-
1
-
-
0035355459
-
Determinants for hairpin formation in Tn10 transposition
-
Allingham JS, Wardle SJ and Haniford DB. 2001. Determinants for hairpin formation in Tn10 transposition. EMBO J 20:2931-2942.
-
(2001)
EMBO J
, vol.20
, pp. 2931-2942
-
-
Allingham, J.S.1
Wardle, S.J.2
Haniford, D.B.3
-
2
-
-
0029162412
-
A role for the KP leucine zipper in regulating P element transposition in Drosophila melanogaster
-
Andrews JD and Gloor GB. 1995. A role for the KP leucine zipper in regulating P element transposition in Drosophila melanogaster. Genet 141:587-594.
-
(1995)
Genet
, vol.141
, pp. 587-594
-
-
Andrews, J.D.1
Gloor, G.B.2
-
3
-
-
0028120546
-
Atomic structure of the RuvC resolvase: A holliday junction-specific endonuclease from E. coli
-
DOI 10.1016/0092-8674(94)90280-1
-
Ariyoshi M, Vassylyev DG, Iwasaki H, Nakamura H, Shinagawa H and Morikawa K. 1994. Atomic structure of the RuvC resolvase: A Holliday junction-specifc endonuclease from E. coli. Cell 78:1063-1072. (Pubitemid 24292333)
-
(1994)
Cell
, vol.78
, Issue.6
, pp. 1063-1072
-
-
Ariyoshi, M.1
Vassylyev, D.G.2
Iwasaki, H.3
Nakamura, H.4
Shinagawa, H.5
Morikawa, K.6
-
4
-
-
33845873578
-
The natural history of the WRKY-GCM1 zinc fngers and the relationship between transcription factors and transposons
-
Babu MM, Iyer LM, Balaji S and Aravind L. 2006. The natural history of the WRKY-GCM1 zinc fngers and the relationship between transcription factors and transposons. Nucl Acids Res 34:6505-6520.
-
(2006)
Nucl Acids Res
, vol.34
, pp. 6505-6520
-
-
Babu, M.M.1
Iyer, L.M.2
Balaji, S.3
Aravind, L.4
-
6
-
-
0027203762
-
Division of labor among monomers within the Mu transposase tetramer
-
Baker TA, Mizuuchi M, Savilahti H and Mizuuchi K. 1993. Division of labor among monomers within the Mu transposase tetramer. Cell 74:723-733.
-
(1993)
Cell
, vol.74
, pp. 723-733
-
-
Baker, T.A.1
Mizuuchi, M.2
Savilahti, H.3
Mizuuchi, K.4
-
7
-
-
0037428412
-
Functional oligomeric state of avian sarcoma virus integrase
-
Bao KK, Wang H, Miller JK, Erie DA, Skalka AM and Wong I. 2003. Functional oligomeric state of avian sarcoma virus integrase. J Biol Chem 278:1323-1327.
-
(2003)
J Biol Chem
, vol.278
, pp. 1323-1327
-
-
Bao, K.K.1
Wang, H.2
Miller, J.K.3
Erie, D.A.4
Skalka, A.M.5
Wong, I.6
-
8
-
-
65349136539
-
New superfamilies of eukaryotic DNA transposons and their internal divisions
-
Bao W, Jurka MG, Kapitonov VV and Jurka J. 2009. New superfamilies of eukaryotic DNA transposons and their internal divisions. Mol Biol Evol 26:983-993.
-
(2009)
Mol Biol Evol
, vol.26
, pp. 983-993
-
-
Bao, W.1
Jurka, M.G.2
Kapitonov, V.V.3
Jurka, J.4
-
9
-
-
38649116679
-
Mechanism of IS200/IS605 family transposases: Activation and transposon-directed target site selection
-
Barabas O, Ronning DR, Guynet C, Hickman AB, Ton-Hoang B, Chandler M and Dyda F. 2008. Mechanism of IS200/IS605 family transposases: Activation and transposon-directed target site selection. Cell 132:208-220.
-
(2008)
Cell
, vol.132
, pp. 208-220
-
-
Barabas, O.1
Ronning, D.R.2
Guynet, C.3
Hickman, A.B.4
Ton-Hoang, B.5
Chandler, M.6
Dyda, F.7
-
10
-
-
0026019625
-
Structural basis for the 3′-5′ exonuclease activity of Escherichia coli DNA polymerase I: A two metal ion mechanism
-
Beese LS and Steitz TA. 1991. Structural basis for the 3′-5′ exonuclease activity of Escherichia coli DNA polymerase I: a two metal ion mechanism. EMBO J 10:25-33.
-
(1991)
EMBO J
, vol.10
, pp. 25-33
-
-
Beese, L.S.1
Steitz, T.A.2
-
11
-
-
0035085110
-
Transposase and cointegrase: Specialized transposition proteins of the bacterial insertion sequence IS21 and related elements
-
Berger B and Haas D. 2001. Transposase and cointegrase: specialized transposition proteins of the bacterial insertion sequence IS21 and related elements. Cell Mol Life Sci 58:403-419.
-
(2001)
Cell Mol Life Sci
, vol.58
, pp. 403-419
-
-
Berger, B.1
Haas, D.2
-
12
-
-
0029826129
-
Computer analyses reveal a hobo-like element in the nematode Caenorhabditis elegans, which presents a conserved transposase domain common with the Tc1-Mariner transposon family
-
Bigot Y, Auge-Gouillou C and Periquet G. 1996. Computer analyses reveal a hobo-like element in the nematode Caenorhabditis elegans, which presents a conserved transposase domain common with the Tc1-Mariner transposon family. Gene 174:265-271.
-
(1996)
Gene
, vol.174
, pp. 265-271
-
-
Bigot, Y.1
Auge-Gouillou, C.2
Periquet, G.3
-
13
-
-
34250351876
-
Base-fipping dynamics in a DNA hairpin processing reaction
-
Bischerour J and Chalmers R. 2007. Base-fipping dynamics in a DNA hairpin processing reaction. Nucleic Acids Res 35:2584-2595.
-
(2007)
Nucleic Acids Res
, vol.35
, pp. 2584-2595
-
-
Bischerour, J.1
Chalmers, R.2
-
14
-
-
67650520157
-
Base Flipping in Tn10 Transposition: An active fip and capture mechanism
-
Bischerour J and Chalmers R. 2009. Base Flipping in Tn10 Transposition: An active fip and capture mechanism. PLoS ONE 4:e6201.
-
(2009)
PLoS ONE
, vol.4
-
-
Bischerour, J.1
Chalmers, R.2
-
15
-
-
23144444979
-
Protein structure prediction servers at University College London
-
Bryson K, McGufn LJ, Marsden RL, Ward JJ, Sodhi JS and Jones DT. 2005. Protein structure prediction servers at University College London. Nucl Acids Res 33:W36-W38.
-
(2005)
Nucl Acids Res
, vol.33
-
-
Bryson, K.1
McGufn, L.J.2
Marsden, R.L.3
Ward, J.J.4
Sodhi, J.S.5
Jones, D.T.6
-
16
-
-
18244392678
-
Piv site-specifc invertase requires a DEDD motif analogous to the catalytic center of the RuvC Holliday junction resolvases
-
Buchner JM, Robertson AE, Poynter DJ, Denniston SS and Karls AC. 2005. Piv site-specifc invertase requires a DEDD motif analogous to the catalytic center of the RuvC Holliday junction resolvases. J Bacteriol 187:3431-3437.
-
(2005)
J Bacteriol
, vol.187
, pp. 3431-3437
-
-
Buchner, J.M.1
Robertson, A.E.2
Poynter, D.J.3
Denniston, S.S.4
Karls, A.C.5
-
17
-
-
0024449118
-
Transposon mutagenesis of baculoviruses: Analysis of Trichoplusiani Transposon IFP2 insertions within the FP-locus of nuclear polyhedrosis viruses
-
Cary LC, Goebel M, Corsaro BG, Wang HG, Rosen E, and Fraser MJ. 1989. Transposon mutagenesis of baculoviruses: Analysis of Trichoplusiani Transposon IFP2 insertions within the FP-locus of nuclear polyhedrosis viruses. Virol 172:156-169.
-
(1989)
Virol
, vol.172
, pp. 156-169
-
-
Cary, L.C.1
Goebel, M.2
Corsaro, B.G.3
Wang, H.G.4
Rosen, E.5
Fraser, M.J.6
-
18
-
-
0021182791
-
IS30, a new insertion sequence of Escherichia coli K12
-
Caspers P, Dalrymple B, Iida S and Arber W. 1984. IS30, a new insertion sequence of Escherichia coli K12. Mol Gen Genet 196:68-73.
-
(1984)
Mol Gen Genet
, vol.196
, pp. 68-73
-
-
Caspers, P.1
Dalrymple, B.2
Iida, S.3
Arber, W.4
-
19
-
-
67649518035
-
Homology modeling in drug discover: Current trends and applications
-
Cavasotto CN and Phatak SS. 2009. Homology modeling in drug discover: current trends and applications. Drug Disc. Today 14:676-683.
-
(2009)
Drug Disc. Today
, vol.14
, pp. 676-683
-
-
Cavasotto, C.N.1
Phatak, S.S.2
-
20
-
-
0002128545
-
-
Craig NL, Craigie R, Gellert M and Lambowitz AM, eds, Mobile DNA II, Washington, DC: ASM Press
-
Chaconas G and Harshey RM. 2002. Transposition of phage Mu DNA, pp. 384-402. In: Craig NL, Craigie R, Gellert M and Lambowitz AM, eds, Mobile DNA II, Washington, DC: ASM Press.
-
(2002)
Transposition of Phage Mu DNA
, pp. 384-402
-
-
Chaconas, G.1
Harshey, R.M.2
-
21
-
-
0000257294
-
-
Craig NL, Craigie R, Gellert M and Lambowitz AM, eds, Mobile DNA II, Washington, DC: ASM Press
-
Chandler M and Mahillon J. 2002. Insertion sequences revisited, pp. 305-366. In: Craig NL, Craigie R, Gellert M and Lambowitz AM, eds, Mobile DNA II, Washington, DC: ASM Press.
