-
1
-
-
84857515422
-
Good vibrations in enzyme-catalysed reactions
-
S. Hay, and N.S. Scrutton Good vibrations in enzyme-catalysed reactions Nat. Chem. 4 2012 161 168
-
(2012)
Nat. Chem.
, vol.4
, pp. 161-168
-
-
Hay, S.1
Scrutton, N.S.2
-
2
-
-
84875665271
-
Hydrogen tunneling links protein dynamics to enzyme catalysis
-
J.P. Klinman, and A. Kohen Hydrogen tunneling links protein dynamics to enzyme catalysis Annu. Rev. Biochem. 82 2013 471 496
-
(2013)
Annu. Rev. Biochem.
, vol.82
, pp. 471-496
-
-
Klinman, J.P.1
Kohen, A.2
-
3
-
-
72249089538
-
Evidence to support the hypothesis that promoting vibrations enhance the rate of an enzyme catalyzed H-tunneling reaction
-
C.R. Pudney, S. Hay, C. Levy, J. Pang, M.J. Sutcliffe, D. Leys, and N.S. Scrutton Evidence to support the hypothesis that promoting vibrations enhance the rate of an enzyme catalyzed H-tunneling reaction J. Am. Chem. Soc. 131 2009 17072 17073
-
(2009)
J. Am. Chem. Soc.
, vol.131
, pp. 17072-17073
-
-
Pudney, C.R.1
Hay, S.2
Levy, C.3
Pang, J.4
Sutcliffe, M.J.5
Leys, D.6
Scrutton, N.S.7
-
4
-
-
84882381245
-
Changes in protein architecture and subpicosecond protein dynamics impact the reaction catalyzed by lactate dehydrogenase
-
J.E. Masterson, and S.D. Schwartz Changes in protein architecture and subpicosecond protein dynamics impact the reaction catalyzed by lactate dehydrogenase J. Phys. Chem. A 117 2013 7107 7113
-
(2013)
J. Phys. Chem. A
, vol.117
, pp. 7107-7113
-
-
Masterson, J.E.1
Schwartz, S.D.2
-
5
-
-
77951226274
-
At the dawn of the 21st century: Is dynamics the missing link for understanding enzyme catalysis
-
S.C.L. Kamerlin, and A. Warshel At the dawn of the 21st century: is dynamics the missing link for understanding enzyme catalysis Proteins Struct. Funct. Bioinformatics 78 2010 1339 1375
-
(2010)
Proteins Struct. Funct. Bioinformatics
, vol.78
, pp. 1339-1375
-
-
Kamerlin, S.C.L.1
Warshel, A.2
-
6
-
-
84857542642
-
Taking Ockham's razor to enzyme dynamics and catalysis
-
D.R. Glowacki, J.N. Harvey, and A.J. Mulholland Taking Ockham's razor to enzyme dynamics and catalysis Nat. Chem. 4 2012 169 176
-
(2012)
Nat. Chem.
, vol.4
, pp. 169-176
-
-
Glowacki, D.R.1
Harvey, J.N.2
Mulholland, A.J.3
-
8
-
-
38049031723
-
The effect of temperature on enzyme activity: New insights and their implications
-
R.M. Daniel, M.J. Danson, R. Eisenthal, C.K. Lee, and M.E. Peterson The effect of temperature on enzyme activity: new insights and their implications Extremophiles 12 2008 51 59
-
(2008)
Extremophiles
, vol.12
, pp. 51-59
-
-
Daniel, R.M.1
Danson, M.J.2
Eisenthal, R.3
Lee, C.K.4
Peterson, M.E.5
-
9
-
-
79955667790
-
On the curvature in logarithmic plots of rate coefficients for chemical reactions
-
C. Canepa On the curvature in logarithmic plots of rate coefficients for chemical reactions Chem. Central J. 5 2011 22
-
(2011)
Chem. Central J.
, vol.5
, pp. 22
-
-
Canepa, C.1
-
10
-
-
84887925011
-
Change in heat capacity for enzyme catalysis determines temperature dependence of enzyme catalyzed rates
-
J.K. Hobbs, W. Jiao, A.D. Easter, E.J. Parker, L.a. Schipper, and V.L. Arcus Change in heat capacity for enzyme catalysis determines temperature dependence of enzyme catalyzed rates ACS Chem. Biol. 8 2013 2388 2393
-
(2013)
ACS Chem. Biol.
