-
1
-
-
34848834842
-
RAR and RXR modulation in cancer and metabolic disease
-
DOI 10.1038/nrd2397, PII NRD2397
-
Altucci L, Leibowitz MD, Ogilvie KM, de Lera AR, Gronemeyer H (2007) RAR and RXR modulation in cancer and metabolic disease. Nat Rev Drug Discov 6: 793-810 (Pubitemid 47504871)
-
(2007)
Nature Reviews Drug Discovery
, vol.6
, Issue.10
, pp. 793-810
-
-
Altucci, L.1
Leibowitz, M.D.2
Ogilvie, K.M.3
De Lera, A.R.4
Gronemeyer, H.5
-
3
-
-
39149083060
-
Retinoic acid increases aquaporin 3 expression in normal human skin
-
DOI 10.1038/sj.jid.5701047, PII 5701047
-
Bellemere G, Von Stetten O, Oddos T (2008) Retinoic acid increases aquaporin 3 expression in normal human skin. J Invest Dermatol 128: 542-548 (Pubitemid 351252654)
-
(2008)
Journal of Investigative Dermatology
, vol.128
, Issue.3
, pp. 542-548
-
-
Bellemere, G.1
Von Stetten, O.2
Oddos, T.3
-
4
-
-
34247887724
-
Elevating the levels of Sox2 in embryonal carcinoma cells and embryonic stem cells inhibits the expression of Sox2:Oct-3/4 target genes
-
DOI 10.1093/nar/gkm059
-
Boer B, Kopp J, Mallanna S, Desler M, Chakravarthy H, Wilder PJ, Bernadt C, Rizzino A (2007) Elevating the levels of Sox2 in embryonal carcinoma cells and embryonic stem cells inhibits the expression of Sox2:Oct-3/4 target genes. Nucleic Acids Res 35: 1773-1786 (Pubitemid 47061649)
-
(2007)
Nucleic Acids Research
, vol.35
, Issue.6
, pp. 1773-1786
-
-
Boer, B.1
Kopp, J.2
Mallanna, S.3
Desler, M.4
Chakravarthy, H.5
Wilder, P.J.6
Bernadt, C.7
Rizzino, A.8
-
5
-
-
40949160973
-
All-trans retinoic acid attenuates ultraviolet radiation-induced down-regulation of aquaporin-3 and water permeability in human keratinocytes
-
DOI 10.1002/jcp.21336
-
Cao C, Wan S, Jiang Q, Amaral A, Lu S, Hu G, Bi Z, Kouttab N, Chu W, Wan Y (2008) All-trans retinoic acid attenuates ultraviolet radiation-induced down-regulation of aquaporin-3 and water permeability in human keratinocytes. J Cell Physiol 215: 506-516 (Pubitemid 351468963)
-
(2008)
Journal of Cellular Physiology
, vol.215
, Issue.2
, pp. 506-516
-
-
Cao, C.1
Wan, S.2
Jiang, Q.3
Amaral, A.4
Lu, S.5
Hu, G.6
Bi, Z.7
Kouttab, N.8
Chu, W.9
Wan, Y.10
-
6
-
-
22144486551
-
Chromosome-wide mapping of estrogen receptor binding reveals long-range regulation requiring the forkhead protein FoxA1
-
DOI 10.1016/j.cell.2005.05.008, PII S0092867405004538
-
Carroll JS, Liu XS, Brodsky AS, Li W, Meyer CA, Szary AJ, Eeckhoute J, Shao W, Hestermann EV, Geistlinger TR, Fox EA, Silver PA, Brown M (2005) Chromosome-wide mapping of estrogen receptor binding reveals long-range regulation requiring the forkhead protein FoxA1. Cell 122: 33-43 (Pubitemid 40977938)
-
(2005)
Cell
, vol.122
, Issue.1
, pp. 33-43
-
-
Carroll, J.S.1
Liu, X.S.2
Brodsky, A.S.3
Li, W.4
Meyer, C.A.5
Szary, A.J.6
Eeckhoute, J.7
Shao, W.8
Hestermann, E.V.9
Geistlinger, T.R.10
Fox, E.A.11
Silver, P.A.12
Brown, M.13
-
7
-
-
33750442923
-
Genome-wide analysis of estrogen receptor binding sites
-
DOI 10.1038/ng1901, PII NG1901
-
Carroll JS, Meyer CA, Song J, Li W, Geistlinger TR, Eeckhoute J, Brodsky AS, Keeton EK, Fertuck KC, Hall GF, Wang Q, Bekiranov S, Sementchenko V, Fox EA, Silver PA, Gingeras TR, Liu XS, Brown M (2006) Genome-wide analysis of estrogen receptor binding sites. Nat Genet 38: 1289-1297 (Pubitemid 44646291)
-
(2006)
Nature Genetics
, vol.38
, Issue.11
, pp. 1289-1297
-
-
Carroll, J.S.1
Meyer, C.A.2
Song, J.3
Li, W.4
