-
1
-
-
0032489015
-
The cell as a collection of protein machines: Preparing the next generation of molecular biologists
-
DOI 10.1016/S0092-8674(00)80922-8
-
Alberts B (1998) The cell as a collection of protein machines: preparing the next generation of molecular biologists. Cell 92(3):291-294 (Pubitemid 28093007)
-
(1998)
Cell
, vol.92
, Issue.3
, pp. 291-294
-
-
Alberts, B.1
-
2
-
-
79959211995
-
Analyzing protein-protein interactions by quantitative mass spectrometry
-
1:CAS:528:DC%2BC3MXhtVagtL%2FI 21382495
-
Paul FE, Hosp F, Selbach M (2011) Analyzing protein-protein interactions by quantitative mass spectrometry. Methods 54(4):387-395
-
(2011)
Methods
, vol.54
, Issue.4
, pp. 387-395
-
-
Paul, F.E.1
Hosp, F.2
Selbach, M.3
-
3
-
-
0242317678
-
On the number of protein-protein interactions in the yeast proteome
-
DOI 10.1093/nar/gkg466
-
Grigoriev A (2003) On the number of protein-protein interactions in the yeast proteome. Nucleic Acids Res 31(14):4157-4161 (Pubitemid 37442295)
-
(2003)
Nucleic Acids Research
, vol.31
, Issue.14
, pp. 4157-4161
-
-
Grigoriev, A.1
-
4
-
-
33846047770
-
IntAct-open source resource for molecular interaction data
-
1:CAS:528:DC%2BD2sXivFKmsg%3D%3D 1751531 17145710 Database issue
-
Kerrien S et al (2007) IntAct-open source resource for molecular interaction data. Nucleic Acids Res 35:D561-D565 Database issue
-
(2007)
Nucleic Acids Res
, vol.35
-
-
Kerrien, S.1
-
5
-
-
84855867436
-
Analysis of stable and transient protein-protein interactions
-
1:CAS:528:DC%2BC38Xht1KmtL7E 3314026 22183593
-
Byrum S et al (2012) Analysis of stable and transient protein-protein interactions. Methods Mol Biol 833:143-152
-
(2012)
Methods Mol Biol
, vol.833
, pp. 143-152
-
-
Byrum, S.1
-
6
-
-
4043177112
-
Haptoglobin phenotypes in health and disorders
-
15298155
-
Sadrzadeh SM, Bozorgmehr J (2004) Haptoglobin phenotypes in health and disorders. Am J Clin Pathol 121(Suppl):S97-S104
-
(2004)
Am J Clin Pathol
, vol.121
, Issue.SUPPL.
-
-
Sadrzadeh, S.M.1
Bozorgmehr, J.2
-
7
-
-
77952903892
-
Rewiring cells: Synthetic biology as a tool to interrogate the organizational principles of living systems
-
1:CAS:528:DC%2BC3cXotFKjsbg%3D 2965450 20192780
-
Bashor CJ et al (2010) Rewiring cells: synthetic biology as a tool to interrogate the organizational principles of living systems. Annu Rev Biophys 39:515-537
-
(2010)
Annu Rev Biophys
, vol.39
, pp. 515-537
-
-
Bashor, C.J.1
-
8
-
-
0027424297
-
Identification of katanin, an ATPase that severs and disassembles stable microtubules
-
DOI 10.1016/0092-8674(93)90377-3
-
McNally FJ, Vale RD (1993) Identification of katanin, an ATPase that severs and disassembles stable microtubules. Cell 75(3):419-429 (Pubitemid 23335068)
-
(1993)
Cell
, vol.75
, Issue.3
, pp. 419-429
-
-
McNally, F.J.1
Vale, R.D.2
-
9
-
-
0035141277
-
The tubulin fraternity: Alpha to eta
-
DOI 10.1016/S0955-0674(00)00173-3
-
Dutcher SK (2001) The tubulin fraternity: alpha to eta. Curr Opin Cell Biol 13(1):49-54 (Pubitemid 32119292)
-
(2001)
Current Opinion in Cell Biology
, vol.13
, Issue.1
, pp. 49-54
-
-
Dutcher, S.K.1
-
10
-
-
79952280117
-
Dynamic as well as stable protein interactions contribute to genome function and maintenance
-
1:CAS:528:DC%2BC3MXitVOhtLk%3D 3040344 21046224
-
Hemmerich P, Schmiedeberg L, Diekmann S (2011) Dynamic as well as stable protein interactions contribute to genome function and maintenance. Chromosome Res 19(1):131-151
-
(2011)
Chromosome Res
, vol.19
, Issue.1
, pp. 131-151
-
-
Hemmerich, P.1
Schmiedeberg, L.2
Diekmann, S.3
-
11
-
-
0036469060
-
Unraveling hot spots in binding interfaces: Progress and challenges
-
1:CAS:528:DC%2BD38XhtF2it70%3D 11839484
-
DeLano WL (2002) Unraveling hot spots in binding interfaces: progress and challenges. Curr Opin Struct Biol 12(1):14-20
-
(2002)
Curr Opin Struct Biol
, vol.12
, Issue.1
, pp. 14-20
-
-
Delano, W.L.1
-
12
-
-
0028303384
-
A thermodynamic scale for leucine zipper stability and dimerization specificity: e and g interhelical interactions
-
Krylov D, Mikhailenko I, Vinson C (1994) A thermodynamic scale for leucine zipper stability and dimerization specificity: e and g interhelical interactions. EMBO J 13(12):2849-2861 (Pubitemid 24191695)
-
(1994)
EMBO Journal
, vol.13
, Issue.12
, pp. 2849-2861
-
-
Krylov, D.1
Mikhailenko, I.2
Vinson, C.3
-
13
-
-
65249099497
-
Fundamental aspects of protein-protein association kinetics
-
1:CAS:528:DC%2BD1MXhsFWns7w%3D 19196002
-
Schreiber G, Haran G, Zhou HX (2009) Fundamental aspects of protein-protein association kinetics. Chem Rev 109(3):839-860
-
(2009)
Chem Rev
, vol.109
, Issue.3
, pp. 839-860
-
-
Schreiber, G.1
Haran, G.2
Zhou, H.X.3
-
14
-
-
0028859279
-
Protein modules and signalling networks
-
1:CAS:528:DyaK2MXjsl2msLg%3D 7531822
-
Pawson T (1995) Protein modules and signalling networks. Nature 373(6515):573-580
-
(1995)
Nature
, vol.373
, Issue.6515
, pp. 573-580
-
-
Pawson, T.1
-
16
-
-
74849104439
-
Dynamic proteomics in modeling of the living cell. Protein-protein interactions
-
1:CAS:528:DC%2BC3cXis1eisg%3D%3D
-
Terentiev AA, Moldogazieva NT, Shaitan KV (2009) Dynamic proteomics in modeling of the living cell. Protein-protein interactions. Biochemistry (Mosc) 74(13):1586-1607
-
(2009)
Biochemistry (Mosc)
, vol.74
, Issue.13
, pp. 1586-1607
-
-
Terentiev, A.A.1
Moldogazieva, N.T.2
Shaitan, K.V.3
-
17
-
-
79551517793
-
Recent advances in charting protein-protein interaction: Mass spectrometry-based approaches
-
1:CAS:528:DC%2BC3MXhs1egt78%3D 20934865
-
Gavin AC, Maeda K, Kuhner S (2011) Recent advances in charting protein-protein interaction: mass spectrometry-based approaches. Curr Opin Biotechnol 22(1):42-49
-
(2011)
Curr Opin Biotechnol
, vol.22
, Issue.1
, pp. 42-49
-
-
Gavin, A.C.1
Maeda, K.2
Kuhner, S.3
-
18
-
-
0001818091
-
Yeast two-hybrid systems and protein interaction mapping projects for yeast and worm
-
DOI 10.1002/1097-0061(20000630)17:2<88::AID-YEA20>3.0.CO;2-Y
-
Walhout AJ, Boulton SJ, Vidal M (2000) Yeast two-hybrid systems and protein interaction mapping projects for yeast and worm. Yeast 17(2):88-94 (Pubitemid 30466087)
-
(2000)
Comparative and Functional Genomics
, vol.17
, Issue.2
, pp. 88-94
-
-
Walhout, A.J.M.1
Boulton, S.J.2
Vidal, M.3
-
19
-
-
0034614678
-
Protein interaction mapping in C. Elegans using proteins involved in vulval development
-
1:CAS:528:DC%2BD3cXis1Cjtg%3D%3D 10615043
-
Walhout AJ et al (2000) Protein interaction mapping in C. elegans using proteins involved in vulval development. Science 287(5450):116-122
-
(2000)
Science
, vol.287
, Issue.5450
, pp. 116-122
-
-
Walhout, A.J.1
-
20
-
-
0345600247
-
A Protein Interaction Map of Drosophila melanogaster
-
DOI 10.1126/science.1090289
-
Giot L et al (2003) A protein interaction map of Drosophila melanogaster. Science 302(5651):1727-1736 (Pubitemid 37505730)
-
(2003)
Science
, vol.302
, Issue.5651
, pp. 1727-1736
-
-
Giot, L.1
Bader, J.S.2
Brouwer, C.3
Chaudhuri, A.4
Kuang, B.5
Li, Y.6
Hao, Y.L.7
Ooi, C.E.8
Godwin, B.9
Vitols, E.10
Vijayadamodar, G.11
Pochart, P.12
Machineni, H.13
Welsh, M.14
Kong, Y.15
Zerhusen, B.16
Malcolm, R.17
Varrone, Z.18
Collis, A.19
Minto, M.20
Burgess, S.21
McDaniel, L.22
Stimpson, E.23
Spriggs, F.24
Williams, J.25
Neurath, K.26
Ioime, N.27
Agee, M.28
Voss, E.29
Furtak, K.30
Renzulli, R.31
Aanensen, N.32
Carrolla, S.33
Bickelhaupt, E.34
Lazovatsky, Y.35
DaSilva, A.36
Zhong, J.37
Stanyon, C.A.38
Finley Jr., R.L.39
White, K.P.40
Braverman, M.41
Jarvie, T.42
Gold, S.43
Leach, M.44
Knight, J.45
Shimkets, R.A.46
McKenna, M.P.47
Chant, J.48
Rothberg, J.M.49
more..
-
21
-
-
0034628508
-
A comprehensive analysis of protein-protein interactions in Saccharomyces cerevisiae
-
DOI 10.1038/35001009
-
Uetz P et al (2000) A comprehensive analysis of protein-protein interactions in Saccharomyces cerevisiae. Nature 403(6770):623-627 (Pubitemid 30103994)
-
(2000)
Nature
, vol.403
, Issue.6770
, pp. 623-627
-
-
Uetz, P.1
Glot, L.2
Cagney, G.3
Mansfield, T.A.4
Judson, R.S.5
Knight, J.R.6
Lockshon, D.7
Narayan, V.8
Srinivasan, M.9
Pochart, P.10
Qureshi-Emlli, A.11
Li, Y.12
Godwin, B.13
Conover, D.14
Kalbfleisch, T.15
Vijayadamodar, G.16
Yang, M.17
Johnston, M.18
Fields, S.19
Rothberg, J.M.20
more..
-
22
-
-
9144264169
-
A Map of the Interactome Network of the Metazoan C. Elegans
-
DOI 10.1126/science.1091403
-
Li S et al (2004) A map of the interactome network of the metazoan C. elegans. Science 303(5657):540-543 (Pubitemid 38120855)
-
(2004)
Science
, vol.303
, Issue.5657
, pp. 540-543
-
-
Li, S.1
Armstrong, C.M.2
Bertin, N.3
Ge, H.4
Milstein, S.5
Boxem, M.6
Vidalain, P.-O.7
Han, J.-D.J.8
Chesneau, A.9
Hao, T.10
Goldberg, D.S.11
Li, N.12
Martinez, M.13
Rual, J.-F.14
Lamesch, P.15
Xu, L.16
Tewari, M.17
Wong, S.L.18
Zhang, L.V.19
Berriz, G.F.20
Jacotot, L.21
Vaglio, P.22
Reboul, J.23
Hirozane-Kishikawa, T.24
Li, Q.25
Gabel, H.W.26
Elewa, A.27
Baumgartner, B.28
Rose, D.J.29
Yu, H.30
Bosak, S.31
Sequerra, R.32
Fraser, A.33
Mango, S.E.34
Saxton, W.M.35
Strome, S.36
Van Den Heuvel, S.V.37
Piano, F.38
Vandenhaute, J.39
Sardet, C.40
Gerstein, M.41
Doucette-Stamm, L.42
Gunsalus, K.C.43
Harper, J.W.44
Cusick, M.E.45
Roth, F.P.46
Hill, D.E.47
Vidal, M.48
more..
-
23
-
-
27144530248
-
Towards a proteome-scale map of the human protein-protein interaction network
-
1:CAS:528:DC%2BD2MXhtFahtLzP 16189514
-
Rual JF et al (2005) Towards a proteome-scale map of the human protein-protein interaction network. Nature 437(7062):1173-1178
-
(2005)
Nature
, vol.437
, Issue.7062
, pp. 1173-1178
-
-
Rual, J.F.1
-
24
-
-
0037050026
-
Functional organization of the yeast proteome by systematic analysis of protein complexes
-
1:CAS:528:DC%2BD38XmsVCgtw%3D%3D 11805826
-
Gavin AC et al (2002) Functional organization of the yeast proteome by systematic analysis of protein complexes. Nature 415(6868):141-147
-
(2002)
Nature
, vol.415
, Issue.6868
, pp. 141-147
-
-
Gavin, A.C.1
-
25
-
-
0037050004
-
Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry
-
DOI 10.1038/415180a
-
Ho Y et al (2002) Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry. Nature 415(6868):180-183 (Pubitemid 34059520)
-
(2002)
Nature
, vol.415
, Issue.6868
, pp. 180-183
-
-
Ho, Y.1
Gruhler, A.2
Heilbut, A.3
Bader, G.D.4
Moore, L.5
Adams, S.-L.6
Millar, A.7
Taylor, P.8
Bennett, K.9
Boutilier, K.10
Yang, L.11
Wolting, C.12
Donaldson, I.13
Schandorff, S.14
Shewnarane, J.15
Vo, M.16
Taggart, J.17
Goudreault, M.18
Muskat, B.19
Alfarano, C.20
Dewar, D.21
Lin, Z.22
Michalickova, K.23
Willems, A.R.24
Sassi, H.25
Nielsen, P.A.26
Rasmussen, K.J.27
Andersen, J.R.28
Johansen, L.E.29
Hansen, L.H.30
Jespersen, H.31
Podtelejnikov, A.32
Nielsen, E.33
Crawford, J.34
Poulsen, V.35
Sorensen, B.D.36
Matthiesen, J.37
Hendrickson, R.C.38
Gleeson, F.39
Pawson, T.40
Moran, M.F.41
Durocher, D.42
Mann, M.43
Hogue, C.W.V.44
Figeys, D.45
Tyers, M.46
more..
-
26
-
-
45849095234
-
Biochemistry. How do proteins interact?
