5
Lefevre, M.6
-
9
-
-
84873723371
-
The influence of diet on the gut microbiota
-
Epub 2012/11/14. PMID: 23147033
-
Scott KP, Gratz SW, Sheridan PO, Flint HJ, Duncan SH. The influence of diet on the gut microbiota. Pharmacological research. 2013; 69(1):52-60. Epub 2012/11/14. doi: 10.1016/j.phrs.2012.10.020 PMID: 23147033.
-
(2013)
Pharmacological Research
, vol.69
, Issue.1
, pp. 52-60
-
-
Scott, K.P.1
Gratz, S.W.2
Sheridan, P.O.3
Flint, H.J.4
Duncan, S.H.5
-
10
-
-
79952047780
-
Effects of dietary fiber and its components on metabolic health
-
10.3390/nu2121266; PMID: 22254008
-
Lattimer JM, Haub MD. Effects of dietary fiber and its components on metabolic health. Nutrients. 2010; 2(12):1266-89. 10.3390/nu2121266; doi: 10.3390/nu2121266 PMID: 22254008
-
(2010)
Nutrients
, vol.2
, Issue.12
, pp. 1266-1289
-
-
Lattimer, J.M.1
Haub, M.D.2
-
11
-
-
0026482073
-
Proceedings for the 2nd plenary meeting of EURESTA: European FLAIR Concerted Action No. 11 on physiological implications of the consumption of resistant starch in man. Crete, 29 May-2 June 1991
-
Starch Resistant
-
Starch Resistant. Proceedings for the 2nd plenary meeting of EURESTA: European FLAIR Concerted Action No. 11 on physiological implications of the consumption of resistant starch in man. Crete, 29 May-2 June 1991. European journal of clinical nutrition. 1992; 46 Suppl 2:S1-148.
-
(1992)
European Journal of Clinical Nutrition
, vol.46
, pp. S1-S148
-
-
-
12
-
-
0026597266
-
Cornstarch fermentation by the colonic microbial community yields more butyrate than does cabbage fiber fermentation; cornstarch fermentation rates correlate negatively with methanogenesis
-
PMID:1309475
-
Weaver GA, Krause JA, Miller TL, Wolin MJ. Cornstarch fermentation by the colonic microbial community yields more butyrate than does cabbage fiber fermentation; cornstarch fermentation rates correlate negatively with methanogenesis. The American Journal of Clinical Nutrition. 1992; 55(1):70-7. PMID:1309475
-
(1992)
The American Journal of Clinical Nutrition
, vol.55
, Issue.1
, pp. 70-77
-
-
Weaver, G.A.1
Krause, J.A.2
Miller, T.L.3
Wolin, M.J.4
-
13
-
-
0028314302
-
Effect of resistant starch on colonic fermentation, bile acid metabolism, and mucosal proliferation
-
PMID: 8149850
-
van Munster IP, Tangerman A, Nagengast FM. Effect of resistant starch on colonic fermentation, bile acid metabolism, and mucosal proliferation. Digestive diseases and sciences. 1994; 39(4):834-42. PMID: 8149850
-
(1994)
Digestive Diseases and Sciences
, vol.39
, Issue.4
, pp. 834-842
-
-
Van Munster, I.P.1
Tangerman, A.2
Nagengast, F.M.3
-
14
-
-
78649734540
-
Resistant starches types 2 and 4 have differential effects on the composition of the fecal microbiota in human subjects
-
PMID: 21151493
-
Martinez I, Kim J, Duffy PR, Schlegel VL, Walter J. Resistant starches types 2 and 4 have differential effects on the composition of the fecal microbiota in human subjects. PloS one. 2010; 5(11):e15046. doi: 10.1371/journal.pone.0015046 PMID: 21151493
-
(2010)
PloS One
, vol.5
, Issue.11
-
-
Martinez, I.1
Kim, J.2
Duffy, P.R.3
Schlegel, V.L.4
Walter, J.5
-
15
-
-
84925581144
-
Diets high in resistant starch and arabinoxylan modulate digestion processes and SCFA pool size in the large intestine and faecal microbial composition in pigs
-
Nielsen TS, Laerke HN, Theil PK, Sorensen JF, Saarinen M, Forssten S, et al. Diets high in resistant starch and arabinoxylan modulate digestion processes and SCFA pool size in the large intestine and faecal microbial composition in pigs. The British journal of nutrition. 2014:1-13. S000711451400302X [pii].