-
(2002)
Insertion Sequences Revisited
, pp. 305-366
-
-
Chandler, M.1
Mahillon, J.2
-
22
-
-
37549037523
-
Molecular characterization of the frst intact Transib transposon from Helicoverpa zea
-
Chen S and Li X. 2008. Molecular characterization of the frst intact Transib transposon from Helicoverpa zea. Gene 408:51-63.
-
(2008)
Gene
, vol.408
, pp. 51-63
-
-
Chen, S.1
Li, X.2
-
24
-
-
33744497802
-
Birth of a chi-meric primate gene by capture of the transposase gene from a mobile element
-
Cordaux R, Udit S, Batzer MA and Feschotte C. 2006. Birth of a chi-meric primate gene by capture of the transposase gene from a mobile element. Proc Natl Acad Sci USA 103:8101-8106.
-
(2006)
Proc Natl Acad Sci USA
, vol.103
, pp. 8101-8106
-
-
Cordaux, R.1
Udit, S.2
Batzer, M.A.3
Feschotte, C.4
-
25
-
-
0001930678
-
-
Tn7 Craig NL, Craigie R, Gellert M and Lambowitz AM, eds Washington, DC: ASM Press
-
Craig NL. 2002. Tn7, pp. 423-456. In: Craig NL, Craigie R, Gellert M and Lambowitz AM, eds, Mobile DNA II, Washington, DC: ASM Press.
-
(2002)
Mobile DNA II
, pp. 423-456
-
-
Craig, N.L.1
-
26
-
-
0035968306
-
HIV integrase, a brief overview from chemistry to therapeutics
-
Craigie R. 2001. HIV integrase, a brief overview from chemistry to therapeutics. J Biol Chem 276:23213-23216.
-
(2001)
J Biol Chem
, vol.276
, pp. 23213-23216
-
-
Craigie, R.1
-
27
-
-
0242636324
-
The outs and ins of transposition: From Mu to Kangaroo
-
Curcio MJ and Derbyshire KM. 2003. The outs and ins of transposition: from Mu to Kangaroo. Nat Rev Mol Cell Biol 4:865-877.
-
(2003)
Nat Rev Mol Cell Biol
, vol.4
, pp. 865-877
-
-
Curcio, M.J.1
Derbyshire, K.M.2
-
28
-
-
0033597135
-
The three-dimensional structure of a Tn5 transposase-related protein determined to 2.9-Å resolution
-
Davies DR, Braam LM, Reznikof WS and Rayment I. 1999. Te three-dimensional structure of a Tn5 transposase-related protein determined to 2.9-Å resolution. J Biol Chem 274:11904-11913.
-
(1999)
J Biol Chem
, vol.274
, pp. 11904-11913
-
-
Davies, D.R.1
Braam, L.M.2
Reznikof, W.S.3
Rayment, I.4
-
29
-
-
0034616993
-
Tree-dimensional structure of the Tn5 synaptic complex transposition intermediate
-
Davies DR, Goryshin IY, Reznikof WS and Rayment I. 2000. Tree-dimensional structure of the Tn5 synaptic complex transposition intermediate. Science 289:77-85.
-
(2000)
Science
, vol.289
, pp. 77-85
-
-
Davies, D.R.1
Goryshin, I.Y.2
Reznikof, W.S.3
Rayment, I.4
-
30
-
-
33751086206
-
SmTRC1, a novel Schistosoma mansoni DNA transposon, discloses new families of animal and fungi transposons belonging to the CACTA superfamily
-
DeMarco R, Venancio TM and Verjovski-Almeida S. 2006. SmTRC1, a novel Schistosoma mansoni DNA transposon, discloses new families of animal and fungi transposons belonging to the CACTA superfamily. BMC Evol Biol 6:89.
-
(2006)
BMC Evol Biol
, vol.6
, pp. 89
-
-
Demarco, R.1
Venancio, T.M.2
Verjovski-Almeida, S.3
-
31
-
-
0023449783
-
Genetic analysis of the interaction of the insertion sequence IS903 transposase with its terminal inverted repeats
-
Derbyshire KM, Hwang L and Grindley ND. 1987. Genetic analysis of the interaction of the insertion sequence IS903 transposase with its terminal inverted repeats. Proc Natl Acad Sci USA 84:8049-8053.
-
(1987)
Proc Natl Acad Sci USA
, vol.84
, pp. 8049-8053
-
-
Derbyshire, K.M.1
Hwang, L.2
Grindley, N.D.3
-
32
-
-
34347375915
-
The protein folding problem: When will it be solved?
-
Dill KA, Ozkan SB, Weikl TR, Chodera JD and Voelz VA. 2007. Te protein folding problem: when will it be solved? Curr Opin Struct Biol 17:342-346.
-
(2007)
Curr Opin Struct Biol
, vol.17
, pp. 342-346
-
-
Dill, K.A.1
Ozkan, S.B.2
Weikl, T.R.3
Chodera, J.D.4
Voelz, V.A.5
-
33
-
-
0028053230
-
A proposed super-family of transposase genes: Transposon-like elements in ciliated protozoa and a common "d35E"motif
-
Doak TG, Doerder FP, Jahn CL and Herrick G. 1994. A proposed super-family of transposase genes: Transposon-like elements in ciliated protozoa and a common "D35E" motif. Proc Natl Acad Sci USA 91:942-946.
-
(1994)
Proc Natl Acad Sci USA
, vol.91
, pp. 942-946
-
-
Doak, T.G.1
Doerder, F.P.2
Jahn, C.L.3
Herrick, G.4
-
34
-
-
22444431606
-
Mammalian mutagenesis using a highly mobile somatic Sleeping Beauty transposon systems
-
Dupuy AJ, Akagi K, Largaespada DA, Copeland NG, and Jenkins NA. 2005. Mammalian mutagenesis using a highly mobile somatic Sleeping Beauty transposon systems. Nature 436:221-226.
-
(2005)
Nature
, vol.436
, pp. 221-226
-
-
Dupuy, A.J.1
Akagi, K.2
Largaespada, D.A.3
Copeland, N.G.4
Jenkins, N.A.5
-
35
-
-
0028584269
-
Crystal structure of the catalytic domain of HIV-1 integrase: Similarity to other polynucleotidyl transferases
-
Dyda F, Hickman AB, Jenkins TM, Engelman A, Craigie R and Davies DR. 1994. Crystal structure of the catalytic domain of HIV-1 integrase: similarity to other polynucleotidyl transferases. Science 266:1981-1986.
-
(1994)
Science
, vol.266
, pp. 1981-1986
-
-
Dyda, F.1
Hickman, A.B.2
Jenkins, T.M.3
Engelman, A.4
Craigie, R.5
Davies, D.R.6
-
36
-
-
0028275403
-
Sequence similarity of putative transposases links the maize Mutator autonomous element and a group of bacterial insertion sequences
-
Eisen JA, Benito M and Walbot V. 1994. Sequence similarity of putative transposases links the maize Mutator autonomous element and a group of bacterial insertion sequences. Nucl Acids Res 22:2634-2636.
-
(1994)
Nucl Acids Res
, vol.22
, pp. 2634-2636
-
-
Eisen, J.A.1
Benito, M.2
Walbot, V.3
-
37
-
-
0025053617
-
Functional similarities between retroviruses and the IS3 family of bacterial insertion sequences?
-
Fayet O, Ramond P, Polard P, Prère MF and Chandler M. 1990. Functional similarities between retroviruses and the IS3 family of bacterial insertion sequences? Mol Microbiol 4:1771-1777.
-
(1990)
Mol Microbiol
, vol.4
, pp. 1771-1777
-
-
Fayet, O.1
Ramond, P.2
Polard, P.3
Prère, M.F.4
Chandler, M.5
-
38
-
-
34548301754
-
In vitro transposition of ISY100, a bacterial insertion sequence belonging to the Tc1/mariner family
-
Feng X and Colloms SD. 2007. In vitro transposition of ISY100, a bacterial insertion sequence belonging to the Tc1/mariner family. Mol Microbiol 65:1432-1443.
-
(2007)
Mol Microbiol
, vol.65
, pp. 1432-1443
-
-
Feng, X.1
Colloms, S.D.2
-
39
-
-
4143085887
-
Merlin, a new superfamily of DNA transposons identifed in diverse animal genomes and related to bacterial IS1016 insertion sequences
-
Feschotte C. 2004. Merlin, a new superfamily of DNA transposons identifed in diverse animal genomes and related to bacterial IS1016 insertion sequences. Mol Biol Evol 21:1769-1780.
-
(2004)
Mol Biol Evol
, vol.21
, pp. 1769-1780
-
-
Feschotte, C.1
-
40
-
-
24644509691
-
Non-mammalian c-integrases are encoded by giant transposable elements
-
Feschotte C and Pritham EJ. 2005. Non-mammalian c-integrases are encoded by giant transposable elements. Trends Genet 21:551-552.
-
(2005)
Trends Genet
, vol.21
, pp. 551-552
-
-
Feschotte, C.1
Pritham, E.J.2
-
41
-
-
37549029474
-
DNA transposons and the evolution of eukaryotic genomes
-
Feschotte C and Pritham EJ. 2007. DNA transposons and the evolution of eukaryotic genomes. Annu Rev Genet 41:331-368.
-
(2007)
Annu Rev Genet
, vol.41
, pp. 331-368
-
-
Feschotte, C.1
Pritham, E.J.2
-
43
-
-
0033584864
-
Stereospecifcity of reactions catalyzed by HIV-1 integrase
-
Gerton JL, Herschlag D and Brown PO. 1999. Stereospecifcity of reactions catalyzed by HIV-1 integrase. J Biol Chem 274: 33480-33487.