Geistlinger, T.R.5
Eeckhoute, J.6
Brodsky, A.S.7
Keeton, E.K.8
Fertuck, K.C.9
Hall, G.F.10
Wang, Q.11
Bekiranov, S.12
Sementchenko, V.13
Fox, E.A.14
Silver, P.A.15
Gingeras, T.R.16
Liu, X.S.17
Brown, M.18
-
8
-
-
21444443478
-
MatInspector and beyond: Promoter analysis based on transcription factor binding sites
-
DOI 10.1093/bioinformatics/bti473
-
Cartharius K, Frech K, Grote K, Klocke B, Haltmeier M, Klingenhoff A, Frisch M, Bayerlein M, Werner T (2005) MatInspector and beyond: promoter analysis based on transcription factor binding sites. Bioinformatics 21: 2933-2942 (Pubitemid 40916416)
-
(2005)
Bioinformatics
, vol.21
, Issue.13
, pp. 2933-2942
-
-
Cartharius, K.1
Frech, K.2
Grote, K.3
Klocke, B.4
Haltmeier, M.5
Klingenhoff, A.6
Frisch, M.7
Bayerlein, M.8
Werner, T.9
-
9
-
-
79958066795
-
Methylation specifies distinct estrogen-induced binding site repertoires of CBP to chromatin
-
Ceschin DG, Walia M, Wenk SS, Duboe C, Gaudon C, Xiao Y, Fauquier L, Sankar M, Vandel L, Gronemeyer H (2011) Methylation specifies distinct estrogen-induced binding site repertoires of CBP to chromatin. Genes Dev 25: 1132-1146
-
(2011)
Genes Dev
, vol.25
, pp. 1132-1146
-
-
Ceschin, D.G.1
Walia, M.2
Wenk, S.S.3
Duboe, C.4
Gaudon, C.5
Xiao, Y.6
Fauquier, L.7
Sankar, M.8
Vandel, L.9
Gronemeyer, H.10
-
10
-
-
0029781068
-
Two distinct actions of retinoid-receptor ligands
-
DOI 10.1038/382819a0
-
Chen JY, Clifford J, Zusi C, Starrett J, Tortolani D, Ostrowski J, Reczek PR, Chambon P, Gronemeyer H (1996) Two distinct actions of retinoid-receptor ligands. Nature 382: 819-822 (Pubitemid 26299567)
-
(1996)
Nature
, vol.382
, Issue.6594
, pp. 819-822
-
-
Chen, J.-Y.1
Clifford, J.2
Zusi, C.3
Starrett, J.4
Tortolani, D.5
Ostrowski, J.6
Reczek, P.R.7
Chambon, P.8
Gronemeyer, H.9
-
11
-
-
21744444920
-
Reciprocal transcriptional regulation of Pou5f1 and Sox2 via the Oct4/Sox2 complex in embryonic stem cells
-
DOI 10.1128/MCB.25.14.6031-6046.2005
-
Chew JL, Loh YH, Zhang W, Chen X, Tam WL, Yeap LS, Li P, Ang YS, Lim B, Robson P, Ng HH (2005) Reciprocal transcrip-tional regulation of Pou5f1 and Sox2 via the Oct4/Sox2 complex in embryonic stem cells. Mol Cell Biol 25: 6031-6046 (Pubitemid 40946556)
-
(2005)
Molecular and Cellular Biology
, vol.25
, Issue.14
, pp. 6031-6046
-
-
Chew, J.-L.1
Loh, Y.-H.2
Zhang, W.3
Chen, X.4
Tam, W.-L.5
Yeap, L.-S.6
Li, P.7
Ang, Y.-S.8
Lim, B.9
Robson, P.10
Ng, H.-H.11
-
12
-
-
0030947316
-
Distinct retinoid X receptor-retinoic acid receptor heterodimers are differentially involved in the control of expression of retinoid target genes in F9 embryonal carcinoma cells
-
Chiba H, Clifford J, Metzger D, Chambon P (1997a) Distinct retinoid X receptor-retinoic acid receptor heterodimers are differentially involved in the control of expression of retinoid target genes in F9 embryonal carcinoma cells. Mol Cell Biol 17: 3013-3020 (Pubitemid 27215015)
-
(1997)
Molecular and Cellular Biology
, vol.17
, Issue.6
, pp. 3013-3020
-
-
Chiba, H.1
Clifford, J.2
Metzger, D.3
Chambon, P.4
-
13
-
-
0030697963
-
Specific and redundant functions of retinoid X receptor/retinoic acid receptor heterodimers in differentiation, proliferation, and apoptosis of F9 embryonal carcinoma cells
-
DOI 10.1083/jcb.139.3.735
-
Chiba H, Clifford J, Metzger D, Chambon P (1997b) Specific and redundant functions of retinoid X Receptor/Retinoic acid receptor heterodimers in differentiation, proliferation, and apoptosis of F9 embryonal carcinoma cells. J Cell Biol 139: 735-747 (Pubitemid 27485838)