-
(2014)
The British Journal of Nutrition
, pp. 1-13
-
-
Nielsen, T.S.1
Laerke, H.N.2
Theil, P.K.3
Sorensen, J.F.4
Saarinen, M.5
Forssten, S.6
-
16
-
-
84872002476
-
The intestinal microbiota in aged mice is modulated by dietary resistant starch and correlated with improvements in host responses
-
PMID: 22909308
-
Tachon S, Zhou J, Keenan M, Martin R, Marco ML. The intestinal microbiota in aged mice is modulated by dietary resistant starch and correlated with improvements in host responses. FEMS microbiology ecology. 2013; 83(2):299-309. doi: 10.1111/j.1574-6941.2012.01475.x PMID: 22909308
-
(2013)
FEMS Microbiology Ecology
, vol.83
, Issue.2
, pp. 299-309
-
-
Tachon, S.1
Zhou, J.2
Keenan, M.3
Martin, R.4
Marco, M.L.5
-
17
-
-
55949117839
-
Phylotypes related to Ruminococcus bromii are abundant in the large bowel of humans and increase in response to a diet high in resistant starch
-
PMID: 18616586
-
Abell GC, Cooke CM, Bennett CN, Conlon MA, McOrist AL. Phylotypes related to Ruminococcus bromii are abundant in the large bowel of humans and increase in response to a diet high in resistant starch. FEMS microbiology ecology. 2008; 66(3):505-15. doi: 10.1111/j.1574-6941.2008.00527.x PMID: 18616586
-
(2008)
FEMS Microbiology Ecology
, vol.66
, Issue.3
, pp. 505-515
-
-
Abell, G.C.1
Cooke, C.M.2
Bennett, C.N.3
Conlon, M.A.4
McOrist, A.L.5
-
18
-
-
84863990011
-
Ruminococcus bromii is a keystone species for the degradation of resistant starch in the human colon
-
PMID: 22343308
-
Ze X, Duncan SH, Louis P, Flint HJ. Ruminococcus bromii is a keystone species for the degradation of resistant starch in the human colon. The ISME journal. 2012; 6(8):1535-43. doi: 10.1038/ismej.2012.4 PMID: 22343308
-
(2012)
The ISME Journal
, vol.6
, Issue.8
, pp. 1535-1543
-
-
Ze, X.1
Duncan, S.H.2
Louis, P.3
Flint, H.J.4
-
19
-
-
78751580602
-
Dominant and diet-responsive groups of bacteria within the human colonic microbiota
-
Epub 2010/08/06. PMID: 20686513; PubMed Central PMCID: PMCPmc3105703
-
Walker AW, Ince J, Duncan SH, Webster LM, Holtrop G, Ze X, et al. Dominant and diet-responsive groups of bacteria within the human colonic microbiota. Isme j. 2011; 5(2):220-30. Epub 2010/08/06. doi: 10.1038/ismej.2010.118 PMID: 20686513; PubMed Central PMCID: PMCPmc3105703.
-
(2011)
Isme J
, vol.5
, Issue.2
, pp. 220-230
-
-
Walker, A.W.1
Ince, J.2
Duncan, S.H.3
Webster, L.M.4
Holtrop, G.5
Ze, X.6
-
20
-
-
35548934641
-
Wheat arabinoxylans: Exploiting variation in amount and composition to develop enhanced varieties
-
Saulnier L, Sada P-E, Branlard G, Charmet G, Guillon F. Wheat arabinoxylans: Exploiting variation in amount and composition to develop enhanced varieties. Journal of Cereal Science. 2007; 46(3):261-81.
-
(2007)
Journal of Cereal Science
, vol.46
, Issue.3
, pp. 261-281
-
-
Saulnier, L.1
Sada, P.-E.2
Branlard, G.3
Charmet, G.4
Guillon, F.5
-
21
-
-
22144477946
-
Rye bread enhances the production and plasma concentration of butyrate but not the plasma concentrations of glucose and insulin in pigs
-
135/7/1696 [pii]. PMID: 15987852
-
Bach Knudsen KE, Serena A, Kjaer AK, Jorgensen H, Engberg R. Rye bread enhances the production and plasma concentration of butyrate but not the plasma concentrations of glucose and insulin in pigs. The Journal of nutrition. 2005; 135(7):1696-704. 135/7/1696 [pii]. PMID: 15987852
-
(2005)
The Journal of Nutrition
, vol.135
, Issue.7
, pp. 1696-1704
-
-
Bach Knudsen, K.E.1
Serena, A.2
Kjaer, A.K.3
Jorgensen, H.4
Engberg, R.5
-
22
-
-
79958248593
-
Prebiotic effects of wheat arabinoxylan related to the increase in bifidobacteria, Roseburia and Bacteroides/Prevotella in diet-induced obese mice
-
PMID: 21695273
-
Neyrinck AM, Possemiers S, Druart C, Van de Wiele T, De Backer F, Cani PD, et al. Prebiotic effects of wheat arabinoxylan related to the increase in bifidobacteria, Roseburia and Bacteroides/Prevotella in diet-induced obese mice. PloS one. 2011; 6(6):e20944. doi: 10.1371/journal.pone.0020944 PMID: 21695273
-
(2011)
PloS One
, vol.6
, Issue.6
-
-
Neyrinck, A.M.1
Possemiers, S.2
Druart, C.3
Van De Wiele, T.4
De Backer, F.5
Cani, P.D.6
-
23
-
-
84876965054
-
Intake of whole-grain and fiber-rich rye bread versus refined wheat bread does not differentiate intestinal microbiota composition in Finnish adults with metabolic syndrome
-
PMID: 23514765
-