, vol.8
, pp. 2388-2393
-
-
Hobbs, J.K.1
Jiao, W.2
Easter, A.D.3
Parker, E.J.4
Schipper, L.A.5
Arcus, V.L.6
-
11
-
-
84907867829
-
Thermodynamic theory explains the temperature optima of soil microbial processes and high Q10 values at low temperatures
-
L.a. Schipper, J.K. Hobbs, S. Rutledge, and V.L. Arcus Thermodynamic theory explains the temperature optima of soil microbial processes and high Q10 values at low temperatures Global Change Biol. 2014 1 9
-
(2014)
Global Change Biol.
, pp. 1-9
-
-
Schipper, L.A.1
Hobbs, J.K.2
Rutledge, S.3
Arcus, V.L.4
-
13
-
-
0033945087
-
The role of backbone conformational heat capacity in protein stability: Temperature dependent dynamics of the B1 domain of Streptococcal protein G
-
M.J. Seewald, K. Pichumani, C. Stowell, B.V. Tibbals, L. Regan, and M.J. Stone The role of backbone conformational heat capacity in protein stability: temperature dependent dynamics of the B1 domain of Streptococcal protein G Protein Sci. 9 2000 1177 1193
-
(2000)
Protein Sci.
, vol.9
, pp. 1177-1193
-
-
Seewald, M.J.1
Pichumani, K.2
Stowell, C.3
Tibbals, B.V.4
Regan, L.5
Stone, M.J.6
-
14
-
-
0037012441
-
Identification of a protein-promoting vibration in the reaction catalyzed by horse liver alcohol dehydrogenase
-
S. Caratzoulas, J.S. Mincer, and S.D. Schwartz Identification of a protein-promoting vibration in the reaction catalyzed by horse liver alcohol dehydrogenase J. Am. Chem. Soc. 124 2002 3270 3276
-
(2002)
J. Am. Chem. Soc.
, vol.124
, pp. 3270-3276
-
-
Caratzoulas, S.1
Mincer, J.S.2
Schwartz, S.D.3
-
15
-
-
84885351843
-
Unraveling the role of protein dynamics in dihydrofolate reductase catalysis
-
L.Y.P. Luk, J.J. Ruiz-Pernía, W.M. Dawson, M. Roca, E.J. Loveridge, D.R. Glowacki, J.N. Harvey, A.J. Mulholland, I. Tuñón, V. Moliner, and R.K. Allemann Unraveling the role of protein dynamics in dihydrofolate reductase catalysis Proc. Natl. Acad. Sci. 110 2013 16344 16349
-
(2013)
Proc. Natl. Acad. Sci.
, vol.110
, pp. 16344-16349
-
-
Luk, L.Y.P.1
Ruiz-Pernía, J.J.2
Dawson, W.M.3
Roca, M.4
Loveridge, E.J.5
Glowacki, D.R.6
Harvey, J.N.7
Mulholland, A.J.8
Tuñón, I.9
Moliner, V.10
Allemann, R.K.11
-
16
-
-
33645801770
-
Atomic description of an enzyme reaction dominated by proton tunneling
-
L. Masgrau, A. Roujeinikova, L.O. Johannissen, P. Hothi, J. Basran, K.E. Ranaghan, A.J. Mulholland, M.J. Sutcliffe, N.S. Scrutton, and D. Leys Atomic description of an enzyme reaction dominated by proton tunneling Science 312 2006 237 241
-
(2006)
Science
, vol.312
, pp. 237-241
-
-
Masgrau, L.1
Roujeinikova, A.2
Johannissen, L.O.3
Hothi, P.4
Basran, J.5
Ranaghan, K.E.6
Mulholland, A.J.7
Sutcliffe, M.J.8
Scrutton, N.S.9
Leys, D.10
-
17
-
-
34047264783
-
Proton tunneling in aromatic amine dehydrogenase is driven by a short-range sub-picosecond promoting vibration: Consistency of simulation and theory with experiment
-
L.O. Johannissen, S. Hay, N.S. Scrutton, and M.J. Sutcliffe Proton tunneling in aromatic amine dehydrogenase is driven by a short-range sub-picosecond promoting vibration: consistency of simulation and theory with experiment J. Phys. Chem. B 111 2007 2631 2638
-
(2007)
J. Phys. Chem. B
, vol.111
, pp. 2631-2638
-
-
Johannissen, L.O.1
Hay, S.2
Scrutton, N.S.3
Sutcliffe, M.J.4
-
18
-
-
79951913324
-
How does pressure affect barrier compression and isotope effects in an enzymatic hydrogen tunneling reaction?
