-
1
-
-
23844449940
-
Computer-based de novo design of drug-like molecules
-
DOI 10.1038/nrd1799
-
Schneider G, Fechner U. Computer-based de novo design of drug-like molecules. Nat. Rev. Drug Discov. 4, 649-663 (2005). (Pubitemid 41149759)
-
(2005)
Nature Reviews Drug Discovery
, vol.4
, Issue.8
, pp. 649-663
-
-
Schneider, G.1
Fechner, U.2
-
5
-
-
33745298429
-
Rational design of inhibitors that bind to inactive kinase conformations
-
DOI 10.1038/nchembio799, PII N799
-
Liu Y, Gray NS. Rational design of inhibitors that bind to inactive kinase conformations. Nat. Chem. Biol. 2, 358-364 (2006). (Pubitemid 43936934)
-
(2006)
Nature Chemical Biology
, vol.2
, Issue.7
, pp. 358-364
-
-
Liu, Y.1
Gray, N.S.2
-
6
-
-
61649114657
-
Kinase-targeted libraries: The design and synthesis of novel, potent, and selective kinase inhibitors
-
Akritopoulou-Zanze I, Hajduk PJ. Kinase-targeted libraries: the design and synthesis of novel, potent, and selective kinase inhibitors. Drug Discov. Today 14, 291-297 (2009).
-
(2009)
Drug Discov. Today
, vol.14
, pp. 291-297
-
-
Akritopoulou-Zanze, I.1
Hajduk, P.J.2
-
7
-
-
4944261336
-
Structural insights into the conformational selectivity of STI-571 and related kinase inhibitors
-
Mol CD, Fabbro D, Hosfeld DJ. Structural insights into the conformational selectivity of STI-571 and related kinase inhibitors. Curr. Opin. Drug Discov. Devel. 7, 639-648 (2004). (Pubitemid 39329866)
-
(2004)
Current Opinion in Drug Discovery and Development
, vol.7
, Issue.5
, pp. 639-648
-
-
Mol, C.D.1
Fabbro, D.2
Hosfield, D.J.3
-
8
-
-
0034665713
-
Structural mechanism for STI-571 inhibition of abelson tyrosine kinase
-
Schindler T, Bornmann W, Pellicena P, Miller WT, Clarkson B, Kuriyan J. Structural mechanism for STI-571 inhibition of abelson tyrosine kinase. Science 289, 1938-1942 (2000).
-
(2000)
Science
, vol.289
, pp. 1938-1942
-
-
Schindler, T.1
Bornmann, W.2
Pellicena, P.3
Miller, W.T.4
Clarkson, B.5
Kuriyan, J.6
-
9
-
-
18344395134
-
Inhibition of p38 MAP kinase by utilizing a novel allosteric binding site
-
DOI 10.1038/nsb770
-
Pargellis C, Tong L, Churchill L et al. Inhibition of p38 MAP kinase by utilizing a novel allosteric binding site. Nat. Struct. Biol. 9, 268-272 (2002). (Pubitemid 34289898)
-
(2002)
Nature Structural Biology
, vol.9
, Issue.4
, pp. 268-272
-
-
Pargellis, C.1
Tong, L.2
Churchill, L.3
Cirillo, P.F.4
Gilmore, T.5
Graham, A.G.6
Grob, P.M.7
Hickey, E.R.8
Moss, N.9
Pav, S.10
Regan, J.11
-
10
-
-
12144289677
-
Mechanism of activation of the RAF-ERK signaling pathway by oncogenic mutations of B-RAF
-
DOI 10.1016/S0092-8674(04)00215-6, PII S0092867404002156
-
Wan PT, Garnett MJ, Roe SM et al. Cancer Genome Project. Mechanism of activation of the RAF-ERK signaling pathway by oncogenic mutations of B-RAF. Cell 116, 855-867 (2004). (Pubitemid 38410730)
-
(2004)
Cell
, vol.116
, Issue.6
, pp. 855-867
-
-
Wan, P.T.C.1
Garnett, M.J.2
Roe, S.M.3
Lee, S.4
Niculescu-Duvaz, D.5
Good, V.M.6
Project, C.G.7
Jones, C.M.8