-
(1999)
J Biol Chem
, vol.274
, pp. 33480-33487
-
-
Gerton, J.L.1
Herschlag, D.2
Brown, P.O.3
-
44
-
-
0025146246
-
Analysis of a repetitive DNA sequence from Bordetella pertussis and its application to the diagnosis of pertussis using the polymerase chain reaction
-
Glare EM, Paton JC, Premier RR, Lawrence AJ and Nisbet IT. 1990. Analysis of a repetitive DNA sequence from Bordetella pertussis and its application to the diagnosis of pertussis using the polymerase chain reaction. J Clin Microbiol 28: 1982-1987.
-
(1990)
J Clin Microbiol
, vol.28
, pp. 1982-1987
-
-
Glare, E.M.1
Paton, J.C.2
Premier, R.R.3
Lawrence, A.J.4
Nisbet, I.T.5
-
45
-
-
0344012045
-
Cryptons: A group of tyrosine-recombinase-encoding DNA transposons from pathogenic fungi
-
Goodwin TJD, Butler MI and Poulter RTM. 2003. Cryptons: a group of tyrosine-recombinase-encoding DNA transposons from pathogenic fungi. Microbiol 149:3099-3109.
-
(2003)
Microbiol
, vol.149
, pp. 3099-3109
-
-
Goodwin, T.J.D.1
Butler, M.I.2
Poulter, R.T.M.3
-
46
-
-
85158006363
-
The movement of Tn3-like elements: Transposition and cointegrate resolution
-
Craig NL, Craigie R, Gellert M and Lambowitz AM, eds Washington, DC: ASM Press
-
Grindley NDF. 2002. The movement of Tn3-like elements: Transposition and cointegrate resolution, pp. 272-302. In: Craig NL, Craigie R, Gellert M and Lambowitz AM, eds, Mobile DNA II, Washington, DC: ASM Press.
-
(2002)
Mobile DNA II
, pp. 272-302
-
-
Grindley, N.D.F.1
-
49
-
-
67651124919
-
Initial stagaes of V(D) J recombination: Te organization of RAG1/2 and RSS DNA in the postcleavage complex
-
Grundy GJ, Ramón-Maiques S, Dimitriadis EK, Kotova S, Biertümpfel C, Heymann JB, Steven AC, Gellert M and Yang W. 2009. Initial stagaes of V(D)J recombination: Te organization of RAG1/2 and RSS DNA in the postcleavage complex. Mol Cell 35:217-227.
-
(2009)
Mol Cell
, vol.35
, pp. 217-227
-
-
Grundy, G.J.1
Ramón-Maiques, S.2
Dimitriadis, E.K.3
Kotova, S.4
Biertümpfel, C.5
Heymann, J.B.6
Steven, A.C.7
Gellert, M.8
Yang, W.9
-
50
-
-
38949160725
-
In vitro reconstitution of a single-stranded transposition mechanism of IS608
-
Guynet C, Hickman AB, Barabas O, Dyda F, Chandler M and Ton-Hoang B. 2008. In vitro reconstitution of a single-stranded transposition mechanism of IS608. Mol Cell 29:302-312.
-
(2008)
Mol Cell
, vol.29
, pp. 302-312
-
-
Guynet, C.1
Hickman, A.B.2
Barabas, O.3
Dyda, F.4
Chandler, M.5
Ton-Hoang, B.6
-
51
-
-
0034967185
-
Structural and functional characterization of IS679 and IS66-family elements
-
Han CG, Shiga Y, Tobe T, Sasakawa C and Ohtsubo E. 2001. Structural and functional characterization of IS679 and IS66-family elements. J Bacteriol 183:4296-4304.
-
(2001)
J Bacteriol
, vol.183
, pp. 4296-4304
-
-
Han, C.G.1
Shiga, Y.2
Tobe, T.3
Sasakawa, C.4
Ohtsubo, E.5
-
52
-
-
33750848802
-
Transpososome dynamics and regulation in Tn10 transposition
-
Haniford DB. 2006. Transpososome dynamics and regulation in Tn10 transposition. Crit Rev Biochem Mol Biol 41:407-424.
-
(2006)
Crit Rev Biochem Mol Biol
, vol.41
, pp. 407-424
-
-
Haniford, D.B.1
-
53
-
-
70049117341
-
Structural basis for functional tetramerization of lentiviral integrase
-
Hare S, Di Nunzio F, Labeja A, Wang J, Engelman A, and Cherepanov P. 2009. Structural basis for functional tetramerization of lentiviral integrase. PLoS Pathog 5:e1000515.
-
(2009)
PLoS Pathog
, vol.5
-
-
Hare, S.1
Di Nunzio, F.2
Labeja, A.3
Wang, J.4
Engelman, A.5
Cherepanov, P.6
-
54
-
-
0032538273
-
Multiple oli-gomerisation domains in the IS911 transposase: A leucine zipper motif is essential for activity
-
Haren L, Polard P, Ton-Hoang B and Chandler M. 1998. Multiple oli-gomerisation domains in the IS911 transposase: a leucine zipper motif is essential for activity. J Mol Biol 283:29-41.
-
(1998)
J Mol Biol
, vol.283
, pp. 29-41
-
-
Haren, L.1
Polard, P.2
Ton-Hoang, B.3
Chandler, M.4
-
55
-
-
0034711954
-
IS911 transposition is regulated by protein-protein interactions via a leucine zipper motif
-
Haren L, Normand C, Polard P, Alazard R and Chandler M. 2000. IS911 transposition is regulated by protein-protein interactions via a leucine zipper motif. J Mol Biol 296:757-768.
-
(2000)
J Mol Biol
, vol.296
, pp. 757-768
-
-
Haren, L.1
Normand, C.2
Polard, P.3
Alazard, R.4
Chandler, M.5
-
56
-
-
0033634859
-
Unexpected structural diversity in DNA recombination: The restriction endonuclease connection
-
Hickman AB, Li Y, Mathew SV, May EW, Craig NL, and Dyda F. 2000. Unexpected structural diversity in DNA recombination: the restriction endonuclease connection. Mol Cell 5:1025-1034.
-
(2000)
Mol Cell
, vol.5
, pp. 1025-1034
-
-
Hickman, A.B.1
Li, Y.2
Mathew, S.V.3
May, E.W.4
Craig, N.L.5
Dyda, F.6
-
57
-
-
26944453651
-
Molecular architecture of a eukaryotic DNA transposase
-
Hickman AB, Perez ZN, Zhou L, Musingarimi P, Ghirlando R, Hinshaw JE, Craig NL and Dyda F. 2005. Molecular architecture of a eukaryotic DNA transposase. Nat Struct Mol Biol 12:715-721.
-
(2005)
Nat Struct Mol Biol
, vol.12
, pp. 715-721
-
-
Hickman, A.B.1
Perez, Z.N.2
Zhou, L.3
Musingarimi, P.4
Ghirlando, R.5
Hinshaw, J.E.6
Craig, N.L.7
Dyda, F.8
-
59
-
-
0032555758
-
DNA transposition by the RAG1 and RAG2 proteins: A possible source of oncogenic transloca-tions
-
Hiom K, Melek M and Gellert M. 1998. DNA transposition by the RAG1 and RAG2 proteins: a possible source of oncogenic transloca-tions. Cell 94:463-470.
-
(1998)
Cell
, vol.94
, pp. 463-470
-
-
Hiom, K.1
Melek, M.2
Gellert, M.3
-
60
-
-
0026611801
-
A Coxiella burnetii repeated DNA element resembling a bacterial insertion sequence
-
Hoover TA, Vodkin MH and Williams JC. 1992. A Coxiella burnetii repeated DNA element resembling a bacterial insertion sequence. J Bacteriol 174:5540-5548.
-
(1992)
J Bacteriol
, vol.174
, pp. 5540-5548
-
-
Hoover, T.A.1
Vodkin, M.H.2
Williams, J.C.3
-
61
-
-
65349130586
-
Analysis of the DDE motif in the Mutator superfamily
-
Hua-Van A and Capy P. 2008. Analysis of the DDE motif in the Mutator superfamily. J Mol Evol 67:670-681.
-
(2008)
J Mol Evol
, vol.67
, pp. 670-681
-
-
Hua-Van, A.1
Capy, P.2
-
62
-
-
0029895619
-
Identifcation of functional domains and evolution of Tc1-like transposable elements
-
Ivics Z, Izsvák Z, Minter A and Hackett PB. 1996. Identifcation of functional domains and evolution of Tc1-like transposable elements. Proc Natl Acad Sci USA 93:5008-5013.
-
(1996)
Proc Natl Acad Sci USA
, vol.93
, pp. 5008-5013
-
-
Ivics, Z.1
Izsvák, Z.2
Minter, A.3
Hackett, P.B.4
-
63
-
-
0030662074
-
Molecular reconstruction of Sleeping Beauty, a Tc 1-like transposon from fsh, and its transposition in human cells
-
Ivics Z, Hackett PB, Plasterk RH and Izsvák Z. 1997. Molecular reconstruction of Sleeping Beauty, a Tc 1-like transposon from fsh, and its transposition in human cells. Cell 91:501-510.
-
(1997)
Cell
, vol.91
, pp. 501-510
-
-
Ivics, Z.1
Hackett, P.B.2
Plasterk, R.H.3
Izsvák, Z.4
-
64
-
-
66249100555
-
Transposon-mediated genome manipulation in vertebrates
-
Ivics Z, Li MA, Mátés L, Boeke JD, Nagy A, Bradley A and Izsvák Z. 2009. Transposon-mediated genome manipulation in vertebrates. Nature Meth 6:415-422.
-
(2009)
Nature Meth
, vol.6
, pp. 415-422
-
-
Ivics, Z.1
Li, M.A.2
Mátés, L.3
Boeke, J.D.4
Nagy, A.5
Bradley, A.6
Izsvák, Z.7
-
65
-
-
65549105028
-
Piecing together the structure of retroviral integrase, an important target in AIDS therapy
-
Jaskolski M, Alexandratos JN, Bujacz G and Wlodawer A. 2009. Piecing together the structure of retroviral integrase, an important target in AIDS therapy. FEBS J 276:2926-2946.