-
L.O. Johannissen, N.S. Scrutton, and M.J. Sutcliffe How does pressure affect barrier compression and isotope effects in an enzymatic hydrogen tunneling reaction? Angew. Chem. - Int. Ed. 50 2011 2129 2132
-
(2011)
Angew. Chem. - Int. Ed.
, vol.50
, pp. 2129-2132
-
-
Johannissen, L.O.1
Scrutton, N.S.2
Sutcliffe, M.J.3
-
19
-
-
33846307373
-
Promoting motions in enzyme catalysis probed by pressure studies of kinetic isotope effects
-
S. Hay, M.J. Sutcliffe, and N.S. Scrutton Promoting motions in enzyme catalysis probed by pressure studies of kinetic isotope effects Proc. Natl. Acad. Sci. U.S.A. 104 2007 507 512
-
(2007)
Proc. Natl. Acad. Sci. U.S.A.
, vol.104
, pp. 507-512
-
-
Hay, S.1
Sutcliffe, M.J.2
Scrutton, N.S.3
-
20
-
-
33846085642
-
Enzyme dynamics and tunneling enhanced by compression in the hydrogen abstraction catalyzed by soybean lipoxygenase-1
-
I. Tejero, M. Garcia-Viloca, À. González-Lafont, J.M. Lluch, and D.M. York Enzyme dynamics and tunneling enhanced by compression in the hydrogen abstraction catalyzed by soybean lipoxygenase-1 J. Phys. Chem. B 110 2006 24708 24719
-
(2006)
J. Phys. Chem. B
, vol.110
, pp. 24708-24719
-
-
Tejero, I.1
Garcia-Viloca, M.2
González-Lafont À.3
Lluch, J.M.4
York, D.M.5
-
21
-
-
2342448523
-
Rate-promoting vibrations and coupled hydrogen-electron transfer reactions in the condensed phase: A model for enzymatic catalysis
-
J.S. Mincer, and S.D. Schwartz Rate-promoting vibrations and coupled hydrogen-electron transfer reactions in the condensed phase: a model for enzymatic catalysis J. Chem. Phys. 120 2004 7755 7760
-
(2004)
J. Chem. Phys.
, vol.120
, pp. 7755-7760
-
-
Mincer, J.S.1
Schwartz, S.D.2
-
23
-
-
0033537697
-
Enzymatic H-transfer requires vibration-driven extreme tunneling
-
J. Basran, M.J. Sutcliffe, and N.S. Scrutton Enzymatic H-transfer requires vibration-driven extreme tunneling Biochemistry 38 1999 3218 3222
-
(1999)
Biochemistry
, vol.38
, pp. 3218-3222
-
-
Basran, J.1
Sutcliffe, M.J.2
Scrutton, N.S.3
-
24
-
-
84892569667
-
Proton tunnelling and promoting vibrations during the oxidation of ascorbate by ferricyanide?
-
S.M. Kandathil, M.D. Driscoll, R.V. Dunn, N.S. Scrutton, and S. Hay Proton tunnelling and promoting vibrations during the oxidation of ascorbate by ferricyanide? Phys. Chem. Chem. Phys. 16 2014 2256 2259
-
(2014)
Phys. Chem. Chem. Phys.