-
(1997)
Journal of Cell Biology
, vol.139
, Issue.3
, pp. 735-747
-
-
Chiba, H.1
Clifford, J.2
Metzger, D.3
Chambon, P.4
-
14
-
-
0033617035
-
Differential expression of mouse Disabled 2 gene in retinoic acid-treated F9 embryonal carcinoma cells and early mouse embryos
-
Cho SY, Lee SH, Park SS (1999) Differential expression of mouse Disabled 2 gene in retinoic acid-treated F9 embryonal carcinoma cells and early mouse embryos. Mol Cells 9: 179-184
-
(1999)
Mol Cells
, vol.9
, pp. 179-184
-
-
Cho, S.Y.1
Lee, S.H.2
Park, S.S.3
-
16
-
-
38449101120
-
Integration of biological networks and gene expression data using Cytoscape
-
Cline MS, Smoot M, Cerami E, Kuchinsky A, Landys N, Workman C, Christmas R, Avila-Campilo I, Creech M, Gross B, Hanspers K, Isserlin R, Kelley R, Killcoyne S, Lotia S, Maere S, Morris J, Ono K, Pavlovic V, Pico AR et al (2007) Integration of biological networks and gene expression data using Cytoscape. Nat Protoc 2: 2366-2382
-
(2007)
Nat Protoc
, vol.2
, pp. 2366-2382
-
-
Cline, M.S.1
Smoot, M.2
Cerami, E.3
Kuchinsky, A.4
Landys, N.5
Workman, C.6
Christmas, R.7
Avila-Campilo, I.8
Creech, M.9
Gross, B.10
Hanspers, K.11
Isserlin, R.12
Kelley, R.13
Killcoyne, S.14
Lotia, S.15
Maere, S.16
Morris, J.17
Ono, K.18
Pavlovic, V.19
Pico, A.R.20
more..
-
17
-
-
34848862778
-
Design of selective nuclear receptor modulators: RAR and RXR as a case study
-
DOI 10.1038/nrd2398, PII NRD2398
-
de Lera AR, Bourguet W, Altucci L, Gronemeyer H (2007) Design of selective nuclear receptor modulators: RAR and RXR as a case study. Nat Rev Drug Discov 6: 811-820 (Pubitemid 47504872)
-
(2007)
Nature Reviews Drug Discovery
, vol.6
, Issue.10
, pp. 811-820
-
-
De Lera, A.R.1
Bourguet, W.2
Altucci, L.3
Gronemeyer, H.4
-
18
-
-
77958510339
-
Acute promyelocytic leukaemia: Novel insights into the mechanisms of cure
-
de The H, Chen Z (2010) Acute promyelocytic leukaemia: novel insights into the mechanisms of cure. Nat Rev Cancer 10: 775-783
-
(2010)
Nat Rev Cancer
, vol.10
, pp. 775-783
-
-
De The, H.1
Chen, Z.2
-
19
-
-
0026068274
-
The transcription factor, Egr-1, is rapidly modulated in response to retinoic acid in P19 embryonal carcinoma cells
-
Edwards SA, Darland T,Sosnowski R, Samuels M, AdamsonED(1991) The transcription factor, Egr-1, is rapidly modulated in response to retinoic acid in P19 embryonal carcinoma cells. Dev Biol 148: 165-173 (Pubitemid 121004757)
-
(1991)
Developmental Biology
, vol.148
, Issue.1
, pp. 165-173
-
-
Edwards, S.A.1
Darland, T.2
Sosnowski, R.3
Samuels, M.4
Adamson, E.D.5
-
20
-
-
33846521053
-
Reconstructing dynamic regulatory maps
-
Ernst J, Vainas O, Harbison CT, Simon I, Bar-Joseph Z (2007) Reconstructing dynamic regulatory maps. Mol Syst Biol 3: 74
-
(2007)
Mol Syst Biol
, vol.3
, pp. 74
-
-
Ernst, J.1
Vainas, O.2
Harbison, C.T.3
Simon, I.4
Bar-Joseph, Z.5
-
21
-
-
77950347868
-
The executable pathway to biological networks
-
Fisher J, Piterman N (2010) The executable pathway to biological networks. Brief Funct Genomics 9: 79-92
-
(2010)
Brief Funct Genomics
, vol.9
, pp. 79-92
-
-
Fisher, J.1
Piterman, N.2
-
22
-
-
8644267516
-
Sox7 plays crucial roles in parietal endoderm differentiation in F9 embryonal carcinoma cells through regulating Gata-4 and Gata-6 expression
-
DOI 10.1128/MCB.24.23.10492-10503.2004
-
