Playing second fiddle: Second-strand processing and liberation of transposable elements from donor DNA

Trends in Microbiology

Volumn 8, Issue 6, 2000, Pages 268-274

  Turlan, Catherine ^a   Chandler, Michael ^a  

^a CNRS   (France)

Author keywords

[No Author keywords available]

Indexed keywords

TRANSPOSASE;

DNA BINDING; DNA STRAND; DNA TRANSPOSITION; ENZYME ACTIVITY; GENE INSERTION; GENE TRANSLOCATION; GENETIC TRANSCRIPTION; PRIORITY JOURNAL; REACTION ANALYSIS; RETROVIRUS; REVIEW; STEREOSPECIFICITY; TRANSPOSON;

ANIMALS; DNA TRANSPOSABLE ELEMENTS; DNA, COMPLEMENTARY; DNA-BINDING PROTEINS; EUKARYOTIC CELLS; HUMANS; INTEGRASES; PROKARYOTIC CELLS; RECOMBINATION, GENETIC; RETROVIRIDAE; TRANSCRIPTION, GENETIC; TRANSPOSASES;

EID: 0034213049     PISSN: 0966842X     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0966-842X(00)01757-1     Document Type: Review

References (44)

1. Berg D.E., Howe M.M. Mobile DNA. 1989;ASM Press.
2. Scott J.R., Churchward G.G. Conjugative transposition. Annu. Rev. Microbiol. 49:1995;367-397.
3. Mendiola M.V.et al. Differential roles of the transposon termini in IS91 transposition. Proc. Natl. Acad. Sci. U. S. A. 91:1994;1922-1926.
4. Rice P.et al. Retroviral integrases and their cousins. Curr. Opin. Struct. Biol. 6:1996;76-83.
5. Grindley N.D., Leschziner A.E. DNA transposition: from a black box to a color monitor. Cell. 83:1995;1063-1066.
6. Davies D.R.et al. The 3 dimensional structure of a Tn5 transposase-related protein determined to 2.9 Å resolution. J. Biol. Chem. 274:1999;11904-11913.
7. Haren L.et al. Integrating DNA: transposases and retroviral integrases. Annu. Rev. Microbiol. 53:1999;245-281.
8. Mizuuchi K. Polynucleotidyl transfer reactions in site-specific DNA recombination. Genes Cells. 2:1997;1-12.
9. Craig N.L. Transposition. Neidhardt F.C.et al. Escherichia coli and Salmonella. 1996;2339-2362 ASM Press.
10. Craig N.L. Transposon Tn7. Curr. Top. Microbiol. Immunol. 204:1996;27-48.
11. Kleckner N.et al. Tn10 and IS10 transposition and chromosome rearrangements : mechanisms and regulation in vivo and in vitro. Saedler H., Gierl A. Transposable Elements. 1996;49-82 Springer.
12. Reznikoff W.S. The Tn5 transposon. Annu. Rev. Microbiol. 47:1993;945-963.
13. Polard P.et al. IS911-mediated transpositional recombination in vitro. J. Mol. Biol. 264:1996;68-81.
14. Sekine Y.et al. Linearization and transposition of circulated molecules of insertion sequence IS3. J. Mol. Biol. 294:1999;21-34.
15. Lewis L.A., Grindley N.D. Two abundant intramolecular transposition products resulting from reactions initiated at a single end suggest that IS2 transposases by an unconventional pathway. Mol. Microbiol. 25:1997;517-529.
16. Mizuuchi K., Adzuma K. Inversion of the phosphate chirality at the target sites of Mu DNA strand transfer: evidence for a one-step transesterification mechanisms. Cell. 66:1991;129-140.
17. Engelman A.et al. HIV-1 DNA integration: mechanisms of viral DNA cleavage and DNA strand transfer. Cell. 67:1991;1211-1221.
18. van Gent D.C.et al. Similarities between initiation of V(D)J recombination and retroviral integration. Science. 271:1996;1592-1594.
19. May E.W., Craig N.L. Switching from cut-and-paste to replicative Tn7 transposition. Science. 272:1996;401-404.
20. Sarnovsky R.J.et al. The Tn7 transposase is a heteromeric complex in which DNA breakage and joining activities are distributed between different gene products. EMBO J. 15:1996;6348-6361.