-
1:CAS:528:DC%2BD1cXnsFKnu7c%3D 18556537
-
Boehr DD, Wright PE (2008) Biochemistry. How do proteins interact? Science 320(5882):1429-1430
-
(2008)
Science
, vol.320
, Issue.5882
, pp. 1429-1430
-
-
Boehr, D.D.1
Wright, P.E.2
-
27
-
-
34250821717
-
Mechanism of coupled folding and binding of an intrinsically disordered protein
-
DOI 10.1038/nature05858, PII NATURE05858
-
Sugase K, Dyson HJ, Wright PE (2007) Mechanism of coupled folding and binding of an intrinsically disordered protein. Nature 447(7147):1021-1025 (Pubitemid 46975749)
-
(2007)
Nature
, vol.447
, Issue.7147
, pp. 1021-1025
-
-
Sugase, K.1
Dyson, H.J.2
Wright, P.E.3
-
28
-
-
79959896639
-
Building protein-protein interaction networks with proteomics and informatics tools
-
1:CAS:528:DC%2BC3MXot1Glsr4%3D 21566121
-
Sardiu ME, Washburn MP (2011) Building protein-protein interaction networks with proteomics and informatics tools. J Biol Chem 286(27):23645-23651
-
(2011)
J Biol Chem
, vol.286
, Issue.27
, pp. 23645-23651
-
-
Sardiu, M.E.1
Washburn, M.P.2
-
29
-
-
41649117883
-
A new way to explore the world of extracellular protein interactions
-
DOI 10.1101/gr.074583.107
-
Sanderson CM (2008) A new way to explore the world of extracellular protein interactions. Genome Res 18(4):517-520 (Pubitemid 351482776)
-
(2008)
Genome Research
, vol.18
, Issue.4
, pp. 517-520
-
-
Sanderson, C.M.1
-
31
-
-
34047168855
-
Comparison of human protein-protein interaction maps
-
DOI 10.1093/bioinformatics/btl683
-
Futschik ME, Chaurasia G, Herzel H (2007) Comparison of human protein-protein interaction maps. Bioinformatics 23(5):605-611 (Pubitemid 46522594)
-
(2007)
Bioinformatics
, vol.23
, Issue.5
, pp. 605-611
-
-
Futschik, M.E.1
Chaurasia, G.2
Herzel, H.3
-
33
-
-
0037161731
-
Comparative assessment of large-scale data sets of protein-protein interactions
-
von Mering C et al (2002) Comparative assessment of large-scale data sets of protein-protein interactions. Nature 417(6887):399-403 (Pubitemid 34563526)
-
(2002)
Nature
, vol.417
, Issue.6887
, pp. 399-403
-
-
Von Mering, C.1
Krause, R.2
Snel, B.3
Cornell, M.4
Oliver, S.G.5
Fields, S.6
Bork, P.7
-
34
-
-
33746622998
-
Protein-protein interactions more conserved within species than across species
-
1513270 16854211
-
Mika S, Rost B (2006) Protein-protein interactions more conserved within species than across species. PLoS Comput Biol 2(7):e79
-
(2006)
PLoS Comput Biol
, vol.2
, Issue.7
, pp. 79
-
-
Mika, S.1
Rost, B.2
-
35
-
-
60649101828
-
Improved homology-driven computational validation of protein-protein interactions motivated by the evolutionary gene duplication and divergence hypothesis
-
2637843 19152684
-
Frech C et al (2009) Improved homology-driven computational validation of protein-protein interactions motivated by the evolutionary gene duplication and divergence hypothesis. BMC Bioinformatics 10:21
-
(2009)
BMC Bioinformatics
, vol.10
, pp. 21
-
-
Frech, C.1
-
36
-
-
0027174586
-
Use of the two-hybrid system to identify the domain of p53 involved in oligomerization
-
Iwabuchi K et al (1993) Use of the two-hybrid system to identify the domain of p53 involved in oligomerization. Oncogene 8(6):1693-1696 (Pubitemid 23189068)
-
(1993)
Oncogene
, vol.8
, Issue.6
, pp. 1693-1696
-
-
Iwabuchi, K.1
Li, B.2
Bartel, P.3
Fields, S.4
-
37
-
-
0024406857
-
A novel genetic system to detect protein-protein interactions
-
DOI 10.1038/340245a0
-
Fields S, Song O (1989) A novel genetic system to detect protein-protein interactions. Nature 340(6230):245-246 (Pubitemid 19171591)
-
(1989)
Nature
, vol.340
, Issue.6230
, pp. 245-246
-
-
Fields, S.1
Song, O.-K.2
-
38
-
-
0037432528
-
How reliable are experimental protein-protein interaction data?
-
DOI 10.1016/S0022-2836(03)00239-0
-
Sprinzak E, Sattath S, Margalit H (2003) How reliable are experimental protein-protein interaction data? J Mol Biol 327(5):919-923 (Pubitemid 36363701)
-
(2003)
Journal of Molecular Biology
, vol.327
, Issue.5
, pp. 919-923
-
-
Sprinzak, E.1
Sattath, S.2
Margalit, H.3
-
40
-
-
84856511126
-
Yeast two-hybrid methods and their applications in drug discovery
-
1:CAS:528:DC%2BC38XhvFamu7o%3D 22130009
-
Hamdi A, Colas P (2012) Yeast two-hybrid methods and their applications in drug discovery. Trends Pharmacol Sci 33(2):109-118
-
(2012)
Trends Pharmacol Sci
, vol.33
, Issue.2
, pp. 109-118
-
-
Hamdi, A.1
Colas, P.2
-
41
-
-
77950650635
-
Plant protein-protein interaction network and interactome
-
1:CAS:528:DC%2BC3cXjtFajtrw%3D 20808522
-
Zhang Y, Gao P, Yuan JS (2010) Plant protein-protein interaction network and interactome. Curr Genomics 11(1):40-46
-
(2010)
Curr Genomics
, vol.11
, Issue.1
, pp. 40-46
-
-
Zhang, Y.1
Gao, P.2
Yuan, J.S.3
-
42
-
-
47849096465
-
Monitoring protein-protein interactions between the mammalian integral membrane transporters and PDZ-interacting partners using a modified split-ubiquitin membrane yeast two-hybrid system
-
DOI 10.1074/mcp.M800079-MCP200
-
Gisler SM et al (2008) Monitoring protein-protein interactions between the mammalian integral membrane transporters and PDZ-interacting partners using a modified split-ubiquitin membrane yeast two-hybrid system. Mol Cell Proteomics 7(7):1362-1377 (Pubitemid 352038278)
-
(2008)
Molecular and Cellular Proteomics
, vol.7
, Issue.7
, pp. 1362-1377
-
-
Gisler, S.M.1
Kittanakom, S.2
Fuster, D.3
Wong, V.4
Bertic, M.5
Radanovic, T.6
Hali, R.A.7
Murer, H.8
Biber, J.9
Markovich, D.10
Moe, O.W.11
Stagljar, I.12
-
43
-
-
77954249974
-
Detecting interactions with membrane proteins using a membrane two-hybrid assay in yeast
-
1:CAS:528:DC%2BC3cXot1Wrtr0%3D 20595957
-
Snider J et al (2010) Detecting interactions with membrane proteins using a membrane two-hybrid assay in yeast. Nat Protoc 5(7):1281-1293
-
(2010)
Nat Protoc
, vol.5
, Issue.7
, pp. 1281-1293
-
-
Snider, J.1
-
45
-
-
79551523294
-
Interactive proteomics research technologies: Recent applications and advances
-
1:CAS:528:DC%2BC3MXhs1egt70%3D 20884196
-
Petschnigg J, Snider J, Stagljar I (2011) Interactive proteomics research technologies: recent applications and advances. Curr Opin Biotechnol 22(1):50-58
-
(2011)
Curr Opin Biotechnol
, vol.22
, Issue.1
, pp. 50-58
-
-
Petschnigg, J.1
Snider, J.2
Stagljar, I.3
-
47
-
-
0032497564
-
The Ras recruitment system, a novel approach to the study of protein-protein interactions
-
Broder YC, Katz S, Aronheim A (1998) The ras recruitment system, a novel approach to the study of protein-protein interactions. Curr Biol 8(20):1121-1124 (Pubitemid 28501375)
-
(1998)
Current Biology
, vol.8
, Issue.20
, pp. 1121-1124
-
-
Broder, Y.C.1
Katz, S.2
Aronheim, A.3
-
48
-
-
0033215038
-
Ternary complex formation between the MADS-box proteins SQUAMOSA, DEFICIENS and GLOBOSA is involved in the control of floral architecture in Antirrhinum majus
-
DOI 10.1093/emboj/18.19.5370
-
Egea-Cortines M, Saedler H, Sommer H (1999) Ternary complex formation between the MADS-box proteins SQUAMOSA, DEFICIENS and GLOBOSA is involved in the control of floral architecture in Antirrhinum majus. EMBO J 18(19):5370-5379 (Pubitemid 29465586)
-
(1999)
EMBO Journal
, vol.18
, Issue.19
, pp. 5370-5379
-
-
Egea-Cortines, M.1
Saedler, H.2
Sommer, H.3
-
49
-
-
0031453678
-
Understanding gene and allele function with two-hybrid methods
-
DOI 10.1146/annurev.genet.31.1.663
-
Brent R, Finley RL Jr (1997) Understanding gene and allele function with two-hybrid methods. Annu Rev Genet 31:663-704 (Pubitemid 28023723)
-
(1997)
Annual Review of Genetics
, vol.31
, pp. 663-704
-
-
Brent, R.1
Finley Jr., R.L.2
-
50
-
-
0035056231
-
Two-hybrid dual bait system to discriminate specificity of protein interactions in small GTPases
-
DOI 10.1016/S0076-6879(01)32210-3
-
Serebriiskii IG et al (2001) Two-hybrid dual bait system to discriminate specificity of protein interactions in small GTPases. Methods Enzymol 332:277-300 (Pubitemid 32275390)
-
(2001)
Methods in Enzymology
, vol.332
, pp. 277-300
-
-
Serebriiskii, I.G.1
Mitina, O.V.2
Chernoff, J.3
Golemis, E.A.4
-
51
-
-
0036914106
-
Analysing protein-protein interactions with the yeast two-hybrid system
-
DOI 10.1023/A:1021214007897
-
Causier B, Davies B (2002) Analysing protein-protein interactions with the yeast two-hybrid system. Plant Mol Biol 50(6):855-870 (Pubitemid 36028898)
-
(2002)
Plant Molecular Biology
, vol.50
, Issue.6
, pp. 855-870
-
-
Causier, B.1
Davies, B.2
-
52
-
-
78650842305
-
A two-hybrid assay to study protein interactions within the secretory pathway
-
1:CAS:528:DC%2BC3MXlslyrug%3D%3D 3011011 21209940
-
Dube DH et al (2010) A two-hybrid assay to study protein interactions within the secretory pathway. PLoS One 5(12):e15648
-
(2010)
PLoS One
, vol.5
, Issue.12
, pp. 15648
-
-
Dube, D.H.1
-
53
-
-
12144291328
-
Specific interaction of ERp57 and calnexin determined by NMR spectroscopy and an ER two-hybrid system
-
DOI 10.1038/sj.emboj.7600119
-
Pollock S et al (2004) Specific interaction of ERp57 and calnexin determined by NMR spectroscopy and an ER two-hybrid system. EMBO J 23(5):1020-1029 (Pubitemid 38436867)
-
(2004)
EMBO Journal
, vol.23
, Issue.5
, pp. 1020-1029
-
-
Pollock, S.1
Kozlov, G.2
Pelletier, M.-F.3
Trempe, J.-F.4
Jansen, G.5
Sitnikov, D.6
Bergeron, J.J.M.7
Gehring, K.8
Ekiel, I.9
Thomas, D.Y.10
-
55
-
-
33745711847
-
Identification of phytochrome-interacting protein candidates in Arabidopsis thaliana by co-immunoprecipitation coupled with MALDI-TOF MS
-
1:CAS:528:DC%2BD28Xms1Cksbg%3D 16705748
-
Phee BK et al (2006) Identification of phytochrome-interacting protein candidates in Arabidopsis thaliana by co-immunoprecipitation coupled with MALDI-TOF MS. Proteomics 6(12):3671-3680
-
(2006)
Proteomics
, vol.6
, Issue.12
, pp. 3671-3680
-
-
Phee, B.K.1
-
57
-
-
38949178970
-
Biochemical approaches for discovering protein-protein interactions
-
DOI 10.1111/j.1365-313X.2007.03316.x
-
Miernyk JA, Thelen JJ (2008) Biochemical approaches for discovering protein-protein interactions. Plant J 53(4):597-609 (Pubitemid 351232833)
-
(2008)
Plant Journal
, vol.53
, Issue.4
, pp. 597-609
-
-
Miernyk, J.A.1
Thelen, J.J.2
-
59
-
-
0032828715
-
A generic protein purification method for protein complex characterization and proteome exploration
-
DOI 10.1038/13732
-
Rigaut G et al (1999) A generic protein purification method for protein complex characterization and proteome exploration. Nat Biotechnol 17(10):1030-1032 (Pubitemid 29474865)
-
(1999)
Nature Biotechnology
, vol.17
, Issue.10
, pp. 1030-1032
-
-
Rigaut, G.1
Shevchenko, A.2
Rutz, B.3
Wilm, M.4
Mann, M.5
Seraphin, B.6
-
60
-
-
84872020270
-
Cell biology of the endoplasmic reticulum and the Golgi apparatus through proteomics
-
23284051
-
Smirle J et al (2013) Cell biology of the endoplasmic reticulum and the Golgi apparatus through proteomics. Cold Spring Harb Perspect Biol 5(1):a015073. doi: 10.1101/cshperspect.a015073
-
(2013)
Cold Spring Harb Perspect Biol
, vol.5
, Issue.1
, pp. 015073
-
-
Smirle, J.1
-
61
-
-
84865722729
-
An interaction map of endoplasmic reticulum chaperones and foldases
-
1:CAS:528:DC%2BC38XhtlOjsLzP 22665516
-
Jansen G et al (2012) An interaction map of endoplasmic reticulum chaperones and foldases. Mol Cell Proteomics 11(9):710-723
-
(2012)
Mol Cell Proteomics
, vol.11
, Issue.9
, pp. 710-723
-
-
Jansen, G.1
-
62
-
-
34547131554
-
Analysis of protein complexes using mass spectrometry
-
1:CAS:528:DC%2BD2sXotVahtro%3D 17593931
-
Gingras AC et al (2007) Analysis of protein complexes using mass spectrometry. Nat Rev Mol Cell Biol 8(8):645-654
-
(2007)
Nat Rev Mol Cell Biol
, vol.8
, Issue.8
, pp. 645-654
-
-
Gingras, A.C.1
-
64
-
-
33749372201
-
Role of analytical ultracentrifugation in assessing the aggregation of protein biopharmaceuticals
-
1:CAS:528:DC%2BD28XhtV2iurnN 17025277
-
Berkowitz SA (2006) Role of analytical ultracentrifugation in assessing the aggregation of protein biopharmaceuticals. AAPS J 8(3):E590-E605
-
(2006)
AAPS J
, vol.8
, Issue.3
-
-
Berkowitz, S.A.1
-
65
-
-
33748742268
-
Is any measurement method optimal for all aggregate sizes and types?