Marshall, C.J.9
Springer, C.J.10
Barford, D.11
Marais, R.12
-
11
-
-
12144290647
-
Advances in the structural biology, design and clinical development of VEGF-R kinase inhibitors for the treatment of angiogenesis
-
DOI 10.1016/j.bbapap.2003.11.010, PII S1570963903003625
-
Manley PW, Bold G, Brüggen J et al. Advances in the structural biology, design and clinical development of VEGF-R kinase inhibitors for the treatment of angiogenesis. Biochim. Biophys. Acta 1697, 17-27 (2004). (Pubitemid 38326758)
-
(2004)
Biochimica et Biophysica Acta - Proteins and Proteomics
, vol.1697
, Issue.1-2
, pp. 17-27
-
-
Manley, P.W.1
Bold, G.2
Bruggen, J.3
Fendrich, G.4
Furet, P.5
Mestan, J.6
Schnell, C.7
Stolz, B.8
Meyer, T.9
Meyhack, B.10
Stark, W.11
Strauss, A.12
Wood, J.13
-
12
-
-
5444244504
-
Novel, potent and selective anilinoquinazoline and anilinopyrimidine inhibitors of p38 MAP kinase
-
DOI 10.1016/j.bmcl.2004.08.007, PII S0960894X04010017
-
Cumming JG, McKenzie CL, Bowden SG et al. Novel, potent and selective anilino quinazoline and anilinopyrimidine inhibitors of p38 MAP kinase. Bioorg Med. Chem. Lett. 14, 5389-5394 (2004). (Pubitemid 39359133)
-
(2004)
Bioorganic and Medicinal Chemistry Letters
, vol.14
, Issue.21
, pp. 5389-5394
-
-
Cumming, J.G.1
McKenzie, C.L.2
Bowden, S.G.3
Campbell, D.4
Masters, D.J.5
Breed, J.6
Jewsbury, P.J.7
-
13
-
-
31344438721
-
SAR and inhibitor complex structure determination of a novel class of potent and specific Aurora kinase inhibitors
-
DOI 10.1016/j.bmcl.2005.11.053, PII S0960894X05014757
-
Heron NM, Anderson M, Blowers DP et al. SAR and inhibitor complex structure determination of a novel class of potent and specifc Aurora kinase inhibitors. Bioorg Med. Chem. Lett. 16, 1320-1323 (2006). (Pubitemid 43143015)
-
(2006)
Bioorganic and Medicinal Chemistry Letters
, vol.16
, Issue.5
, pp. 1320-1323
-
-
Heron, N.M.1
Anderson, M.2
Blowers, D.P.3
Breed, J.4
Eden, J.M.5
Green, S.6
Hill, G.B.7
Johnson, T.8
Jung, F.H.9
McMiken, H.H.J.10
Mortlock, A.A.11
Pannifer, A.D.12
Pauptit, R.A.13
Pink, J.14
Roberts, N.J.15
Rowsell, S.16
-
14
-
-
33745199815
-
Virtual ligand screening: Strategies, perspectives and limitations
-
Klebe G. Virtual ligand screening: strategies, perspectives and limitations. Drug Discov. Today 11, 580-594 (2006).
-
(2006)
Drug Discov. Today
, vol.11
, pp. 580-594
-
-
Klebe, G.1
-
15
-
-
77952732009
-
Bioisosteric replacement and scaffold hopping in lead generation and optimization
-
Langdon S, Ertl P, Brown N. Bioisosteric replacement and scaffold hopping in lead generation and optimization. Mol. Inf. 29, 366-385 (2010).
-
(2010)
Mol. Inf.
, vol.29
, pp. 366-385
-
-
Langdon, S.1
Ertl, P.2
Brown, N.3
-
16
-
-
58149102648
-
Type-II kinase inhibitor docking, screening, and profling using modifed structures of active kinase states
-
Kufareva I, Abagyan R. Type-II kinase inhibitor docking, screening, and profling using modifed structures of active kinase states. J. Med. Chem. 51, 7921-7932 (2008).
-
(2008)
