Structure and evolution of the hAT transposon superfamily

Genetics

Volumn 158, Issue 3, 2001, Pages 949-957

  Rubin, Eitan ^a,b   Lithwick, Gila ^a   Levy, Avraham A ^a  

^a WEIZMANN INSTITUTE OF SCIENCE   (Israel)

^b Compugen Ltd ^*  (Israel)

Author keywords

[No Author keywords available]

Indexed keywords

CELL PROTEIN; DNA; PROTEIN AC; PROTEIN HAT; PROTEIN HOBO; PROTEIN TAM3; TRANSPOSASE; UNCLASSIFIED DRUG;

ARTICLE; CHEMICAL STRUCTURE; DATA BASE; DNA RESPONSIVE ELEMENT; DROSOPHILA; GENE TRANSFER; LONG TERMINAL REPEAT; MAIZE; MOLECULAR EVOLUTION; NONHUMAN; PHYLOGENY; PLANT; PRIORITY JOURNAL; PROTEIN FAMILY; SEQUENCE ANALYSIS; TRANSPOSON;

BASE SEQUENCE; DATABASE MANAGEMENT SYSTEMS; DNA; DNA TRANSPOSABLE ELEMENTS; EVOLUTION, MOLECULAR; PHYLOGENY; SEQUENCE ANALYSIS, DNA; SEQUENCE HOMOLOGY, NUCLEIC ACID; TRANSPOSASES; ZEA MAYS;

ANIMALIA; ANTIRRHINUM MAJUS; EMBRYOPHYTA; FUNGI; ZEA MAYS;

EID: 0034913514     PISSN: 00166731     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (32)

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2. Clustering gene expression patterns
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4. Evidence for a common evolutionary origin of inverted repeat transposons in Drosophila and plants: Hobo, activator and Tam3
5. The hermit transposable element of the Australian blowfly, Lucilia cuprina, belongs to the hAT family of transposable elements
6. Extensive, nonrandom diversity of excision footprints generated by Ds-like transposon ascot-1 suggests new parallels with V(D)J recombination
7. A highly conserved domain of the maize activator transposase is involved in dimerization
8. The ORFa protein, the putative transposase of maize transposable element Ac, has a basic DNA binding domain
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14. Automated construction and graphical presentation of protein blocks from unaligned sequences
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19. Dominant transposition-deficient mutants of maize Activator (Ac) transposase
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21. DIALIGN: Finding local similarities by multiple sequence alignment
22. The transposable element Tam1 from Antirrhinum majus shows homology to the maize transposon En/Spm and has no sequence specificity of insertion
23. Tfo1: An Ac-like transposon from the plant pathogenic fungus Fusarium oxysporum
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26. Sequence logos: A new way to display consensus sequences
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29. PATMAT: A searching and extraction program for sequence, pattern and block queries and databases
30. The Hermes transposable element from the house fly, Musca domestica, is a short inverted repeat-type element of the hobo, Ac, and Tam3 (hAT) element family
31. The Australian bushfly Musca-vetustissima contains a sequence related to transposons of the Hobo, AC, and Tam3 family
32. Origin and evolution of retroelements based upon their reverse transcriptase sequences