Lappi J, Salojarvi J, Kolehmainen M, Mykkanen H, Poutanen K, de Vos WM, et al. Intake of whole-grain and fiber-rich rye bread versus refined wheat bread does not differentiate intestinal microbiota composition in Finnish adults with metabolic syndrome. The Journal of nutrition. 2013; 143(5):648-55. doi: 10.3945/jn.112.172668 PMID: 23514765
-
(2013)
The Journal of Nutrition
, vol.143
, Issue.5
, pp. 648-655
-
-
Lappi, J.1
Salojarvi, J.2
Kolehmainen, M.3
Mykkanen, H.4
Poutanen, K.5
De Vos, W.M.6
-
24
-
-
33845353653
-
Arabinoxylan fibre consumption improved glucose metabolism, but did not affect serum adipokines in subjects with impaired glucose tolerance
-
PMID: 17111305
-
Garcia AL, Steiniger J, Reich SC, Weickert MO, Harsch I, Machowetz A, et al. Arabinoxylan fibre consumption improved glucose metabolism, but did not affect serum adipokines in subjects with impaired glucose tolerance. Hormone and metabolic research = Hormon- und Stoffwechselforschung = Hormones et metabolisme. 2006; 38(11):761-6. doi: 10.1055/s-2006-955089 PMID: 17111305
-
(2006)
Hormone and Metabolic Research = Hormon- und Stoffwechselforschung = Hormones et Metabolisme
, vol.38
, Issue.11
, pp. 761-766
-
-
Garcia, A.L.1
Steiniger, J.2
Reich, S.C.3
Weickert, M.O.4
Harsch, I.5
Machowetz, A.6
-
25
-
-
33847687249
-
Arabinoxylan consumption decreases postprandial serum glucose, serum insulin and plasma total ghrelin response in subjects with impaired glucose tolerance
-
PMID: 16988651
-
Garcia AL, Otto B, Reich SC, Weickert MO, Steiniger J, Machowetz A, et al. Arabinoxylan consumption decreases postprandial serum glucose, serum insulin and plasma total ghrelin response in subjects with impaired glucose tolerance. European journal of clinical nutrition. 2007; 61(3):334-41. doi: 10.1038/sj.ejcn.1602525 PMID: 16988651
-
(2007)
European Journal of Clinical Nutrition
, vol.61
, Issue.3
, pp. 334-341
-
-
Garcia, A.L.1
Otto, B.2
Reich, S.C.3
Weickert, M.O.4
Steiniger, J.5
Machowetz, A.6
-
26
-
-
16544382398
-
Arabinoxylan fibre improves metabolic control in people with Type II diabetes
-
PMID: 15042130
-
Lu ZX, Walker KZ, Muir JG, O'Dea K. Arabinoxylan fibre improves metabolic control in people with Type II diabetes. European journal of clinical nutrition. 2004; 58(4):621-8. doi: 10.1038/sj.ejcn.1601857 PMID: 15042130
-
(2004)
European Journal of Clinical Nutrition
, vol.58
, Issue.4
, pp. 621-628
-
-
Lu, Z.X.1
Walker, K.Z.2
Muir, J.G.3
O'Dea, K.4
-
27
-
-
25144459980
-
The metabolic syndrome - A new worldwide definition
-
PMID: 16182882
-
Alberti KG, Zimmet P, Shaw J, Group IDFETFC. The metabolic syndrome - a new worldwide definition. Lancet. 2005; 366(9491):1059-62. S0140-6736(05)67402-8 [pii]. PMID: 16182882
-
(2005)
Lancet
, vol.366
, Issue.9491
, pp. 1059-1062
-
-
Alberti, K.G.1
Zimmet, P.2
Shaw, J.3
-
28
-
-
0026468155
-
Classification and measurement of nutritionally important starch fractions
-
PMID: 1330528
-
Englyst HN, Kingman SM, Cummings JH. Classification and measurement of nutritionally important starch fractions. European journal of clinical nutrition. 1992; 46 Suppl 2:S33-50. PMID: 1330528
-
(1992)
European Journal of Clinical Nutrition
, vol.46
, pp. S33-S50
-
-
Englyst, H.N.1
Kingman, S.M.2
Cummings, J.H.3
-
29
-
-
79960262188
-
An overview of randomization techniques: An unbiased assessment of outcome in clinical research
-
PMID: 21772732
-
Suresh K. An overview of randomization techniques: An unbiased assessment of outcome in clinical research. Journal of human reproductive sciences. 2011; 4(1):8-11. doi: 10.4103/0974-1208.82352 PMID: 21772732
-
(2011)
Journal of Human Reproductive Sciences
, vol.4
, Issue.1
, pp. 8-11
-
-
Suresh, K.1
-
30
-
-
84897980909
-
Resistant starch and arabinoxylan augment SCFA absorption, but affect postprandial glucose and insulin responses differently
-
PMID: 24507768
-
Ingerslev AK, Theil PK, Hedemann MS, Laerke HN, Bach Knudsen KE. Resistant starch and arabinoxylan augment SCFA absorption, but affect postprandial glucose and insulin responses differently. The British journal of nutrition. 2014; 111(9):1564-76. doi: 10.1017/S0007114513004066 PMID: 24507768
-
(2014)
The British Journal of Nutrition
, vol.111
, Issue.9
, pp. 1564-1576
-
-
Ingerslev, A.K.1
Theil, P.K.2
Hedemann, M.S.3
Laerke, H.N.4
Bach Knudsen, K.E.5
-
31
-
-
0030942155
-
The irritable bowel severity scoring system: A simple method of monitoring irritable bowel syndrome and its progress
-
Francis CY, Morris J, Whorwell PJ. The irritable bowel severity scoring system: a simple method of monitoring irritable bowel syndrome and its progress. Alimentary Pharmacology & Therapeutics. 1997; 11(2):395-402.