J. Med. Chem.
, vol.51
, pp. 7921-7932
-
-
Kufareva, I.1
Abagyan, R.2
-
17
-
-
0034130399
-
De novo design of molecular architectures by evolutionary assembly of drug-derived building blocks
-
DOI 10.1023/A:1008184403558
-
Schneider G, Lee ML, Stahl M, Schneider P. De novo design of molecular architectures by evolutionary assembly of drug-derived building blocks. J. Comput. Aided Mol. Des. 14, 487-494(2000). (Pubitemid 30386823)
-
(2000)
Journal of Computer-Aided Molecular Design
, vol.14
, Issue.5
, pp. 487-494
-
-
Schneider, G.1
Lee, M.-L.2
Stahl, M.3
Schneider, P.4
-
18
-
-
0032058905
-
RECAP - Retrosynthetic Combinatorial Analysis Procedure: A powerful new technique for identifying privileged molecular fragments with useful applications in combinatorial chemistry
-
Lewell XQ, Judd DB, Watson SP, Hann MM. RECAP-retrosynthetic combinatorial ana lysis procedure: a powerful new technique for identifying privileged molecular fragments with useful applications in combinatorial chemistry J. Chem. Inf. Comput. Sci. 38, 511-522 (1998). (Pubitemid 128594467)
-
(1998)
Journal of Chemical Information and Computer Sciences
, vol.38
, Issue.3
, pp. 511-522
-
-
Lewell, X.Q.1
Judd, D.B.2
Watson, S.P.3
Hann, M.M.4
-
19
-
-
0030039619
-
The art and practice of structure-based drug design: A molecular modeling perspective
-
DOI 10.1002/(SICI)1098-1128(199601)16:1<3::AID-MED1>3.0.CO;2-6
-
Bohacek RS, McMartin C, Guida WC. The art and practice of structure-based drug design: a molecular modeling perspective. Med. Res. Rev. 16, 3-50 (1996). (Pubitemid 26037075)
-
(1996)
Medicinal Research Reviews
, vol.16
, Issue.1
, pp. 3-50
-
-
Bohacek, R.S.1
McMartin, C.2
Guida, W.C.3
-
20
-
-
16244388286
-
Virtual exploration of the small-molecule chemical universe below 160 daltons
-
DOI 10.1002/anie.200462457
-
Fink T, Bruggesser H, Reymond JL. Virtual exploration of the small-molecule chemical universe below 160 Daltons. Angew. Chem. Int. Ed. Engl. 44, 1504-1508 (2005). (Pubitemid 40460043)
-
(2005)
Angewandte Chemie - International Edition
, vol.44
, Issue.10
, pp. 1504-1508
-
-
Fink, T.1
Bruggesser, H.2
Reymond, J.-L.3
-
21
-
-
34250643033
-
A quantitative approach to the estimation of chemical space from a given geometry by the combination of atomic species
-
DOI 10.1002/qsar.200630037
-
Ogata K, Isomura T, Yamashita H, Kubodera H. A quantitative approach to the estimation of chemical space from a given geometry by the combination of atomic species. QSAR Comb. Sci. 26, 596-607 (2007). (Pubitemid 46938089)
-
(2007)
QSAR and Combinatorial Science
, vol.26
, Issue.5
, pp. 596-607
-
-
Ogata, K.1
Isomura, T.2
Yamashita, H.3
Kubodera, H.4
-
22
-
-
0034923575
-
Similarity searching in large combinatorial chemistry spaces
-
DOI 10.1023/A:1011144622059
-
Rarey M, Stahl M. Similarity searching in large combinatorial chemistry spaces. J. Comput. Aided Mol. Des. 15, 497-520 (2001). (Pubitemid 32680852)
-
(2001)
Journal of Computer-Aided Molecular Design
, vol.15
, Issue.6
, pp. 497-520
-
-
Rarey, M.1
Stahl, M.2
-
23
-
-
37249009571
-
Kernel approach to molecular similarity based on iterative graph similarity
-
DOI 10.1021/ci700274r
-
Rupp M, Proschak E, Schneider G. Kernel approach to molecular similarity based on iterative graph similarity. J. Chem. Inf. Model. 47, 2280-2286 (2007). (Pubitemid 350275094)
-
(2007)
Journal of Chemical Information and Modeling
, vol.47
, Issue.6
, pp. 2280-2286
-
-
Rupp, M.1
Proschak, E.2
Schneider, G.3
-
24
-
-
75749099299
-
From machine learning to natural product derivatives that selectively activate transcription factor PPARγ
-
Rupp M, Schroeter T, Steri R et al. From machine learning to natural product derivatives that selectively activate transcription factor PPARγ. Chem Med Chem 5, 191-194 (2010).
-
(2010)
Chem Med Chem
, vol.5
, pp. 191-194
-
-
Rupp, M.1
Schroeter, T.2
Steri, R.3
-
25
-
-
72049100230
-
Identifcation and validation of a potent type II inhibitor of inactive polo-like kinase 1
-
Keppner S, Proschak E, Schneider G, Spänkuch B. Identifcation and validation of a potent type II inhibitor of inactive polo-like kinase 1. Chem Med Chem 4, 1806-1809 (2009).
-
(2009)
Chem Med Chem
, vol.4
, pp. 1806-1809
-
-
Keppner, S.1
Proschak, E.2
Schneider, G.3
Spänkuch, B.4
-
26
-
-
77953170553
-
Biological impact of freezing Plk1 in its inactive conformation in cancer cells
-
Keppner S, Proschak E, Kaufmann M, Strebhardt K, Schneider G, Spänkuch B. Biological impact of freezing Plk1 in its inactive conformation in cancer cells. Cell Cycle 9, 761-773 (2010).