-
(2009)
FEBS J
, vol.276
, pp. 2926-2946
-
-
Jaskolski, M.1
Alexandratos, J.N.2
Bujacz, G.3
Wlodawer, A.4
-
66
-
-
0030828521
-
Critical contacts between HIV-1 integrase and viral DNA identifed by structure-based analysis and photo-crosslinking
-
Jenkins TM, Esposito D, Engelman A and Craigie R. 1997. Critical contacts between HIV-1 integrase and viral DNA identifed by structure-based analysis and photo-crosslinking. EMBO J 16:6849-6859.
-
(1997)
EMBO J
, vol.16
, pp. 6849-6859
-
-
Jenkins, T.M.1
Esposito, D.2
Engelman, A.3
Craigie, R.4
-
67
-
-
0033578684
-
Protein secondary structure prediction based on posi-tion-specifc scoring matrices
-
Jones D T. 1999. Protein secondary structure prediction based on posi-tion-specifc scoring matrices. J Mol Biol 292:195-202.
-
(1999)
J Mol Biol
, vol.292
, pp. 195-202
-
-
Jones, D.T.1
-
68
-
-
3242879258
-
Te taming of a transposon:V(D)J recombination and the immune system
-
Jones JM and Gellert M. 2004. Te taming of a transposon: V(D) J recombination and the immune system. Immunol Rev 200:233-248.
-
(2004)
Immunol Rev
, vol.200
, pp. 233-248
-
-
Jones, J.M.1
Gellert, M.2
-
69
-
-
23844525077
-
Repbase Update, a database of eukaryotic repetitive elements
-
Jurka J, Kapitonov VV, Pavlicek A, Klonowski P, Kohany O and Walichiewicz J. 2005. Repbase Update, a database of eukaryotic repetitive elements. Cytogenet Genome Res 110:462-467.
-
(2005)
Cytogenet Genome Res
, vol.110
, pp. 462-467
-
-
Jurka, J.1
Kapitonov, V.V.2
Pavlicek, A.3
Klonowski, P.4
Kohany, O.5
Walichiewicz, J.6
-
70
-
-
0033288597
-
Molecular paleontology of transpos-able elements from Arabidopsis thaliana
-
Kapitonov VV and Jurka J. 1999. Molecular paleontology of transpos-able elements from Arabidopsis thaliana. Genetica 107:27-37.
-
(1999)
Genetica
, vol.107
, pp. 27-37
-
-
Kapitonov, V.V.1
Jurka, J.2
-
71
-
-
0035902449
-
Rolling-circle transposons in eukaryo-tes
-
Kapitonov VV and Jurka J. 2001. Rolling-circle transposons in eukaryo-tes. Proc Natl Acad Sci USA 98:8714-8719.
-
(2001)
Proc Natl Acad Sci USA
, vol.98
, pp. 8714-8719
-
-
Kapitonov, V.V.1
Jurka, J.2
-
72
-
-
0037975554
-
Molecular paleontology of transpos-able elements in the Drosophila melanogaster genome
-
Kapitonov VV and Jurka J. 2003. Molecular paleontology of transpos-able elements in the Drosophila melanogaster genome. Proc Natl Acad Sci USA 100:6569-6574.
-
(2003)
Proc Natl Acad Sci USA
, vol.100
, pp. 6569-6574
-
-
Kapitonov, V.V.1
Jurka, J.2
-
73
-
-
2542567200
-
Harbinger transposons and an ancient HARBI1 gene derived from a transposase
-
Kapitonov VV and Jurka J. 2004. Harbinger transposons and an ancient HARBI1 gene derived from a transposase. DNA Cell Biol 23:311-324.
-
(2004)
DNA Cell Biol
, vol.23
, pp. 311-324
-
-
Kapitonov, V.V.1
Jurka, J.2
-
74
-
-
22744445703
-
RAG1 core and V(D) J recombination signal sequences were derived from Transib transposons
-
Kapitonov VV and Jurka J. 2005. RAG1 core and V(D)J recombination signal sequences were derived from Transib transposons. PLoS Biol 3:e181.
-
(2005)
PLoS Biol
, vol.3
-
-
Kapitonov, V.V.1
Jurka, J.2
-
75
-
-
33645227457
-
Self-synthesizing DNA transposons in eukaryotes
-
Kapitonov VV and Jurka J. 2006. Self-synthesizing DNA transposons in eukaryotes. Proc Natl Acad Sci USA 103:4540-4545.
-
(2006)
Proc Natl Acad Sci USA
, vol.103
, pp. 4540-4545
-
-
Kapitonov, V.V.1
Jurka, J.2
-
76
-
-
38449110499
-
To l2: A versatile gene transfer vector in vertebrates
-
Kawakami K. 2007. To l2: a versatile gene transfer vector in vertebrates. Genome Biol 8(Suppl):57.
-
(2007)
Genome Biol
, vol.8
, Issue.SUPPL
, pp. 57
-
-
Kawakami, K.1
-
77
-
-
0034724557
-
Single active site catalysis of the successive phosphoryl transfer steps by DNA transposases: Insights from phosphorothioate stereoselectivity
-
Kennedy AK, Haniford DB and Mizuuchi K. 2000. Single active site catalysis of the successive phosphoryl transfer steps by DNA transposases: insights from phosphorothioate stereoselectivity. Cell 101:295-305.
-
(2000)
Cell
, vol.101
, pp. 295-305
-
-
Kennedy, A.K.1
Haniford, D.B.2
Mizuuchi, K.3
-
78
-
-
0000675571
-
Mutations of acidic residues in RAG1 defne the active site of the V(D) J recombinase
-
Kim DR, Dai Y, Mundy CL, Yang W and Oettinger MA. 1999. Mutations of acidic residues in RAG1 defne the active site of the V(D)J recombinase. Genes Dev 13:3070-3080.
-
(1999)
Genes Dev
, vol.13
, pp. 3070-3080
-
-
Kim, D.R.1
Dai, Y.2
Mundy, C.L.3
Yang, W.4
Oettinger, M.A.5
-
79
-
-
0029844292
-
Transposable element in fsh
-
Koga A, Suzuki M, Inagaki H, Bessho Y and Hori H. 1996. Transposable element in fsh. Nature 383:30.
-
(1996)
Nature
, vol.383
, pp. 30
-
-
Koga, A.1
Suzuki, M.2
Inagaki, H.3
Bessho, Y.4
Hori, H.5
-
80
-
-
68149180869
-
A transposon-based chromosomal engineering method to survey a large cis-regulatory landscape in mice
-
Kokubu C, Horie K, Abe K, Ikeda R, Mizuno S, Uno Y, Ogiwara S, Ohtsuka M, Isotani A, Okabe M, Imai K and Takeda J. 2009. A transposon-based chromosomal engineering method to survey a large cis-regulatory landscape in mice. Nature Genet 41:946-952.
-
(2009)
Nature Genet
, vol.41
, pp. 946-952
-
-
Kokubu, C.1
Horie, K.2
Abe, K.3
Ikeda, R.4
Mizuno, S.5
Uno, Y.6
Ogiwara, S.7
Ohtsuka, M.8
Isotani, A.9
Okabe, M.10
Imai, K.11
Takeda, J.12
-
81
-
-
0027205506
-
Computer-assisted dissection of rolling circle DNA-replication
-
Koonin EV and Ilyina T V. 1993. Computer-assisted dissection of rolling circle DNA-replication. Biosyst 30:241-268.
-
(1993)
Biosyst
, vol.30
, pp. 241-268
-
-
Koonin, E.V.1
Ilyina, T.V.2
-
83
-
-
0026719238
-
Residues critical for retroviral integrative recombination in a region that is highly conserved among retroviral/retrotransposon integrases and bacterial insertion sequence transposases
-
Kulkosky J, Jones KS, Katz RA, Mack JP and Skalka AM. 1992. Residues critical for retroviral integrative recombination in a region that is highly conserved among retroviral/retrotransposon integrases and bacterial insertion sequence transposases. Mol Cell Biol 12:2331-2338.
-
(1992)
Mol Cell Biol
, vol.12
, pp. 2331-2338
-
-
Kulkosky, J.1
Jones, K.S.2
Katz, R.A.3
MacK, J.P.4
Skalka, A.M.5
-
84
-
-
0033380368
-
Mutational analysis of RAG1 and RAG2 identifes three catalytic amino acids in RAG1 critical for both cleavage steps of V(D) J recombination
-
Landree MA, Wibbenmeyer JA and Roth DB. 1999. Mutational analysis of RAG1 and RAG2 identifes three catalytic amino acids in RAG1 critical for both cleavage steps of V(D)J recombination. Genes Dev 13:3059-3069.
-
(1999)
Genes Dev
, vol.13
, pp. 3059-3069
-
-
Landree, M.A.1
Wibbenmeyer, J.A.2
Roth, D.B.3
-
85
-
-
0029831104
-
The Drosophila P-element KP repressor protein dimerizes and interacts with multiple sites on P-element DNA
-
Lee CC, Mul YM and Rio DC. 1996. The Drosophila P-element KP repressor protein dimerizes and interacts with multiple sites on P-element DNA. Mol Cell Biol 16:5616-5622.
-
(1996)
Mol Cell Biol
, vol.16
, pp. 5616-5622
-
-
Lee, C.C.1
Mul, Y.M.2
Rio, D.C.3
-
87
-
-
38549144166
-
Te Genomes on Line Database (GOLD) in 2007: Status of genomic and metagenomic projects and their associated metadata
-
Liolios K, Mavromatis K, Tavernarakis N and Kyrpides NC. 2008. Te Genomes On Line Database (GOLD) in 2007: status of genomic and metagenomic projects and their associated metadata. Nucleic Acids Res 36:D475-D479.