, vol.16
, pp. 2256-2259
-
-
Kandathil, S.M.1
Driscoll, M.D.2
Dunn, R.V.3
Scrutton, N.S.4
Hay, S.5
-
25
-
-
84874083777
-
Fast protein motions are coupled to enzyme H-transfer reactions
-
C.R. Pudney, A. Guerriero, N.J. Baxter, L.O. Johannissen, J.P. Waltho, S. Hay, and N.S. Scrutton Fast protein motions are coupled to enzyme H-transfer reactions J. Am. Chem. Soc. 135 2013 2512 2517
-
(2013)
J. Am. Chem. Soc.
, vol.135
, pp. 2512-2517
-
-
Pudney, C.R.1
Guerriero, A.2
Baxter, N.J.3
Johannissen, L.O.4
Waltho, J.P.5
Hay, S.6
Scrutton, N.S.7
-
26
-
-
77955581308
-
Direct analysis of donor-acceptor distance and relationship to isotope effects and the force constant for barrier compression in enzymatic H-tunneling reactions
-
C.R. Pudney, L.O. Johannissen, M.J. Sutcliffe, S. Hay, and N.S. Scrutton Direct analysis of donor-acceptor distance and relationship to isotope effects and the force constant for barrier compression in enzymatic H-tunneling reactions J. Am. Chem. Soc. 132 2010 11329 11335
-
(2010)
J. Am. Chem. Soc.
, vol.132
, pp. 11329-11335
-
-
Pudney, C.R.1
Johannissen, L.O.2
Sutcliffe, M.J.3
Hay, S.4
Scrutton, N.S.5
-
27
-
-
44449093622
-
Deep tunneling dominates the biologically important hydride transfer reaction from NADH to FMN in morphinone reductase
-
J. Pang, S. Hay, N.S. Scrutton, and M.J. Sutcliffe Deep tunneling dominates the biologically important hydride transfer reaction from NADH to FMN in morphinone reductase J. Am. Chem. Soc. 130 2008 7092 7097
-
(2008)
J. Am. Chem. Soc.
, vol.130
, pp. 7092-7097
-
-
Pang, J.1
Hay, S.2
Scrutton, N.S.3
Sutcliffe, M.J.4
-
28
-
-
0037123216
-
Temperature-dependent isotope effects in soybean Lipoxygenase-1: Correlating hydrogen tunneling with protein dynamics
-
M.J. Knapp, K. Rickert, and J.P. Klinman Temperature-dependent isotope effects in soybean Lipoxygenase-1: correlating hydrogen tunneling with protein dynamics J. Am. Chem. Soc. 124 2002 3865 3874
-
(2002)
J. Am. Chem. Soc.
, vol.124
, pp. 3865-3874
-
-
Knapp, M.J.1
Rickert, K.2
Klinman, J.P.3
-
29
-
-
83755168786
-
The role of large-scale motions in catalysis by dihydrofolate reductase
-
E.J. Loveridge, L.H. Tey, E.M. Behiry, W.M. Dawson, R.M. Evans, S.B.M. Whittaker, U.L. Günther, C. Williams, M.P. Crump, and R.K. Allemann The role of large-scale motions in catalysis by dihydrofolate reductase J. Am. Chem. Soc. 133 2011 20561 20570
-
(2011)
J. Am. Chem. Soc.
, vol.133
, pp. 20561-20570
-
-
Loveridge, E.J.1
Tey, L.H.2
Behiry, E.M.3
Dawson, W.M.4
Evans, R.M.5
Whittaker, S.B.M.6
Günther, U.L.7
Williams, C.8
Crump, M.P.9
Allemann, R.K.10
-
30
-
-
0037414270
-
Effect of mutation on enzyme motion in dihydrofolate reductase
-
J.B. Watney, P.K. Agarwal, and S. Hammes-Schiffer Effect of mutation on enzyme motion in dihydrofolate reductase J. Am. Chem. Soc. 125 2003 3745 3750
-
(2003)
J. Am. Chem. Soc.
, vol.125
, pp. 3745-3750
-
-
Watney, J.B.1
Agarwal, P.K.2
Hammes-Schiffer, S.3
-
31
-
-
84861887134
-
Barrier crossing in dihydrofolate reductase does not involve a rate-promoting vibration
-
M. Dametto, D. Antoniou, and S.D. Schwartz Barrier crossing in dihydrofolate reductase does not involve a rate-promoting vibration Mol. Phys. 110 2012 531 536
-
(2012)
Mol. Phys.