-
(2010)
Cell Cycle
, vol.9
, pp. 761-773
-
-
Keppner, S.1
Proschak, E.2
Kaufmann, M.3
Strebhardt, K.4
Schneider, G.5
Spänkuch, B.6
-
27
-
-
77955167321
-
Multifaceted polo-like kinases: Drug targets and antitargets for cancer therapy
-
Strebhardt K. Multifaceted polo-like kinases: drug targets and antitargets for cancer therapy. Nat. Rev. Drug Discov. 9, 643-660 (2010).
-
(2010)
Nat. Rev. Drug Discov.
, vol.9
, pp. 643-660
-
-
Strebhardt, K.1
-
28
-
-
0242467732
-
Collection of Bioactive Reference Compounds for Focused Library Design
-
Schneider P, Schneider G. Collection of bioactive reference compounds for focused library design. QSAR Comb. Sci. 22, 713-718 (2003). (Pubitemid 37391067)
-
(2003)
QSAR and Combinatorial Science
, vol.22
, Issue.7
, pp. 713-718
-
-
Schneider, P.1
Schneider, G.2
-
29
-
-
0033954256
-
The Protein Data Bank
-
Berman HM, Westbrook J, Feng Z et al. The Protein Data Bank. Nucleic Acids Res. 28, 235-242 (2000). (Pubitemid 30047768)
-
(2000)
Nucleic Acids Research
, vol.28
, Issue.1
, pp. 235-242
-
-
Berman, H.M.1
Westbrook, J.2
Feng, Z.3
Gilliland, G.4
Bhat, T.N.5
Weissig, H.6
Shindyalov, I.N.7
Bourne, P.E.8
-
30
-
-
0033523672
-
'Scaffold-Hopping' by topological pharmacophore search: A contribution to virtual screening
-
DOI 10.1002/(SICI)1521-3773(19991004)38:19<2894::AID-ANIE2894>3.0. CO;2-F
-
Schneider G, Neidhart W, Giller T, Schmid G. 'Scaffold-Hopping' by topological pharmacophore search: a contribution to virtual screening. Angew. Chem. Int. Ed. Engl. 38, 2894-2896 (1999). (Pubitemid 29479958)
-
(1999)
Angewandte Chemie - International Edition
, vol.38
, Issue.19
, pp. 2894-2896
-
-
Schneider, G.1
Neidhart, W.2
Giller, T.3
Schmid, G.4
-
32
-
-
39049085817
-
The concept of template-based de novo design from drug-derived molecular fragments and its application to TAR RNA
-
DOI 10.1007/s10822-007-9157-4
-
Schüller A, Suhartono M, Fechner U et al. The concept of template-based de novo design from drug-derived molecular fragments and its application to TAR RNA. J. Comput. Aided Mol. Des. 22, 59-68 (2008). (Pubitemid 351247979)
-
(2008)
Journal of Computer-Aided Molecular Design
, vol.22
, Issue.2
, pp. 59-68
-
-
Schuller, A.1
Suhartono, M.2
Fechner, U.3
Tanrikulu, Y.4
Breitung, S.5
Scheffer, U.6
Gobel, M.W.7
Schneider, G.8
-
33
-
-
57849156863
-
Voyages to the (un)known: Adaptive design of bioactive compounds
-
Schneider G, Hartenfeller M, Reutlinger M, Tanrikulu Y, Proschak E, Schneider P. Voyages to the (un)known: adaptive design of bioactive compounds. Trends Biotechnol. 27, 18-26 (2009).
-
(2009)
Trends Biotechnol.
, vol.27
, pp. 18-26
-
-
Schneider, G.1
Hartenfeller, M.2
Reutlinger, M.3
Tanrikulu, Y.4
Proschak, E.5
Schneider, P.6
-
34
-
-
35748952229
-
Small molecule inhibitors of AKT/PKB kinase as a strategy for treating cancer
-
Heerding DA, Safanov IG, Verma SK. Small molecule inhibitors of AKT/PKB kinase as a strategy for treating cancer. Annu. Rep. Med. Chem. 42, 365-376 (2007).
-
(2007)
Annu. Rep. Med. Chem.