-
(2008)
Nucleic Acids Res
, vol.36
-
-
Liolios, K.1
Mavromatis, K.2
Tavernarakis, N.3
Kyrpides, N.C.4
-
88
-
-
33846627783
-
The human SETMAR protein preserves most of the activities of the ancestral Hsmar1 transposase
-
Liu D, Bischerour J, Siddique A, Buisine N, Bigot Y, and Chalmers R. 2007. The human SETMAR protein preserves most of the activities of the ancestral Hsmar1 transposase. Mol Cell Biol 27:1125-1132.
-
(2007)
Mol Cell Biol
, vol.27
, pp. 1125-1132
-
-
Liu, D.1
Bischerour, J.2
Siddique, A.3
Buisine, N.4
Bigot, Y.5
Chalmers, R.6
-
89
-
-
67649887151
-
PGenTHREADER and pDomTHREADER: New methods for improved protein fold recognition and superfamily discrimination
-
Lobley A, Sadowski MI and Jones DT. 2009. pGenTHREADER and pDomTHREADER: new methods for improved protein fold recognition and superfamily discrimination. Bioinform 25:1761-1767.
-
(2009)
Bioinform
, vol.25
, pp. 1761-1767
-
-
Lobley, A.1
Sadowski, M.I.2
Jones, D.T.3
-
90
-
-
33750597285
-
Amino acid residues in Rag1 crucial for DNA hairpin formation
-
Lu CP, Sandoval H, Brandt VL, Rice PA and Roth DB. 2006. Amino acid residues in Rag1 crucial for DNA hairpin formation. Nat Struct Mol Biol 13:1010-1015.
-
(2006)
Nat Struct Mol Biol
, vol.13
, pp. 1010-1015
-
-
Lu, C.P.1
Sandoval, H.2
Brandt, V.L.3
Rice, P.A.4
Roth, D.B.5
-
92
-
-
0025326948
-
Transposition of an antibiotic resistance element in myco-bacteria
-
Martin C, Timm J, Rauzier J, Gomez-Lus R, Davies J and Gicquel B. 1990. Transposition of an antibiotic resistance element in myco-bacteria. Nature 345:739-743.
-
(1990)
Nature
, vol.345
, pp. 739-743
-
-
Martin, C.1
Timm, J.2
Rauzier, J.3
Gomez-Lus, R.4
Davies, J.5
Gicquel, B.6
-
93
-
-
58149203237
-
CDD: Specifc functional annotation with the Conserved Domain Database
-
Marchler-Bauer A, Anderson JB, Chitsaz F, Derbyshire MK, DeWeese-Scott C, Fong JH, Geer LY, Geer RC, Gonzales NR, Gwadz M, He S, Hurwitz DI, Jackson JD, Ke Z, Lanczycki CJ, Liebert CA, Liu C, Lu F, Lu S, Marchler GH, Mullokandov M, Song JS, Tasneem A, Tanki N, Yamashita RA, Zhang D, Zhang N and Bryant SH. 2009. CDD: specifc functional annotation with the Conserved Domain Database. Nucl Acids Res 37:D205-D210.
-
(2009)
Nucl Acids Res
, vol.37
-
-
Marchler-Bauer, A.1
Anderson, J.B.2
Chitsaz, F.3
Derbyshire, M.K.4
Deweese-Scott, C.5
Fong, J.H.6
Geer, L.Y.7
Geer, R.C.8
Gonzales, N.R.9
Gwadz, M.10
He, S.11
Hurwitz, D.I.12
Jackson, J.D.13
Ke, Z.14
Lanczycki, C.J.15
Liebert, C.A.16
Liu, C.17
Lu, F.18
Lu, S.19
Marchler, G.H.20
Mullokandov, M.21
Song, J.S.22
Tasneem, A.23
Tanki, N.24
Yamashita, R.A.25
Zhang, D.26
Zhang, N.27
Bryant, S.H.28
more..
-
94
-
-
0025878592
-
Characterization of two insertion sequences, IS701 and IS702, from the cyanobacterium Calothrix species PCC 7601
-
Mazel D, Bernard C, Schwarz R, Castets AM, Houmard J and Tandeau de Marsac N. 1991. Characterization of two insertion sequences, IS701 and IS702, from the cyanobacterium Calothrix species PCC 7601. Mol Microbiol 5:2165-2170.
-
(1991)
Mol Microbiol
, vol.5
, pp. 2165-2170
-
-
Mazel, D.1
Bernard, C.2
Schwarz, R.3
Castets, A.M.4
Houmard, J.5
Tandeau De Marsac, N.6
-
95
-
-
0026015009
-
Molecular and functional analysis of the mariner mutator element Mos1 in Drosophila
-
Medhora M, Marayuma K and Hartl DL. 1991. Molecular and functional analysis of the mariner mutator element Mos1 in Drosophila. Genet 128:311-318.
-
(1991)
Genet
, vol.128
, pp. 311-318
-
-
Medhora, M.1
Marayuma, K.2
Hartl, D.L.3
-
96
-
-
0028199682
-
Diferential roles of the transposon termini in IS91 transposition
-
Mendiola MV, Bernales I and de la Cruz F. 1994. Diferential roles of the transposon termini in IS91 transposition. Proc Natl Acad Sci USA 91:1922-1926.
-
(1994)
Proc Natl Acad Sci USA
, vol.91
, pp. 1922-1926
-
-
Mendiola, M.V.1
Bernales, I.2
De La Cruz, F.3
-
97
-
-
65449189123
-
Structural basis for HIV-1 DNA integration in the human genome, role of the LEDGF/P75 cofactor
-
Michel F, Crucifx C, Granger F, Eiler S, Mouscadet J F, Korolev S, Agapkina J, Ziganshin R, Gottikh M, Nazabal A, Emiliani S, Benarous R, Moras D, Schultz P and Ruf M. 2009. Structural basis for HIV-1 DNA integration in the human genome, role of the LEDGF/P75 cofactor. EMBO J 28:980-991.
-
(2009)
EMBO J
, vol.28
, pp. 980-991
-
-
Michel, F.1
Crucifx, C.2
Granger, F.3
Eiler, S.4
Mouscadet, J.F.5
Korolev, S.6
Agapkina, J.7
Ziganshin, R.8
Gottikh, M.9
Nazabal, A.10
Emiliani, S.11
Benarous, R.12
Moras, D.13
Schultz, P.14
Ruf, M.15
-
98
-
-
0037145521
-
Does the proposed DSE motif form the active center in the Hermes transposase?
-
Michel K, O'Brochta DA and Atkinson PW. 2002. Does the proposed DSE motif form the active center in the Hermes transposase? Gene 298:141-146.
-
(2002)
Gene
, vol.298
, pp. 141-146
-
-
Michel, K.1
O'Brochta, D.A.2
Atkinson, P.W.3
-
99
-
-
0141958834
-
The C-terminus of the Hermes transposase contains a protein multimerization domain
-
Michel K, O'Brochta DA and Atkinson PW. 2003. The C-terminus of the Hermes transposase contains a protein multimerization domain. Insect Biochem Mol Biol 33:959-970.
-
(2003)
Insect Biochem Mol Biol
, vol.33
, pp. 959-970
-
-
Michel, K.1
O'Brochta, D.A.2
Atkinson, P.W.3
-
100
-
-
34250216420
-
The ancient mariner sails again: Transposition of the human Hsmar1 element by a reconstructed transposase and activities of the SETMAR protein on transposon ends
-
Miskey C, Papp B, Mátés L, Sinzelle L, Keller H, Izsvák Z and Ivics Z. 2007. The ancient mariner sails again: Transposition of the human Hsmar1 element by a reconstructed transposase and activities of the SETMAR protein on transposon ends. Mol Cell Biol 27:4589-4600.
-
(2007)
Mol Cell Biol
, vol.27
, pp. 4589-4600
-
-
Miskey, C.1
Papp, B.2
Mátés, L.3
Sinzelle, L.4
Keller, H.5
Izsvák, Z.6
Ivics, Z.7
-
101
-
-
41949108098
-
PiggyBac can bypass DNA synthesis during cut and paste transposition
-
Mitra R, Fain-Tornton J, and Craig NL. 2008. piggyBac can bypass DNA synthesis during cut and paste transposition. EMBO J 27:1097-1109.
-
(2008)
EMBO J
, vol.27
, pp. 1097-1109
-
-
Mitra, R.1
Fain-Tornton, J.2
Craig, N.L.3
-
102
-
-
0035837378
-
Mobilization of transposons by a mutation abolishing full DNA methylation in Arabidopsis
-
Miura A, Yonebayashi S, Watanabe K, Toyama T, Shimada H and Kakutani T. 2001. Mobilization of transposons by a mutation abolishing full DNA methylation in Arabidopsis. Nature 411:212-214.
-
(2001)
Nature
, vol.411
, pp. 212-214
-
-
Miura, A.1
Yonebayashi, S.2
Watanabe, K.3
Toyama, T.4
Shimada, H.5
Kakutani, T.6
-
103
-
-
0026637325
-
Transpositional recombination: Mechanistic insights from studies of Mu and other elements
-
Mizuuchi K. 1992. Transpositional recombination: Mechanistic insights from studies of Mu and other elements. Annu Rev Biochem 61:1011-1051.
-
(1992)
Annu Rev Biochem
, vol.61
, pp. 1011-1051
-
-
Mizuuchi, K.1
-
104
-
-
0030628279
-
Polynucleotidyl transfer reactions in site-specifc DNA recombination
-
Mizuuchi K. 1997. Polynucleotidyl transfer reactions in site-specifc DNA recombination. Genes Cell 2:1-12.
-
(1997)
Genes Cell
, vol.2
, pp. 1-12
-
-
Mizuuchi, K.1
-
105
-
-
0025899314
-
Inversion of the phosphate chirality at the target sites of Mu DNA strand transfer: Evidence for a one step transesterifcation mechanism
-
Mizuuchi K and Adzuma K. 1991. Inversion of the phosphate chirality at the target sites of Mu DNA strand transfer: evidence for a one step transesterifcation mechanism. Cell 66:129-140.