-
(1997)
Alimentary Pharmacology & Therapeutics
, vol.11
, Issue.2
, pp. 395-402
-
-
Francis, C.Y.1
Morris, J.2
Whorwell, P.J.3
-
32
-
-
0023832668
-
GSRS - A clinical rating scale for gastrointestinal symptoms in patients with irritable bowel syndrome and peptic ulcer disease
-
PMID: 3123181
-
Svedlund J, Sjodin I, Dotevall G. GSRS - a clinical rating scale for gastrointestinal symptoms in patients with irritable bowel syndrome and peptic ulcer disease. Digestive diseases and sciences. 1988; 33(2):129-34. PMID: 3123181
-
(1988)
Digestive Diseases and Sciences
, vol.33
, Issue.2
, pp. 129-134
-
-
Svedlund, J.1
Sjodin, I.2
Dotevall, G.3
-
33
-
-
0030868530
-
Stool form scale as a useful guide to intestinal transit time
-
PMID: 9299672
-
Lewis SJ, Heaton KW. Stool form scale as a useful guide to intestinal transit time. Scandinavian Journal of Gastroenterology. 1997; 32(9):920-4. doi: 10.3109/00365529709011203 PMID: 9299672
-
(1997)
Scandinavian Journal of Gastroenterology
, vol.32
, Issue.9
, pp. 920-924
-
-
Lewis, S.J.1
Heaton, K.W.2
-
34
-
-
38849119091
-
Short health scale: A valid, reliable, and responsive instrument for subjective health assessment in Crohn's disease
-
PMID: 17828783
-
Stjernman H, Granno C, Jarnerot G, Ockander L, Tysk C, Blomberg B, et al. Short health scale: a valid, reliable, and responsive instrument for subjective health assessment in Crohn's disease. Inflammatory bowel diseases. 2008; 14(1):47-52. doi: 10.1002/ibd.20255 PMID: 17828783
-
(2008)
Inflammatory Bowel Diseases
, vol.14
, Issue.1
, pp. 47-52
-
-
Stjernman, H.1
Granno, C.2
Jarnerot, G.3
Ockander, L.4
Tysk, C.5
Blomberg, B.6
-
36
-
-
0000054097
-
Carbohydrate and lignin contents of plant materials used in animal feeding
-
Bach Knudsen KE. Carbohydrate and lignin contents of plant materials used in animal feeding. Anim Feed Sci Tecnol. 1997; 67(4):319-38. doi: 10.1016/S0377-8401(97)00009-6
-
(1997)
Anim Feed Sci Tecnol
, vol.67
, Issue.4
, pp. 319-338
-
-
Bach Knudsen, K.E.1
-
37
-
-
37049108995
-
Simplified method for the determination of total non-starch polysaccharides by gas-liquid chromatography of constituent sugars as alditol acetates
-
Englyst HN, Cummings JH. Simplified method for the determination of total non-starch polysaccharides by gas-liquid chromatography of constituent sugars as alditol acetates. Analyst. 1984; 109(7):937-42. doi: 10.1039/AN9840900937
-
(1984)
Analyst
, vol.109
, Issue.7
, pp. 937-942
-
-
Englyst, H.N.1
Cummings, J.H.2
-
38
-
-
84974251137
-
Microbial production of skatole in the hind gut of pigs given different diets and its relation to skatole deposition in backfat
-
Jensen MT, Cox RP, Jensen BB. Microbial production of skatole in the hind gut of pigs given different diets and its relation to skatole deposition in backfat. Animal Science. 1995; 61(02):293-304. doi: 10.1017/S1357729800013837
-
(1995)
Animal Science
, vol.61
, Issue.2
, pp. 293-304
-
-
Jensen, M.T.1
Cox, R.P.2
Jensen, B.B.3
-
39
-
-
84860483735
-
Next-generation sequencing reveals significant bacterial diversity of botrytized wine
-
PMID: 22563494
-
Bokulich NA, Joseph CM, Allen G, Benson AK, Mills DA. Next-generation sequencing reveals significant bacterial diversity of botrytized wine. PloS one. 2012; 7(5):e36357. doi: 10.1371/journal.pone.0036357 PMID: 22563494
-
(2012)
PloS One
, vol.7
, Issue.5
-
-
Bokulich, N.A.1
Joseph, C.M.2
Allen, G.3
Benson, A.K.4
Mills, D.A.5
-
40
-
-
84906489089
-
Analysis of raw goat milk microbiota: Impact of stage of lactation and lysozyme on microbial diversity
-
PMID: 25475275
-
McInnis EA, Kalanetra KM, Mills DA, Maga EA. Analysis of raw goat milk microbiota: impact of stage of lactation and lysozyme on microbial diversity. Food Microbiology. 2015; 46:121-31. doi: 10.1016/j.fm.2014.07.021 PMID: 25475275