-
1:CAS:528:DC%2BD28XhtVGltLnI 17025274
-
Philo JS (2006) Is any measurement method optimal for all aggregate sizes and types? AAPS J 8(3):E564-E571
-
(2006)
AAPS J
, vol.8
, Issue.3
-
-
Philo, J.S.1
-
66
-
-
33749452453
-
A critical review of analytical ultracentrifugation and field flow fractionation methods for measuring protein aggregation
-
1:CAS:528:DC%2BD28XhtV2iurnM 17025276
-
Liu J, Andya JD, Shire SJ (2006) A critical review of analytical ultracentrifugation and field flow fractionation methods for measuring protein aggregation. AAPS J 8(3):E580-E589
-
(2006)
AAPS J
, vol.8
, Issue.3
-
-
Liu, J.1
Andya, J.D.2
Shire, S.J.3
-
67
-
-
79955580820
-
Analytical ultracentrifugation combined with X-ray and neutron scattering: Experiment and modelling
-
1:CAS:528:DC%2BC3MXlvVCht7s%3D 21256219
-
Perkins SJ et al (2011) Analytical ultracentrifugation combined with X-ray and neutron scattering: experiment and modelling. Methods 54(1):181-199
-
(2011)
Methods
, vol.54
, Issue.1
, pp. 181-199
-
-
Perkins, S.J.1
-
68
-
-
33748565349
-
Analytical ultracentrifugation for the study of protein association and assembly
-
DOI 10.1016/j.cbpa.2006.08.017, PII S1367593106001244, Analytical Techniques/Mechanisms
-
Howlett GJ, Minton AP, Rivas G (2006) Analytical ultracentrifugation for the study of protein association and assembly. Curr Opin Chem Biol 10(5):430-436 (Pubitemid 44375070)
-
(2006)
Current Opinion in Chemical Biology
, vol.10
, Issue.5
, pp. 430-436
-
-
Howlett, G.J.1
Minton, A.P.2
Rivas, G.3
-
69
-
-
0034737606
-
Quantitative characterization of reversible macromolecular associations via sedimentation equilibrium: An introduction
-
Minton AP (2000) Quantitative characterization of reversible macromolecular associations via sedimentation equilibrium: an introduction. Exp Mol Med 32(1):1-5 (Pubitemid 30179594)
-
(2000)
Experimental and Molecular Medicine
, vol.32
, Issue.1
, pp. 1-5
-
-
Minton, A.P.1
-
70
-
-
1842428822
-
Calculating sedimentation coefficient distributions by direct modeling of sedimentation velocity concentration profiles
-
DOI 10.1016/S0076-6879(04)84012-6
-
Dam J, Schuck P (2004) Calculating sedimentation coefficient distributions by direct modeling of sedimentation velocity concentration profiles. Methods Enzymol 384:185-212 (Pubitemid 38420481)
-
(2004)
Methods in Enzymology
, vol.384
, pp. 185-212
-
-
Dam, J.1
Schuck, P.2
-
71
-
-
80052339796
-
The use of analytical sedimentation velocity to extract thermodynamic linkage
-
1:CAS:528:DC%2BC3MXhtFeku7zL 3166974 21703752
-
Cole JL, Correia JJ, Stafford WF (2011) The use of analytical sedimentation velocity to extract thermodynamic linkage. Biophys Chem 159(1):120-128
-
(2011)
Biophys Chem
, vol.159
, Issue.1
, pp. 120-128
-
-
Cole, J.L.1
Correia, J.J.2
Stafford, W.F.3
-
72
-
-
0033917806
-
Analysis of weight average sedimentation velocity data
-
Correia JJ (2000) Analysis of weight average sedimentation velocity data. Methods Enzymol 321:81-100 (Pubitemid 30457540)
-
(2000)
Methods in Enzymology
, vol.321
, pp. 81-100
-
-
Correia, J.J.1
-
73
-
-
77954592227
-
Analysis of PKR activation using analytical ultracentrifugation
-
1:CAS:528:DC%2BC3cXovFCgsr4%3D 2926283 20533534
-
Cole JL (2010) Analysis of PKR activation using analytical ultracentrifugation. Macromol Biosci 10(7):703-713
-
(2010)
Macromol Biosci
, vol.10
, Issue.7
, pp. 703-713
-
-
Cole, J.L.1
-
74
-
-
1442274756
-
Sedimentation equilibrium analysis of protein interactions with global implicit mass conservation constraints and systematic noise decomposition
-
DOI 10.1016/j.ab.2003.12.014, PII S0003269704000363
-
Vistica J et al (2004) Sedimentation equilibrium analysis of protein interactions with global implicit mass conservation constraints and systematic noise decomposition. Anal Biochem 326(2):234-256 (Pubitemid 38293385)
-
(2004)
Analytical Biochemistry
, vol.326
, Issue.2
, pp. 234-256
-
-
Vistica, J.1
Dam, J.2
Balbo, A.3
Yikilmaz, E.4
Mariuzza, R.A.5
Rouault, T.A.6
Schuck, P.7
-
75
-
-
79955575021
-
The analysis of macromolecular interactions by sedimentation equilibrium
-
1:CAS:528:DC%2BC3MXlvVCht74%3D 3090454 21167941
-
Ghirlando R (2011) The analysis of macromolecular interactions by sedimentation equilibrium. Methods 54(1):145-156
-
(2011)
Methods
, vol.54
, Issue.1
, pp. 145-156
-
-
Ghirlando, R.1
-
76
-
-
79955609636
-
Using Lamm-Equation modeling of sedimentation velocity data to determine the kinetic and thermodynamic properties of macromolecular interactions
-
1:CAS:528:DC%2BC3MXlvVCht7Y%3D 3147155 21187153
-
Brautigam CA (2011) Using Lamm-Equation modeling of sedimentation velocity data to determine the kinetic and thermodynamic properties of macromolecular interactions. Methods 54(1):4-15
-
(2011)
Methods
, vol.54
, Issue.1
, pp. 4-15
-
-
Brautigam, C.A.1
-
77
-
-
81855192712
-
Identifying transient protein-protein interactions in EphB2 signaling by blue native PAGE and mass spectrometry
-
1:CAS:528:DC%2BC3MXhtlOnu7bP 3563432 21932443
-
Darie CC et al (2011) Identifying transient protein-protein interactions in EphB2 signaling by blue native PAGE and mass spectrometry. Proteomics 11(23):4514-4528
-
(2011)
Proteomics
, vol.11
, Issue.23
, pp. 4514-4528
-
-
Darie, C.C.1
-
78
-
-
3242721602
-
Confocal microscopy for intracellular co-localization of proteins
-
1:CAS:528:DC%2BD2cXjslyisr0%3D 15064472
-
Miyashita T (2004) Confocal microscopy for intracellular co-localization of proteins. Methods Mol Biol 261:399-410
-
(2004)
Methods Mol Biol
, vol.261
, pp. 399-410
-
-
Miyashita, T.1
-
79
-
-
0033548686
-
Fluorescence spectroscopy of single biomolecules
-
1:CAS:528:DyaK1MXhvFSgtbk%3D 10073925
-
Weiss S (1999) Fluorescence spectroscopy of single biomolecules. Science 283(5408):1676-1683
-
(1999)
Science
, vol.283
, Issue.5408
, pp. 1676-1683
-
-
Weiss, S.1
-
80
-
-
0031663369
-
The green fluorescent protein
-
DOI 10.1146/annurev.biochem.67.1.509
-
Tsien RY (1998) The green fluorescent protein. Annu Rev Biochem 67:509-544 (Pubitemid 28411137)
-
(1998)
Annual Review of Biochemistry
, vol.67
, pp. 509-544
-
-
Tsien, R.Y.1
-
81
-
-
0034083428
-
Recent advances in technology for measuring and manipulating cell signals
-
DOI 10.1016/S0959-4388(00)00101-X
-
Zacharias DA, Baird GS, Tsien RY (2000) Recent advances in technology for measuring and manipulating cell signals. Curr Opin Neurobiol 10(3):416-421 (Pubitemid 30389311)
-
(2000)
Current Opinion in Neurobiology
, vol.10
, Issue.3
, pp. 416-421
-
-
Zacharias, D.A.1
Baird, G.S.2
Tsien, R.Y.3
-
82
-
-
0014213139
-
New reflected-light microscope for viewing unstained brain and ganglion cells
-
1:STN:280:DyaF2s3gtFegug%3D%3D 6030094
-
Egger MD, Petran M (1967) New reflected-light microscope for viewing unstained brain and ganglion cells. Science 157(3786):305-307
-
(1967)
Science
, vol.157
, Issue.3786
, pp. 305-307
-
-
Egger, M.D.1
Petran, M.2
-
83
-
-
0015919993
-
Photomicrography of corneal endothelial cells in vivo
-
1:STN:280:DyaE2c%2FhtlGisw%3D%3D 4583510
-
Davidovits P, Egger MD (1973) Photomicrography of corneal endothelial cells in vivo. Nature 244(5415):366-367
-
(1973)
Nature
, vol.244
, Issue.5415
, pp. 366-367
-
-
Davidovits, P.1
Egger, M.D.2
-
84
-
-
0141728404
-
How the confocal laser scanning microscope entered biological research
-
DOI 10.1016/S0248-4900(03)00078-9
-
Amos WB, White JG (2003) How the confocal laser scanning microscope entered biological research. Biol Cell 95(6):335-342 (Pubitemid 37220801)
-
(2003)
Biology of the Cell
, vol.95
, Issue.6
, pp. 335-342
-
-
Amos, W.B.1
White, J.G.2
-
85
-
-
0018462482
-
Effect of spherical aberration on the imaging properties of scanning optical microscopes
-
Sheppard CJ, Wilson T (1979) Effect of spherical aberration on the imaging properties of scanning optical microscopes. Appl Opt 18(7):1058-1063 (Pubitemid 9135619)
-
(1979)
Applied Optics
, vol.18
, Issue.7
, pp. 1058-1063
-
-
Sheppard, C.J.R.1
Wilson, T.2
-
86
-
-
34548418142
-
Methods for the detection and analysis of protein-protein interactions
-
DOI 10.1002/pmic.200700131
-
Berggard T, Linse S, James P (2007) Methods for the detection and analysis of protein-protein interactions. Proteomics 7(16):2833-2842 (Pubitemid 47359924)
-
(2007)
Proteomics
, vol.7
, Issue.16
, pp. 2833-2842
-
-
Berggard, T.1
Linse, S.2
James, P.3
-
87
-
-
70350759905
-
Analysis of biomolecules using surface plasmons
-
1:CAS:528:DC%2BC3cXltVSisQ%3D%3D 19488702
-
Willander M, Al-Hilli S (2009) Analysis of biomolecules using surface plasmons. Methods Mol Biol 544:201-229
-
(2009)
Methods Mol Biol
, vol.544
, pp. 201-229
-
-
Willander, M.1
Al-Hilli, S.2
-
88
-
-
47549106882
-
Applications of isothermal titration calorimetry in protein science
-
DOI 10.1111/j.1745-7270.2008.00437.x
-
Liang Y (2008) Applications of isothermal titration calorimetry in protein science. Acta Biochim Biophys Sin (Shanghai) 40(7):565-576 (Pubitemid 352009079)
-
(2008)
Acta Biochimica et Biophysica Sinica
, vol.40
, Issue.7
, pp. 565-576
-
-
Liang, Y.1
-
89
-
-
78650894342
-
Survey of the year 2009: Applications of isothermal titration calorimetry
-
1:CAS:528:DC%2BC3MXjs1Ch 21157775
-
Falconer RJ, Collins BM (2011) Survey of the year 2009: applications of isothermal titration calorimetry. J Mol Recognit 24(1):1-16
-
(2011)
J Mol Recognit
, vol.24
, Issue.1
, pp. 1-16
-
-
Falconer, R.J.1
Collins, B.M.2
-
90
-
-
33750565735
-
Biomolecular interaction analysis in drug discovery using surface plasmon resonance technology
-
DOI 10.2174/138161206778743600
-
Huber W, Mueller F (2006) Biomolecular interaction analysis in drug discovery using surface plasmon resonance technology. Curr Pharm Des 12(31):3999-4021 (Pubitemid 44669759)
-
(2006)
Current Pharmaceutical Design
, vol.12
, Issue.31
, pp. 3999-4021
-
-
Huber, W.1
Mueller, F.2
-
91
-
-
0141754043
-
Measurements of protein-protein interactions by size exclusion chromatography
-
Bloustine J, Berejnov V, Fraden S (2003) Measurements of protein-protein interactions by size exclusion chromatography. Biophys J 85(4):2619-2623 (Pubitemid 37210807)
-
(2003)
Biophysical Journal
, vol.85
, Issue.4
, pp. 2619-2623
-
-
Bloustine, J.1
Berejnov, V.2
Fraden, S.3
-
92
-
-
77049126857
-
Size-exclusion chromatography can identify faster-associating protein complexes and evaluate design strategies
-
2717102 19604395
-
Mayer CL et al (2009) Size-exclusion chromatography can identify faster-associating protein complexes and evaluate design strategies. BMC Res Notes 2:135
-
(2009)
BMC Res Notes
, vol.2
, pp. 135
-
-
Mayer, C.L.1
-
93
-
-
77049124756
-
Free-solution, label-free protein-protein interactions characterized by dynamic light scattering
-
1:CAS:528:DC%2BC3cXkslWisbo%3D 2808485 20338851
-
Hanlon AD, Larkin MI, Reddick RM (2010) Free-solution, label-free protein-protein interactions characterized by dynamic light scattering. Biophys J 98(2):297-304
-
(2010)
Biophys J
, vol.98
, Issue.2
, pp. 297-304
-
-
Hanlon, A.D.1
Larkin, M.I.2
Reddick, R.M.3
-
94
-
-
33645984885
-
Rapid quantitative characterization of protein interactions by composition gradient static light scattering
-
1:CAS:528:DC%2BD28Xis1CktbY%3D 1386794 16387762
-
Kameyama K, Minton AP (2006) Rapid quantitative characterization of protein interactions by composition gradient static light scattering. Biophys J 90(6):2164-2169
-
(2006)
Biophys J
, vol.90
, Issue.6
, pp. 2164-2169
-
-
Kameyama, K.1
Minton, A.P.2
-
95
-
-
0037039335
-
Mapping protein-protein interactions in solution by NMR spectroscopy
-
DOI 10.1021/bi011870b
-
Zuiderweg ER (2002) Mapping protein-protein interactions in solution by NMR spectroscopy. Biochemistry 41(1):1-7 (Pubitemid 34049375)
-
(2002)
Biochemistry
, vol.41
, Issue.1
, pp. 1-7
-
-
Zuiderweg, E.R.P.1
-
96
-
-
73249139292
-
The structural analysis of protein-protein interactions by NMR spectroscopy
-
19834907
-
O'Connell MR, Gamsjaeger R, Mackay JP (2009) The structural analysis of protein-protein interactions by NMR spectroscopy. Proteomics 9(23):5224-5232
-
(2009)
Proteomics
, vol.9
, Issue.23
, pp. 5224-5232
-
-
O'Connell, M.R.1
Gamsjaeger, R.2
MacKay, J.P.3
-
97
-
-
32144432437
-
The SWISS-MODEL workspace: A web-based environment for protein structure homology modelling
-
DOI 10.1093/bioinformatics/bti770
-
Arnold K et al (2006) The SWISS-MODEL workspace: a web-based environment for protein structure homology modelling. Bioinformatics 22(2):195-201 (Pubitemid 43205406)
-
(2006)
Bioinformatics
, vol.22
, Issue.2
, pp. 195-201
-
-
Arnold, K.1
Bordoli, L.2
Kopp, J.3
Schwede, T.4
-
98
-
-
43749107283
-
Comparative protein structure modeling using Modeller
-
Unit 5.6
-
Eswar N et al (2006) Comparative protein structure modeling using Modeller. Curr Protoc Bioinformatics Chapter 5: p. Unit 5.6
-
(2006)
Curr Protoc Bioinformatics Chapter 5
-
-
Eswar, N.1
-
99
-
-
84869175510
-
-
Accelrys-Software-Inc Release 3.1, San Diego. Accelrys Software Inc. 1
-
Accelrys-Software-Inc (2012) Discovery Studio Modeling Environment, Release 3.1, San Diego. Accelrys Software Inc. 1: p 1-1
-
(2012)
Discovery Studio Modeling Environment
, pp. 1-1
-
-
-
100
-
-
3242887695
-
Protein structure prediction and analysis using the Robetta server
-
1:CAS:528:DC%2BD2cXlvFKmsrY%3D 441606 15215442 Web Server issue
-
Kim DE, Chivian D, Baker D (2004) Protein structure prediction and analysis using the Robetta server. Nucleic Acids Res 32:W526-W531 Web Server issue
-
(2004)
Nucleic Acids Res
, vol.32
-
-
Kim, D.E.1
Chivian, D.2
Baker, D.3
-
101
-
-
77954065271
-
I-TASSER: A unified platform for automated protein structure and function prediction
-
1:CAS:528:DC%2BC3cXksVahs74%3D 2849174 20360767
-
Roy A, Kucukural A, Zhang Y (2010) I-TASSER: a unified platform for automated protein structure and function prediction. Nat Protoc 5(4):725-738
-
(2010)
Nat Protoc
, vol.5
, Issue.4
, pp. 725-738
-
-
Roy, A.1
Kucukural, A.2
Zhang, Y.3
-
102
-
-
80054685109
-
Critical assessment of methods of protein structure prediction (CASP)-round IX
-
1:CAS:528:DC%2BC3MXhs12nsL7O 21997831
-
Moult J et al (2011) Critical assessment of methods of protein structure prediction (CASP)-round IX. Proteins 79(Suppl 10):1-5
-
(2011)
Proteins
, vol.79
, Issue.SUPPL. 10
, pp. 1-5
-
-
Moult, J.1
-
103
-
-
18744377988
-
Bioinformatics in drug development and assessment
-
DOI 10.1081/DMR-200055225
-
Wishart DS (2005) Bioinformatics in drug development and assessment. Drug Metab Rev 37(2):279-310 (Pubitemid 40677506)
-
(2005)
Drug Metabolism Reviews
, vol.37
, Issue.2
, pp. 279-310
-
-
Wishart, D.S.1
-
104
-
-
84872818942
-
Structural Investigation of Tumor Differentiation Factor (TDF)
-
1:CAS:528:DC%2BC3sXitFyitQ%3D%3D 23586953
-
Roy U et al (2012) Structural Investigation of Tumor Differentiation Factor (TDF). Biotechnol Appl Biochem 59(6):445-450
-
(2012)
Biotechnol Appl Biochem
, vol.59
, Issue.6
, pp. 445-450
-
-
Roy, U.1
-
105
-
-
84863447582
-
Identification of a potential tumor differentiation factor receptor candidate in prostate cancer cells
-
1:CAS:528:DC%2BC38XpvFKnurw%3D 22613557
-
Sokolowska I et al (2012) Identification of a potential tumor differentiation factor receptor candidate in prostate cancer cells. FEBS J 279(14):2579-2594
-
(2012)
FEBS J
, vol.279
, Issue.14
, pp. 2579-2594
-
-
Sokolowska, I.1
-
106
-
-
84855854555
-
Identification of potential tumor differentiation factor (TDF) receptor from steroid-responsive and steroid-resistant breast cancer cells
-
1:CAS:528:DC%2BC38XmtlGmug%3D%3D 22130669
-
Sokolowska I et al (2012) Identification of potential tumor differentiation factor (TDF) receptor from steroid-responsive and steroid-resistant breast cancer cells. J Biol Chem 287(3):1719-1733
-
(2012)
J Biol Chem
, vol.287
, Issue.3
, pp. 1719-1733
-
-
Sokolowska, I.1
-
107
-
-
84881172462
-
Characterization of Tumor Differentiation Factor (TDF) and its receptor (TDF-R)
-
doi: 10.1007/s00018-012-1185-0
-
Sokolowska I et al (2012) Characterization of Tumor Differentiation Factor (TDF) and its receptor (TDF-R) Cell Mol Life Sci. doi: 10.1007/s00018-012-1185-0
-
(2012)
Cell Mol Life Sci.