, vol.42
, pp. 365-376
-
-
Heerding, D.A.1
Safanov, I.G.2
Verma, S.K.3
-
35
-
-
0035833021
-
Nucleoside analogues as highly potent and selective inhibitors of herpes simplex virus thymidine kinase
-
DOI 10.1016/S0960-894X(01)00256-6, PII S0960894X01002566
-
Martin JA, Lambert RW, Merrett JH et al. Nucleoside analogues as highly potent and selective inhibitors of herpes simplex virus thymidine kinase. Bioorg Med. Chem. Lett. 11, 1655-1658 (2001). (Pubitemid 32568290)
-
(2001)
Bioorganic and Medicinal Chemistry Letters
, vol.11
, Issue.13
, pp. 1655-1658
-
-
Martin, J.A.1
Lambert, R.W.2
Merrett, J.H.3
Parkes, K.E.B.4
Thomas, G.J.5
Baker, S.J.6
Bushnell, D.J.7
Cansfield, J.E.8
Dunsdon, S.J.9
Freeman, A.C.10
Hopkins, R.A.11
Johns, I.R.12
Keech, E.13
Simmonite, H.14
Walmsley, A.15
Wong Kai-In, P.16
Holland, M.17
-
36
-
-
0031431303
-
Checking the projection display of multivariate data with colored graphs
-
DOI 10.1016/S0263-7855(97)00078-7, PII S0263785597000787
-
Bienfait B, Gasteiger J. Checking the projection display of multivariate data with colored graphs. J. Mol. Graph. Model. 15, 203-215, 254-258 (1997). (Pubitemid 28139450)
-
(1997)
Journal of Molecular Graphics and Modelling
, vol.15
, Issue.4
, pp. 203-215
-
-
Bienfait, B.1
Gasteiger, J.2
-
37
-
-
0042202919
-
Chemography: The art of navigating in chemical space
-
DOI 10.1021/cc0000388
-
Oprea TI, Gottfries J. Chemography: the art of navigating in chemical space. J. Comb. Chem. 3, 157-166 (2001). (Pubitemid 33614499)
-
(2001)
Journal of Combinatorial Chemistry
, vol.3
, Issue.2
, pp. 157-166
-
-
Oprea, T.I.1
Gottfries, J.2
-
39
-
-
61949313682
-
Self-organizing maps in drug discovery: Compound library design, scaffold-hopping, repurposing
-
Schneider P, Tanrikulu Y, Schneider G. Self-organizing maps in drug discovery: compound library design, scaffold-hopping, repurposing. Curr. Med. Chem. 16, 258-266 (2009).
-
(2009)
Curr. Med. Chem.
, vol.16
, pp. 258-266
-
-
Schneider, P.1
Tanrikulu, Y.2
Schneider, G.3
-
40
-
-
0028854034
-
Molecular recognition of receptor sites using a genetic algorithm with a description of desolvation
-
Jones G, Willett P, Glen RC. Molecular recognition of receptor sites using a genetic algorithm with a description of desolvation. J. Mol. Biol. 245, 43-53 (1995).
-
(1995)
J. Mol. Biol.
, vol.245
, pp. 43-53
-
-
Jones, G.1
Willett, P.2
Glen, R.C.3
-
41
-
-
34249076619
-
Structure of the catalytic domain of human polo-like kinase 1
-
DOI 10.1021/bi602474j
-
Kothe M, Kohls D, Low S et al. Structure of the catalytic domain of human polo-like kinase 1. Biochemistry 46, 5960-5971 (2007). (Pubitemid 46799158)
-
(2007)
Biochemistry
, vol.46
, Issue.20
, pp. 5960-5971
-
-
Kothe, M.1
Kohls, D.2
Low, S.3
Coli, R.4
Cheng, A.C.5
Jacques, S.L.6
Johnson, T.L.7
Lewis, C.8
Loh, C.9
Nonomiya, J.10
Sheils, A.L.11
Verdries, K.A.12
Wynn, T.A.13
Kuhn, C.14
Ding, Y.-H.15
-
43
-
-
26444468103
-
General and targeted statistical potentials for protein-ligand interactions
-
DOI 10.1002/prot.20588
-
Mooij WTM, Verdonk ML. General and targeted statistical potentials for protein-ligand interactions. Proteins 61, 272-287 (2005). (Pubitemid 41429135)
-
(2005)
Proteins: Structure, Function and Genetics
, vol.61
, Issue.2
, pp. 272-287
-
-
Mooij, W.T.M.1
Verdonk, M.L.2
-
44
-
-
34547341277
-
PocketPicker: Ana lysis of ligand binding sites with shape descriptors
-
Weisel M, Proschak E, Schneider G. PocketPicker: ana lysis of ligand binding sites with shape descriptors. Chem. Cent. J. 1, 7 (2007).
-
(2007)
Chem. Cent. J.