-
(2015)
Food Microbiology
, vol.46
, pp. 121-131
-
-
McInnis, E.A.1
Kalanetra, K.M.2
Mills, D.A.3
Maga, E.A.4
-
41
-
-
77952243141
-
QIIME allows analysis of high-throughput community sequencing data
-
PMID: 20383131
-
Caporaso JG, Kuczynski J, Stombaugh J, Bittinger K, Bushman FD, Costello EK, et al. QIIME allows analysis of high-throughput community sequencing data. Nature methods. 2010; 7(5):335-6. doi: 10.1038/nmeth.f.303 PMID: 20383131
-
(2010)
Nature Methods
, vol.7
, Issue.5
, pp. 335-336
-
-
Caporaso, J.G.1
Kuczynski, J.2
Stombaugh, J.3
Bittinger, K.4
Bushman, F.D.5
Costello, E.K.6
-
42
-
-
33746061683
-
Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB
-
72/7/5069 [pii]. PMID: 16820507
-
DeSantis TZ, Hugenholtz P, Larsen N, Rojas M, Brodie EL, Keller K, et al. Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB. Applied and Environmental Microbiology. 2006; 72(7):5069-72. 72/7/5069 [pii]. PMID: 16820507
-
(2006)
Applied and Environmental Microbiology
, vol.72
, Issue.7
, pp. 5069-5072
-
-
DeSantis, T.Z.1
Hugenholtz, P.2
Larsen, N.3
Rojas, M.4
Brodie, E.L.5
Keller, K.6
-
43
-
-
77957244650
-
Search and clustering orders of magnitude faster than BLAST
-
Oxford, England)
-
Edgar RC. Search and clustering orders of magnitude faster than BLAST. Bioinformatics (Oxford, England). 2010; 26(19):2460-1. doi: 10.1093/bioinformatics/btq461
-
(2010)
Bioinformatics
, vol.26
, Issue.19
, pp. 2460-2461
-
-
Edgar, R.C.1
-
44
-
-
84871979584
-
Quality-filtering vastly improves diversity estimates from Illumina amplicon sequencing
-
PMID: 23202435
-
Bokulich NA, Subramanian S, Faith JJ, Gevers D, Gordon JI, Knight R, et al. Quality-filtering vastly improves diversity estimates from Illumina amplicon sequencing. Nature methods. 2013; 10(1):57-9. doi: 10.1038/nmeth.2276 PMID: 23202435
-
(2013)
Nature Methods
, vol.10
, Issue.1
, pp. 57-59
-
-
Bokulich, N.A.1
Subramanian, S.2
Faith, J.J.3
Gevers, D.4
Gordon, J.I.5
Knight, R.6
-
45
-
-
0026499429
-
Conservation evaluation and phylogenetic diversity
-
Faith DP. Conservation evaluation and phylogenetic diversity. Biological Conservation. 1992; 61(1):1-10. http://dx.doi.org/10.1016/0006-3207(92)91201-3.
-
(1992)
Biological Conservation
, vol.61
, Issue.1
, pp. 1-10
-
-
Faith, D.P.1
-
46
-
-
29144464937
-
UniFrac: A new phylogenetic method for comparing microbial communities
-
71/12/8228 [pii]. PMID: 16332807
-
Lozupone C, Knight R. UniFrac: a new phylogenetic method for comparing microbial communities. Applied and Environmental Microbiology. 2005; 71(12):8228-35. 71/12/8228 [pii]. PMID: 16332807
-
(2005)
Applied and Environmental Microbiology
, vol.71
, Issue.12
, pp. 8228-8235
-
-
Lozupone, C.1
Knight, R.2
-
47
-
-
0029816234
-
Colonic production of butyrate in patients with previous colonic cancer during long-term treatment with dietary fibre (Plantago ovata seeds)
-
PMID: 8898423
-
Nordgaard I, Hove H, Clausen MR, Mortensen PB. Colonic production of butyrate in patients with previous colonic cancer during long-term treatment with dietary fibre (Plantago ovata seeds). Scandinavian Journal of Gastroenterology. 1996; 31(10):1011-20. PMID: 8898423
-
(1996)
Scandinavian Journal of Gastroenterology
, vol.31
, Issue.10
, pp. 1011-1020
-
-
Nordgaard, I.1
Hove, H.2
Clausen, M.R.3
Mortensen, P.B.4
-
49
-
-
0033021536
-
Estimating sample sizes for continuous, binary, and ordinal outcomes in paired comparisons: Practical hints
-
Epub 1999/06/24. PMID: 10379691
-
Julious SA, Campbell MJ, Altman DG. Estimating sample sizes for continuous, binary, and ordinal outcomes in paired comparisons: practical hints. Journal of biopharmaceutical statistics. 1999; 9(2):241-51. Epub 1999/06/24. doi: 10.1081/bip-100101174 PMID: 10379691.