-
-
Sokolowska, I.1
-
108
-
-
84931582769
-
Mass spectrometry for proteomics-based investigation of oxidative stress and heat shock proteins
-
Sokolowska I et al (2011) Mass Spectrometry for Proteomics-based Investigation of Oxidative Stress and Heat Shock Proteins, In Oxidative Stress: Diagnostics and Therapy
-
(2011)
Oxidative Stress: Diagnostics and Therapy
-
-
Sokolowska, I.1
-
109
-
-
3242881211
-
SuperPose: A simple server for sophisticated structural superposition
-
1:CAS:528:DC%2BD2cXlvFKmsL0%3D 441615 15215457 Web Server issue
-
Maiti R et al (2004) SuperPose: a simple server for sophisticated structural superposition. Nucleic Acids Res 32:W590-W594 Web Server issue
-
(2004)
Nucleic Acids Res
, vol.32
-
-
Maiti, R.1
-
110
-
-
21644458085
-
Development and testing of an automated approach to protein docking
-
DOI 10.1002/prot.20573
-
Tovchigrechko A, Vakser IA (2005) Development and testing of an automated approach to protein docking. Proteins 60(2):296-301 (Pubitemid 40934902)
-
(2005)
Proteins: Structure, Function and Genetics
, vol.60
, Issue.2
, pp. 296-301
-
-
Tovchigrechko, A.1
Vakser, I.A.2
-
111
-
-
33747840389
-
GRAMM-X public web server for protein-protein docking
-
1:CAS:528:DC%2BD28Xps1yiu7k%3D 1538913 16845016 Web Server issue
-
Tovchigrechko A, Vakser IA (2006) GRAMM-X public web server for protein-protein docking. Nucleic Acids Res 34:W310-W314 Web Server issue
-
(2006)
Nucleic Acids Res
, vol.34
-
-
Tovchigrechko, A.1
Vakser, I.A.2
-
113
-
-
48449092207
-
FireDock: A web server for fast interaction refinement in molecular docking
-
1:CAS:528:DC%2BD1cXptlKku7o%3D 2447790 18424796 Web Server issue
-
Mashiach E et al (2008) FireDock: a web server for fast interaction refinement in molecular docking. Nucleic Acids Res 36:W229-W232 Web Server issue
-
(2008)
Nucleic Acids Res
, vol.36
-
-
Mashiach, E.1
-
114
-
-
21644476468
-
PatchDock and SymmDock: Servers for rigid and symmetric docking
-
1:CAS:528:DC%2BD2MXlslyqtbo%3D 1160241 15980490 Web Server issue
-
Schneidman-Duhovny D et al (2005) PatchDock and SymmDock: servers for rigid and symmetric docking. Nucleic Acids Res 33:W363-W367 Web Server issue
-
(2005)
Nucleic Acids Res
, vol.33
-
-
Schneidman-Duhovny, D.1
-
116
-
-
0033578302
-
Cation-pi interactions in structural biology
-
1:CAS:528:DyaK1MXlsVymsr8%3D 10449714
-
Gallivan JP, Dougherty DA (1999) Cation-pi interactions in structural biology. Proc Natl Acad Sci USA 96(17):9459-9464
-
(1999)
Proc Natl Acad Sci USA
, vol.96
, Issue.17
, pp. 9459-9464
-
-
Gallivan, J.P.1
Dougherty, D.A.2
-
117
-
-
61449172037
-
Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources
-
1:CAS:528:DC%2BD1cXhsFCkurnI
-
da Huang W, Sherman BT, Lempicki RA (2009) Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources. Nat Protoc 4(1):44-57
-
(2009)
Nat Protoc
, vol.4
, Issue.1
, pp. 44-57
-
-
Da Huang, W.1
Sherman, B.T.2
Lempicki, R.A.3
-
118
-
-
33847205295
-
GENECODIS: A web-based tool for finding significant concurrent annotations in gene lists
-
1839127 17204154
-
Carmona-Saez P et al (2007) GENECODIS: a web-based tool for finding significant concurrent annotations in gene lists. Genome Biol 8(1):R3
-
(2007)
Genome Biol
, vol.8
, Issue.1
, pp. 3
-
-
Carmona-Saez, P.1
-
119
-
-
84858983547
-
KEGG for integration and interpretation of large-scale molecular data sets
-
1:CAS:528:DC%2BC3MXhs12htbrO 3245020 22080510 Database issue
-
Kanehisa M et al (2012) KEGG for integration and interpretation of large-scale molecular data sets. Nucleic Acids Res 40:D109-D114 Database issue
-
(2012)
Nucleic Acids Res
, vol.40
-
-
Kanehisa, M.1
-
120
-
-
34547588704
-
KAAS: An automatic genome annotation and pathway reconstruction server
-
1933193 17526522 Web Server issue
-
Moriya Y et al (2007) KAAS: an automatic genome annotation and pathway reconstruction server. Nucleic Acids Res 35:W182-W185 Web Server issue
-
(2007)
Nucleic Acids Res
, vol.35
-
-
Moriya, Y.1
-
121
-
-
0036088133
-
DIP, the Database of Interacting Proteins: A research tool for studying cellular networks of protein interactions
-
Xenarios I et al (2002) DIP, the database of interacting proteins: a research tool for studying cellular networks of protein interactions. Nucleic Acids Res 30(1):303-305 (Pubitemid 34679570)
-
(2002)
Nucleic Acids Research
, vol.30
, Issue.1
, pp. 303-305
-
-
Xenarios, I.1
Salwinski, L.2
Duan, X.J.3
Higney, P.4
Kim, S.-M.5
Eisenberg, D.6
-
122
-
-
84860918589
-
MINT, the molecular interaction database: 2012 update
-
1:CAS:528:DC%2BC3MXhs12hurbE 3244991 22096227 Database issue
-
Licata L et al (2012) MINT, the molecular interaction database: 2012 update. Nucleic Acids Res 40:D857-D861 Database issue
-
(2012)
Nucleic Acids Res
, vol.40
-
-
Licata, L.1
-
123
-
-
84859204939
-
The intact molecular interaction database in 2012
-
1:CAS:528:DC%2BC3MXhs12htbvI 3245075 22121220 Database issue
-
Kerrien S et al (2012) The intact molecular interaction database in 2012. Nucleic Acids Res 40:D841-D846 Database issue
-
(2012)
Nucleic Acids Res
, vol.40
-
-
Kerrien, S.1
-
124
-
-
20144387067
-
The MIPS mammalian protein-protein interaction database
-
DOI 10.1093/bioinformatics/bti115
-
Pagel P et al (2005) The MIPS mammalian protein-protein interaction database. Bioinformatics 21(6):832-834 (Pubitemid 40439425)
-
(2005)
Bioinformatics
, vol.21
, Issue.6
, pp. 832-834
-
-
Pagel, P.1
Kovac, S.2
Oesterheld, M.3
Brauner, B.4
Dunger-Kaltenbach, I.5
Frishman, G.6
Montrone, C.7
Mark, P.8
Stumpflen, V.9
Mewes, H.-W.10
Ruepp, A.11
Frishman, D.12
-
125
-
-
78651324347
-
The STRING database in 2011: Functional interaction networks of proteins, globally integrated and scored
-
1:CAS:528:DC%2BC3sXivF2lt7w%3D 3013807 21045058 Database issue
-
Szklarczyk D et al (2011) The STRING database in 2011: functional interaction networks of proteins, globally integrated and scored. Nucleic Acids Res 39:D561-D568 Database issue
-
(2011)
Nucleic Acids Res
, vol.39
-
-
Szklarczyk, D.1
-
126
-
-
58149193222
-
Human protein reference database-2009 update
-
1:STN:280:DC%2BD1M%2FitVCluw%3D%3D 2686490 18988627 Database issue
-
Keshava Prasad TS et al (2009) Human protein reference database-2009 update. Nucleic Acids Res 37:D767-D772 Database issue
-
(2009)
Nucleic Acids Res
, vol.37
-
-
Keshava Prasad, T.S.1
-
127
-
-
79551587720
-
Cytoscape 2.8: New features for data integration and network visualization
-
1:CAS:528:DC%2BC3MXhs1GisL0%3D 21149340
-
Smoot ME et al (2011) Cytoscape 2.8: new features for data integration and network visualization. Bioinformatics 27(3):431-432
-
(2011)
Bioinformatics
, vol.27
, Issue.3
, pp. 431-432
-
-
Smoot, M.E.1
-
128
-
-
2942588629
-
Structural characterization of fish egg vitelline envelope proteins by mass spectrometry
-
DOI 10.1021/bi0495937
-
Darie CC et al (2004) Structural characterization of fish egg vitelline envelope proteins by mass spectrometry. Biochemistry 43(23):7459-7478 (Pubitemid 38745763)
-
(2004)
Biochemistry
, vol.43
, Issue.23
, pp. 7459-7478
-
-
Darie, C.C.1
Biniossek, M.L.2
Jovine, L.3
Litscher, E.S.4
Wassarman, P.M.5
-
129
-
-
84865345103
-
Disulfide proteomics for identification of extracellular or secreted proteins
-
1:CAS:528:DC%2BC38Xht1Sku7jI 22899260
-
Sokolowska I et al (2012) Disulfide proteomics for identification of extracellular or secreted proteins. Electrophoresis 33(16):2527-2536
-
(2012)
Electrophoresis
, vol.33
, Issue.16
, pp. 2527-2536
-
-
Sokolowska, I.1
-
130
-
-
79955577766
-
Serum markers in acute appendicitis
-
1:CAS:528:DC%2BC3MXlsVCqur4%3D 20097375
-
Allister L et al (2011) Serum markers in acute appendicitis. J Surg Res 168(1):70-75
-
(2011)
J Surg Res
, vol.168
, Issue.1
, pp. 70-75
-
-
Allister, L.1
-
131
-
-
79551623131
-
Increased prothrombin, apolipoprotein A-IV, and haptoglobin in the cerebrospinal fluid of patients with Huntington's disease
-
1:CAS:528:DC%2BC3MXhvFaitb4%3D 3031520 21297956
-
Huang YC et al (2011) Increased prothrombin, apolipoprotein A-IV, and haptoglobin in the cerebrospinal fluid of patients with Huntington's disease. PLoS One 6(1):e15809
-
(2011)
PLoS One
, vol.6
, Issue.1
, pp. 15809
-
-
Huang, Y.C.1
-
132
-
-
34247139196
-
Proteomic identification of potential protein markers in cerebrospinal fluid of GBS patients
-
DOI 10.1111/j.1468-1331.2007.01761.x
-
Jin T et al (2007) Proteomic identification of potential protein markers in cerebrospinal fluid of GBS patients. Eur J Neurol 14(5):563-568 (Pubitemid 46587847)
-
(2007)
European Journal of Neurology
, vol.14
, Issue.5
, pp. 563-568
-
-
Jin, T.1
Hu, L.-S.2
Chang, M.3
Wu, J.4
Winblad, B.5
Zhu, J.6
-
133
-
-
33947270262
-
Urine biomarkers predict the cause of glomerular disease
-
DOI 10.1681/ASN.2006070767
-
Varghese SA et al (2007) Urine biomarkers predict the cause of glomerular disease. J Am Soc Nephrol 18(3):913-922 (Pubitemid 46434508)
-
(2007)
Journal of the American Society of Nephrology
, vol.18
, Issue.3
, pp. 913-922
-
-
Varghese, S.A.1
Powell, T.B.2
Budisavljevic, M.N.3
Oates, J.C.4
Raymond, J.R.5
Almeida, J.S.6
Arthur, J.M.7
-
134
-
-
84878338056
-
Blue Native PAGE and mass spectrometry as an approach for the investigation of stable and transient protein-protein interactions
-
Woods AG et al (2011) Blue Native PAGE and mass spectrometry as an approach for the investigation of stable and transient protein-protein interactions, In Oxidative Stress: Diagnostics and Therapy
-
(2011)
Oxidative Stress: Diagnostics and Therapy
-
-
Woods, A.G.1
-
135
-
-
84878326517
-
Automated mass spectrometry-based functional assay for the routine analysis of the secretome
-
doi: 10.1177/2211068212454738
-
Ngounou Wetie AG et al (2013) Automated Mass Spectrometry-Based Functional Assay for the Routine Analysis of the Secretome. J Lab Autom 18(1):19-29. doi: 10.1177/2211068212454738
-
(2013)
J Lab Autom
, vol.18
, Issue.1
, pp. 19-29
-
-
Ngounou Wetie, A.G.1
-
136
-
-
0013958696
-
Location of the disulphide bridges by diagonal paper electrophoresis
-
1:CAS:528:DyaF28XkslCksLo%3D 5971783
-
Brown JR, Hartley BS (1966) Location of the disulphide bridges by diagonal paper electrophoresis. Biochem J 101:214-228
-
(1966)
Biochem J
, vol.101
, pp. 214-228
-
-
Brown, J.R.1
Hartley, B.S.2
-
137
-
-
66149109179
-
Diagonal electrophoresis for detection of protein disulphide bridges
-
1:CAS:528:DC%2BD1MXlsFOjur8%3D 19381591
-
McDonagh B (2009) Diagonal electrophoresis for detection of protein disulphide bridges. Methods Mol Biol 519:305-310
-
(2009)
Methods Mol Biol
, vol.519
, pp. 305-310
-
-
McDonagh, B.1
-
139
-
-
27844487982
-
Mass spectrometric evidence that proteolytic processing of rainbow trout egg vitelline envelope proteins takes place on the egg
-
DOI 10.1074/jbc.M506709200
-
Darie CC et al (2005) Mass spectrometric evidence that proteolytic processing of rainbow trout egg vitelline envelope proteins takes place on the egg. J Biol Chem 280(45):37585-37598 (Pubitemid 41642367)
-
(2005)
Journal of Biological Chemistry
, vol.280
, Issue.45
, pp. 37585-37598
-
-
Darie, C.C.1
Biniossek, M.L.2
Gawinowicz, M.A.3
Milgrom, Y.4
Thumfart, J.O.5
Jovine, L.6
Litscher, E.S.7
Wassarman, P.M.8
-
140
-
-
45749144385
-
Stable isotopic labeling by amino acids in cultured primary neurons: Application to brain-derived neurotrophic factor-dependent phosphotyrosine- associated signaling
-
DOI 10.1074/mcp.M700387-MCP200
-
Spellman DS et al (2008) Stable isotopic labeling by amino acids in cultured primary neurons: application to brain-derived neurotrophic factor-dependent phosphotyrosine-associated signaling. Mol Cell Proteomics 7(6):1067-1076 (Pubitemid 351943954)
-
(2008)
Molecular and Cellular Proteomics
, vol.7
, Issue.6
, pp. 1067-1076
-
-
Spellman, D.S.1
Deinhardt, K.2
Darie, C.C.3
Chao, M.V.4
Neuebrt, T.A.5
-
142
-
-
36849049826
-
Purified mouse egg zona pellucida glycoproteins polymerize into homomeric fibrils under non-denaturing conditions
-
DOI 10.1002/jcp.21174
-
Litscher ES et al (2008) Purified mouse egg zona pellucida glycoproteins polymerize into homomeric fibrils under non-denaturing conditions. J Cell Physiol 214(1):153-157 (Pubitemid 350220069)
