Large-scale quality analysis of published ChIP-seq data

G3: Genes, Genomes, Genetics

Volumn 4, Issue 2, 2014, Pages 209-223

  Marinov, Georgi K ^a   Kundaje, Anshul ^e,f,g   Park, Peter J ^b,c,d   Wold, Barbara J ^a  

^a CALIFORNIA INSTITUTE OF TECHNOLOGY   (United States)

^b Harvard Medical School Center for Biomedical Informatics   (United States)

^c BOSTON CHILDREN S HOSPITAL   (United States)

^d BRIGHAM AND WOMEN S HOSPITAL   (United States)

^e MASSACHUSETTS INSTITUTE OF TECHNOLOGY   (United States)

^f BROAD INSTITUTE OF MIT AND HARVARD   (United States)

^g Stanford University   (United States)

Author keywords

ChIP seq; Chromatin immunoprecipitation; Cross correlation; Quality assessment; Transcription factor

Indexed keywords

IMMUNOGLOBULIN G; RNA POLYMERASE II;

ANIMAL EXPERIMENT; ARTICLE; BINDING SITE; CHROMATIN IMMUNOPRECIPITATION; CONTROLLED STUDY; CORRELATION ANALYSIS; DNA BINDING; HISTONE MODIFICATION; HUMAN; MOUSE; NONHUMAN; PROTEIN ANALYSIS; QUALITY CONTROL;

CHIP-SEQ; CHROMATIN IMMUNOPRECIPITATION; CROSS-CORRELATION; QUALITY ASSESSMENT; TRANSCRIPTION FACTOR;

ANIMALS; CHROMATIN IMMUNOPRECIPITATION; DATA INTERPRETATION, STATISTICAL; DATABASES, GENETIC; HIGH-THROUGHPUT NUCLEOTIDE SEQUENCING; MYOD PROTEIN; QUALITY CONTROL; SEQUENCE ANALYSIS, DNA; TRANSCRIPTION FACTORS;

EID: 84894573097     PISSN: None     EISSN: 21601836     Source Type: Journal    
DOI: 10.1534/g3.113.008680     Document Type: Article

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