-
(1999)
Journal of Biopharmaceutical Statistics
, vol.9
, Issue.2
, pp. 241-251
-
-
Julious, S.A.1
Campbell, M.J.2
Altman, D.G.3
-
50
-
-
84979263050
-
-
cited 2015
-
Bland M. Cross-over trials https://www-users.york.ac.uk/~mb55/msc/trials/cross.htm2010 [cited 2015].
-
Cross-over Trials
-
-
Bland, M.1
-
52
-
-
84908233518
-
Impact of diet and individual variation on intestinal microbiota composition and fermentation products in obese men
-
PMID: 24763370
-
Salonen A, Lahti L, Salojarvi J, Holtrop G, Korpela K, Duncan SH, et al. Impact of diet and individual variation on intestinal microbiota composition and fermentation products in obese men. The ISME journal. 2014; 8(11):2218-30. doi: 10.1038/ismej.2014.63 PMID: 24763370
-
(2014)
The ISME Journal
, vol.8
, Issue.11
, pp. 2218-2230
-
-
Salonen, A.1
Lahti, L.2
Salojarvi, J.3
Holtrop, G.4
Korpela, K.5
Duncan, S.H.6
-
53
-
-
80053618114
-
Linking long-term dietary patterns with gut microbial enterotypes
-
New York, NY
-
Wu GD, Chen J, Hoffmann C, Bittinger K, Chen YY, Keilbaugh SA, et al. Linking long-term dietary patterns with gut microbial enterotypes. Science (New York, NY). 2011; 334(6052):105-8. doi: 10.1126/science.1208344
-
(2011)
Science
, vol.334
, Issue.6052
, pp. 105-108
-
-
Wu, G.D.1
Chen, J.2
Hoffmann, C.3
Bittinger, K.4
Chen, Y.Y.5
Keilbaugh, S.A.6
-
54
-
-
84912102518
-
Intestinal microbiota in health and disease: Role of bifidobacteria in gut homeostasis
-
Epub 2014/11/12. PMID: 25386066; PubMed Central PMCID: PMCPmc4223251
-
Tojo R, Suarez A, Clemente MG, de los Reyes-Gavilan CG, Margolles A, Gueimonde M, et al. Intestinal microbiota in health and disease: role of bifidobacteria in gut homeostasis. World J Gastroenterol. 2014; 20(41):15163-76. Epub 2014/11/12. doi: 10.3748/wjg.v20.i41.15163 PMID: 25386066; PubMed Central PMCID: PMCPmc4223251.
-
(2014)
World J Gastroenterol.
, vol.20
, Issue.41
, pp. 15163-15176
-
-
Tojo, R.1
Suarez, A.2
Clemente, M.G.3
De Los Reyes-Gavilan, C.G.4
Margolles, A.5
Gueimonde, M.6
-
55
-
-
84884529566
-
Impact of dietary fiber fermentation from cereal grains on metabolite production by the fecal microbiota from normal weight and obese individuals
-
PMID: 24044495
-
Yang J, Keshavarzian A, Rose DJ. Impact of dietary fiber fermentation from cereal grains on metabolite production by the fecal microbiota from normal weight and obese individuals. Journal of medicinal food. 2013; 16(9):862-7. doi: 10.1089/jmf.2012.0292 PMID: 24044495
-
(2013)
Journal of Medicinal Food
, vol.16
, Issue.9
, pp. 862-867
-
-
Yang, J.1
Keshavarzian, A.2
Rose, D.J.3
-
56
-
-
0022606848
-
Starch utilization by the human large intestinal microflora
-
PMID: 2423494
-
Macfarlane GT, Englyst HN. Starch utilization by the human large intestinal microflora. The Journal of applied bacteriology. 1986; 60(3):195-201. PMID: 2423494
-
(1986)
The Journal of Applied Bacteriology
, vol.60
, Issue.3
, pp. 195-201
-
-
Macfarlane, G.T.1
Englyst, H.N.2
-
57
-
-
84861138962
-
Selection of a Bifidobacterium animalis subsp. lactis strain with a decreased ability to produce acetic acid
-
PMID: 22389372
-
Margolles A, Sanchez B. Selection of a Bifidobacterium animalis subsp. lactis strain with a decreased ability to produce acetic acid. Applied and Environmental Microbiology. 2012; 78(9):3338-42. doi: 10.1128/AEM.00129-12 PMID: 22389372
-
(2012)
Applied and Environmental Microbiology
, vol.78
, Issue.9