Futaki S, Hayashi Y, Emoto T, Weber CN, Sekiguchi K (2004) Sox7 plays crucial roles in parietal endoderm differentiation in F9 embryonal carcinoma cells through regulating Gata-4 and Gata-6 expression. Mol Cell Biol 24: 10492-10503 (Pubitemid 39507885)
-
(2004)
Molecular and Cellular Biology
, vol.24
, Issue.23
, pp. 10492-10503
-
-
Futaki, S.1
Hayashi, Y.2
Emoto, T.3
Weber, C.N.4
Sekiguchi, K.5
-
23
-
-
33846690407
-
Histone methylation-dependent mechanisms impose ligand dependency for gene activation by nuclear receptors
-
DOI 10.1016/j.cell.2006.12.038, PII S0092867407000621
-
Garcia-Bassets I, Kwon YS, Telese F, Prefontaine GG, Hutt KR, Cheng CS, Ju BG, Ohgi KA, Wang J, Escoubet-Lozach L, Rose DW, Glass CK, Fu XD, Rosenfeld MG (2007) Histone methylation-dependent mechanisms impose ligand dependency for gene activation by nuclear receptors. Cell 128: 505-518 (Pubitemid 46198894)
-
(2007)
Cell
, vol.128
, Issue.3
, pp. 505-518
-
-
Garcia-Bassets, I.1
Kwon, Y.-S.2
Telese, F.3
Prefontaine, G.G.4
Hutt, K.R.5
Cheng, C.S.6
Ju, B.-G.7
Ohgi, K.A.8
Wang, J.9
Escoubet-Lozach, L.10
Rose, DavidW.11
Glass, C.K.12
Fu, X.-D.13
Rosenfeld, M.G.14
-
24
-
-
0033179675
-
Structural basis for engineering of retinoic acid receptor isotype-selective agonists and antagonists
-
DOI 10.1016/S1074-5521(99)80084-2
-
Gehin M, Vivat V, Wurtz JM, Losson R, Chambon P, Moras D, Gronemeyer H (1999) Structural basis for engineering of retinoic acid receptor isotype-selective agonists and antagonists. Chem Biol 6: 519-529 (Pubitemid 29380766)
-
(1999)
Chemistry and Biology
, vol.6
, Issue.8
, pp. 519-529
-
-
Gehin, M.1
Vivat, V.2
Wurtz, J.-M.3
Losson, R.4
Chambon, P.5
Moras, D.6
Gronemeyer, H.7
-
25
-
-
8844273694
-
Rational design of RAR-selective ligands revealed by RARβ crystal stucture
-
DOI 10.1038/sj.embor.7400235, PII 7400235
-
Germain P, Kammerer S, Perez E, Peluso-Iltis C, Tortolani D, Zusi FC, Starrett J, Lapointe P, Daris JP, Marinier A, de Lera AR, Rochel N, Gronemeyer H (2004) Rational design of RAR-selective ligands revealed by RARbeta crystal structure. EMBO Rep 5: 877-882 (Pubitemid 350011232)
-
(2004)
EMBO Reports
, vol.5
, Issue.9
, pp. 877-882
-
-
Germain, P.1
Kammerer, S.2
Perez, E.3
Peluso-Iltis, C.4
Tortolani, D.5
Zusi, F.C.6
Starrett, J.7
Lapointe, P.8
Daris, J.-P.9
Marinier, A.10
De Lera, A.R.11
Rochel, N.12
Gronemeyer, H.13
-
26
-
-
8844262660
-
Principles for modulation of the nuclear receptor superfamily
-
DOI 10.1038/nrd1551
-
Gronemeyer H, Gustafsson JA, Laudet V (2004) Principles for modulation of the nuclear receptor superfamily. Nat Rev Drug Discov 3: 950-964 (Pubitemid 39534319)
-
(2004)
Nature Reviews Drug Discovery
, vol.3
, Issue.11
, pp. 950-964
-
-
Gronemeyer, H.1
Gustafsson, J.-A.2
Laudet, V.3
-
27
-
-
63449091551
-
Fingering modulators of retinoic acid signaling identifies new prognostic marker for neuroblastoma
-
Gronemeyer H, Zelent A (2009) Fingering modulators of retinoic acid signaling identifies new prognostic marker for neuroblastoma. Cancer Cell 15: 249-251
-
(2009)
Cancer Cell
, vol.15
, pp. 249-251
-
-
Gronemeyer, H.1
Zelent, A.2
-
28
-
-
0036691478
-
Global gene expression patterns during differentiation of F9 embryonal carcinoma cells into parietal endoderm
-
DOI 10.1007/s10142-002-0062-6
-
Harris TM, Childs G (2002) Global gene expression patterns during differentiation of F9 embryonal carcinoma cells into parietal endoderm. Funct Integr Genomics 2: 105-119 (Pubitemid 41399309)