-
(1991)
Cell
, vol.66
, pp. 129-140
-
-
Mizuuchi, K.1
Adzuma, K.2
-
106
-
-
85158061254
-
Chemical mechanisms for mobilizing DNA
-
Craig NL, Craigie R, Gellert M and Lambowitz AM, eds Washington, DC: ASM Press
-
Mizuuchi K and Baker TA. 2002. Chemical mechanisms for mobilizing DNA, pp. 12-23. In: Craig NL, Craigie R, Gellert M and Lambowitz AM, eds, Mobile DNA II, Washington, DC: ASM Press.
-
(2002)
Mobile DNA II
, pp. 12-23
-
-
Mizuuchi, K.1
Baker, T.A.2
-
107
-
-
59649101866
-
Retroviral integrase superfamily: The structural perspective
-
Nowotny M. 2009. Retroviral integrase superfamily: the structural perspective. EMBO Rep 10:144-151.
-
(2009)
EMBO Rep
, vol.10
, pp. 144-151
-
-
Nowotny, M.1
-
108
-
-
21244451435
-
Crystal structures of RNase H bound to an RNA/DNA hybrid: Substrate specifcity and metal-dependent catalysis
-
Nowotny M, Gaidamakov SA, Crouch RJ and Yang W. 2005. Crystal structures of RNase H bound to an RNA/DNA hybrid: Substrate specifcity and metal-dependent catalysis. Cell 121:1005-1016.
-
(2005)
Cell
, vol.121
, pp. 1005-1016
-
-
Nowotny, M.1
Gaidamakov, S.A.2
Crouch, R.J.3
Yang, W.4
-
109
-
-
0019422896
-
Distribution of the insertion sequence IS1 in Gram-negative bacteria
-
Nyman K, Nakamura K, Ohtsubo H and Ohtsubo E. 1981. Distribution of the insertion sequence IS1 in Gram-negative bacteria. Nature 289:609-612.
-
(1981)
Nature
, vol.289
, pp. 609-612
-
-
Nyman, K.1
Nakamura, K.2
Ohtsubo, H.3
Ohtsubo, E.4
-
110
-
-
0036843635
-
Presence of a characteristic D-D-E motif in IS1 transposase
-
Ohta S, Tsuchida K, Choi S, Sekine Y, Shiga Y and Ohtsubo E. 2002. Presence of a characteristic D-D-E motif in IS1 transposase. J Bacteriol 184:6146-6154.
-
(2002)
J Bacteriol
, vol.184
, pp. 6146-6154
-
-
Ohta, S.1
Tsuchida, K.2
Choi, S.3
Sekine, Y.4
Shiga, Y.5
Ohtsubo, E.6
-
111
-
-
3142512684
-
Involvement of two domains with helix-turn-helix and zinc fnger motifs in the binding of IS1 transposase to terminal inverted repeats
-
Ohta S, Yoshimura E and Ohtsubo E. 2004. Involvement of two domains with helix-turn-helix and zinc fnger motifs in the binding of IS1 transposase to terminal inverted repeats. Mol Microbiol 53:193-202.
-
(2004)
Mol Microbiol
, vol.53
, pp. 193-202
-
-
Ohta, S.1
Yoshimura, E.2
Ohtsubo, E.3
-
112
-
-
41149163571
-
Molluscan mobile elements similar to the vertebrate Recombination- Activating Genes
-
Panchin Y and Moroz LL. 2008. Molluscan mobile elements similar to the vertebrate Recombination-Activating Genes. Biochem Biophys Res Commun 369:818-823.
-
(2008)
Biochem Biophys Res Commun
, vol.369
, pp. 818-823
-
-
Panchin, Y.1
Moroz, L.L.2
-
113
-
-
56449107747
-
Tn7 elements: Engendering diversity from chromosomes to episomes
-
Parks AR and Peters JE. 2009. Tn7 elements: Engendering diversity from chromosomes to episomes. Plasmid 61:1-14.
-
(2009)
Plasmid
, vol.61
, pp. 1-14
-
-
Parks, A.R.1
Peters, J.E.2
-
114
-
-
0032816640
-
Excision of IS492 requires fanking target sequences and results in circle formation in Pseudoalteromonas atlantica
-
Perkins-Balding D, Duval-Valentin G and Glasgow AC. 1999. Excision of IS492 requires fanking target sequences and results in circle formation in Pseudoalteromonas atlantica. J Bacteriol 181:4937-4948.
-
(1999)
J Bacteriol
, vol.181
, pp. 4937-4948
-
-
Perkins-Balding, D.1
Duval-Valentin, G.2
Glasgow, A.C.3
-
115
-
-
0033179759
-
Resident aliens: The Tc1/mariner superfamily of transposable elements
-
Plasterk RHA, Izsvák Z and Ivics Z. 1999. Resident aliens: the Tc1/mariner superfamily of transposable elements. Trends Genet 15:326-332.
-
(1999)
Trends Genet
, vol.15
, pp. 326-332
-
-
Plasterk, R.H.A.1
Izsvák, Z.2
Ivics, Z.3
-
116
-
-
0028928168
-
Bacterial transposases and retroviral integrases
-
Polard P and Chandler M. 1995. Bacterial transposases and retroviral integrases. Mol Microbiol 15:13-23.
-
(1995)
Mol Microbiol
, vol.15
, pp. 13-23
-
-
Polard, P.1
Chandler, M.2
-
117
-
-
23844559179
-
DIRS-1 and the other tyro-sine recombinase retrotransposons
-
Poulter RTM and Goodwin TJD. 2005. DIRS-1 and the other tyro-sine recombinase retrotransposons. Cytogenet Genome Res 110:575-588.
-
(2005)
Cytogenet Genome Res
, vol.110
, pp. 575-588
-
-
Poulter, R.T.M.1
Goodwin, T.J.D.2
-
118
-
-
33846939973
-
Mavericks, a novel class of giant transposable elements widespread in eukaryotes and related to DNA viruses
-
Pritham EJ, Putliwala T and Feschotte C. 2007. Mavericks, a novel class of giant transposable elements widespread in eukaryotes and related to DNA viruses. Gene 390:3-17.
-
(2007)
Gene
, vol.390
, pp. 3-17
-
-
Pritham, E.J.1
Putliwala, T.2
Feschotte, C.3
-
119
-
-
0036134916
-
Diversity of Tn4001 transposition products: The fanking IS256 elements can form tandem dimers and IS circles
-
Prudhomme M, Turlan C, Claverys JP and Chandler M. 2002. Diversity of Tn4001 transposition products: the fanking IS256 elements can form tandem dimers and IS circles. J Bacteriol 184:433-443.
-
(2002)
J Bacteriol
, vol.184
, pp. 433-443
-
-
Prudhomme, M.1
Turlan, C.2
Claverys, J.P.3
Chandler, M.4
-
121
-
-
33846272678
-
Single-particle image reconstruction of a tetramer of HIV integrase bound to DNA
-
Ren G, Gao K, Bushman FD and Yeager M. 2007. Single-particle image reconstruction of a tetramer of HIV integrase bound to DNA. J Mol Biol 366:286-294.
-
(2007)
J Mol Biol
, vol.366
, pp. 286-294
-
-
Ren, G.1
Gao, K.2
Bushman, F.D.3
Yeager, M.4
-
122
-
-
58549097483
-
Transposon Tn5
-
Reznikof WS. 2008. Transposon Tn5. Annu Rev Genet 42:269-286.
-
(2008)
Annu Rev Genet
, vol.42
, pp. 269-286
-
-
Reznikof, W.S.1
-
123
-
-
0027517782
-
The IS4 family of insertion sequences: Evidence for a conserved transposase motif
-
Rezsöhazy R, Hallet B, Delcour J and Mahillon J. 1993. The IS4 family of insertion sequences: evidence for a conserved transposase motif. Mol Microbiol 9:1283-1295.
-
(1993)
Mol Microbiol
, vol.9
, pp. 1283-1295
-
-
Rezsöhazy, R.1
Hallet, B.2
Delcour, J.3
Mahillon, J.4
-
124
-
-
17044372022
-
Visualizing Mu transposition: Assembling the puzzle pieces
-
Rice PA. 2005. Visualizing Mu transposition: assembling the puzzle pieces. Genes Dev 19:773-775.
-
(2005)
Genes Dev
, vol.19
, pp. 773-775
-
-
Rice, P.A.1
-
125
-
-
0029129435
-
Structure of the bacteriophage Mu trans-posase core: A common structural motif for DNA transposition and retroviral integration
-
Rice P and Mizuuchi K. 1995. Structure of the bacteriophage Mu trans-posase core: a common structural motif for DNA transposition and retroviral integration. Cell 82:209-220.
-
(1995)
Cell
, vol.82
, pp. 209-220
-
-
Rice, P.1
Mizuuchi, K.2
-
126
-
-
33645305136
-
Mechanism of Mos1 transposition: Insights from structural analysis
-
Richardson JM, Dawson A, O'Hagan N, Taylor P, Finnegan DJ and Walkinshaw MD. 2006. Mechanism of Mos1 transposition: insights from structural analysis. EMBO J 25: 1324-1334.
-
(2006)
EMBO J
, vol.25
, pp. 1324-1334
-
-
Richardson, J.M.1
Dawson, A.2
O'Hagan, N.3
Taylor, P.4
Finnegan, D.J.5
Walkinshaw, M.D.6
-
127
-
-
70149109999
-
Molecular architecture of the Mos1 paired-end complex: The structural basis of DNA transposition in a eukaryote
-
Richardson JM, Colloms SD, Finnegan DJ and Walkinshaw MD. 2009. Molecular architecture of the Mos1 paired-end complex: the structural basis of DNA transposition in a eukaryote. Cell 138:1096-1108.