, vol.1
, pp. 7
-
-
Weisel, M.1
Proschak, E.2
Schneider, G.3
-
45
-
-
78649849859
-
Self-organizing fuzzy graphs for structure-based comparison of protein pockets
-
Reisen F, Weisel M, Kriegl JM, Schneider G. Self-organizing fuzzy graphs for structure-based comparison of protein pockets. J. Proteome Res. 9, 6498-6510 (2010).
-
(2010)
J. Proteome Res.
, vol.9
, pp. 6498-6510
-
-
Reisen, F.1
Weisel, M.2
Kriegl, J.M.3
Schneider, G.4
-
46
-
-
20444422149
-
The PDBbind database: Methodologies and updates
-
DOI 10.1021/jm048957q
-
Wang R, Fang X, Lu Y, Yang CY, Wang S. The PDBbind database: methodologies and updates. J. Med. Chem. 48, 4111-4119 (2005). (Pubitemid 40800619)
-
(2005)
Journal of Medicinal Chemistry
, vol.48
, Issue.12
, pp. 4111-4119
-
-
Wang, R.1
Fang, X.2
Lu, Y.3
Yang, C.-Y.4
Wang, S.5
-
47
-
-
0036406643
-
A new method to detect related function among proteins independent of sequence and fold homology
-
DOI 10.1016/S0022-2836(02)00811-2
-
Schmitt S, Kuhn D, Klebe G. A new method to detect related function among proteins independent of sequence and fold homology J. Mol. Biol. 323, 387-406 (2002). (Pubitemid 35283699)
-
(2002)
Journal of Molecular Biology
, vol.323
, Issue.2
, pp. 387-406
-
-
Schmitt, S.1
Kuhn, D.2
Klebe, G.3
-
48
-
-
2942534101
-
+-dependent Sir2 histone/protein deacetylases
-
DOI 10.1073/pnas.0401057101
-
Zhao K, Harshaw R, Chai X, Marmorstein R. Structural basis for nicotinamide cleavage and ADP-ribose transfer by NAD(+)-dependent Sir2 histone/protein deacetylases. Proc Natl. Acad. Sci. USA 101, 8563-8568 (2004). (Pubitemid 38745810)
-
(2004)
Proceedings of the National Academy of Sciences of the United States of America
, vol.101
, Issue.23
, pp. 8563-8568
-
-
Zhao, K.1
Harshaw, R.2
Chai, X.3
Marmorstein, R.4
-
49
-
-
0032959590
-
Structural basis for inhibition of the Hsp90 molecular chaperone by the antitumor antibiotics radicicol and geldanamycin
-
DOI 10.1021/jm980403y
-
Roe SM, Prodromou C, O'Brien R, Ladbury JE, Piper PW, Pearl LH. Structural basis for inhibition of the Hsp90 molecular chaperone by the antitumor antibiotics radicicol and geldanamycin. J. Med. Chem. 42, 260-266 (1999). (Pubitemid 29069861)
-
(1999)
Journal of Medicinal Chemistry
, vol.42
, Issue.2
, pp. 260-266
-
-
Roe, S.M.1
Prodromou, C.2
O'Brien, R.3
Ladbury, J.E.4
Piper, P.W.5
Pearl, L.H.6
-
50
-
-
0036311017
-
Crystal structure of a non-canonical low-affinity peptide complexed with MHC class I: A new approach for vaccine design
-
DOI 10.1016/S0022-2836(02)00196-1
-
Apostolopoulos V, Yu M, Corper AL et al. Crystal structure of a non-canonical low-affnity peptide complexed with MHC class I: a new approach for vaccine design. J. Mol. Biol. 318, 1293-1305 (2002). (Pubitemid 34753998)
-
(2002)
Journal of Molecular Biology
, vol.318
, Issue.5
, pp. 1293-1305
-
-
Apostolopoulos, V.1
Yu, M.2
Corper, A.L.3
Teyton, L.4
Pietersz, G.A.5
McKenzie, I.F.C.6
Wilson, I.A.7
-
51
-
-
0035834530
-
Crystal structure of the liganded SCP-2-like domain of human peroxisomal multifunctional enzyme type 2 at 1.75 Å resolution
-
DOI 10.1006/jmbi.2001.5084
-
Haapalainen AM, van Aalten DM, Meriläinen G et al. Crystal structure of the liganded SCP-2-like domain of human peroxisomal multifunctional enzyme type II at 1.75 Å resolution. J. Mol. Biol. 313, 1127-1138 (2001). (Pubitemid 33081906)
-
(2001)
Journal of Molecular Biology
, vol.313
, Issue.5
, pp. 1127-1138
-
-
Haapalainen, A.M.1
Van Aalten, D.M.F.2
Merilainen, G.3
Jalonen, J.E.4
Pirila, P.5
Wierenga, R.K.6
Hiltunen, J.K.7
Glumoff, T.8
-
52
-
-
33646452447
-
Design, synthesis and X-ray structure of protein-ligand complexes: Important insight into selectivity of memapsin 2 (ß-secretase) inhibitors
-
Ghosh AK, Kumaragurubaran N, Hong L et al. Design, synthesis and X-ray structure of protein-ligand complexes: important insight into selectivity of memapsin 2 (ß-secretase) inhibitors. J. Am. Chem. Soc 128, 5310-5311 (2006).