-
(2002)
Functional and Integrative Genomics
, vol.2
, Issue.3
, pp. 105-119
-
-
Harris, T.M.1
Childs, G.2
-
30
-
-
0021136798
-
Butyrate inhibits the retinoic acid-induced differentiation of F9 teratocarcinoma stem cells
-
Levine RA, Campisi J, Wang SY, Gudas LJ (1984) Butyrate inhibits the retinoic acid-induced differentiation of F9 teratocarcinoma stem cells. Dev Biol 105: 443-450 (Pubitemid 14021995)
-
(1984)
Developmental Biology
, vol.105
, Issue.2
, pp. 443-450
-
-
Levine, R.A.1
Campisi, J.2
Wang, S.-Y.3
Gudas, L.J.4
-
31
-
-
1242316964
-
2 knockout cells
-
DOI 10.1016/j.yexcr.2003.11.014
-
Li R, Faria TN, Boehm M, Nabel EG, Gudas LJ (2004) Retinoic acid causes cell growth arrest and an increase in p27 in F9 wild type but not in F9 retinoic acid receptor beta2 knockout cells. Exp Cell Res 294: 290-300 (Pubitemid 38229799)
-
(2004)
Experimental Cell Research
, vol.294
, Issue.1
, pp. 290-300
-
-
Li, R.1
Faria, T.N.2
Boehm, M.3
Nabel, E.G.4
Gudas, L.J.5
-
32
-
-
34247526984
-
Triterpenoids and rexinoids as multifunctional agents for the prevention and treatment of cancer
-
DOI 10.1038/nrc2129, PII NRC2129
-
Liby KT, Yore MM, Sporn MB (2007) Triterpenoids and rexinoids as multifunctional agents for the prevention and treatment of cancer. Nat Rev Cancer 7: 357-369 (Pubitemid 46652485)
-
(2007)
Nature Reviews Cancer
, vol.7
, Issue.5
, pp. 357-369
-
-
Liby, K.T.1
Yore, M.M.2
Sporn, M.B.3
-
33
-
-
48449102450
-
Hubba: Hub objects analyzer - A framework of interactome hubs identification for network biology
-
Lin CY, Chin CH, Wu HH, Chen SH, Ho CW, Ko MT (2008) Hubba: hub objects analyzer-a framework of interactome hubs identification for network biology. Nucleic Acids Res 36: W438-W443
-
(2008)
Nucleic Acids Res
, vol.36
-
-
Lin, C.Y.1
Chin, C.H.2
Wu, H.H.3
Chen, S.H.4
Ho, C.W.5
Ko, M.T.6
-
34
-
-
0033743405
-
Cytochrome P450RAI(CYP26) promoter: A distinct composite retinoic acid response element underlies the complex regulation of retinoic acid metabolism
-
Loudig O, Babichuk C, White J, Abu-Abed S, Mueller C, Petkovich M (2000) Cytochrome P450RAI(CYP26) promoter: a distinct composite retinoic acid response element underlies the complex regulation of retinoic acid metabolism. Mol Endocrinol 14: 1483-1497
-
(2000)
Mol Endocrinol
, vol.14
, pp. 1483-1497
-
-
Loudig, O.1
Babichuk, C.2
White, J.3
Abu-Abed, S.4
Mueller, C.5
Petkovich, M.6
-
35
-
-
28044448712
-
Transcriptional co-operativity between distant retinoic acid response elements in regulation of Cyp26A1 inducibility
-
DOI 10.1042/BJ20050874
-
Loudig O, Maclean GA, Dore NL, Luu L, Petkovich M (2005) Transcriptional co-operativity between distant retinoic acid response elements in regulation of Cyp26A1 inducibility. Biochem J 392: 241-248 (Pubitemid 41689420)
-
(2005)
Biochemical Journal
, vol.392
, Issue.1
, pp. 241-248
-
-
Loudig, O.1
MacLean, G.A.2
Dore, N.L.3
Luu, L.4
Petkovich, M.5
-
36
-
-
78651309953
-
Ligand-dependent dynamics of retinoic acid receptor binding during early neurogenesis
-
Mahony S, Mazzoni EO, McCuine S, Young RA, Wichterle H, Gifford DK (2011) Ligand-dependent dynamics of retinoic acid receptor binding during early neurogenesis. Genome Biol 12: R2
-
(2011)
Genome Biol
, vol.12
-
-
Mahony, S.1
Mazzoni, E.O.2
McCuine, S.3
Young, R.A.4
Wichterle, H.5
Gifford, D.K.6
-
37
-
-
33144488245
-