, vol.110
, pp. 531-536
-
-
Dametto, M.1
Antoniou, D.2
Schwartz, S.D.3
-
32
-
-
32944457660
-
Coupling of protein motions and hydrogen transfer during catalysis by Escherichia coli dihydrofolate reductase
-
R.S. Swanwick, G. Maglia, L. Tey, and R.K. Allemann Coupling of protein motions and hydrogen transfer during catalysis by Escherichia coli dihydrofolate reductase Biochem. J. 394 2006 259 265
-
(2006)
Biochem. J.
, vol.394
, pp. 259-265
-
-
Swanwick, R.S.1
Maglia, G.2
Tey, L.3
Allemann, R.K.4
-
33
-
-
0035940450
-
Contributions of valine-292 in the nicotinamide binding site of liver alcohol dehydrogenase and dynamics to catalysis
-
J.K. Rubach, S. Ramaswamy, and B.V. Plapp Contributions of valine-292 in the nicotinamide binding site of liver alcohol dehydrogenase and dynamics to catalysis Biochemistry 40 2001 12686 12694
-
(2001)
Biochemistry
, vol.40
, pp. 12686-12694
-
-
Rubach, J.K.1
Ramaswamy, S.2
Plapp, B.V.3
-
34
-
-
84919934356
-
Escherichia coli dihydrofolate reductase catalyzed proton and hydride transfers: Temporal order and the roles of Asp27 and Tyr100
-
C.T. Liu, K. Francis, J.P. Layfield, X. Huang, S. Hammes-Schiffer, A. Kohen, and S.J. Benkovic Escherichia coli dihydrofolate reductase catalyzed proton and hydride transfers: temporal order and the roles of Asp27 and Tyr100 Proc. Natl. Acad. Sci. U.S.A. 111 2014 18231 18236
-
(2014)
Proc. Natl. Acad. Sci. U.S.A.
, vol.111
, pp. 18231-18236
-
-
Liu, C.T.1
Francis, K.2
Layfield, J.P.3
Huang, X.4
Hammes-Schiffer, S.5
Kohen, A.6
Benkovic, S.J.7
-
35
-
-
0024573393
-
Hydrogen tunneling in enzyme reactions
-
Y. Cha, C.J. Murray, and J.P. Klinman Hydrogen tunneling in enzyme reactions Science 243 1989 1325 1330
-
(1989)
Science
, vol.243
, pp. 1325-1330
-
-
Cha, Y.1
Murray, C.J.2
Klinman, J.P.3
-
36
-
-
84878295486
-
Isotope effects as probes for enzyme catalyzed hydrogen-transfer reactions
-
D. Roston, Z. Islam, and A. Kohen Isotope effects as probes for enzyme catalyzed hydrogen-transfer reactions Molecules 18 2013 5543 5567
-
(2013)
Molecules
, vol.18
, pp. 5543-5567
-
-
Roston, D.1
Islam, Z.2
Kohen, A.3
-
37
-
-
84938127322
-
-
Hay, S., Johannissen, L.O., Hothi, P., Sutcli, M.J., Scrutton, N.S., 2012. Pressure effects on enzyme-catalyzed quantum tunneling events arise from protein-specific structural and dynamic changes.
-
(2012)
Pressure Effects on Enzyme-catalyzed Quantum Tunneling Events Arise from Protein-specific Structural and Dynamic Changes
-
-
Hay, S.1
Johannissen, L.O.2
Hothi, P.3
Sutcli, M.J.4
Scrutton, N.S.5
-
38
-
-
81755172909
-
Femtosecond dynamics coupled to chemical barrier crossing in a Born-Oppenheimer enzyme
-
R.G. Silva, a.S. Murkin, and V.L. Schramm Femtosecond dynamics coupled to chemical barrier crossing in a Born-Oppenheimer enzyme Proc. Natl. Acad. Sci. U.S.A. 108 2011 18661 18665
-
(2011)
Proc. Natl. Acad. Sci. U.S.A.