-
(2006)
J. Am. Chem. Soc
, vol.128
, pp. 5310-5311
-
-
Ghosh, A.K.1
Kumaragurubaran, N.2
Hong, L.3
-
53
-
-
67649946943
-
The protein tyrosine kinase inhibitors imatinib and nilotinib strongly inhibit several mammalian α-carbonic anhydrase isoforms
-
Parkkila S, Innocenti A, Kallio H, Hilvo M, Scozzafava A, Supuran CT. The protein tyrosine kinase inhibitors imatinib and nilotinib strongly inhibit several mammalian α-carbonic anhydrase isoforms. Bioorg. Med. Chem. Lett. 19, 4102-4106 (2009).
-
(2009)
Bioorg. Med. Chem. Lett.
, vol.19
, pp. 4102-4106
-
-
Parkkila, S.1
Innocenti, A.2
Kallio, H.3
Hilvo, M.4
Scozzafava, A.5
Supuran, C.T.6
-
54
-
-
33846931644
-
The small-molecule inhibitor BI 2536 reveals novel insights into mitotic roles of polo-like kinase 1
-
Lénárt P, Petronczki M, Steegmaier M. The small-molecule inhibitor BI 2536 reveals novel insights into mitotic roles of polo-like kinase 1. Curr. Biol. 17, 304-315 (2007).
-
(2007)
Curr. Biol.
, vol.17
, pp. 304-315
-
-
Lénárt, P.1
Petronczki, M.2
Steegmaier, M.3
-
55
-
-
33846933218
-
BI 2536, a Potent and Selective Inhibitor of Polo-like Kinase 1, Inhibits Tumor Growth In Vivo
-
DOI 10.1016/j.cub.2006.12.037, PII S0960982206026716
-
Steegmaier M, Hoffmann M, Baum A et al. BI 2536, a potent and selective inhibitor of polo-like kinase 1, inhibits tumor growth in vivo. Curr. Biol. 17, 316-322 (2007). (Pubitemid 46241881)
-
(2007)
Current Biology
, vol.17
, Issue.4
, pp. 316-322
-
-
Steegmaier, M.1
Hoffmann, M.2
Baum, A.3
Lenart, P.4
Petronczki, M.5
Krssak, M.6
Gurtler, U.7
Garin-Chesa, P.8
Lieb, S.9
Quant, J.10
Grauert, M.11
Adolf, G.R.12
Kraut, N.13
Peters, J.-M.14
Rettig, W.J.15
-
56
-
-
0037046495
-
Downregulation of human polo-like kinase activity by antisense oligonucleotides induces growth inhibition in cancer cells
-
DOI 10.1038/sj/onc/1205412
-
Spänkuch-Schmitt B, Wolf G et al. Downregulation of human polo-like kinase activity by antisense oligonucleotides induces growth inhibition in cancer cells. Oncogene 21, 3162-3171 (2002). (Pubitemid 34548087)
-
(2002)
Oncogene
, vol.21
, Issue.20
, pp. 3162-3171
-
-
Spankuch-Schmitt, B.1
Wolf, G.2
Solbach, C.3
Loibl, S.4
Knecht, R.5
Stegmuller, M.6
Von Minckwitz, G.7
Kaufmann, M.8
Strebhardt, K.9
-
57
-
-
67649225348
-
Effcient drug lead discovery and optimization
-
Jorgensen WL. Effcient drug lead discovery and optimization. Acc. Chem. Res. 42, 724-733 (2009).
-
(2009)
Acc. Chem. Res.