-
(2008)
Journal of Cellular Physiology
, vol.214
, Issue.1
, pp. 153-157
-
-
Litscher, E.S.1
Janssen, W.G.2
Darie, C.C.3
Wassarman, P.M.4
-
143
-
-
17044435416
-
Recent aspects of mammalian fertilization research
-
1:CAS:528:DC%2BD2MXjt1Sqtb4%3D 15836958
-
Wassarman PM et al (2005) Recent aspects of mammalian fertilization research. Mol Cell Endocrinol 234(1-2):95-103
-
(2005)
Mol Cell Endocrinol
, vol.234
, Issue.1-2
, pp. 95-103
-
-
Wassarman, P.M.1
-
144
-
-
49649106113
-
-
Applications of Mass Spectrometry in Life Safety, NATO Science for Peace and Security Series, Springer-Verlag, Düsseldorf, Germany
-
Darie CC, Litscher ES, Wassarman PM (2008) Structure, processing, and polymerization of rainbow trout egg vitelline envelope proteins. Applications of Mass Spectrometry in Life Safety, NATO Science for Peace and Security Series, Springer-Verlag, Düsseldorf, Germany pp 23-36
-
(2008)
Structure, Processing, and Polymerization of Rainbow Trout Egg Vitelline Envelope Proteins
, pp. 23-36
-
-
Darie, C.C.1
Litscher, E.S.2
Wassarman, P.M.3
-
145
-
-
0026409298
-
Blue native electrophoresis for isolation of membrane protein complexes in enzymatically active form
-
1:STN:280:DyaK383lsV2rug%3D%3D 1812789
-
Schagger H, von Jagow G (1991) Blue native electrophoresis for isolation of membrane protein complexes in enzymatically active form. Anal Biochem 199(2):223-231
-
(1991)
Anal Biochem
, vol.199
, Issue.2
, pp. 223-231
-
-
Schagger, H.1
Von Jagow, G.2
-
146
-
-
0028214450
-
Analysis of molecular masses and oligomeric states of protein complexes by blue native electrophoresis and isolation of membrane protein complexes by two-dimensional native electrophoresis
-
DOI 10.1006/abio.1994.1112
-
Schagger H, Cramer WA, von Jagow G (1994) Analysis of molecular masses and oligomeric states of protein complexes by blue native electrophoresis and isolation of membrane protein complexes by two-dimensional native electrophoresis. Anal Biochem 217(2):220-230 (Pubitemid 24080754)
-
(1994)
Analytical Biochemistry
, vol.217
, Issue.2
, pp. 220-230
-
-
Schagger, H.1
Cramer, W.A.2
Von Jagow, G.3
-
147
-
-
0028848239
-
Native electrophoresis for isolation of mitochondrial oxidative phosphorylation protein complexes
-
1:STN:280:DyaK287jtVOjtQ%3D%3D 8592444
-
Schagger H (1995) Native electrophoresis for isolation of mitochondrial oxidative phosphorylation protein complexes. Methods Enzymol 260:190-202
-
(1995)
Methods Enzymol
, vol.260
, pp. 190-202
-
-
Schagger, H.1
-
149
-
-
38049166046
-
The Cytotoxic lipid peroxidation product 4-hydroxy-2-nonenal covalently modifies a selective range of proteins linked to respiratory function in plant mitochondria
-
1:CAS:528:DC%2BD2sXhsVGjtrrN 17947244
-
Winger AM et al (2007) The Cytotoxic lipid peroxidation product 4-hydroxy-2-nonenal covalently modifies a selective range of proteins linked to respiratory function in plant mitochondria. J Biol Chem 282(52):37436-37447
-
(2007)
J Biol Chem
, vol.282
, Issue.52
, pp. 37436-37447
-
-
Winger, A.M.1
-
150
-
-
20044377210
-
Rapid purification and mass spectrometric characterization of mitochondrial NADH dehydrogenase (Complex I) from rodent brain and a dopaminergic neuronal cell line
-
DOI 10.1074/mcp.M400143-MCP200
-
Schilling B et al (2005) Rapid purification and mass spectrometric characterization of mitochondrial NADH dehydrogenase (Complex I) from rodent brain and a dopaminergic neuronal cell line. Mol Cell Proteomics 4(1):84-96 (Pubitemid 40309327)
-
(2005)
Molecular and Cellular Proteomics
, vol.4
, Issue.1
, pp. 84-96
-
-
Schilling, B.1
Srinivas Bharath, M.M.2
Row, R.H.3
Murray, J.4
Cusack, M.P.5
Capaldi, R.A.6
Freed, C.R.7
Prasad, K.N.8
Andersen, J.K.9
Gibson, B.W.10
-
151
-
-
67349189200
-
Proteomic analysis of protein complexes in human SH-SY5Y neuroblastoma cells by using blue-native gel electrophoresis: An increase in lamin A/C associated with heat shock protein 90 in response to 6-hydroxydopamine-induced oxidative stress
-
1:CAS:528:DC%2BD1MXms1yqur0%3D 19264120
-
Nakamura M et al (2009) Proteomic analysis of protein complexes in human SH-SY5Y neuroblastoma cells by using blue-native gel electrophoresis: an increase in lamin A/C associated with heat shock protein 90 in response to 6-hydroxydopamine-induced oxidative stress. Exp Gerontol 44(6-7):375-382
-
(2009)
Exp Gerontol
, vol.44
, Issue.6-7
, pp. 375-382
-
-
Nakamura, M.1
-
152
-
-
79959711557
-
A high-definition native polyacrylamide gel electrophoresis system for the analysis of membrane complexes
-
doi: 10.1111/j.1365-313X.2011.04577
-
Ladig R et al (2011) A high-definition native polyacrylamide gel electrophoresis system for the analysis of membrane complexes. Plant J 67(1):181-194. doi: 10.1111/j.1365-313X.2011.04577
-
(2011)
Plant J
, vol.67
, Issue.1
, pp. 181-194
-
-
Ladig, R.1
-
153
-
-
78951470413
-
A blue native-PAGE analysis of membrane protein complexes in Clostridium thermocellum
-
1:CAS:528:DC%2BC3MXhvVKlsrw%3D 3039559 21269440
-
Peng Y et al (2011) A blue native-PAGE analysis of membrane protein complexes in Clostridium thermocellum. BMC Microbiol 11(1):22
-
(2011)
BMC Microbiol
, vol.11
, Issue.1
, pp. 22
-
-
Peng, Y.1
-
154
-
-
69949092911
-
LC-MS/MS as an alternative for SDS-PAGE in blue native analysis of protein complexes
-
1:CAS:528:DC%2BD1MXhtV2jt7bL 19688755
-
Wessels HJ et al (2009) LC-MS/MS as an alternative for SDS-PAGE in blue native analysis of protein complexes. Proteomics 9(17):4221-4228
-
(2009)
Proteomics
, vol.9
, Issue.17
, pp. 4221-4228
-
-
Wessels, H.J.1
-
155
-
-
67649213037
-
Proteomic analysis on the temperature-dependent complexes in Thermoanaerobacter tengcongensis
-
1:CAS:528:DC%2BD1MXntlGgur4%3D 19526551
-
Meng B et al (2009) Proteomic analysis on the temperature-dependent complexes in Thermoanaerobacter tengcongensis. Proteomics 9(11):3189-3200
-
(2009)
Proteomics
, vol.9
, Issue.11
, pp. 3189-3200
-
-
Meng, B.1
-
156
-
-
34447319949
-
Identification of protein complexes in detergent-resistant membranes of Plasmodium falciparum schizonts
-
DOI 10.1016/j.molbiopara.2007.04.013, PII S016668510700134X
-
Sanders PR et al (2007) Identification of protein complexes in detergent-resistant membranes of Plasmodium falciparum schizonts. Mol Biochem Parasitol 154(2):148-157 (Pubitemid 47049660)
-
(2007)
Molecular and Biochemical Parasitology
, vol.154
, Issue.2
, pp. 148-157
-
-
Sanders, P.R.1
Cantin, G.T.2
Greenbaum, D.C.3
Gilson, P.R.4
Nebl, T.5
Moritz, R.L.6
Yates III, J.R.7
Hodder, A.N.8
Crabb, B.S.9
-
157
-
-
33847619880
-
Two-dimensional blue native/SDS gel electrophoresis of multiprotein complexes from Helicobacter pylori
-
DOI 10.1074/mcp.M600363-MCP200
-
Pyndiah S et al (2007) Two-dimensional blue native/SDS gel electrophoresis of multiprotein complexes from Helicobacter pylori. Mol Cell Proteomics 6(2):193-206 (Pubitemid 46359510)
-
(2007)
Molecular and Cellular Proteomics
, vol.6
, Issue.2
, pp. 193-206
-
-
Pyndiah, S.1
Lasserre, J.P.2
Menard, A.3
Claverol, S.4
Prouzet-Mauleon, V.5
Megraud, F.6
Zerbib, F.7
Bonneu, M.8
-
158
-
-
2642529334
-
Two-dimensional Blue native/SDS gel electrophoresis of multi-protein complexes from whole cellular lysates: A proteomics approach
-
1:CAS:528:DC%2BD2cXhs1WitbY%3D 14665681
-
Camacho-Carvajal MM et al (2004) Two-dimensional Blue native/SDS gel electrophoresis of multi-protein complexes from whole cellular lysates: a proteomics approach. Mol Cell Proteomics 3(2):176-182
-
(2004)
Mol Cell Proteomics
, vol.3
, Issue.2
, pp. 176-182
-
-
Camacho-Carvajal, M.M.1
-
159
-
-
0036024975
-
Blue Native electrophoresis to study mitochondrial and other protein complexes
-
DOI 10.1016/S1046-2023(02)00038-5, PII S1046202302000385
-
Nijtmans LG, Henderson NS, Holt IJ (2002) Blue Native electrophoresis to study mitochondrial and other protein complexes. Methods 26(4):327-334 (Pubitemid 34971572)
-
(2002)
Methods
, vol.26
, Issue.4
, pp. 327-334
-
-
Nijtmans, L.G.J.1
Henderson, N.S.2
Holt, I.J.3
-
160
-
-
33744906757
-
4-type plant Zea mays
-
DOI 10.1016/j.jplph.2005.11.014, PII S0176161705004633
-
Darie CC et al (2006) Studies of the Ndh complex and photosystem II from mesophyll and bundle sheath chloroplasts of the C4-type plant Zea mays. J Plant Physiol 163(8):800-808 (Pubitemid 43851111)
-
(2006)
Journal of Plant Physiology
, vol.163
, Issue.8
, pp. 800-808
-
-
Darie, C.C.1
De Pascalis, L.2
Mutschler, B.3
Haehnel, W.4
-
161
-
-
20444434349
-
Isolation and structural characterization of the Ndh complex from mesophyll and bundle sheath chloroplasts of Zea mays
-
DOI 10.1111/j.1742-4658.2005.04685.x
-
Darie CC et al (2005) Isolation and structural characterization of the Ndh complex from mesophyll and bundle sheath chloroplasts of Zea mays. FEBS J 272(11):2705-2716 (Pubitemid 40825418)
-
(2005)
FEBS Journal
, vol.272
, Issue.11
, pp. 2705-2716
-
-
Darie, C.C.1
Biniossek, M.L.2
Winter, V.3
Mutschler, B.4
Haehnel, W.5
-
162
-
-
3142653751
-
Subunit composition of NDH-1 complexes of Synechocystis sp. PCC 6803. Identification of two new ndh gene products with nuclear-encoded homologues in the chloroplast Ndh complex
-
DOI 10.1074/jbc.M401107200
-
Prommeenate P et al (2004) Subunit composition of NDH-1 complexes of Synechocystis sp. PCC 6803: identification of two new ndh gene products with nuclear-encoded homologues in the chloroplast Ndh complex. J Biol Chem 279(27):28165-28173 (Pubitemid 38900091)
-
(2004)
Journal of Biological Chemistry
, vol.279
, Issue.27
, pp. 28165-28173
-
-
Prommeenate, P.1
Lennon, A.M.2
Markert, C.3
Hippler, M.4
Nixon, P.J.5
-
163
-
-
85047681911
-
3 plants. In vivo control by the redox state of chloroplasts and involvement of the NADH-dehydrogenase complex
-
DOI 10.1104/pp.128.2.760
-
Joet T et al (2002) Cyclic electron flow around photosystem I in C(3) plants. In vivo control by the redox state of chloroplasts and involvement of the NADH-dehydrogenase complex. Plant Physiol 128(2):760-769 (Pubitemid 34190890)
-
(2002)
Plant Physiology
, vol.128
, Issue.2
, pp. 760-769
-
-
Joet, T.1
Cournac, L.2
Peltier, G.3
Havaux, M.4
-
164
-
-
0033978632
-
Chlororespiration and poising of cyclic electron transport. Plastoquinone as electron transporter between thylakoid NADH dehydrogenase and peroxidase
-
DOI 10.1074/jbc.275.2.942
-
Casano LM et al (2000) Chlororespiration and poising of cyclic electron transport. Plastoquinone as electron transporter between thylakoid NADH dehydrogenase and peroxidase. J Biol Chem 275(2):942-948 (Pubitemid 30051139)
-
(2000)
Journal of Biological Chemistry
, vol.275
, Issue.2
, pp. 942-948
-
-
Casano, L.M.1
Zapata, J.M.2
Martin, M.3
Sabater, B.4
-
165
-
-
0032486451
-
The chloroplast Ndh complex mediates the dark reduction of the plastoquinone pool in response to heat stress in tobacco leaves
-
DOI 10.1016/S0014-5793(98)00573-0, PII S0014579398005730
-
Sazanov LA, Burrows PA, Nixon PJ (1998) The chloroplast Ndh complex mediates the dark reduction of the plastoquinone pool in response to heat stress in tobacco leaves. FEBS Lett 429(1):115-118 (Pubitemid 28281256)
-
(1998)
FEBS Letters
, vol.429
, Issue.1
, pp. 115-118
-
-
Sazanov, L.A.1
Burrows, P.A.2
Nixon, P.J.3
-
166
-
-
0031440186
-
Expression of the plastid ndhF gene product in photosynthetic and non-photosynthetic tissues of developing Barley seedlings
-
Catala R, Sabater B, Guera A (1997) Expression of the plastid ndhF gene product in photosynthetic and non-photosynthetic tissues of developing barley seedlings. Plant Cell Physiol 38(12):1382-1388 (Pubitemid 28034921)
-
(1997)
Plant and Cell Physiology
, vol.38
, Issue.12
, pp. 1382-1388
-
-
Catala, R.1
Sabater, B.2
Guera, A.3
-
167
-
-
0032481317
-
Identification of a functional respiratory complex in chloroplasts through analysis of tobacco mutants containing disrupted plastid ndh genes
-
DOI 10.1093/emboj/17.4.868
-
Burrows PA et al (1998) Identification of a functional respiratory complex in chloroplasts through analysis of tobacco mutants containing disrupted plastid ndh genes. EMBO J 17(4):868-876 (Pubitemid 28077641)