, vol.108
, pp. 18661-18665
-
-
Silva, R.G.1
Murkin, A.S.2
Schramm, V.L.3
-
39
-
-
84874050462
-
Heavy-enzyme kinetic isotope effects on proton transfer in alanine racemase
-
M.D. Toney, J.N. Castro, and T.a. Addington Heavy-enzyme kinetic isotope effects on proton transfer in alanine racemase J. Am. Chem. Soc. 135 2013 2509 2511
-
(2013)
J. Am. Chem. Soc.
, vol.135
, pp. 2509-2511
-
-
Toney, M.D.1
Castro, J.N.2
Addington, T.A.3
-
40
-
-
84874965614
-
Enzymatic single-molecule kinetic isotope effects
-
C.R. Pudney, R.S.K. Lane, A.J. Fielding, S.W. Magennis, S. Hay, and N.S. Scrutton Enzymatic single-molecule kinetic isotope effects J. Am. Chem. Soc. 135 2013 3855 3864
-
(2013)
J. Am. Chem. Soc.
, vol.135
, pp. 3855-3864
-
-
Pudney, C.R.1
Lane, R.S.K.2
Fielding, A.J.3
Magennis, S.W.4
Hay, S.5
Scrutton, N.S.6
-
41
-
-
33750434286
-
Alpha-secondary isotope effects as probes of "tunneling-ready" configurations in enzymatic H-tunneling: Insight from environmentally coupled tunneling models
-
C.R. Pudney, S. Hay, M.J. Sutcliffe, and N.S. Scrutton Alpha-secondary isotope effects as probes of "tunneling-ready" configurations in enzymatic H-tunneling: insight from environmentally coupled tunneling models J. Am. Chem. Soc. 128 2006 14053 14058
-
(2006)
J. Am. Chem. Soc.
, vol.128
, pp. 14053-14058
-
-
Pudney, C.R.1
Hay, S.2
Sutcliffe, M.J.3
Scrutton, N.S.4
-
42
-
-
0035970089
-
Convex Arrhenius plots and their interpretation
-
D. Truhlar, and a. Kohen Convex Arrhenius plots and their interpretation Proc. Natl. Acad. Sci. U.S.A. 98 2001 848 851
-
(2001)
Proc. Natl. Acad. Sci. U.S.A.
, vol.98
, pp. 848-851
-
-
Truhlar, D.1
Kohen, A.2
-
43
-
-
33748367252
-
Arrhenius curves of hydrogen transfers: Tunnel effects, isotope effects and effects of pre-equilibria
-
H.-H. Limbach, J. Miguel Lopez, and A. Kohen Arrhenius curves of hydrogen transfers: tunnel effects, isotope effects and effects of pre-equilibria Philos. Trans. R. Soc. Lond. B 361 2006 1399 1415
-
(2006)
Philos. Trans. R. Soc. Lond. B
, vol.361
, pp. 1399-1415
-
-
Limbach, H.-H.1
Miguel Lopez, J.2
Kohen, A.3
-
44
-
-
34548435241
-
Analysis of classical and quantum paths for deprotonation of methylamine by methylamine dehydrogenase
-
K.E. Ranaghan, L. Masgrau, N.S. Scrutton, M.J. Sutcliffe, and A.J. Mulholland Analysis of classical and quantum paths for deprotonation of methylamine by methylamine dehydrogenase ChemPhysChem 8 2007 1816 1835
-
(2007)
ChemPhysChem
, vol.8
, pp. 1816-1835
-
-
Ranaghan, K.E.1
Masgrau, L.2
Scrutton, N.S.3
Sutcliffe, M.J.4
Mulholland, A.J.5
-
45
-
-
84867796644
-
Temperature invariance of the nitrogenase electron transfer mechanism
-
D. Mayweather, K. Danyal, D.R. Dean, L.C. Seefeldt, and B.M. Hoffman Temperature invariance of the nitrogenase electron transfer mechanism Biochemistry 51 2012 8391 8398
-
(2012)
Biochemistry
, vol.51
, pp. 8391-8398
-
-
Mayweather, D.1
Danyal, K.2
Dean, D.R.3
Seefeldt, L.C.4
Hoffman, B.M.5
|