21. Bolland S., Kleckner N. The 3 chemical steps of Tn10/IS10 transposition involve repeated utilization of a single active site. Cell. 84:1996;223-233.
22. Bolland S., Kleckner N. The two single-strand cleavages at each end of Tn10 occur in a specific order during transposition. Proc. Natl. Acad. Sci. U. S. A. 92:1995;7814-7818.
23. Kennedy A.K.et al. Tn10 transposition via a DNA hairpin intermediate. Cell. 95:1998;125-134.
24. Bhasin A.et al. Hairpin formation in Tn5 transposition. J. Biol. Chem. 274:1999;37021-37029.
25. Gerton J.L.et al. Stereospecificity of reactions catalysed by HIV-1 integrase. J. Biol. Chem. 274:1999;33480-33487.
26. Atkinson P.W.et al. The hobo transposable element of Drosophila can be crossmobilized in house flies and excises like the Ac element of maize. Proc. Natl. Acad. Sci. U. S. A. 90:1993;9693-9697.
27. Coen E.S.et al. Consequences and mechanisms of transposition in antirrhinum-magus. Berg D., Howe M. Mobile DNA. 1989;413-436 ASM Press.
28. Colot V.et al. Extensive, non-random diversity of excision footprints generated by Ds-like transposon Ascot-1 suggests new parallels with V(D)J recombination. Mol. Cell Biol. 18:1998;4337-4346.
29. Jones J.M., Nakai H. Duplex opening by chromosome protein PriA for replisome assembly on a recombination intermediate. J. Mol. Biol. 289:1999;503-516.
30. Kogoma T. Stable DNA replication: interplay between DNA replication, homologous recombinations and transcription. Microbiol. Mol. Biol. Rev. 61:1997;212-238.
31. Kuzminov A. Recombinational repair of DNA damage in Escherichia coli and bacteriophage λ Microbiol. Mol. Biol. Rev. 63:1999;751-813.
32. Haas D.et al. Insertion sequence IS21: related insertion sequence elements, transpositional mechanisms, and application to linker insertion mutagenesis. Nakazawa T. Molecular Biology of Pseudomonads. 1996;238-249 ASM Press.
33. Kiss J., Olasz F. Formation and transposition of the covalently closed IS30 circle: the relation between tandem dimers and monomeric circles. Mol. Microbiol. 34:1999;37-52.
34. Lyon B.R.et al. Detection and characterization of IS256, an insertion sequence in Staphylococcus aureus. J. Gen. Microbiol. 133:1987;3031-3038.
35. Brown P.O. Integration. Coffin J.M.et al. Retroviruses. 1997;161-203 Cold Spring Harbor Laboratory Press.
36. Doak T.G.et al. A proposed superfamily of transposase genes: transposon-like elements in ciliated protozoa and a common 'D35E'-motif. Proc. Natl. Acad. Sci. U. S. A. 91:1994;942-946.
37. Mahillon J., Chandler M. Insertion sequences. Microbiol. Mol. Biol. Rev. 62:1998;725-774.
38. Plasterk R.H.et al. Resident aliens: the Tc1/mariner superfamily of transposable elements. Trends Genet. 15:1999;326-332.
39. van Luenen H.G.et al. The mechanism of transposition of Tc3 in C. elegans. Cell. 79:1994;293-301.
40. Lampe D.J.et al. A purified mariner transposase is sufficient to mediate transposition in vitro. EMBO J. 15:1996;5470-5479.
41. Beall E.L., Rio D.C. Drosophila P-element transposase is a novel site-specific endonuclease. Genes Dev. 11:1997;2137-2151.
42. Morisato D., Kleckner N. Transposase promotes double-strand breaks and single-strand joins at Tn10 termini in vivo. Cell. 39:1984;181-190.
43. Morisato D., Kleckner N. Tn10 transposition and circle formation in vitro. Cell. 51:1987;101-111.
44. Kennedy A.K.et al. Single active site catalysis of the successive phosphoryl transfer steps by DNA transposases: insights from phosphothioate stereoselectivity. Cell. 101:2000;295-305.