-
(2009)
Cell
, vol.138
, pp. 1096-1108
-
-
Richardson, J.M.1
Colloms, S.D.2
Finnegan, D.J.3
Walkinshaw, M.D.4
-
128
-
-
77249118003
-
-
Craig NL, Craigie R, Gellert M and Lambowitz AM, eds, Mobile DNA II, Washington, DC: ASM Press
-
Rio DC. 2002. Drosophila P Elements, pp. 484-518. In: Craig NL, Craigie R, Gellert M and Lambowitz AM, eds, Mobile DNA II, Washington, DC: ASM Press.
-
(2002)
Drosophila P Elements
, pp. 484-518
-
-
Rio, D.C.1
-
129
-
-
0031593204
-
Molecular evolution of an ancient mariner transposon, Hsmar1, in the human genome
-
Robertson HM and Zumpano KL. 1997. Molecular evolution of an ancient mariner transposon, Hsmar1, in the human genome. Gene 205:203-217.
-
(1997)
Gene
, vol.205
, pp. 203-217
-
-
Robertson, H.M.1
Zumpano, K.L.2
-
130
-
-
0030570467
-
A zinc-binding domain involved in the dimeri-zation of RAG1
-
Rodgers KK, Bu Z, Fleming KG, Schatz DG, Engelman DM and Coleman JE. 1996. A zinc-binding domain involved in the dimeri-zation of RAG1. J Mol Biol 260:70-84.
-
(1996)
J Mol Biol
, vol.260
, pp. 70-84
-
-
Rodgers, K.K.1
Bu, Z.2
Fleming, K.G.3
Schatz, D.G.4
Engelman, D.M.5
Coleman, J.E.6
-
131
-
-
4243123147
-
Te carboxy-terminal portion of TnsC activates the Tn7 transposase through a specifc interaction with TnsA
-
Ronning DR, Li Y, Perez ZN, Ross PD, Hickman AB, Craig NL and Dyda F. 2004. Te carboxy-terminal portion of TnsC activates the Tn7 transposase through a specifc interaction with TnsA. EMBO J 23:2972-2981.
-
(2004)
EMBO J
, vol.23
, pp. 2972-2981
-
-
Ronning, D.R.1
Li, Y.2
Perez, Z.N.3
Ross, P.D.4
Hickman, A.B.5
Craig, N.L.6
Dyda, F.7
-
132
-
-
85158022412
-
Transposition of IS911
-
Craig NL, Craigie R, Gellert M and Lambowitz AM, eds Washington, DC: ASM Press
-
Rousseau P, Normand C, Loot C, Turlan C, Alazard R, Duval-Valentin G and Chandler M. 2002. Transposition of IS911, pp. 367-383. In: Craig NL, Craigie R, Gellert M and Lambowitz AM, eds, Mobile DNA II, Washington, DC: ASM Press.
-
(2002)
Mobile DNA II
, pp. 367-383
-
-
Rousseau, P.1
Normand, C.2
Loot, C.3
Turlan, C.4
Alazard, R.5
Duval-Valentin, G.6
Chandler, M.7
-
133
-
-
0034913514
-
Structure and evolution of the hAT transposon superfamily
-
Rubin E, Lithwick G and Levy AA. 2001. Structure and evolution of the hAT transposon superfamily. Genet 158:949-957.
-
(2001)
Genet
, vol.158
, pp. 949-957
-
-
Rubin, E.1
Lithwick, G.2
Levy, A.A.3
-
134
-
-
0018627375
-
Sequences at the somatic recombination sites of immunoglobulin light-chain genes
-
Sakano H, Huppi K, Heinrich G and Tonegawa S. 1979. Sequences at the somatic recombination sites of immunoglobulin light-chain genes. Nature 280:288-294.
-
(1979)
Nature
, vol.280
, pp. 288-294
-
-
Sakano, H.1
Huppi, K.2
Heinrich, G.3
Tonegawa, S.4
-
135
-
-
0344442909
-
Molecular evolutionary analysis of the widespread piggyBac transposon family and related "domesticated"sequences
-
Sarkar A, Sim C, Hong YS, Hogan JR, Fraser MJ, Robertson HM and Collins FH. 2003. Molecular evolutionary analysis of the widespread piggyBac transposon family and related "domesticated" sequences. Mol Gen Genomics 270:173-180.
-
(2003)
Mol Gen Genomics
, vol.270
, pp. 173-180
-
-
Sarkar, A.1
Sim, C.2
Hong, Y.S.3
Hogan, J.R.4
Fraser, M.J.5
Robertson, H.M.6
Collins, F.H.7
-
136
-
-
0029858349
-
The Tn7 transposase is a heteromeric complex in which DNA breakage and joining activities are distributed between diferent gene products
-
Sarnovsky RJ, May EW and Craig NL. 1996. Te Tn7 transposase is a heteromeric complex in which DNA breakage and joining activities are distributed between diferent gene products. EMBO J 15:6348-6361.
-
(1996)
EMBO J
, vol.15
, pp. 6348-6361
-
-
Sarnovsky, R.J.1
May, E.W.2
Craig, N.L.3
-
137
-
-
0343250277
-
Molecular model for the transposition and replication of bacteriophage Mu and other transposable elements
-
Shapiro JA. 1979. Molecular model for the transposition and replication of bacteriophage Mu and other transposable elements. Proc Natl Acad Sci USA 76:1933-1937.
-
(1979)
Proc Natl Acad Sci USA
, vol.76
, pp. 1933-1937
-
-
Shapiro, J.A.1
-
139
-
-
67349260702
-
The new IS1595 family, its relation to IS1 and the frontier between insertion sequences and transposons
-
Siguier P, Gagnevin L and Chandler M. 2009. The new IS1595 family, its relation to IS1 and the frontier between insertion sequences and transposons. Res Microbiol 160:232-241.
-
(2009)
Res Microbiol
, vol.160
, pp. 232-241
-
-
Siguier, P.1
Gagnevin, L.2
Chandler, M.3
-
140
-
-
42449164337
-
Transposition of a reconstructed Harbinger element in human cells and functional homology with two transposon-derived cellular genes 2008
-
Sinzelle L, Kapitonov VV, Grzela DP, Jursch T, Jurka J, Izsvák Z and Ivics Z. 2008. Transposition of a reconstructed Harbinger element in human cells and functional homology with two transposon-derived cellular genes. 2008. Proc Natl Acad Sci USA 105:4715-4720.
-
(2008)
Proc Natl Acad Sci USA
, vol.105
, pp. 4715-4720
-
-
Sinzelle, L.1
Kapitonov, V.V.2
Grzela, D.P.3
Jursch, T.4
Jurka, J.5
Izsvák, Z.6
Ivics, Z.7
-
141
-
-
0036405064
-
Evidence for "unseen" transposase-DNA contacts
-
Steiniger-White M, Bhasin A, Lovell S, Rayment I, and Reznikof WS. 2002. Evidence for "unseen" transposase-DNA contacts. J Mol Biol 322:971-982.
-
(2002)
J Mol Biol
, vol.322
, pp. 971-982
-
-
Steiniger-White, M.1
Bhasin, A.2
Lovell, S.3
Rayment, I.4
Reznikof, W.S.5
-
143
-
-
33646594074
-
High-throughput transposon mutagenesis of Corynebacterium glutamicum and construction of a single-gene disruptant mutant library
-
Suzuki N, Okai N, Nonaka H, Tsuge Y, Inui M and Yukawa H. 2006. High-throughput transposon mutagenesis of Corynebacterium glutamicum and construction of a single-gene disruptant mutant library. Appl Environ Microbiol 72:3750-3755.
-
(2006)
Appl Environ Microbiol
, vol.72
, pp. 3750-3755
-
-
Suzuki, N.1
Okai, N.2
Nonaka, H.3
Tsuge, Y.4
Inui, M.5
Yukawa, H.6
-
144
-
-
0034973189
-
Identifcation and distribution of new insertion sequences in the genome of alka-liphilic Bacillus halodurans C-125
-
Takami H, Han CG, Takaki Y and Ohtsubo E. 2001. Identifcation and distribution of new insertion sequences in the genome of alka-liphilic Bacillus halodurans C-125. J Bacteriol 183:4345-4356.
-
(2001)
J Bacteriol
, vol.183
, pp. 4345-4356
-
-
Takami, H.1
Han, C.G.2
Takaki, Y.3
Ohtsubo, E.4
-
145
-
-
0025885529
-
Novel insertion sequence IS1380 from Acetobacter pasteurianus is involved in loss of ethanol-oxidizing ability
-
Takemura H, Horinouchi S and Beppu T. 1991. Novel insertion sequence IS1380 from Acetobacter pasteurianus is involved in loss of ethanol-oxidizing ability. J Bacteriol 173:7070-7076.
-
(1991)
J Bacteriol
, vol.173
, pp. 7070-7076
-
-
Takemura, H.1
Horinouchi, S.2
Beppu, T.3
-
146
-
-
35348973425
-
Analysis of P element transposase protein-DNA interactions during the early stages of transposition
-
Tang M, Cecconi C, Bustamante C and Rio DC. 2007. Analysis of P element transposase protein-DNA interactions during the early stages of transposition. J Biol Chem 282:29002-29012.
-
(2007)
J Biol Chem
, vol.282
, pp. 29002-29012
-
-
Tang, M.1
Cecconi, C.2
Bustamante, C.3
Rio, D.C.4
-
147
-
-
0031565988
-
Defning functional regions of the IS903 transposase
-
Tavakoli NP, DeVost J and Derbyshire KM. 1997. Defning functional regions of the IS903 transposase. J Mol Biol 274:491-504.
-
(1997)
J Mol Biol
, vol.274
, pp. 491-504
-
-
Tavakoli, N.P.1
Devost, J.2
Derbyshire, K.M.3
-
148
-
-
4444315845
-
Functional domains of the IS1 transposase: Analysis in vivo and in vitro
-
Ton-Hoang B, Turlan C and Chandler M. 2004. Functional domains of the IS1 transposase: analysis in vivo and in vitro. Mol Microbiol 53:1529-1543.