Function of retinoid nuclear receptors: Lessons from genetic and pharmacological dissections of the retinoic acid signaling pathway during mouse embryogenesis
-
DOI 10.1146/annurev.pharmtox.46.120604.141156
-
Mark M, Ghyselinck NB, Chambon P (2006) Function of retinoid nuclear receptors: lessons from genetic and pharmacological dissections of the retinoic acid signaling pathway during mouse embryogenesis. Annu Rev Pharmacol Toxicol 46: 451-480 (Pubitemid 43271197)
-
(2006)
Annual Review of Pharmacology and Toxicology
, vol.46
, pp. 451-480
-
-
Mark, M.1
Ghyselinck, N.B.2
Chambon, P.3
-
38
-
-
76549103455
-
Discovery of novel transcriptional and epigenetic targets in APL by global ChIP analyses: Emerging opportunity and challenge
-
Mikesch JH, Gronemeyer H, So CW (2010) Discovery of novel transcriptional and epigenetic targets in APL by global ChIP analyses: emerging opportunity and challenge. Cancer Cell 17: 112-114
-
(2010)
Cancer Cell
, vol.17
, pp. 112-114
-
-
Mikesch, J.H.1
Gronemeyer, H.2
So, C.W.3
-
39
-
-
41449118699
-
The transcription factor EGR1 controls both the proliferation and localization of hematopoietic stem cells
-
DOI 10.1016/j.stem.2008.01.015, PII S1934590908000568
-
Min IM, Pietramaggiori G, Kim FS, Passegue E, Stevenson KE, Wagers AJ (2008) The transcription factor EGR1 controls both the proliferation and localization of hematopoietic stem cells. Cell Stem Cell 2: 380-391 (Pubitemid 351455239)
-
(2008)
Cell Stem Cell
, vol.2
, Issue.4
, pp. 380-391
-
-
Min, I.M.1
Pietramaggiori, G.2
Kim, F.S.3
Passegue, E.4
Stevenson, K.E.5
Wagers, A.J.6
-
40
-
-
70350537033
-
Nuclear receptor coregulators in cancer biology
-
O'Malley BW, Kumar R (2009) Nuclear receptor coregulators in cancer biology. Cancer Res 69: 8217-8222
-
(2009)
Cancer Res
, vol.69
, pp. 8217-8222
-
-
O'Malley, B.W.1
Kumar, R.2
-
41
-
-
68549104469
-
The transcriptional network controlling pluripotency in ES cells
-
Orkin SH, Wang J, Kim J, Chu J, Rao S, Theunissen TW, Shen X, Levasseur DN (2008) The transcriptional network controlling pluripotency in ES cells. Cold Spring Harb Symp Quant Biol 73: 195-202
-
(2008)
Cold Spring Harb Symp Quant Biol
, vol.73
, pp. 195-202
-
-
Orkin, S.H.1
Wang, J.2
Kim, J.3
Chu, J.4
Rao, S.5
Theunissen, T.W.6
Shen, X.7
Levasseur, D.N.8
-
42
-
-
21744435965
-
Controlling nuclear receptors: The circular logic of cofactor cycles
-
DOI 10.1038/nrm1680
-
Perissi V, Rosenfeld MG (2005) Controlling nuclear receptors: the circular logic of cofactor cycles. Nat Rev Mol Cell Biol 6: 542-554 (Pubitemid 40943045)
-
(2005)
Nature Reviews Molecular Cell Biology
, vol.6
, Issue.7
, pp. 542-554
-
-
Perissi, V.1
Rosenfeld, M.G.2
-
43
-
-
38849086840
-
Model-based deconvolution of genome-wide DNA binding
-
DOI 10.1093/bioinformatics/btm592
-
Reiss DJ, Facciotti MT, Baliga NS (2008) Model-based deconvolution of genome-wide DNA binding. Bioinformatics 24: 396-403 (Pubitemid 351189016)
-
(2008)
Bioinformatics
, vol.24
, Issue.3
, pp. 396-403
-
-
Reiss, D.J.1
Facciotti, M.T.2
Baliga, N.S.3
-
44
-
-
33744792310
-
Sensors and signals: A coactivator/corepressor/epigenetic code for integrating signal-dependent programs of transcriptional response
-
DOI 10.1101/gad.1424806
-
Rosenfeld MG, Lunyak VV, Glass CK (2006) Sensors and signals: a coactivator/corepressor/epigenetic code for integrating signal-dependent programs of transcriptional response. Genes Dev 20: 1405-1428 (Pubitemid 43830648)
-
(2006)
Genes and Development