-
(1998)
EMBO Journal
, vol.17
, Issue.4
, pp. 868-876
-
-
Burrows, P.A.1
Sazanov, L.A.2
Svab, Z.3
Maliga, P.4
Nixon, P.J.5
-
169
-
-
0030043480
-
Evidence for an association of ndh B, ndh J gene products and ferredoxin-NADP-reductase as components of a chloroplastic NAD(P)H dehydrogenase complex
-
DOI 10.1016/0014-5793(95)01473-X
-
Guedeney G et al (1996) Evidence for an association of ndh B, ndh J gene products and ferredoxin-NADP-reductase as components of a chloroplastic NAD(P)H dehydrogenase complex. FEBS Lett 378(3):277-280 (Pubitemid 26023466)
-
(1996)
FEBS Letters
, vol.378
, Issue.3
, pp. 277-280
-
-
Guedeney, G.1
Corneille, S.2
Cuine, S.3
Peltier, G.4
-
170
-
-
0032526228
-
Human Hrs, a tyrosine kinase substrate in growth factor-stimulated cells: CDNA cloning and mapping of the gene to chromosome 17
-
DOI 10.1016/S0378-1119(98)00184-X, PII S037811199800184X
-
Lu L, Komada M, Kitamura N (1998) Human Hrs, a tyrosine kinase substrate in growth factor-stimulated cells: cDNA cloning and mapping of the gene to chromosome 17. Gene 213(1-2):125-132 (Pubitemid 28284731)
-
(1998)
Gene
, vol.213
, Issue.1-2
, pp. 125-132
-
-
Lu, L.1
Komada, M.2
Kitamura, N.3
-
171
-
-
15444377238
-
Hrs, a mammalian master molecule in vesicular transport and protein sorting, suppresses the degradation of ESCRT proteins signal transducing adaptor molecule 1 and 2
-
DOI 10.1074/jbc.M409969200
-
Kobayashi H et al (2005) Hrs, a mammalian master molecule in vesicular transport and protein sorting, suppresses the degradation of ESCRT proteins signal transducing adaptor molecule 1 and 2. J Biol Chem 280(11):10468-10477 (Pubitemid 40395905)
-
(2005)
Journal of Biological Chemistry
, vol.280
, Issue.11
, pp. 10468-10477
-
-
Kobayashi, H.1
Tanaka, N.2
Asao, H.3
Miura, S.4
Kyuuma, M.5
Semura, K.6
Ishii, N.7
Sugamura, K.8
-
172
-
-
0141507032
-
Complete structure of p97/valosin-containing protein reveals communication between nucleotide domains
-
DOI 10.1038/nsb972
-
DeLaBarre B, Brunger AT (2003) Complete structure of p97/valosin- containing protein reveals communication between nucleotide domains. Nat Struct Biol 10(10):856-863 (Pubitemid 37187659)
-
(2003)
Nature Structural Biology
, vol.10
, Issue.10
, pp. 856-863
-
-
DeLaBarre, B.1
Brunger, A.T.2
-
174
-
-
0027707984
-
Biochemical purification of distinct proteasome subsets
-
1:CAS:528:DyaK2MXivVGgtbg%3D 7697132
-
Brown MG, Monaco JJ (1993) Biochemical purification of distinct proteasome subsets. Enzyme Protein 47(4-6):343-353
-
(1993)
Enzyme Protein
, vol.47
, Issue.4-6
, pp. 343-353
-
-
Brown, M.G.1
Monaco, J.J.2
-
175
-
-
0027705842
-
Subunit stoichiometry of human proteasomes
-
1:CAS:528:DyaK2MXivVGgtLg%3D 7697122
-
Hendil KB et al (1993) Subunit stoichiometry of human proteasomes. Enzyme Protein 47(4-6):232-240
-
(1993)
Enzyme Protein
, vol.47
, Issue.4-6
, pp. 232-240
-
-
Hendil, K.B.1
-
176
-
-
0027708385
-
Characterization of mouse proteasome subunit MC3 and identification of proteasome subtypes with different cleavage characteristics. Proteasome subunits, proteasome subpopulations
-
1:CAS:528:DyaK2MXivVGgtbs%3D 7697131
-
Seelig A, Boes B, Kloetzel PM (1993) Characterization of mouse proteasome subunit MC3 and identification of proteasome subtypes with different cleavage characteristics. Proteasome subunits, proteasome subpopulations. Enzyme Protein 47(4-6):330-342
-
(1993)
Enzyme Protein
, vol.47
, Issue.4-6
, pp. 330-342
-
-
Seelig, A.1
Boes, B.2
Kloetzel, P.M.3
-
177
-
-
0028894198
-
Human proteasomes analysed with monoclonal antibodies
-
1:CAS:528:DyaK2MXjtFeltbc%3D 7826336
-
Hendil KB, Kristensen P, Uerkvitz W (1995) Human proteasomes analysed with monoclonal antibodies. Biochem J 305(Pt 1):245-252
-
(1995)
Biochem J
, vol.305
, Issue.PT 1
, pp. 245-252
-
-
Hendil, K.B.1
Kristensen, P.2
Uerkvitz, W.3
-
178
-
-
0029891018
-
Purification and properties of the 26S proteasome from the rat brain: Evidence for its degradation of myelin basic protein in a ubiquitin-dependent manner
-
DOI 10.1016/0006-8993(96)00212-0
-
Akaishi T et al (1996) Purification and properties of the 26S proteasome from the rat brain: evidence for its degradation of myelin basic protein in a ubiquitin-dependent manner. Brain Res 722(1-2):139-144 (Pubitemid 26200724)
-
(1996)
Brain Research
, vol.722
, Issue.1-2
, pp. 139-144
-
-
Akaishi, T.1
Shiomi, T.2
Sawada, H.3
Yokosawa, H.4
-
181
-
-
33947380146
-
Mass spectrometric characterization of the affinity-purified human 26S proteasome complex
-
DOI 10.1021/bi061994u
-
Wang X et al (2007) Mass spectrometric characterization of the affinity-purified human 26S proteasome complex. Biochemistry 46(11):3553-3565 (Pubitemid 46449172)
-
(2007)
Biochemistry
, vol.46
, Issue.11
, pp. 3553-3565
-
-
Wang, X.1
Chen, C.-F.2
Baker, P.R.3
Chen, P.-L.4
Kaiser, P.5
Huang, L.6
-
182
-
-
22444444478
-
Mass spectrometric analysis of the human 40S ribosomal subunit: Native and HCV IRES-bound complexes
-
DOI 10.1110/ps.041293005
-
Yu Y et al (2005) Mass spectrometric analysis of the human 40S ribosomal subunit: native and HCV IRES-bound complexes. Protein Sci 14(6):1438-1446 (Pubitemid 41007909)
-
(2005)
Protein Science
, vol.14
, Issue.6
, pp. 1438-1446
-
-
Yu, Y.1
Ji, H.2
Doudna, J.A.3
Leary, J.A.4
-
183
-
-
34250378852
-
Structural characterization of the human eukaryotic initiation factor 3 protein complex by mass spectrometry
-
DOI 10.1074/mcp.M600399-MCP200
-
Damoc E et al (2007) Structural characterization of the human eukaryotic initiation factor 3 protein complex by mass spectrometry. Mol Cell Proteomics 6(7):1135-1146 (Pubitemid 47099225)
-
(2007)
Molecular and Cellular Proteomics
, vol.6
, Issue.7
, pp. 1135-1146
-
-
Damoc, E.1
Fraser, C.S.2
Zhou, M.3
Videler, H.4
Mayeur, G.L.5
Hershey, J.W.B.6
Doudna, J.A.7
Robinson, C.V.8
Leary, J.A.9
-
184
-
-
33746689825
-
Peptidomics and proteomics studies of transformed lymphocytes from patients mutated for the eukaryotic initiation factor 2B
-
DOI 10.1016/j.jchromb.2006.06.007, PII S1570023206004557
-
Fogli A et al (2006) Peptidomics and proteomics studies of transformed lymphocytes from patients mutated for the eukaryotic initiation factor 2B. J Chromatogr B Analyt Technol Biomed Life Sci 840(1):20-28 (Pubitemid 44164378)
-
(2006)
Journal of Chromatography B: Analytical Technologies in the Biomedical and Life Sciences
, vol.840
, Issue.1
, pp. 20-28
-
-
Fogli, A.1
Malinverni, C.2
Thadikkaran, L.3
Combes, P.4
Perret, F.5
Crettaz, D.6
Tissot, J.D.7
Boespflug-Tanguy, O.8
Stocklin, R.9
Bulet, P.10
-
185
-
-
0036269973
-
Proteomics of the eukaryotic transcription machinery: Identification of proteins associated with components of yeast TFIID by multidimensional mass spectrometry
-
DOI 10.1128/MCB.22.13.4723-4738.2002
-
Sanders SL et al (2002) Proteomics of the eukaryotic transcription machinery: identification of proteins associated with components of yeast TFIID by multidimensional mass spectrometry. Mol Cell Biol 22(13):4723-4738 (Pubitemid 34620408)
-
(2002)
Molecular and Cellular Biology
, vol.22
, Issue.13
, pp. 4723-4738
-
-
Sanders, S.L.1
Jennings, J.2
Canutescu, A.3
Link, A.J.4
Weil, P.A.5
-
186
-
-
57449083256
-
Mass spectrometry reveals modularity and a complete subunit interaction map of the eukaryotic translation factor eIF3
-
1:CAS:528:DC%2BD1cXhsVOmsb7E 18599441
-
Zhou M et al (2008) Mass spectrometry reveals modularity and a complete subunit interaction map of the eukaryotic translation factor eIF3. Proc Natl Acad Sci USA 105(47):18139-18144
-
(2008)
Proc Natl Acad Sci USA
, vol.105
, Issue.47
, pp. 18139-18144
-
-
Zhou, M.1
-
187
-
-
38549147576
-
Purified trout egg vitelline envelope proteins VEbeta and VEgamma polymerize into homomeric fibrils from dimers in vitro
-
1:CAS:528:DC%2BD1cXhtV2iurw%3D 18067874
-
Darie CC et al (2008) Purified trout egg vitelline envelope proteins VEbeta and VEgamma polymerize into homomeric fibrils from dimers in vitro. Biochim Biophys Acta 1784(2):385-392
-
(2008)
Biochim Biophys Acta
, vol.1784
, Issue.2
, pp. 385-392
-
-
Darie, C.C.1
-
188
-
-
0033574964
-
1 by blue native electrophoresis
-
DOI 10.1006/bbrc.1999.0820
-
Neff D, Dencher NA (1999) Purification of multisubunit membrane protein complexes: isolation of chloroplast FoF1-ATP synthase, CF0 and CF1 by blue native electrophoresis. Biochem Biophys Res Commun 259(3):569-575 (Pubitemid 29335574)
-
(1999)
Biochemical and Biophysical Research Communications
, vol.259
, Issue.3
, pp. 569-575
-
-
Neff, D.1
Dencher, N.A.2
-
189
-
-
77950639519
-
Organization of the Sec61 translocon, studied by high resolution native electrophoresis
-
1:CAS:528:DC%2BC3cXisVajs70%3D 20112977
-
Dejgaard K et al (2010) Organization of the Sec61 translocon, studied by high resolution native electrophoresis. J Proteome Res 9(4):1763-1771
-
(2010)
J Proteome Res
, vol.9
, Issue.4
, pp. 1763-1771
-
-
Dejgaard, K.1
-
190
-
-
28444497467
-
Advantages and limitations of clear-native PAGE
-
DOI 10.1002/pmic.200500081
-
Wittig I, Schagger H (2005) Advantages and limitations of clear-native PAGE. Proteomics 5(17):4338-4346 (Pubitemid 41739912)
-
(2005)
Proteomics
, vol.5
, Issue.17
, pp. 4338-4346
-
-
Wittig, I.1
Schagger, H.2
-
192
-
-
0347362791
-
Cardiolipin stabilizes respiratory chain supercomplexes
-
DOI 10.1074/jbc.M308366200
-
Pfeiffer K et al (2003) Cardiolipin stabilizes respiratory chain supercomplexes. J Biol Chem 278(52):52873-52880 (Pubitemid 38035887)
-
(2003)
Journal of Biological Chemistry
, vol.278
, Issue.52
, pp. 52873-52880
-
-
Pfeiffer, K.1
Gohil, V.2
Stuart, R.A.3
Hunte, C.4
Brandt, U.5
Greenberg, M.L.6
Schagger, H.7
-
193
-
-
0030589133
-
Separation by blue native and colorless native polyacrylamide gel electrophoresis of the oxidative phosphorylation complexes of yeast mitochondria solubilized by different detergents: Specific staining of the different complexes
-
DOI 10.1006/abio.1996.0460
-
Grandier-Vazeille X, Guerin M (1996) Separation by blue native and colorless native polyacrylamide gel electrophoresis of the oxidative phosphorylation complexes of yeast mitochondria solubilized by different detergents: specific staining of the different complexes. Anal Biochem 242(2):248-254 (Pubitemid 26386821)
-
(1996)
Analytical Biochemistry
, vol.242
, Issue.2
, pp. 248-254
-
-
Grandier-Vazeille, X.1
Guerin, M.2
-
194
-
-
0037435030
-
Mass spectrometry-based proteomics
-
DOI 10.1038/nature01511
-
Aebersold R, Mann M (2003) Mass spectrometry-based proteomics. Nature 422(6928):198-207 (Pubitemid 36362757)
-
(2003)
Nature
, vol.422
, Issue.6928
, pp. 198-207
-
-
Aebersold, R.1
Mann, M.2
-
195
-
-
33645813378
-
Mass spectrometry and protein analysis
-
1:CAS:528:DC%2BD28XjtlOjs7w%3D 16614208
-
Domon B, Aebersold R (2006) Mass spectrometry and protein analysis. Science 312(5771):212-217
-
(2006)
Science
, vol.312
, Issue.5771
, pp. 212-217
-
-
Domon, B.1
Aebersold, R.2
-
196
-
-
84892809438
-
Mass spectrometry as a tool for studying autism spectrum disorder
-
in press
-
Woods AG et al (2012) Mass spectrometry as a tool for studying autism spectrum disorder. J Mol Psychiatry (in press)
-
(2012)
J Mol Psychiatry
-
-
Woods, A.G.1
-
197
-
-
84857995363
-
Identification of consistent alkylation of cysteine-less peptides in a proteomics experiment
-
1:CAS:528:DC%2BC38XjtVOgtbk%3D 22342715
-
Woods AG, Sokolowska I, Darie CC (2012) Identification of consistent alkylation of cysteine-less peptides in a proteomics experiment. Biochem Biophys Res Commun 419(2):305-308
-
(2012)
Biochem Biophys Res Commun
, vol.419
, Issue.2
, pp. 305-308
-
-
Woods, A.G.1
Sokolowska, I.2
Darie, C.C.3
-
198
-
-
84864440753
-
Proteomic analysis of plasma membranes isolated from undifferentiated and differentiated HepaRG cells
-
1:CAS:528:DC%2BC3sXhvFChtrs%3D 3527237 22857383
-
Sokolowska I et al (2012) Proteomic analysis of plasma membranes isolated from undifferentiated and differentiated HepaRG cells. Proteome Sci 10(1):47
-
(2012)
Proteome Sci
, vol.10
, Issue.1
, pp. 47
-
-
Sokolowska, I.1
-
199