, pp. 3338-3342
-
-
Margolles, A.1
Sanchez, B.2
-
58
-
-
85046982559
-
Acetate-producing bifidobacteria protect the host from enteropathogenic infection via carbohydrate transporters
-
21214 [pii]. PMID: 22825494
-
Fukuda S, Toh H, Taylor TD, Ohno H, Hattori M. Acetate-producing bifidobacteria protect the host from enteropathogenic infection via carbohydrate transporters. Gut microbes. 2012; 3(5):449-54. 21214 [pii]. PMID: 22825494
-
(2012)
Gut Microbes
, vol.3
, Issue.5
, pp. 449-454
-
-
Fukuda, S.1
Toh, H.2
Taylor, T.D.3
Ohno, H.4
Hattori, M.5
-
59
-
-
84920268198
-
Synergistic effects of Bifidobacterium thermophilum RBL67 and selected prebiotics on inhibition of Salmonella colonization in the swine proximal colon PolyFermS model
-
44-014-0044-y. eCollection 2014
-
Tanner SA, Chassard C, Zihler Berner A, Lacroix C. Synergistic effects of Bifidobacterium thermophilum RBL67 and selected prebiotics on inhibition of Salmonella colonization in the swine proximal colon PolyFermS model. Gut pathogens. 2014; 6(1):44-014-0044-y. eCollection 2014. doi: 10.1186/s13099-014-0044-y
-
(2014)
Gut Pathogens
, vol.6
, Issue.1
-
-
Tanner, S.A.1
Chassard, C.2
Zihler Berner, A.3
Lacroix, C.4
-
60
-
-
33646585117
-
Two routes of metabolic cross-feeding between Bifidobacterium adolescentis and butyrate-producing anaerobes from the human gut
-
72/5/3593 [pii]. PMID: 16672507
-
Belenguer A, Duncan SH, Calder AG, Holtrop G, Louis P, Lobley GE, et al. Two routes of metabolic cross-feeding between Bifidobacterium adolescentis and butyrate-producing anaerobes from the human gut. Applied and Environmental Microbiology. 2006; 72(5):3593-9. 72/5/3593 [pii]. PMID: 16672507
-
(2006)
Applied and Environmental Microbiology
, vol.72
, Issue.5
, pp. 3593-3599
-
-
Belenguer, A.1
Duncan, S.H.2
Calder, A.G.3
Holtrop, G.4
Louis, P.5
Lobley, G.E.6
-
61
-
-
84957930912
-
Enhanced butyrate formation by cross-feeding between Faecalibacterium prausnitzii and Bifidobacterium adolescentis
-
Epub 2015/10/01. PMID: 26420851
-
Rios-Covian D, Gueimonde M, Duncan SH, Flint HJ, de Los Reyes-Gavilan CG. Enhanced butyrate formation by cross-feeding between Faecalibacterium prausnitzii and Bifidobacterium adolescentis. FEMS microbiology letters. 2015. Epub 2015/10/01. doi: 10.1093/femsle/fnv176 PMID: 26420851.
-
(2015)
FEMS Microbiology Letters
-
-
Rios-Covian, D.1
Gueimonde, M.2
Duncan, S.H.3
Flint, H.J.4
De Los Reyes-Gavilan, C.G.5
-
62
-
-
3142628485
-
Contribution of acetate to butyrate formation by human faecal bacteria
-
PMID: 15182395
-
Duncan SH, Holtrop G, Lobley GE, Calder AG, Stewart CS, Flint HJ. Contribution of acetate to butyrate formation by human faecal bacteria. The British journal of nutrition. 2004; 91(6):915-23. doi: 10.1079/BJN20041150 PMID: 15182395
-
(2004)
The British Journal of Nutrition
, vol.91
, Issue.6
, pp. 915-923
-
-
Duncan, S.H.1
Holtrop, G.2
Lobley, G.E.3
Calder, A.G.4
Stewart, C.S.5
Flint, H.J.6
-
63
-
-
21244503098
-
Lactate is mainly fermented to butyrate by human intestinal microfloras but inter-individual variation is evident
-
Epub 2005/06/18. PMID: 15960680
-
Bourriaud C, Robins RJ, Martin L, Kozlowski F, Tenailleau E, Cherbut C, et al. Lactate is mainly fermented to butyrate by human intestinal microfloras but inter-individual variation is evident. Journal of applied microbiology. 2005; 99(1):201-12. Epub 2005/06/18. doi: 10.1111/j.1365-2672.2005.02605.x PMID: 15960680.