, vol.20
, Issue.11
, pp. 1405-1428
-
-
Rosenfeld, M.G.1
Lunyak, V.V.2
Glass, C.K.3
-
45
-
-
33747894577
-
TM4 microarray software suite
-
Saeed AI, Bhagabati NK, Braisted JC, Liang W, Sharov V, Howe EA, Li J, Thiagarajan M, White JA, Quackenbush J (2006) TM4 microarray software suite. Methods Enzymol 411: 134-193
-
(2006)
Methods Enzymol
, vol.411
, pp. 134-193
-
-
Saeed, A.I.1
Bhagabati, N.K.2
Braisted, J.C.3
Liang, W.4
Sharov, V.5
Howe, E.A.6
Li, J.7
Thiagarajan, M.8
White, J.A.9
Quackenbush, J.10
-
46
-
-
0037311919
-
TM4: A free, open-source system for microarray data management and analysis
-
Saeed AI, Sharov V, White J, Li J, Liang W, Bhagabati N, Braisted J, Klapa M, Currier T, Thiagarajan M, Sturn A, Snuffin M, Rezantsev A, Popov D, Ryltsov A, Kostukovich E, Borisovsky I, Liu Z, Vinsavich A, Trush V et al (2003) TM4: a free, open-source system for microarray data management and analysis. Biotechniques 34: 374-378 (Pubitemid 36184095)
-
(2003)
BioTechniques
, vol.34
, Issue.2
, pp. 374-378
-
-
Saeed, A.I.1
Sharov, V.2
White, J.3
Li, J.4
Liang, W.5
Bhagabati, N.6
Braisted, J.7
Klapa, M.8
Currier, T.9
Thiagarajan, M.10
Sturn, A.11
Snuffin, M.12
Rezantsev, A.13
Popov, D.14
Ryltsov, A.15
Kostukovich, E.16
Borisovsky, I.17
Liu, Z.18
Vinsavich, A.19
Trush, V.20
Quackenbush, J.21
more..
-
47
-
-
69249227485
-
Growth factor-antagonized rexinoid apoptosis involves permissive PPARgamma/RXR heterodimers to activate the intrinsic death pathway by NO
-
Shankaranarayanan P, Rossin A, Khanwalkar H, Alvarez S, Alvarez R, Jacobson A, Nebbioso A, de Lera AR, Altucci L, Gronemeyer H (2009) Growth factor-antagonized rexinoid apoptosis involves permissive PPARgamma/RXR heterodimers to activate the intrinsic death pathway by NO. Cancer Cell 16: 220-231
-
(2009)
Cancer Cell
, vol.16
, pp. 220-231
-
-
Shankaranarayanan, P.1
Rossin, A.2
Khanwalkar, H.3
Alvarez, S.4
Alvarez, R.5
Jacobson, A.6
Nebbioso, A.7
De Lera, A.R.8
Altucci, L.9
Gronemeyer, H.10
-
48
-
-
0242490780
-
Cytoscape: A software Environment for integrated models of biomolecular interaction networks
-
DOI 10.1101/gr.1239303
-
Shannon P, Markiel A, Ozier O, Baliga NS, Wang JT, Ramage D, Amin N, Schwikowski B, Ideker T (2003) Cytoscape: a software environment for integrated models of biomolecular interaction networks. Genome Res 13: 2498-2504 (Pubitemid 37428274)
-
(2003)
Genome Research
, vol.13
, Issue.11
, pp. 2498-2504
-
-
Shannon, P.1
Markiel, A.2
Ozier, O.3
Baliga, N.S.4
Wang, J.T.5
Ramage, D.6
Amin, N.7
Schwikowski, B.8
Ideker, T.9
-
49
-
-
38949111026
-
Gene expression profiling elucidates a specific role for RARgamma in the retinoic acid-induced differentiation of F9 teratocarcinoma stem cells
-
Su D, Gudas LJ (2008) Gene expression profiling elucidates a specific role for RARgamma in the retinoic acid-induced differentiation of F9 teratocarcinoma stem cells. Biochem Pharmacol 75: 1129-1160
-
(2008)
Biochem Pharmacol
, vol.75
, pp. 1129-1160
-
-
Su, D.1
Gudas, L.J.2
-
50
-
-
0029894589
-
Cell-type and promoter-context dependent retinoic acid receptor (RAR) redundancies for RARβ2 and Hoxa-1 activation in F9 and P19 cells can be artefactually generated by gene knockouts
-
DOI 10.1073/pnas.93.12.6197
-
Taneja R, Roy B, Plassat JL, Zusi CF, Ostrowski J, Reczek PR, Chambon P (1996) Cell-type and promoter-context dependent retinoic acid receptor (RAR) redundancies for RAR beta 2 and Hoxa-1 activation in F9 and P19 cells can be artefactually generated by gene knockouts. Proc Natl Acad Sci USA 93: 6197-6202 (Pubitemid 26190827)