-
-
84861564538
-
Potential biomarkers in psychiatry: Focus on the cholesterol system
-
1:CAS:528:DC%2BC38Xht1SjsbzP 22304330
-
Woods AG et al (2012) Potential biomarkers in psychiatry: focus on the cholesterol system. J Cell Mol Med 16(6):1184-1195
-
(2012)
J Cell Mol Med
, vol.16
, Issue.6
, pp. 1184-1195
-
-
Woods, A.G.1
-
200
-
-
79960396255
-
Liquid chromatography-mass spectrometry-based quantitative proteomics
-
1:CAS:528:DC%2BC3MXovFCksbc%3D 21632532
-
Xie F et al (2011) Liquid chromatography-mass spectrometry-based quantitative proteomics. J Biol Chem 286(29):25443-25449
-
(2011)
J Biol Chem
, vol.286
, Issue.29
, pp. 25443-25449
-
-
Xie, F.1
-
201
-
-
0029739994
-
Sequence tag identification of intact proteins by matching tandem mass spectral data against sequence data bases
-
DOI 10.1073/pnas.93.16.8264
-
Mortz E et al (1996) Sequence tag identification of intact proteins by matching tandem mass spectral data against sequence data bases. Proc Natl Acad Sci USA 93(16):8264-8267 (Pubitemid 26269545)
-
(1996)
Proceedings of the National Academy of Sciences of the United States of America
, vol.93
, Issue.16
, pp. 8264-8267
-
-
Mortz, E.1
O'Connor, P.B.2
Roepstorff, P.3
Kelleher, N.L.4
Wood, T.D.5
McLafferty, F.W.6
Mann, M.7
-
202
-
-
0030048495
-
Mass spectrometric characterization of glycosylated interferon-gamma variants separated by gel electrophoresis
-
1:STN:280:DyaK28znslWksg%3D%3D 8783018
-
Mortz E et al (1996) Mass spectrometric characterization of glycosylated interferon-gamma variants separated by gel electrophoresis. Electrophoresis 17(5):925-931
-
(1996)
Electrophoresis
, vol.17
, Issue.5
, pp. 925-931
-
-
Mortz, E.1
-
203
-
-
0029824086
-
Does matrix-assisted laser desorption/ionization mass spectrometry allow analysis of carbohydrate heterogeneity in glycoproteins? A study of natural human interferon
-
DOI 10.1002/(SICI)1096-9888(199610)31:10<1109::AID-JMS400>3.0.CO;2- 9
-
Mortz E et al (1996) Does matrix-assisted laser desorption/ionization mass spectrometry allow analysis of carbohydrate heterogeneity in glycoproteins? A study of natural human interferon-gamma. J Mass Spectrom 31(10):1109-1118 (Pubitemid 26360245)
-
(1996)
Journal of Mass Spectrometry
, vol.31
, Issue.10
, pp. 1109-1118
-
-
Mortz, E.1
Sareneva, T.2
Julkunen, I.3
Roepstorff, P.4
-
204
-
-
0035433686
-
Toward efficient analysis of >70 kDa proteins with 100% sequence coverage
-
DOI 10.1002/1615-9861(200108)1:8<927::AID-PROT927>3.0.CO;2-T
-
Forbes AJ et al (2001) Toward efficient analysis of >70 kDa proteins with 100% sequence coverage. Proteomics 1(8):927-933 (Pubitemid 33699609)
-
(2001)
Proteomics
, vol.1
, Issue.8
, pp. 927-933
-
-
Forbes, A.J.1
Mazur, M.T.2
Patel, H.M.3
Walsh, C.T.4
Kelleher, N.L.5
-
205
-
-
0037196338
-
Top down characterization of larger proteins (45 kDa) by electron capture dissociation mass spectrometry
-
DOI 10.1021/ja011335z
-
Ge Y et al (2002) Top down characterization of larger proteins (45 kDa) by electron capture dissociation mass spectrometry. J Am Chem Soc 124(4):672-678 (Pubitemid 34101174)
-
(2002)
Journal of the American Chemical Society
, vol.124
, Issue.4
, pp. 672-678
-
-
Ge, Y.1
Lawhorn, B.G.2
ElNaggar, M.3
Strauss, E.4
Park, J.-H.5
Begley, T.P.6
McLafferty, F.W.7
-
206
-
-
0036253914
-
An accurate mass tag strategy for quantitative and high-throughput proteome measurements
-
DOI 10.1002/1615-9861(200205)2:5<513::AID-PROT513>3.0.CO;2-W
-
Smith RD et al (2002) An accurate mass tag strategy for quantitative and high-throughput proteome measurements. Proteomics 2(5):513-523 (Pubitemid 34507341)
-
(2002)
Proteomics
, vol.2
, Issue.5
, pp. 513-523
-
-
Smith, R.D.1
Anderson, G.A.2
Lipton, M.S.3
Pasa-Tolic, L.4
Shen, Y.5
Conrads, T.P.6
Veenstra, T.D.7
Udseth, H.R.8
-
207
-
-
0033051101
-
Direct analysis of protein complexes using mass spectrometry
-
DOI 10.1038/10890
-
Link AJ et al (1999) Direct analysis of protein complexes using mass spectrometry. Nat Biotechnol 17(7):676-682 (Pubitemid 29316146)
-
(1999)
Nature Biotechnology
, vol.17
, Issue.7
, pp. 676-682
-
-
Link, A.J.1
Eng, J.2
Schieltz, D.M.3
Carmack, E.4
Mize, G.J.5
Morris, D.R.6
Garvik, B.M.7
Yates III, J.R.8
-
209
-
-
84860867742
-
The proteomic future: Where mass spectrometry should be taking us
-
1:CAS:528:DC%2BC38XmvVKjs70%3D 22574775
-
Thelen JJ, Miernyk JA (2012) The proteomic future: where mass spectrometry should be taking us. Biochem J 444(2):169-181
-
(2012)
Biochem J
, vol.444
, Issue.2
, pp. 169-181
-
-
Thelen, J.J.1
Miernyk, J.A.2
-
210
-
-
33646557331
-
Protein cleavage strategies for an improved analysis of the membrane proteome
-
1458320 16512920
-
Fischer F, Poetsch A (2006) Protein cleavage strategies for an improved analysis of the membrane proteome. Proteome Sci 4:2
-
(2006)
Proteome Sci
, vol.4
, pp. 2
-
-
Fischer, F.1
Poetsch, A.2
-
211
-
-
77949786295
-
Value of using multiple proteases for large-scale mass spectrometry-based proteomics
-
1:CAS:528:DC%2BC3cXht12hs7o%3D 2833215 20113005
-
Swaney DL, Wenger CD, Coon JJ (2010) Value of using multiple proteases for large-scale mass spectrometry-based proteomics. J Proteome Res 9(3):1323-1329
-
(2010)
J Proteome Res
, vol.9
, Issue.3
, pp. 1323-1329
-
-
Swaney, D.L.1
Wenger, C.D.2
Coon, J.J.3
-
213
-
-
0001413545
-
Detection of noncovalent receptor-ligand complexes by mass spectrometry
-
1:CAS:528:DyaK3MXkvVGgtLk%3D
-
Ganem J, Li YT, Henion J (1991) Detection of noncovalent receptor-ligand complexes by mass spectrometry. J Am Chem Soc 113:6294-6296
-
(1991)
J Am Chem Soc
, vol.113
, pp. 6294-6296
-
-
Ganem, J.1
Li, Y.T.2
Henion, J.3
-
214
-
-
79958076708
-
The catalytic activity of Ubp6 enhances maturation of the proteasomal regulatory particle
-
1:CAS:528:DC%2BC3MXnsV2jtbY%3D 21658604
-
Sakata E et al (2011) The catalytic activity of Ubp6 enhances maturation of the proteasomal regulatory particle. Mol Cell 42(5):637-649
-
(2011)
Mol Cell
, vol.42
, Issue.5
, pp. 637-649
-
-
Sakata, E.1
-
215
-
-
35148816658
-
Structural biology of RNA polymerase III: Mass spectrometry elucidates subcomplex architecture
-
DOI 10.1016/j.str.2007.07.016, PII S0969212607002912
-
Lorenzen K et al (2007) Structural biology of RNA polymerase III: mass spectrometry elucidates subcomplex architecture. Structure 15(10):1237-1245 (Pubitemid 47539158)
-
(2007)
Structure
, vol.15
, Issue.10
, pp. 1237-1245
-
-
Lorenzen, K.1
Vannini, A.2
Cramer, P.3
Heck, A.J.R.4
-
216
-
-
48249109172
-
High-resolution mass spectrometry of viral assemblies: Molecular composition and stability of dimorphic hepatitis B virus capsids
-
1:CAS:528:DC%2BD1cXosFakt70%3D 18587050
-
Uetrecht C et al (2008) High-resolution mass spectrometry of viral assemblies: molecular composition and stability of dimorphic hepatitis B virus capsids. Proc Natl Acad Sci USA 105(27):9216-9220
-
(2008)
Proc Natl Acad Sci USA
, vol.105
, Issue.27
, pp. 9216-9220
-
-
Uetrecht, C.1
-
217
-
-
47249106965
-
Micelles protect membrane complexes from solution to vacuum
-
DOI 10.1126/science.1159292
-
Barrera NP et al (2008) Micelles protect membrane complexes from solution to vacuum. Science 321(5886):243-246 (Pubitemid 351989094)
-
(2008)
Science
, vol.321
, Issue.5886
, pp. 243-246
-
-
Barrera, N.P.1
Di Bartolo, N.2
Booth, P.J.3
Robinson, C.V.4
-
218
-
-
68349086900
-
Mass spectrometry of membrane transporters reveals subunit stoichiometry and interactions
-
1:CAS:528:DC%2BD1MXotVCltrk%3D 19578383
-
Barrera NP et al (2009) Mass spectrometry of membrane transporters reveals subunit stoichiometry and interactions. Nat Methods 6(8):585-587
-
(2009)
Nat Methods
, vol.6
, Issue.8
, pp. 585-587
-
-
Barrera, N.P.1
-
219
-
-
77951582169
-
Ion mobility mass spectrometry of proteins and protein assemblies
-
1:CAS:528:DC%2BC3cXltFKgtrg%3D 20419213
-
Uetrecht C et al (2010) Ion mobility mass spectrometry of proteins and protein assemblies. Chem Soc Rev 39(5):1633-1655
-
(2010)
Chem Soc Rev
, vol.39
, Issue.5
, pp. 1633-1655
-
-
Uetrecht, C.1
-
220
-
-
79952980494
-
Protein-nucleic acid complexes and the role of mass spectrometry in their structure determination
-
1:CAS:528:DC%2BC3MXjsFyqt7k%3D 21417597
-
Park AY, Robinson CV (2011) Protein-nucleic acid complexes and the role of mass spectrometry in their structure determination. Crit Rev Biochem Mol Biol 46(2):152-164
-
(2011)
Crit Rev Biochem Mol Biol
, vol.46
, Issue.2
, pp. 152-164
-
-
Park, A.Y.1
Robinson, C.V.2
-
221
-
-
34250710634
-
Sizing large proteins and protein complexes by electrospray ionization mass spectrometry and ion mobility
-
DOI 10.1016/j.jasms.2007.02.015, PII S104403050700178X
-
Kaddis CS et al (2007) Sizing large proteins and protein complexes by electrospray ionization mass spectrometry and ion mobility. J Am Soc Mass Spectrom 18(7):1206-1216 (Pubitemid 46963586)
-
(2007)
Journal of the American Society for Mass Spectrometry
, vol.18
, Issue.7
, pp. 1206-1216
-
-
Kaddis, C.S.1
Lomeli, S.H.2
Yin, S.3
Berhane, B.4
Apostol, M.I.5
Kickhoefer, V.A.6
Rome, L.H.7
Loo, J.A.8
-
222
-
-
30744464873
-
Insulin-dependent interactions of proteins with GLUT4 revealed through stable isotope labeling by amino acids in cell culture (SILAC)
-
DOI 10.1021/pr0502626
-
Foster LJ et al (2006) Insulin-dependent interactions of proteins with GLUT4 revealed through stable isotope labeling by amino acids in cell culture (SILAC). J Proteome Res 5(1):64-75 (Pubitemid 43100798)
-
(2006)
Journal of Proteome Research
, vol.5
, Issue.1
, pp. 64-75
-
-
Foster, L.J.1
Rudich, A.2
Talior, I.3
Patel, N.4
Huang, X.5
Furtado, L.M.6
Bilan, P.J.7
Mann, M.8
Klip, A.9
-
223
-
-
40849108777
-
Mapping the integrin-linked kinase interactome using SILAC
-
1:CAS:528:DC%2BD1cXjtVaiu78%3D 18327965
-
Dobreva I et al (2008) Mapping the integrin-linked kinase interactome using SILAC. J Proteome Res 7(4):1740-1749
-
(2008)
J Proteome Res
, vol.7
, Issue.4
, pp. 1740-1749
-
-
Dobreva, I.1
-
224
-
-
33644524404
-
Repo-Man recruits PP1 gamma to chromatin and is essential for cell viability
-
1:CAS:528:DC%2BD28XitFCjtbk%3D 16492807
-
Trinkle-Mulcahy L et al (2006) Repo-Man recruits PP1 gamma to chromatin and is essential for cell viability. J Cell Biol 172(5):679-692
-
(2006)
J Cell Biol
, vol.172
, Issue.5
, pp. 679-692
-
-
Trinkle-Mulcahy, L.1
-
226
-
-
33751230224
-
Protein interaction screening by quantitative immunoprecipitation combined with knockdown (QUICK)
-
DOI 10.1038/nmeth972, PII NMETH972
-
Selbach M, Mann M (2006) Protein interaction screening by quantitative immunoprecipitation combined with knockdown (QUICK). Nat Methods 3(12):981-983 (Pubitemid 44782696)
-
(2006)
Nature Methods
, vol.3
, Issue.12
, pp. 981-983
-
-
Selbach, M.1
Mann, M.2
-
227
-
-
39749146978
-
Quantitative proteomic analysis of protein complexes: Concurrent identifaction of interactors and their state of phosphorylation
-
DOI 10.1074/mcp.M700282-MCP200
-
Pflieger D et al (2008) Quantitative proteomic analysis of protein complexes: concurrent identification of interactors and their state of phosphorylation. Mol Cell Proteomics 7(2):326-346 (Pubitemid 351298447)
-
(2008)
Molecular and Cellular Proteomics
, vol.7
, Issue.2
, pp. 326-346
-
-
Pflieger, D.1
Junger, M.A.2
Muller, M.3
Rinner, O.4
Lee, H.5
Gehrig, P.M.6
Gstaiger, M.7
Aebersold, R.8
-
228
-
-
10744223084
-
Dynamic changes in transcription factor complexes during erythroid differentiation revealed by quantitative proteomics
-
DOI 10.1038/nsmb713
-
Brand M et al (2004) Dynamic changes in transcription factor complexes during erythroid differentiation revealed by quantitative proteomics. Nat Struct Mol Biol 11(1):73-80 (Pubitemid 38173444)
-
(2004)
Nature Structural and Molecular Biology
, vol.11
, Issue.1
, pp. 73-80
-
-
Brand, M.1
Ranish, J.A.2
Kummer, N.T.3
Hamilton, J.4
Igarashi, K.5
Francastel, C.6
Chi, T.H.7
Crabtree, G.R.8
Aebersold, R.9
Groudine, M.10
-
229
-
-
84859256741
-
To label or not to label: Applications of quantitative proteomics in neuroscience research
-
1:CAS:528:DC%2BC38XhtFSmtr0%3D 22247077
-