-
(2004)
Mol Microbiol
, vol.53
, pp. 1529-1543
-
-
Ton-Hoang, B.1
Turlan, C.2
Chandler, M.3
-
149
-
-
0034213049
-
Playing second fddle: Second-strand processing and liberation of transposable elements from donor DNA
-
Turlan C and Chandler M. 2000. Playing second fddle: second-strand processing and liberation of transposable elements from donor DNA. Trends Microbiol 8:268-274.
-
(2000)
Trends Microbiol
, vol.8
, pp. 268-274
-
-
Turlan, C.1
Chandler, M.2
-
150
-
-
0029967722
-
Similarities between initiation of V(D)J recombination and retroviral integration
-
van Gent DC, Mizuuchi K and Gellert M. 1996. Similarities between initiation of V(D)J recombination and retroviral integration. Science 271:1592-1594. (Pubitemid 26097219)
-
(1996)
Science
, vol.271
, Issue.5255
, pp. 1592-1594
-
-
Van Gent, D.C.1
Mizuuchi, K.2
Gellert, M.3
-
151
-
-
0030779907
-
Crystal structure of the specifc DNA-binding domain of Tc3 transposase of C.elegans in complex with transposon DNA
-
van Pouderoyen G, Ketting RF, Perrakis A, Plasterk RHA and Sixma TK. 1997. Crystal structure of the specifc DNA-binding domain of Tc3 transposase of C.elegans in complex with transposon DNA. EMBO J 16:6044-6054.
-
(1997)
EMBO J
, vol.16
, pp. 6044-6054
-
-
Van Pouderoyen, G.1
Ketting, R.F.2
Perrakis, A.3
Plasterk, R.H.A.4
Sixma, T.K.5
-
152
-
-
0033028108
-
IS1634, a novel insertion element creating long, variable-length direct repeats which is specifc for Mycoplasma mycoides subsp. mycoides small-colony type
-
Vilei EM, Nicolet J and Frey J. 1999. IS1634, a novel insertion element creating long, variable-length direct repeats which is specifc for Mycoplasma mycoides subsp. mycoides small-colony type. J Bacteriol 181:1319-1323.
-
(1999)
J Bacteriol
, vol.181
, pp. 1319-1323
-
-
Vilei, E.M.1
Nicolet, J.2
Frey, J.3
-
153
-
-
0028063082
-
The Hermes trans-posable element from the house fy, Musca domestica, is a short inverted repeat-type element of the hobo, Ac, and Tam3 (hAT) element family
-
Warren WD, Atkinson PW and O'Brochta DA. 1994. The Hermes trans-posable element from the house fy, Musca domestica, is a short inverted repeat-type element of the hobo, Ac, and Tam3 (hAT) element family. Genet Res 64:87-97.
-
(1994)
Genet Res
, vol.64
, pp. 87-97
-
-
Warren, W.D.1
Atkinson, P.W.2
O'Brochta, D.A.3
-
154
-
-
4043107881
-
Structural analysis of the bipartite DNA-binding domain of Tc3 transposase bound to transposon DNA
-
Watkins S, van Pouderoyen G and Sixma TK. 2004. Structural analysis of the bipartite DNA-binding domain of Tc3 transposase bound to transposon DNA. Nucleic Acids Res 32:4306-4312.
-
(2004)
Nucleic Acids Res
, vol.32
, pp. 4306-4312
-
-
Watkins, S.1
Van Pouderoyen, G.2
Sixma, T.K.3
-
155
-
-
36249023071
-
A unifed classifcation system for eukaryotic transposable elements
-
Wicker T, Sabot F, Hua-Van A, Bennetzen JL, Capy P, Chalhoub B, Flavell A, Leroy P, Morgante M, Panaud O, Paux E, SanMiguel P and Schulman AH. 2007. A unifed classifcation system for eukaryotic transposable elements. Nature Rev Genet 8:973-982.
-
(2007)
Nature Rev Genet
, vol.8
, pp. 973-982
-
-
Wicker, T.1
Sabot, F.2
Hua-Van, A.3
Bennetzen, J.L.4
Capy, P.5
Chalhoub, B.6
Flavell, A.7
Leroy, P.8
Morgante, M.9
Panaud, O.10
Paux, E.11
Sanmiguel, P.12
Schulman, A.H.13
-
156
-
-
64749083939
-
PiggyBac transposition repro-grams fbroblasts to induced pluripotent stem cells
-
Woltjen K, Michael IP, Mohseni P, Desai R, Mileikovsky M, Hämäläinen R, Cowling R, Wang W, Liu P, Gertsenstein M, Kaji K, Sung H and Nagy A. 2009. piggyBac transposition repro-grams fbroblasts to induced pluripotent stem cells. Nature 458:766-770.
-
(2009)
Nature
, vol.458
, pp. 766-770
-
-
Woltjen, K.1
Michael, I.P.2
Mohseni, P.3
Desai, R.4
Mileikovsky, M.5
Hämäläinen, R.6
Cowling, R.7
Wang, W.8
Liu, P.9
Gertsenstein, M.10
Kaji, K.11
Sung, H.12
Nagy, A.13
-
157
-
-
33750060436
-
PiggyBac is a fexible and highly active transposon as compared to Sleeping Beauty,Tol2, and Mos1 in mammalian cells
-
Wu SC, Meir YJ, Coates CJ, Handler AM, Pelczar P, Moisyadi S and Kaminski JM. 2006. piggyBac is a fexible and highly active transposon as compared to Sleeping Beauty, Tol2, and Mos1 in mammalian cells. Proc Natl Acad Sci USA 103:15008-15013.
-
(2006)
Proc Natl Acad Sci USA
, vol.103
, pp. 15008-15013
-
-
Wu, S.C.1
Meir, Y.J.2
Coates, C.J.3
Handler, A.M.4
Pelczar, P.5
Moisyadi, S.6
Kaminski, J.M.7
-
158
-
-
0028034518
-
Characterization of a region in phage Mu transposase that is involved in interaction with the Mu B protein
-
Wu Z and Chaconas G. 1994. Characterization of a region in phage Mu transposase that is involved in interaction with the Mu B protein. J Biol Chem 269: 28829-28833.
-
(1994)
J Biol Chem
, vol.269
, pp. 28829-28833
-
-
Wu, Z.1
Chaconas, G.2
-
159
-
-
0029643952
-
Recombining the structures of HIV inte-grase, RuvC and RNase H
-
Yang W and Steitz TA. 1995. Recombining the structures of HIV inte-grase, RuvC and RNase H. Struct 3:131-134.
-
(1995)
Struct
, vol.3
, pp. 131-134
-
-
Yang, W.1
Steitz, T.A.2
-
160
-
-
0025129937
-
Structure of ribonuclease H phased at 2 Å resolution by MAD analysis of the selenomethionyl protein
-
Yang W, Hendrickson WA, Crouch RJ and Satow Y. 1990. Structure of ribonuclease H phased at 2 Å resolution by MAD analysis of the selenomethionyl protein. Science 249:1398-1405.
-
(1990)
Science
, vol.249
, pp. 1398-1405
-
-
Yang, W.1
Hendrickson, W.A.2
Crouch, R.J.3
Satow, Y.4
-
161
-
-
66149096706
-
Structure of the RAG1 nonamer binding domain with DNA reveals a dimer that mediates DNA synapsis
-
Yin FF, Bailey S, Innis CA, Clubotaru M, Kamtekar S, Steitz TA and Schatz DG. 2009. Structure of the RAG1 nonamer binding domain with DNA reveals a dimer that mediates DNA synapsis. Nature Struct Mol Biol 16:499-508.
-
(2009)
Nature Struct Mol Biol
, vol.16
, pp. 499-508
-
-
Yin, F.F.1
Bailey, S.2
Innis, C.A.3
Clubotaru, M.4
Kamtekar, S.5
Steitz, T.A.6
Schatz, D.G.7
-
162
-
-
17044421342
-
3D reconstruction of the Mu transposase and the Type i transpososome: A structural framework for Mu DNA transposition
-
Yuan JF, Beniac DR, Chaconas G and Ottensmeyer FP. 2005. 3D reconstruction of the Mu transposase and the Type I transpososome: a structural framework for Mu DNA transposition. Genes Dev 19:840-852.
-
(2005)
Genes Dev
, vol.19
, pp. 840-852
-
-
Yuan, J.F.1
Beniac, D.R.2
Chaconas, G.3
Ottensmeyer, F.P.4
-
163
-
-
0035940510
-
P instability factor: An active maize transposon system associated with the amplifcation of Tourist-like MITEs and a new superfamily of transposases
-
Zhang X, Feschotte C, Zhang Q, Jiang N, Eggleston WB and Wessler SR. 2001. P instability factor: An active maize transposon system associated with the amplifcation of Tourist-like MITEs and a new superfamily of transposases. Proc Natl Acad Sci USA 98:12572-12577.
-
(2001)
Proc Natl Acad Sci USA
, vol.98
, pp. 12572-12577
-
-
Zhang, X.1
Feschotte, C.2
Zhang, Q.3
Jiang, N.4
Eggleston, W.B.5
Wessler, S.R.6
-
164
-
-
39449115394
-
I-TASSER server for protein 3D structure prediction
-
Zhang Y. 2008. I-TASSER server for protein 3D structure prediction. BMC Bioinform 9:40.
-
(2008)
BMC Bioinform
, vol.9
, pp. 40
-
-
Zhang, Y.1
-
165
-
-
11144245992
-
Transposition of hAT elements links transposable elements and V(D) J recombination
-
Zhou L, Mitra R, Hickman AB, Dyda F and Craig NL. 2004. Transposition of hAT elements links transposable elements and V(D)J recombination. Nature 432:995-1001.
-
(2004)
Nature
, vol.432
, pp. 995-1001
-
-
Zhou, L.1
Mitra, R.2
Hickman, A.B.3
Dyda, F.4
Craig, N.L.5
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