-
(1996)
Proceedings of the National Academy of Sciences of the United States of America
, vol.93
, Issue.12
, pp. 6197-6202
-
-
Taneja, R.1
Roy, B.2
Plassat, J.-L.3
Zusi, C.F.4
Ostrowski, J.5
Reczek, P.R.6
Chambon, P.7
-
51
-
-
0032522992
-
Notch4 and Wnt-1 proteins function to regulate branching morphogenesis of mammary epithelial cells in an opposing fashion
-
DOI 10.1006/dbio.1998.8863
-
Uyttendaele H, Soriano JV, Montesano R, Kitajewski J (1998) Notch4 and Wnt-1 proteins function to regulate branching morphogenesis of mammary epithelial cells in an opposing fashion. Dev Biol 196: 204-217 (Pubitemid 28198847)
-
(1998)
Developmental Biology
, vol.196
, Issue.2
, pp. 204-217
-
-
Uyttendaele, H.1
Soriano, J.V.2
Montesano, R.3
Kitajewski, J.4
-
52
-
-
4944262287
-
Constitutively active Notch4 promotes early human hematopoietic progenitor cell maintenance while inhibiting differentiation and causes lymphoid abnormalities in vivo
-
DOI 10.1182/blood-2004-01-0204
-
Vercauteren SM, Sutherland HJ (2004) Constitutively active Notch4 promotes early human hematopoietic progenitor cell maintenance while inhibiting differentiation and causes lymphoid abnormalities in vivo. Blood 104: 2315-2322 (Pubitemid 39331828)
-
(2004)
Blood
, vol.104
, Issue.8
, pp. 2315-2322
-
-
Vercauteren, S.M.1
Sutherland, H.J.2
-
53
-
-
33749237426
-
3 in human leukemia HL60 cells through a vitamin D response element in the 5′-flanking region
-
DOI 10.1038/sj.onc.1209697, PII 1209697
-
WangX, Wang TT, White JH, StudzinskiGP (2006) Induction ofkinase suppressor of RAS-1(KSR-1) gene by 1, alpha25-dihydroxyvitamin D3 in human leukemia HL60 cells through a vitamin D response element in the 50-flanking region. Oncogene 25: 7078-7085 (Pubitemid 44722075)
-
(2006)
Oncogene
, vol.25
, Issue.53
, pp. 7078-7085
-
-
Wang, X.1
Wang, T.-T.2
White, J.H.3
Studzinski, G.P.4
-
54
-
-
10644261731
-
Expression of constitutively active Notch4 (Int-3) modulates myeloid proliferation and differentiation and promotes expansion of hematopoietic progenitors
-
DOI 10.1038/sj.leu.2403291
-
Ye Q, Shieh JH, Morrone G, Moore MA (2004) Expression of consti-tutively active Notch4 (Int-3) modulates myeloid proliferation and differentiation and promotes expansion of hematopoietic progenitors. Leukemia 18: 777-787 (Pubitemid 38500197)
-
(2004)
Leukemia
, vol.18
, Issue.4
, pp. 777-787
-
-
Ye, Q.1
Shieh, J.-H.2
Morrone, G.3
Moore, M.A.S.4
-
55
-
-
77951134107
-
Chemoprevention of colorectal cancer by targeting APC-deficient cells for apoptosis
-
Zhang L, Ren X, Alt E, Bai X, Huang S, Xu Z, Lynch PM, Moyer MP, Wen XF, Wu X (2010) Chemoprevention of colorectal cancer by targeting APC-deficient cells for apoptosis. Nature 464: 1058-1061
-
(2010)
Nature
, vol.464
, pp. 1058-1061
-
-
Zhang, L.1
Ren, X.2
Alt, E.3
Bai, X.4
Huang, S.5
Xu, Z.6
Lynch, P.M.7
Moyer, M.P.8
Wen, X.F.9
Wu, X.10
-
56
-
-
53849146020
-
Model-based analysis of ChIP-Seq (MACS)
-
Zhang Y, Liu T, Meyer CA, Eeckhoute J, Johnson DS, Bernstein BE, Nusbaum C, Myers RM, Brown M, Li W, Liu XS (2008) Model-based analysis of ChIP-Seq (MACS). Genome Biol 9: R137
-
(2008)
Genome Biol
, vol.9
-
-
Zhang, Y.1
Liu, T.2
Meyer, C.A.3
Eeckhoute, J.4
Johnson, D.S.5
Bernstein, B.E.6
Nusbaum, C.7
Myers, R.M.8
Brown, M.9
Li, W.10
Liu, X.S.11
|