Filiou MD et al (2012) To label or not to label: applications of quantitative proteomics in neuroscience research. Proteomics 12(4-5):736-747
-
(2012)
Proteomics
, vol.12
, Issue.4-5
, pp. 736-747
-
-
Filiou, M.D.1
-
230
-
-
33845329203
-
Functional and quantitative proteomics using SILAC
-
DOI 10.1038/nrm2067, PII NRM2067
-
Mann M (2006) Functional and quantitative proteomics using SILAC. Nat Rev Mol Cell Biol 7(12):952-958 (Pubitemid 44871421)
-
(2006)
Nature Reviews Molecular Cell Biology
, vol.7
, Issue.12
, pp. 952-958
-
-
Mann, M.1
-
232
-
-
19944432197
-
Multiplexed protein quantitation in Saccharomyces cerevisiae using amine-reactive isobaric tagging reagents
-
1:CAS:528:DC%2BD2MXhvFartg%3D%3D 15385600
-
Ross PL et al (2004) Multiplexed protein quantitation in Saccharomyces cerevisiae using amine-reactive isobaric tagging reagents. Mol Cell Proteomics 3(12):1154-1169
-
(2004)
Mol Cell Proteomics
, vol.3
, Issue.12
, pp. 1154-1169
-
-
Ross, P.L.1
-
233
-
-
0036583926
-
Stable isotope labeling by amino acids in cell culture, SILAC, as a simple and accurate approach to expression proteomics
-
1:CAS:528:DC%2BD38XlslWhsrk%3D 12118079
-
Ong SE et al (2002) Stable isotope labeling by amino acids in cell culture, SILAC, as a simple and accurate approach to expression proteomics. Mol Cell Proteomics 1(5):376-386
-
(2002)
Mol Cell Proteomics
, vol.1
, Issue.5
, pp. 376-386
-
-
Ong, S.E.1
-
234
-
-
67349225422
-
New dimensions in the study of protein complexes using quantitative mass spectrometry
-
1:CAS:528:DC%2BD1MXmsVCmsr0%3D 19376113
-
Oeljeklaus S, Meyer HE, Warscheid B (2009) New dimensions in the study of protein complexes using quantitative mass spectrometry. FEBS Lett 583(11):1674-1683
-
(2009)
FEBS Lett
, vol.583
, Issue.11
, pp. 1674-1683
-
-
Oeljeklaus, S.1
Meyer, H.E.2
Warscheid, B.3
-
235
-
-
0037370399
-
The study of macromolecular complexes by quantitative proteomics
-
DOI 10.1038/ng1101
-
Ranish JA et al (2003) The study of macromolecular complexes by quantitative proteomics. Nat Genet 33(3):349-355 (Pubitemid 36278851)
-
(2003)
Nature Genetics
, vol.33
, Issue.3
, pp. 349-355
-
-
Ranish, J.A.1
Yi, E.C.2
Leslie, D.M.3
Purvine, S.O.4
Goodlett, D.R.5
Eng, J.6
Aebersold, R.7
-
236
-
-
33947182552
-
An integrated mass spectrometric and computational framework for the analysis of protein interaction networks
-
DOI 10.1038/nbt1289, PII NBT1289
-
Rinner O et al (2007) An integrated mass spectrometric and computational framework for the analysis of protein interaction networks. Nat Biotechnol 25(3):345-352 (Pubitemid 46398770)
-
(2007)
Nature Biotechnology
, vol.25
, Issue.3
, pp. 345-352
-
-
Rinner, O.1
Mueller, L.N.2
Hubalek, M.3
Muller, M.4
Gstaiger, M.5
Aebersold, R.6
-
238
-
-
84856158133
-
StavroX-A software for analyzing crosslinked products in protein interaction studies
-
22038510
-
Gotze M et al (2012) StavroX-a software for analyzing crosslinked products in protein interaction studies. J Am Soc Mass Spectrom 23(1):76-87
-
(2012)
J Am Soc Mass Spectrom
, vol.23
, Issue.1
, pp. 76-87
-
-
Gotze, M.1
-
239
-
-
77953553592
-
Laser desorption-ionization of lipid transfers: Tissue mass spectrometry imaging without MALDI matrix
-
1:CAS:528:DC%2BC3cXmsVCqu7k%3D 20491444
-
Vidova V et al (2010) Laser desorption-ionization of lipid transfers: tissue mass spectrometry imaging without MALDI matrix. Anal Chem 82(12):4994-4997
-
(2010)
Anal Chem
, vol.82
, Issue.12
, pp. 4994-4997
-
-
Vidova, V.1
-
240
-
-
80052564640
-
Studying protein-protein affinity and immobilized ligand-protein affinity interactions using MS-based methods
-
1:CAS:528:DC%2BC3MXovVOhu74%3D 3151372 21755271
-
Kool J et al (2011) Studying protein-protein affinity and immobilized ligand-protein affinity interactions using MS-based methods. Anal Bioanal Chem 401(4):1109-1125
-
(2011)
Anal Bioanal Chem
, vol.401
, Issue.4
, pp. 1109-1125
-
-
Kool, J.1
-
241
-
-
84861640022
-
OTX2 directly activates cell cycle genes and inhibits differentiation in medulloblastoma cells
-
1:CAS:528:DC%2BC3MXhsVagtLjI 21964830
-
Bunt J et al (2012) OTX2 directly activates cell cycle genes and inhibits differentiation in medulloblastoma cells. Int J Cancer 131(2):E21-E32
-
(2012)
Int J Cancer
, vol.131
, Issue.2
-
-
Bunt, J.1
-
243
-
-
33750696329
-
Improving the performance of a quadrupole time-of-flight instrument for macromolecular mass spectrometry
-
DOI 10.1021/ac061039a
-
van den Heuvel RH et al (2006) Improving the performance of a quadrupole time-of-flight instrument for macromolecular mass spectrometry. Anal Chem 78(21):7473-7483 (Pubitemid 44707654)
-
(2006)
Analytical Chemistry
, vol.78
, Issue.21
, pp. 7473-7483
-
-
Van Den Heuvel, R.H.H.1
Van Duijn, E.2
Mazon, H.3
Synowsky, S.A.4
Lorenzen, K.5
Versluis, C.6
Brouns, S.J.J.7
Langridge, D.8
Van Der Oost, J.9
Hoyes, J.10
Heck, A.J.R.11
-
244
-
-
4544232304
-
Electrospray ionization of a whole virus: Analyzing mass, structure, and viability
-
DOI 10.1002/cbic.200300754
-
Bothner B, Siuzdak G (2004) Electrospray ionization of a whole virus: analyzing mass, structure, and viability. ChemBioChem 5(3):258-260 (Pubitemid 39257116)
-
(2004)
ChemBioChem
, vol.5
, Issue.3
, pp. 258-260
-
-
Bothner, B.1
Siuzdak, G.2
-
245
-
-
79251613176
-
Interrogating viral capsid assembly with ion mobility-mass spectrometry
-
1:CAS:528:DC%2BC3MXovVGgtA%3D%3D 21258385
-
Uetrecht C et al (2011) Interrogating viral capsid assembly with ion mobility-mass spectrometry. Nat Chem 3(2):126-132
-
(2011)
Nat Chem
, vol.3
, Issue.2
, pp. 126-132
-
-
Uetrecht, C.1
-
246
-
-
77956898604
-
Determining the topology of virus assembly intermediates using ion mobility spectrometry-mass spectrometry
-
1:CAS:528:DC%2BC3cXht1Gqtr3P 20872636
-
Knapman TW et al (2010) Determining the topology of virus assembly intermediates using ion mobility spectrometry-mass spectrometry. Rapid Commun Mass Spectrom 24(20):3033-3042
-
(2010)
Rapid Commun Mass Spectrom
, vol.24
, Issue.20
, pp. 3033-3042
-
-
Knapman, T.W.1
-
247
-
-
78649844980
-
Proteomics technologies for the global identification and quantification of proteins
-
1:CAS:528:DC%2BC3MXotlyhtw%3D%3D 21109216
-
Brewis IA, Brennan P (2010) Proteomics technologies for the global identification and quantification of proteins. Adv Protein Chem Struct Biol 80:1-44
-
(2010)
Adv Protein Chem Struct Biol
, vol.80
, pp. 1-44
-
-
Brewis, I.A.1
Brennan, P.2
-
248
-
-
0026008653
-
Structural analyses of proteins electroblotted from native polyacrylamide gels onto polyvinyldiene difluoride membranes. A method for determining the stoichiometry of protein-protein interaction in solution
-
1:CAS:528:DyaK3MXmslGhsr4%3D 1799212
-
Wang F, Pan YC (1991) Structural analyses of proteins electroblotted from native polyacrylamide gels onto polyvinyldiene difluoride membranes. A method for determining the stoichiometry of protein-protein interaction in solution. Anal Biochem 198(2):285-291
-
(1991)
Anal Biochem
, vol.198
, Issue.2
, pp. 285-291
-
-
Wang, F.1
Pan, Y.C.2
-
249
-
-
0027497158
-
Electroblotting proteolytic products from native gel for direct N-terminal sequence analysis: An approach for studying protein-protein interaction
-
Wang F et al (1993) Electroblotting proteolytic products from native gel for direct N-terminal sequence analysis: an approach for studying protein-protein interaction. Electrophoresis 14(9):847-851 (Pubitemid 23287256)
-
(1993)
Electrophoresis
, vol.14
, Issue.9
, pp. 847-851
-
-
Wang, F.1
Su, C.2
Hollfelder, K.3
Waddington, D.4
Pan, Y.-C.E.5
-
250
-
-
0029094281
-
Capillary electrophoresis of proteins and nucleic acids
-
1:CAS:528:DyaK2MXmt1amsbo%3D 7663128
-
Karger BL, Chu YH, Foret F (1995) Capillary electrophoresis of proteins and nucleic acids. Annu Rev Biophys Biomol Struct 24:579-610
-
(1995)
Annu Rev Biophys Biomol Struct
, vol.24
, pp. 579-610
-
-
Karger, B.L.1
Chu, Y.H.2
Foret, F.3
-
251
-
-
0032725692
-
Electrophoretic methods for studying protein-protein interactions
-
DOI 10.1006/meth.1999.0856
-
Vergnon AL, Chu YH (1999) Electrophoretic methods for studying protein-protein interactions. Methods 19(2):270-277 (Pubitemid 29515860)
-
(1999)
Methods: A Companion to Methods in Enzymology
, vol.19
, Issue.2
, pp. 270-277
-
-
Vergnon, A.L.1
Chu, Y.-H.2
-
253
-
-
77955735445
-
Emerging analytical separation techniques with high throughput potential for pharmaceutical analysis, part I: Stationary phase and instrumental developments in LC
-
1:CAS:528:DC%2BC3cXpt1yntbo%3D 20426750
-
Pieters S, Dejaegher B, Vander Heyden Y (2010) Emerging analytical separation techniques with high throughput potential for pharmaceutical analysis, part I: Stationary phase and instrumental developments in LC. Comb Chem High Throughput Screen 13(6):510-529
-
(2010)
Comb Chem High Throughput Screen
, vol.13
, Issue.6
, pp. 510-529
-
-
Pieters, S.1
Dejaegher, B.2
Vander Heyden, Y.3
-
254
-
-
79955801547
-
The future of biological mass spectrometry
-
1:CAS:528:DC%2BC3MXnt1Ohsrg%3D 21953036
-
Vestal ML (2011) The future of biological mass spectrometry. J Am Soc Mass Spectrom 22(6):953-959
-
(2011)
J Am Soc Mass Spectrom
, vol.22
, Issue.6
, pp. 953-959
-
-
Vestal, M.L.1
-
255
-
-
11144320641
-
Open source system for analyzing, validating, and storing protein identification data
-
DOI 10.1021/pr049882h
-
Craig R, Cortens JP, Beavis RC (2004) Open source system for analyzing, validating, and storing protein identification data. J Proteome Res 3(6):1234-1242 (Pubitemid 40040378)
-
(2004)
Journal of Proteome Research
, vol.3
, Issue.6
, pp. 1234-1242
-
-
Craig, R.1
Cortens, J.P.2
Beavis, R.C.3
-
256
-
-
43049127826
-
PeptideAtlas: A resource for target selection for emerging targeted proteomics workflows
-
DOI 10.1038/embor.2008.56, PII EMBOR200856
-
Deutsch EW, Lam H, Aebersold R (2008) PeptideAtlas: a resource for target selection for emerging targeted proteomics workflows. EMBO Rep 9(5):429-434 (Pubitemid 351627279)
-
(2008)
EMBO Reports
, vol.9
, Issue.5
, pp. 429-434
-
-
Deutsch, E.W.1
Lam, H.2
Aebersold, R.3
-
257
-
-
23944526367
-
PRIDE: The proteomics identifications database
-
DOI 10.1002/pmic.200401303
-
Martens L et al (2005) PRIDE: the proteomics identifications database. Proteomics 5(13):3537-3545 (Pubitemid 41192059)
-
(2005)
Proteomics
, vol.5
, Issue.13
, pp. 3537-3545
-
-
Martens, L.1
Hermjakob, H.2
Jones, P.3
Adamsk, M.4
Taylor, C.5
States, D.6
Gevaert, K.7
Vandekerckhove, J.8
Apweiler, R.9
-
258
-
-
75549090505
-
The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of pathway/genome databases
-
1:CAS:528:DC%2BC3cXktlymsw%3D%3D 2808959 19850718 Database issue
-
Caspi R et al (2010) The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of pathway/genome databases. Nucleic Acids Res 38:D473-D479 Database issue
-
(2010)
Nucleic Acids Res
, vol.38
-
-
Caspi, R.1
-
259
-
-
84879367043
-
PPInterFinder-A mining tool for extracting causal relations on human proteins from literature
-
Raja K, Subramani S, Natarajan J (2013) PPInterFinder-a mining tool for extracting causal relations on human proteins from literature. Database (Oxford) 2013:bas052
-
(2013)
Database (Oxford)
, vol.2013
, pp. 052
-
-
Raja, K.1
Subramani, S.2
Natarajan, J.3
-
260
-
-
84867665951
-
Studies on Shigella boydii infection in Caenorhabditis elegans and bioinformatics analysis of immune regulatory protein interactions
-
1:CAS:528:DC%2BC38XhtlSktr%2FJ 22841995
-
Kesika P, Balamurugan K (2012) Studies on Shigella boydii infection in Caenorhabditis elegans and bioinformatics analysis of immune regulatory protein interactions. Biochim Biophys Acta 1824(12):1449-1456
-
(2012)
Biochim Biophys Acta
, vol.1824
, Issue.12
, pp. 1449-1456
-
-
Kesika, P.1
Balamurugan, K.2
-
261
-
-
84862754618
-
Prediction of protein-protein interactions between Ralstonia solanacearum and Arabidopsis thaliana
-
1:CAS:528:DC%2BC38XmvFGks7o%3D 21786137
-
Li ZG et al (2012) Prediction of protein-protein interactions between Ralstonia solanacearum and Arabidopsis thaliana. Amino Acids 42(6):2363-2371
-
(2012)
Amino Acids
, vol.42
, Issue.6
, pp. 2363-2371
-
-
Li, Z.G.1
|