, vol.42
, pp. 724-733
-
-
Jorgensen, W.L.1
-
58
-
-
4043121114
-
Computational chemogenomics approaches to systematic knowledge-based drug discovery
-
Mestres J. Computational chemogenomics approaches to systematic knowledge-based drug discovery. Curr. Opin. Drug Discov. Devel. 7, 304-313 (2004). (Pubitemid 44120947)
-
(2004)
Current Opinion in Drug Discovery and Development
, vol.7
, Issue.3
, pp. 304-313
-
-
Mestres, J.1
-
59
-
-
77952664105
-
Self-organizing molecular fngerprints: A ligand-based view on drug-like chemical space and off-target prediction
-
Schneider G, Tanrikulu Y, Schneider P. Self-organizing molecular fngerprints: a ligand-based view on drug-like chemical space and off-target prediction. Future Med. Chem. 1, 213-218 (2009).
-
(2009)
Future Med. Chem.
, vol.1
, pp. 213-218
-
-
Schneider, G.1
Tanrikulu, Y.2
Schneider, P.3
-
60
-
-
45349108801
-
Functional classifcation of protein kinase binding sites using Cavbase
-
Kuhn D, Weskamp N, Hüllermeier E, Klebe G. Functional classifcation of protein kinase binding sites using Cavbase. Chem Med Chem 2, 1432-1447 (2007).
-
(2007)
Chem Med Chem
, vol.2
, pp. 1432-1447
-
-
Kuhn, D.1
Weskamp, N.2
Hüllermeier, E.3
Klebe, G.4
-
61
-
-
65249170904
-
Binding site similarity ana lysis for the functional classifcation of the protein kinase family J
-
Kinnings SL, Jackson RM. Binding site similarity ana lysis for the functional classifcation of the protein kinase family J. Chem. Inf. Model. 42, 318-329 (2009).
-
(2009)
Chem. Inf. Model.
, vol.42
, pp. 318-329
-
-
Kinnings, S.L.1
Jackson, R.M.2
-
62
-
-
77956040404
-
Predicting polypharmacology by binding site similarity: From kinases to the protein universe
-
Milletti F, Vulpetti A. Predicting polypharmacology by binding site similarity: from kinases to the protein universe. J. Chem. Inf. Model. 50, 1418-1431 (2010).
-
(2010)
J. Chem. Inf. Model.
, vol.50
, pp. 1418-1431
-
-
Milletti, F.1
Vulpetti, A.2
-
63
-
-
78649844432
-
Activity landscape representations for structure-activity relationship ana lysis
-
Wassermann AM, Wawer M, Bajorath J. Activity landscape representations for structure-activity relationship ana lysis. J. Med. Chem. 53, 8209-8223 (2010).
-
(2010)
J. Med. Chem.
, vol.53
, pp. 8209-8223
-
-
Wassermann, A.M.1
Wawer, M.2
Bajorath, J.3
-
64
-
-
65249087355
-
Characterization of activity landscapes using 2D and 3D similarity methods: Consensus activity cliffs
-
Medina-Franco JL, Martínez-Mayorga K, Bender A et al. Characterization of activity landscapes using 2D and 3D similarity methods: consensus activity cliffs. J. Chem. Inf. Model. 49, 477-491 (2009).
-
(2009)
J. Chem. Inf. Model.
, vol.49
, pp. 477-491
-
-
Medina-Franco, J.L.1
Martínez-Mayorga, K.2
Bender, A.3
-
66
-
-
65349119372
-
Chemistry: Thinking outside the fask
-
Davey S. Chemistry: thinking outside the fask. Nature 458, 294 (2009).
-
(2009)
Nature
, vol.458
, pp. 294
-
-
Davey, S.1
-
67
-
-
77950503976
-
Virtual screening: An endless staircase?
-
Schneider G. Virtual screening: an endless staircase? Nat. Rev. Drug Discov. 9, 273-276 (2010).
-
(2010)
Nat. Rev. Drug Discov.
, vol.9
, pp. 273-276
-
-
Schneider, G.1
-
68
-
-
0000191614
-
Stochastic algorithms for maximizing molecular diversity
-
Agrafotis DK. Stochastic algorithms for maximizing molecular diversity. J. Chem. Inf. Comp. Sci. 37, 841-851 (1997).
-
(1997)
J. Chem. Inf. Comp. Sci.
, vol.37
, pp. 841-851
-
-
Agrafotis, D.K.1
-
69
-
-
78650209298
-
Stochastic proximity embedding: Methods and applications
-
Agrafotis DK, Xu H, Zhu F, Banyopadhyay D, Liu P. Stochastic proximity embedding: methods and applications. Mol. Inf. 29, 758-770 (2009).
-
(2009)
Mol. Inf.
, vol.29
, pp. 758-770
-
-
Agrafotis, D.K.1
Xu, H.2
Zhu, F.3
Banyopadhyay, D.4
Liu, P.5
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