-
(2005)
Journal of Applied Microbiology
, vol.99
, Issue.1
, pp. 201-212
-
-
Bourriaud, C.1
Robins, R.J.2
Martin, L.3
Kozlowski, F.4
Tenailleau, E.5
Cherbut, C.6
-
64
-
-
78149283854
-
Mucolytic bacteria with increased prevalence in IBD mucosa augment in vitro utilization of mucin by other bacteria
-
PMID: 20648002
-
Png CW, Linden SK, Gilshenan KS, Zoetendal EG, McSweeney CS, Sly LI, et al. Mucolytic bacteria with increased prevalence in IBD mucosa augment in vitro utilization of mucin by other bacteria. The American Journal of Gastroenterology. 2010; 105(11):2420-8. doi: 10.1038/ajg.2010.281 PMID: 20648002
-
(2010)
The American Journal of Gastroenterology
, vol.105
, Issue.11
, pp. 2420-2428
-
-
Png, C.W.1
Linden, S.K.2
Gilshenan, K.S.3
Zoetendal, E.G.4
McSweeney, C.S.5
Sly, L.I.6
-
65
-
-
84878577965
-
An arabinoxylan-rich fraction from wheat enhances caecal fermentation and protects colonocyte DNA against diet-induced damage in pigs
-
PMID: 22115395
-
Belobrajdic DP, Bird AR, Conlon MA, Williams BA, Kang S, McSweeney CS, et al. An arabinoxylan-rich fraction from wheat enhances caecal fermentation and protects colonocyte DNA against diet-induced damage in pigs. The British journal of nutrition. 2012; 107(9):1274-82. doi: 10.1017/S0007114511004338 PMID: 22115395
-
(2012)
The British Journal of Nutrition
, vol.107
, Issue.9
, pp. 1274-1282
-
-
Belobrajdic, D.P.1
Bird, A.R.2
Conlon, M.A.3
Williams, B.A.4
Kang, S.5
McSweeney, C.S.6
-
66
-
-
70149123853
-
Misreporting of energy and micronutrient intake estimated by food records and 24 hour recalls, control and adjustment methods in practice
-
PMID: 19594967
-
Poslusna K, Ruprich J, de Vries JH, Jakubikova M, van't Veer P. Misreporting of energy and micronutrient intake estimated by food records and 24 hour recalls, control and adjustment methods in practice. The British journal of nutrition. 2009; 101 Suppl 2:S73-85. doi: 10.1017/S0007114509990602 PMID: 19594967
-
(2009)
The British Journal of Nutrition
, vol.101
, pp. S73-S85
-
-
Poslusna, K.1
Ruprich, J.2
De Vries, J.H.3
Jakubikova, M.4
Van't Veer, P.5
-
67
-
-
84899985581
-
Adherence to the Nordic Nutrition Recommendations in a Nordic population with metabolic syndrome: High salt consumption and low dietary fibre intake (The SYSDIET study)
-
Jonsdottir SE, Brader L, Gunnarsdottir I, Kally Magnusdottir O, Schwab U, Kolehmainen M, et al. Adherence to the Nordic Nutrition Recommendations in a Nordic population with metabolic syndrome: high salt consumption and low dietary fibre intake (The SYSDIET study). Food & nutrition research. 2013; 57: doi: 10.3402/fnr.v57i0.21391
-
(2013)
Food & Nutrition Research
, vol.57
-
-
Jonsdottir, S.E.1
Brader, L.2
Gunnarsdottir, I.3
Kally Magnusdottir, O.4
Schwab, U.5
Kolehmainen, M.6
-
68
-
-
37149022209
-
Review article: The role of butyrate on colonic function
-
Hamer HM, Jonkers D, Venema K, Vanhoutvin S, Troost FJ, Brummer RJ. Review article: the role of butyrate on colonic function. Alimentary Pharmacology & Therapeutics. 2008; 27(2):104-19. doi: 10.1111/j.1365-2036.2007.03562.x
-
(2008)
Alimentary Pharmacology & Therapeutics
, vol.27
, Issue.2
, pp. 104-119
-
-
Hamer, H.M.1
Jonkers, D.2
Venema, K.3
Vanhoutvin, S.4
Troost, F.J.5
Brummer, R.J.6
-
69
-
-
0037445321
-
Fluorescent hybridisation combined with flow cytometry and hybridisation of total RNA to analyse the composition of microbial communities in human faeces using 16S rRNA probes
-
PMID: 19719684
-
Rigottier-Gois L, Bourhis AG, Gramet G, Rochet V, Dore J. Fluorescent hybridisation combined with flow cytometry and hybridisation of total RNA to analyse the composition of microbial communities in human faeces using 16S rRNA probes. FEMS microbiology ecology. 2003; 43(2):237-45. doi: 10.1111/j.1574-6941.2003.tb01063.x PMID: 19719684
-
(2003)
FEMS Microbiology Ecology
, vol.43
, Issue.2
, pp. 237-245
-
-
Rigottier-Gois, L.1
Bourhis, A.G.2
Gramet, G.3
Rochet, V.4
Dore, J.5
-
70
-
-
0025890074
-
Iso- and anteiso-fatty acids in bacteria: Biosynthesis, function, and taxonomic significance
-
PMID: 1886522
-
Kaneda T. Iso- and anteiso-fatty acids in bacteria: biosynthesis, function, and taxonomic significance. Microbiological reviews. 1991; 55(2):288-302. PMID: 1886522
-
(1991)
Microbiological Reviews
, vol.55
, Issue.2
, pp. 288-302
-
-
Kaneda, T.1
-
71
-
-
0030032123
-
Digestion and physiological properties of resistant starch in the human large bowel
-
PMID: 8695600
-
Cummings JH, Beatty ER, Kingman SM, Bingham SA, Englyst HN. Digestion and physiological properties of resistant starch in the human large bowel. The British journal of nutrition. 1996; 75(5):733-47. PMID: 8695600
-
(1996)
The British Journal of Nutrition
, vol.75
, Issue.5
, pp. 733-747
-
-
Cummings, J.H.1
Beatty, E.R.2
Kingman, S.M.3
Bingham, S.A.4
Englyst, H.N.5
|